tanghaibao /
goatools
| 2 added classes/operations | |||
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B | _get_data0() added | |
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A | _get_altids() added | |
| 6 added classes/operations | |||
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C | test_go_pools() added | |
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A | _Run.get_goids_rand() added | |
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A | _Run.get_gosubdag_r1() added | |
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A | _Run.get_gosubdag_r0() added | |
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A | _Run.str_stats() added | |
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A | _Run.prt_cnts() added | |
| 1 added class/operation | |||
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A | test_grouper_d2() added | |
| 1 added class/operation | |||
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A | _WrHierPrt._init_prtfmt() added | |
| D | ↗ | B | test_gpad_read() improved |
| F | ↗ | C | GODag.make_graph_pygraphviz() improved |
| F | ↗ | C | _WrHierPrt.prt_hier_rec() improved |
| D | ↗ | B | _test_path_bp_mf() improved |
| D | ↗ | B | GOEnrichmentRecord.get_field_values() improved |
| D | ↗ | B | GpadReader.read_gpad() improved |
| D | ↗ | B | GoPaths.get_paths_from_to() improved |
| F | ↗ | C | GoSearch.get_matching_gos() improved |
| C | ↗ | B | GODag.load_obo_file() improved |
| D | ↗ | B | wr_xlsx_sections() improved |
| view all | |||
| 1 added class/operation | |||
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B | GetGOs._add_all_leafs() added | |
| D | ↗ | B | GetGOs.get_go_color() improved |
| 1 added class/operation | |||
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A | GetGOs._add_gochildleaf() added | |
| A | ↘ | B | PlotCli.get_outfile() got worse |
| 7 added classes/operations | |||
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A | _Run.__init__() added | |
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A | test_plot_part_of() added | |
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A | _Run.get_obo_name() added | |
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A | _Run.wr_subobo() added | |
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B | _Run.plot_all() added | |
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A | test_get_parent() added | |
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A | _Run added | |
| 248 added classes/operations | |||
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F | Go2Color.init_goid2color() added | |
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F | GoeaResults._get_item_str() added | |
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F | InitFields.get_prt_fmt() added | |
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F | _WrHierPrt.prt_hier_rec() added | |
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F | InitFields._get_go2nt_all() added | |
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F | GoNode.get_hdr() added | |
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C | EdgesRelatives added | |
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D | GetGOs.get_go_color() added | |
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D | GoPaths.get_paths_from_to() added | |
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F | ShortenText.get_short_plot_name() added | |
| A | ↘ | C | run() got worse |
| view all | |||
| 2 added classes/operations | |||
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B | _run() added | |
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A | MgrNtGOEAs.get_nts_strpval() added | |
| 7 added classes/operations | |||
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A | MgrNts.add_f2str() added | |
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A | MgrNts.init_dicts() added | |
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A | MgrNts.get_ntobj() added | |
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A | MgrNts.mknts() added | |
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A | MgrNts.get_set() added | |
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A | MgrNts.__init__() added | |
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A | MgrNts added | |
| 4 added classes/operations | |||
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A | MgrNtGOEAs.mknts() added | |
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A | MgrNtGOEAs.get_ntobj() added | |
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A | MgrNtGOEAs.init_dicts() added | |
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A | MgrNtGOEAs.add_f2str() added | |
| C | ↗ | B | GOEnrichmentStudy.get_pval_uncorr() improved |
| A | ↘ | B | FisherScipyStats.calc_pvalue() got worse |
| B | ↘ | C | GOEnrichmentStudy.get_pval_uncorr() got worse |
| 7 added classes/operations | |||
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F | MgrNtGOEAs.get_goea_nts_all() added | |
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A | MgrNtGOEAs._get_field_values() added | |
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A | MgrNtGOEAs.get_goea_nts_prt() added | |
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A | MgrNtGOEAs.__init__() added | |
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A | MgrNtGOEAs.get_study_items() added | |
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A | MgrNtGOEAs._get_fieldnames() added | |
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A | MgrNtGOEAs added | |
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Not enabled
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| F Grouper rated critical |
| F test_ipyrelatonships... rated critical |
| F OptionalAttrs.chk_re... rated critical |
| F GODag._set_level_dep... rated critical |
| F OboOptionalAttrs.upd... rated critical |
| F OptionalAttrs rated critical |
| F OptionalAttrs._init_... rated critical |
| F GODagSmallPlot._get_... rated critical |
| F OBOReader.__iter__() rated critical |
| F nopen() rated critical |
| Image URL | |
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| RDOC | |
| AsciiDoc |
