xxdownload_job_and_process.get_parser() - Code Metrics - Inspection of "Add files via upload" - mmagnus/rna-tools - Measure and Improve Code Quality continuously with Scrutinizer

Passed

Push — master ( a47e0a...19735b )

by Marcin

created 2021-07-10 16:49 UTC

xxdownload_job_and_process.get_parser() A

↳ Parent: xxdownload_job_and_process

Complexity

Conditions

Size

Total Lines	12
Code Lines	9

Duplication

Lines	12
Ratio	100 %

Importance

Changes

Metric	Value
cc	1
eloc	9
nop	0
dl	12
loc	12
rs	9.95
c	0
b	0
f	0

#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Caution: the file was changed, it does not download now from simrnaweb.
"""
from __future__ import print_function
import os

import argparse

def get_parser():

    parser = argparse.ArgumentParser(
        description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter)

    #parser.add_argument('-', "--", help="", default="")

    parser.add_argument("-v", "--verbose",
                        action="store_true", help="be verbose")
    parser.add_argument('--dir', action="store_false")
    parser.add_argument("rna", help="", default="evox.py -c ade")
    parser.add_argument("simrnawebid", help="", default="")
    return parser


if __name__ == '__main__':
    parser = get_parser()
    args = parser.parse_args()

    dir = 'simrna_' + args.simrnawebid
    os.system('mkdir  ' + dir)
    os.chdir(dir)
    #os.system('rna_simrnaweb_download_job.py --prefix tar --web-models ' + args.simrnawebid)
    #os.system('rna_simrnaweb_download_job.py  -n 200 --web-models -w ' + args.simrnawebid)
    os.system('mkdir reps')
    #os.system('mkdir reps_ns')
    os.system('cp *.pdb reps')
    #os.system('cp *.pdb reps_ns')
    os.system('evox.py -c ' + args.rna)


1		#!/usr/bin/env python
2		# -- coding: utf-8 --
3		"""
4		Caution: the file was changed, it does not download now from simrnaweb.
5		"""
6		from __future__ import print_function
7		import os
8
9		import argparse
10
11	View Code Duplication	def get_parser():
		0 ignored issues – show Duplication introduced 2020-06-29 19:56 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
12		parser = argparse.ArgumentParser(
13		description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter)
14
15		#parser.add_argument('-', "--", help="", default="")
16
17		parser.add_argument("-v", "--verbose",
18		action="store_true", help="be verbose")
19		parser.add_argument('--dir', action="store_false")
20		parser.add_argument("rna", help="", default="evox.py -c ade")
21		parser.add_argument("simrnawebid", help="", default="")
22		return parser
23
24
25		if __name__ == '__main__':
26		parser = get_parser()
27		args = parser.parse_args()
28
29		dir = 'simrna_' + args.simrnawebid
30		os.system('mkdir ' + dir)
31		os.chdir(dir)
32		#os.system('rna_simrnaweb_download_job.py --prefix tar --web-models ' + args.simrnawebid)
33		#os.system('rna_simrnaweb_download_job.py -n 200 --web-models -w ' + args.simrnawebid)
34		os.system('mkdir reps')
35		#os.system('mkdir reps_ns')
36		os.system('cp *.pdb reps')
37		#os.system('cp *.pdb reps_ns')
38		os.system('evox.py -c ' + args.rna)
39

mmagnus / rna-tools

Push — master ( a47e0a...19735b )

xxdownload_job_and_process.get_parser() A

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