Passed
Push — master ( ce1e09...b2ca54 )
by Jonathan
05:06
created
src/Webtrees/Module/Sosa/SosaStatsController.php 2 patches
Indentation   +236 added lines, -236 removed lines patch added patch discarded remove patch
@@ -28,279 +28,279 @@
 block discarded – undo
28 28
  */
29 29
 class SosaStatsController extends MvcController
30 30
 {
31
-    /**
32
-     * Sosa Provider for the controller
33
-     * @var SosaProvider $sosa_provider
34
-     */
35
-    protected $sosa_provider;
31
+	/**
32
+	 * Sosa Provider for the controller
33
+	 * @var SosaProvider $sosa_provider
34
+	 */
35
+	protected $sosa_provider;
36 36
     
37
-    /**
38
-     * Constructor for SosaStatsController
39
-     * @param AbstractModule $module
40
-     */
41
-    public function __construct(AbstractModule $module) {
42
-        parent::__construct($module);
37
+	/**
38
+	 * Constructor for SosaStatsController
39
+	 * @param AbstractModule $module
40
+	 */
41
+	public function __construct(AbstractModule $module) {
42
+		parent::__construct($module);
43 43
         
44
-        $this->sosa_provider = new SosaProvider(Globals::getTree(), Auth::user());
45
-    }
44
+		$this->sosa_provider = new SosaProvider(Globals::getTree(), Auth::user());
45
+	}
46 46
     
47
-    /**
48
-     * Pages
49
-     */
47
+	/**
48
+	 * Pages
49
+	 */
50 50
     
51
-    /**
52
-     * SosaStats@index
53
-     */
54
-    public function index() {
55
-        $wt_tree = Globals::getTree();
56
-        $controller = new PageController();
57
-        $controller
58
-            ->setPageTitle(I18N::translate('Sosa Statistics'))
59
-            ->addInlineJavascript('$(".help_tooltip").tooltip();')
60
-        ;
51
+	/**
52
+	 * SosaStats@index
53
+	 */
54
+	public function index() {
55
+		$wt_tree = Globals::getTree();
56
+		$controller = new PageController();
57
+		$controller
58
+			->setPageTitle(I18N::translate('Sosa Statistics'))
59
+			->addInlineJavascript('$(".help_tooltip").tooltip();')
60
+		;
61 61
 
62
-        $view_bag = new ViewBag();
63
-        $view_bag->set('title', $controller->getPageTitle());
64
-        $view_bag->set('is_setup', false);
62
+		$view_bag = new ViewBag();
63
+		$view_bag->set('title', $controller->getPageTitle());
64
+		$view_bag->set('is_setup', false);
65 65
         
66
-        if($this->sosa_provider->isSetup()) {
67
-            $view_bag->set('is_setup', true);
66
+		if($this->sosa_provider->isSetup()) {
67
+			$view_bag->set('is_setup', true);
68 68
             
69
-            $view_bag->set('root_indi', $this->sosa_provider->getRootIndi());
69
+			$view_bag->set('root_indi', $this->sosa_provider->getRootIndi());
70 70
             
71
-            $sosaCount = $this->sosa_provider->getSosaCount();
72
-            $diffSosaCount = $this->sosa_provider->getDifferentSosaCount();
71
+			$sosaCount = $this->sosa_provider->getSosaCount();
72
+			$diffSosaCount = $this->sosa_provider->getDifferentSosaCount();
73 73
             
74
-            $general_stats = array(
75
-                'sosa_count' => $sosaCount,
76
-                'distinct_count' => $diffSosaCount,
77
-                'sosa_rate' => Functions::safeDivision($diffSosaCount, $this->sosa_provider->getTotalIndividuals()),
78
-                'pedi_collapse' => 1 - Functions::safeDivision($diffSosaCount, $sosaCount),
79
-                'mean_gen_time' => $this->sosa_provider->getMeanGenerationTime()
80
-            );
81
-            $view_bag->set('general_stats', $general_stats);
74
+			$general_stats = array(
75
+				'sosa_count' => $sosaCount,
76
+				'distinct_count' => $diffSosaCount,
77
+				'sosa_rate' => Functions::safeDivision($diffSosaCount, $this->sosa_provider->getTotalIndividuals()),
78
+				'pedi_collapse' => 1 - Functions::safeDivision($diffSosaCount, $sosaCount),
79
+				'mean_gen_time' => $this->sosa_provider->getMeanGenerationTime()
80
+			);
81
+			$view_bag->set('general_stats', $general_stats);
82 82
             
83
-            $stats_gen = $this->sosa_provider->getStatisticsByGeneration();
84
-            $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen=');
85
-            $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen=');
83
+			$stats_gen = $this->sosa_provider->getStatisticsByGeneration();
84
+			$view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen=');
85
+			$view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen=');
86 86
             
87
-            $gen_theoretical=1;
88
-            $total_theoretical=0;
89
-            $prev_diff=0;
90
-            $prev_known=0.5;
91
-            $generation_stats = array();
87
+			$gen_theoretical=1;
88
+			$total_theoretical=0;
89
+			$prev_diff=0;
90
+			$prev_known=0.5;
91
+			$generation_stats = array();
92 92
             
93
-            foreach($stats_gen as $gen => $tab){
94
-                $genY1= I18N::translate('-');
95
-                $genY2= I18N::translate('-');
96
-                if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth'];
97
-                if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth'];
98
-                $total_theoretical += $gen_theoretical;
99
-                $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical);
100
-                $missing=2*$prev_known - $tab['sosaCount'];
101
-                $gen_diff=$tab['diffSosaTotalCount']-$prev_diff;
93
+			foreach($stats_gen as $gen => $tab){
94
+				$genY1= I18N::translate('-');
95
+				$genY2= I18N::translate('-');
96
+				if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth'];
97
+				if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth'];
98
+				$total_theoretical += $gen_theoretical;
99
+				$perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical);
100
+				$missing=2*$prev_known - $tab['sosaCount'];
101
+				$gen_diff=$tab['diffSosaTotalCount']-$prev_diff;
102 102
                 
103
-                $generation_stats[$gen] = array(
104
-                    'gen_min_birth' => $genY1,
105
-                    'gen_max_birth' => $genY2,
106
-                    'theoretical' => $gen_theoretical,
107
-                    'known' => $tab['sosaCount'],
108
-                    'perc_known' => $perc_sosa_count_theor,
109
-                    'missing' => $missing,
110
-                    'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known),
111
-                    'total_known' => $tab['sosaTotalCount'],
112
-                    'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical),
113
-                    'different' => $gen_diff,
114
-                    'perc_different' => Functions::safeDivision($gen_diff, $tab['sosaCount']),
115
-                    'total_different' => $tab['diffSosaTotalCount'],
116
-                    'pedi_collapse' => 1 - Functions::safeDivision($tab['diffSosaTotalCount'], $tab['sosaTotalCount'])
117
-                );
103
+				$generation_stats[$gen] = array(
104
+					'gen_min_birth' => $genY1,
105
+					'gen_max_birth' => $genY2,
106
+					'theoretical' => $gen_theoretical,
107
+					'known' => $tab['sosaCount'],
108
+					'perc_known' => $perc_sosa_count_theor,
109
+					'missing' => $missing,
110
+					'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known),
111
+					'total_known' => $tab['sosaTotalCount'],
112
+					'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical),
113
+					'different' => $gen_diff,
114
+					'perc_different' => Functions::safeDivision($gen_diff, $tab['sosaCount']),
115
+					'total_different' => $tab['diffSosaTotalCount'],
116
+					'pedi_collapse' => 1 - Functions::safeDivision($tab['diffSosaTotalCount'], $tab['sosaTotalCount'])
117
+				);
118 118
                 
119
-                $gen_theoretical = $gen_theoretical * 2;
120
-                $prev_known=$tab['sosaCount'];
121
-                $prev_diff=$tab['diffSosaTotalCount'];
122
-            }
119
+				$gen_theoretical = $gen_theoretical * 2;
120
+				$prev_known=$tab['sosaCount'];
121
+				$prev_diff=$tab['diffSosaTotalCount'];
122
+			}
123 123
             
124
-            $view_bag->set('generation_stats', $generation_stats);
124
+			$view_bag->set('generation_stats', $generation_stats);
125 125
             
126
-            $gen_depth_stats = $this->sosa_provider->getGenerationDepthStatsAtGen(1);
127
-            $view_bag->set('mean_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['mean_gen_depth'] : 0);
128
-            $view_bag->set('stddev_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['stddev_gen_depth'] : 0);
126
+			$gen_depth_stats = $this->sosa_provider->getGenerationDepthStatsAtGen(1);
127
+			$view_bag->set('mean_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['mean_gen_depth'] : 0);
128
+			$view_bag->set('stddev_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['stddev_gen_depth'] : 0);
129 129
             
130
-            $view_bag->set('top10multiancestors', $this->getTop10Ancestors());
130
+			$view_bag->set('top10multiancestors', $this->getTop10Ancestors());
131 131
             
132
-            $view_bag->set('chart_img_g2', $this->htmlAncestorDispersionG2());
133
-            $view_bag->set('chart_img_g3', $this->htmlAncestorDispersionG3());
132
+			$view_bag->set('chart_img_g2', $this->htmlAncestorDispersionG2());
133
+			$view_bag->set('chart_img_g3', $this->htmlAncestorDispersionG3());
134 134
             
135
-            $view_bag->set('chart_img_gendepth3', $this->htmlAncestorGenDepthG3());
136
-            //$view_bag->set('mean_gen_depth_gen3_stats', $this->sosa_provider->getMeanGeneratuonDepthAndDeviationAtGen(3));
137
-        }
135
+			$view_bag->set('chart_img_gendepth3', $this->htmlAncestorGenDepthG3());
136
+			//$view_bag->set('mean_gen_depth_gen3_stats', $this->sosa_provider->getMeanGeneratuonDepthAndDeviationAtGen(3));
137
+		}
138 138
         
139
-        ViewFactory::make('SosaStats', $this, $controller, $view_bag)->render();   
140
-    }
139
+		ViewFactory::make('SosaStats', $this, $controller, $view_bag)->render();   
140
+	}
141 141
     
142
-    /**
143
-     * Return an array of the top 10 of ancestor appearing multiple times, grouped by the number of occurrences.
144
-     * The key is the number of appearance, and the value contains the list of Inidvidual
145
-     * 
146
-     * @return array Top 10 ancestors with count
147
-     */
148
-    private function getTop10Ancestors()
149
-    {
150
-        $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10);
151
-        $top10ancestors = array();
152
-        if($top10multiancestors !== null && count($top10multiancestors)) {
153
-            foreach($top10multiancestors as $pid => $count) {
154
-                $indi = Individual::getInstance($pid, $this->sosa_provider->getTree());
155
-                if($indi !== null && $indi->canShowName()) {
156
-                    array_key_exists($count, $top10ancestors) ?
157
-                        $top10ancestors[$count][] = $indi:
158
-                        $top10ancestors[$count] = array($count => $indi);
159
-                }
160
-            }
161
-        }
162
-        return $top10ancestors;
163
-    }
142
+	/**
143
+	 * Return an array of the top 10 of ancestor appearing multiple times, grouped by the number of occurrences.
144
+	 * The key is the number of appearance, and the value contains the list of Inidvidual
145
+	 * 
146
+	 * @return array Top 10 ancestors with count
147
+	 */
148
+	private function getTop10Ancestors()
149
+	{
150
+		$top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10);
151
+		$top10ancestors = array();
152
+		if($top10multiancestors !== null && count($top10multiancestors)) {
153
+			foreach($top10multiancestors as $pid => $count) {
154
+				$indi = Individual::getInstance($pid, $this->sosa_provider->getTree());
155
+				if($indi !== null && $indi->canShowName()) {
156
+					array_key_exists($count, $top10ancestors) ?
157
+						$top10ancestors[$count][] = $indi:
158
+						$top10ancestors[$count] = array($count => $indi);
159
+				}
160
+			}
161
+		}
162
+		return $top10ancestors;
163
+	}
164 164
         
165
-    /**
166
-     * Returns HTML code for a graph showing the dispersion of ancestors across father & mother
167
-     * @return string HTML code
168
-     */
169
-     private function htmlAncestorDispersionG2()
170
-    {
171
-        $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2);
172
-        if(count($ancestorsDispGen2) == 0) return;
165
+	/**
166
+	 * Returns HTML code for a graph showing the dispersion of ancestors across father & mother
167
+	 * @return string HTML code
168
+	 */
169
+	 private function htmlAncestorDispersionG2()
170
+	{
171
+		$ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2);
172
+		if(count($ancestorsDispGen2) == 0) return;
173 173
         
174
-        $size = '600x300';
174
+		$size = '600x300';
175 175
         
176
-        $total = array_sum($ancestorsDispGen2);
177
-        $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0;
178
-        $father = array (
179
-            'color' => '84beff', 
180
-            'count' => $father_count, 
181
-            'perc' => Functions::safeDivision($father_count, $total), 
182
-            'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat')            
183
-        );
184
-        $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0;
185
-        $mother = array (
186
-            'color' => 'ffd1dc', 
187
-            'count' => $mother_count, 
188
-            'perc' => Functions::safeDivision($mother_count, $total),
189
-            'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot')
190
-        );
191
-        $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
192
-        $shared = array (
193
-            'color' => '777777', 
194
-            'count' => $shared_count, 
195
-            'perc' => Functions::safeDivision($shared_count, $total),
196
-            'name' => I18N::translate('Shared')
197
-        );
176
+		$total = array_sum($ancestorsDispGen2);
177
+		$father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0;
178
+		$father = array (
179
+			'color' => '84beff', 
180
+			'count' => $father_count, 
181
+			'perc' => Functions::safeDivision($father_count, $total), 
182
+			'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat')            
183
+		);
184
+		$mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0;
185
+		$mother = array (
186
+			'color' => 'ffd1dc', 
187
+			'count' => $mother_count, 
188
+			'perc' => Functions::safeDivision($mother_count, $total),
189
+			'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot')
190
+		);
191
+		$shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
192
+		$shared = array (
193
+			'color' => '777777', 
194
+			'count' => $shared_count, 
195
+			'perc' => Functions::safeDivision($shared_count, $total),
196
+			'name' => I18N::translate('Shared')
197
+		);
198 198
         
199
-        $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc']));
200
-        $chart_title = I18N::translate('Known Sosa ancestors\' dispersion');
201
-        $chl = 
202
-             $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' .
203
-             $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' .
204
-             $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1);
205
-        return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$father['color']},{$shared['color']},{$mother['color']}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
206
-    }
199
+		$chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc']));
200
+		$chart_title = I18N::translate('Known Sosa ancestors\' dispersion');
201
+		$chl = 
202
+			 $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' .
203
+			 $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' .
204
+			 $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1);
205
+		return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$father['color']},{$shared['color']},{$mother['color']}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
206
+	}
207 207
     
208
-    /**
209
-     * Returns HTML code for a graph showing the dispersion of ancestors across grand-parents
210
-     * @return string HTML code
211
-     */
212
-    private function htmlAncestorDispersionG3()
213
-    {
214
-        $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(3);
208
+	/**
209
+	 * Returns HTML code for a graph showing the dispersion of ancestors across grand-parents
210
+	 * @return string HTML code
211
+	 */
212
+	private function htmlAncestorDispersionG3()
213
+	{
214
+		$ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(3);
215 215
         
216
-        $size = '700x300';
216
+		$size = '700x300';
217 217
         
218
-        $color_motmot = 'ffd1dc';
219
-        $color_motfat = 'b998a0';
220
-        $color_fatfat = '577292';
221
-        $color_fatmot = '84beff';
222
-        $color_shared = '777777';
218
+		$color_motmot = 'ffd1dc';
219
+		$color_motfat = 'b998a0';
220
+		$color_fatfat = '577292';
221
+		$color_fatmot = '84beff';
222
+		$color_shared = '777777';
223 223
     
224
-        $total_fatfat = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0;
225
-        $total_fatmot = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0;
226
-        $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0;
227
-        $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0;
228
-        $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
229
-        $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha;
224
+		$total_fatfat = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0;
225
+		$total_fatmot = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0;
226
+		$total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0;
227
+		$total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0;
228
+		$total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
229
+		$total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha;
230 230
     
231
-        $chd = $this->arrayToExtendedEncoding(array(
232
-	    4095 * Functions::safeDivision($total_fatfat, $total), 
233
-            4095 * Functions::safeDivision($total_fatmot, $total),
234
-            4095 * Functions::safeDivision($total_sha, $total), 
235
-            4095 * Functions::safeDivision($total_motfat, $total),
236
-            4095 * Functions::safeDivision($total_motmot, $total)          
237
-        ));
238
-        $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3');
239
-        $chl =
240
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' .
241
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' .
242
-            I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' .
243
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' .
244
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1);
245
-         return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
246
-    }    
231
+		$chd = $this->arrayToExtendedEncoding(array(
232
+		4095 * Functions::safeDivision($total_fatfat, $total), 
233
+			4095 * Functions::safeDivision($total_fatmot, $total),
234
+			4095 * Functions::safeDivision($total_sha, $total), 
235
+			4095 * Functions::safeDivision($total_motfat, $total),
236
+			4095 * Functions::safeDivision($total_motmot, $total)          
237
+		));
238
+		$chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3');
239
+		$chl =
240
+			\Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' .
241
+			\Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' .
242
+			I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' .
243
+			\Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' .
244
+			\Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1);
245
+		 return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
246
+	}    
247 247
     
248
-    /**
249
-     * Returns HTML code for a graph showing the grand-parents' mean generation depth and standard deviation
250
-     * @return string HTML code
251
-     */
252
-    private function htmlAncestorGenDepthG3() {
253
-        $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3);
254
-        if(count($ancestorsGenDepth3) == 0) return;
248
+	/**
249
+	 * Returns HTML code for a graph showing the grand-parents' mean generation depth and standard deviation
250
+	 * @return string HTML code
251
+	 */
252
+	private function htmlAncestorGenDepthG3() {
253
+		$ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3);
254
+		if(count($ancestorsGenDepth3) == 0) return;
255 255
         
256
-        $ancestors = array();
257
-        $chd_mean = array();
258
-        $chd_error_low = array();
259
-        $chd_error_high = array();
260
-        foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) {
261
-            $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree());
262
-            if($ancestor !== null && $ancestor->canShowName()) {
263
-                $tmp = $ancestor->getAllNames();
264
-                $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']);
265
-            }
266
-            else {
267
-                $ancestors[] = I18N::translate('Sosa %s', I18N::number($sosa));
268
-            }
269
-            $chd_mean[] = $genDepthStat['mean_gen_depth'];
270
-            $chd_error_low[] = max(0, $genDepthStat['mean_gen_depth'] - $genDepthStat['stddev_gen_depth']);
271
-            $chd_error_high[] = $genDepthStat['mean_gen_depth'] + $genDepthStat['stddev_gen_depth'];
272
-        }
256
+		$ancestors = array();
257
+		$chd_mean = array();
258
+		$chd_error_low = array();
259
+		$chd_error_high = array();
260
+		foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) {
261
+			$ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree());
262
+			if($ancestor !== null && $ancestor->canShowName()) {
263
+				$tmp = $ancestor->getAllNames();
264
+				$ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']);
265
+			}
266
+			else {
267
+				$ancestors[] = I18N::translate('Sosa %s', I18N::number($sosa));
268
+			}
269
+			$chd_mean[] = $genDepthStat['mean_gen_depth'];
270
+			$chd_error_low[] = max(0, $genDepthStat['mean_gen_depth'] - $genDepthStat['stddev_gen_depth']);
271
+			$chd_error_high[] = $genDepthStat['mean_gen_depth'] + $genDepthStat['stddev_gen_depth'];
272
+		}
273 273
         
274
-        $maxChd = ceil(max($chd_error_high));
275
-        $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high);
276
-        $chxl = implode('|', array_reverse($ancestors));
277
-        $chbh = 30;
278
-        $chs = count($ancestors) * $chbh + 50;
279
-        $chxl_title = I18N::translate('Mean generation depth and standard deviation');
274
+		$maxChd = ceil(max($chd_error_high));
275
+		$chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high);
276
+		$chxl = implode('|', array_reverse($ancestors));
277
+		$chbh = 30;
278
+		$chs = count($ancestors) * $chbh + 50;
279
+		$chxl_title = I18N::translate('Mean generation depth and standard deviation');
280 280
         
281
-        return "<img src=\"https://chart.googleapis.com/chart?cht=bhs&chco=84beff&chs=600x{$chs}&chbh={$chbh}&chd=t1:{$chd}&chds=0,{$maxChd}&chxt=x,x,y&chxl=1:|{$chxl_title}|2:|{$chxl}&chxp=1,50&chxr=0,0,{$maxChd},1&chm=E,577292,1:2,,2\" />";
282
-    }
281
+		return "<img src=\"https://chart.googleapis.com/chart?cht=bhs&chco=84beff&chs=600x{$chs}&chbh={$chbh}&chd=t1:{$chd}&chds=0,{$maxChd}&chxt=x,x,y&chxl=1:|{$chxl_title}|2:|{$chxl}&chxp=1,50&chxr=0,0,{$maxChd},1&chm=E,577292,1:2,,2\" />";
282
+	}
283 283
 
284
-    /**
285
-     * Convert an array to Google Chart encoding
286
-     * @param arrat $a Array to encode
287
-     * @return string
288
-     */
289
-    private function arrayToExtendedEncoding($a) {
290
-        $xencoding = WT_GOOGLE_CHART_ENCODING;
284
+	/**
285
+	 * Convert an array to Google Chart encoding
286
+	 * @param arrat $a Array to encode
287
+	 * @return string
288
+	 */
289
+	private function arrayToExtendedEncoding($a) {
290
+		$xencoding = WT_GOOGLE_CHART_ENCODING;
291 291
     
292
-        $encoding = '';
293
-        foreach ($a as $value) {
294
-            if ($value < 0) {
295
-                $value = 0;
296
-            }
297
-            $first  = (int) ($value / 64);
298
-            $second = $value % 64;
299
-            $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second];
300
-        }
292
+		$encoding = '';
293
+		foreach ($a as $value) {
294
+			if ($value < 0) {
295
+				$value = 0;
296
+			}
297
+			$first  = (int) ($value / 64);
298
+			$second = $value % 64;
299
+			$encoding .= $xencoding[(int) $first] . $xencoding[(int) $second];
300
+		}
301 301
     
302
-        return $encoding;
303
-    }
302
+		return $encoding;
303
+	}
304 304
     
305 305
     
306 306
 }
307 307
\ No newline at end of file
Please login to merge, or discard this patch.
Spacing   +40 added lines, -41 removed lines patch added patch discarded remove patch
@@ -63,7 +63,7 @@  discard block
 block discarded – undo
63 63
         $view_bag->set('title', $controller->getPageTitle());
64 64
         $view_bag->set('is_setup', false);
65 65
         
66
-        if($this->sosa_provider->isSetup()) {
66
+        if ($this->sosa_provider->isSetup()) {
67 67
             $view_bag->set('is_setup', true);
68 68
             
69 69
             $view_bag->set('root_indi', $this->sosa_provider->getRootIndi());
@@ -84,21 +84,21 @@  discard block
 block discarded – undo
84 84
             $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen=');
85 85
             $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen=');
86 86
             
87
-            $gen_theoretical=1;
88
-            $total_theoretical=0;
89
-            $prev_diff=0;
90
-            $prev_known=0.5;
87
+            $gen_theoretical = 1;
88
+            $total_theoretical = 0;
89
+            $prev_diff = 0;
90
+            $prev_known = 0.5;
91 91
             $generation_stats = array();
92 92
             
93
-            foreach($stats_gen as $gen => $tab){
94
-                $genY1= I18N::translate('-');
95
-                $genY2= I18N::translate('-');
96
-                if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth'];
97
-                if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth'];
93
+            foreach ($stats_gen as $gen => $tab) {
94
+                $genY1 = I18N::translate('-');
95
+                $genY2 = I18N::translate('-');
96
+                if ($tab['firstBirth'] > 0) $genY1 = $tab['firstEstimatedBirth'];
97
+                if ($tab['lastBirth'] > 0) $genY2 = $tab['lastEstimatedBirth'];
98 98
                 $total_theoretical += $gen_theoretical;
99 99
                 $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical);
100
-                $missing=2*$prev_known - $tab['sosaCount'];
101
-                $gen_diff=$tab['diffSosaTotalCount']-$prev_diff;
100
+                $missing = 2 * $prev_known - $tab['sosaCount'];
101
+                $gen_diff = $tab['diffSosaTotalCount'] - $prev_diff;
102 102
                 
103 103
                 $generation_stats[$gen] = array(
104 104
                     'gen_min_birth' => $genY1,
@@ -107,7 +107,7 @@  discard block
 block discarded – undo
107 107
                     'known' => $tab['sosaCount'],
108 108
                     'perc_known' => $perc_sosa_count_theor,
109 109
                     'missing' => $missing,
110
-                    'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known),
110
+                    'perc_missing' => 1 - Functions::safeDivision($tab['sosaCount'], 2 * $prev_known),
111 111
                     'total_known' => $tab['sosaTotalCount'],
112 112
                     'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical),
113 113
                     'different' => $gen_diff,
@@ -117,8 +117,8 @@  discard block
 block discarded – undo
117 117
                 );
118 118
                 
119 119
                 $gen_theoretical = $gen_theoretical * 2;
120
-                $prev_known=$tab['sosaCount'];
121
-                $prev_diff=$tab['diffSosaTotalCount'];
120
+                $prev_known = $tab['sosaCount'];
121
+                $prev_diff = $tab['diffSosaTotalCount'];
122 122
             }
123 123
             
124 124
             $view_bag->set('generation_stats', $generation_stats);
@@ -149,13 +149,12 @@  discard block
 block discarded – undo
149 149
     {
150 150
         $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10);
151 151
         $top10ancestors = array();
152
-        if($top10multiancestors !== null && count($top10multiancestors)) {
153
-            foreach($top10multiancestors as $pid => $count) {
152
+        if ($top10multiancestors !== null && count($top10multiancestors)) {
153
+            foreach ($top10multiancestors as $pid => $count) {
154 154
                 $indi = Individual::getInstance($pid, $this->sosa_provider->getTree());
155
-                if($indi !== null && $indi->canShowName()) {
155
+                if ($indi !== null && $indi->canShowName()) {
156 156
                     array_key_exists($count, $top10ancestors) ?
157
-                        $top10ancestors[$count][] = $indi:
158
-                        $top10ancestors[$count] = array($count => $indi);
157
+                        $top10ancestors[$count][] = $indi : $top10ancestors[$count] = array($count => $indi);
159 158
                 }
160 159
             }
161 160
         }
@@ -169,27 +168,27 @@  discard block
 block discarded – undo
169 168
      private function htmlAncestorDispersionG2()
170 169
     {
171 170
         $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2);
172
-        if(count($ancestorsDispGen2) == 0) return;
171
+        if (count($ancestorsDispGen2) == 0) return;
173 172
         
174 173
         $size = '600x300';
175 174
         
176 175
         $total = array_sum($ancestorsDispGen2);
177 176
         $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0;
178
-        $father = array (
177
+        $father = array(
179 178
             'color' => '84beff', 
180 179
             'count' => $father_count, 
181 180
             'perc' => Functions::safeDivision($father_count, $total), 
182 181
             'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat')            
183 182
         );
184 183
         $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0;
185
-        $mother = array (
184
+        $mother = array(
186 185
             'color' => 'ffd1dc', 
187 186
             'count' => $mother_count, 
188 187
             'perc' => Functions::safeDivision($mother_count, $total),
189 188
             'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot')
190 189
         );
191 190
         $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
192
-        $shared = array (
191
+        $shared = array(
193 192
             'color' => '777777', 
194 193
             'count' => $shared_count, 
195 194
             'perc' => Functions::safeDivision($shared_count, $total),
@@ -199,10 +198,10 @@  discard block
 block discarded – undo
199 198
         $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc']));
200 199
         $chart_title = I18N::translate('Known Sosa ancestors\' dispersion');
201 200
         $chl = 
202
-             $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' .
203
-             $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' .
204
-             $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1);
205
-        return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$father['color']},{$shared['color']},{$mother['color']}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
201
+             $father['name'].' - '.I18N::percentage($father['perc'], 1).'|'.
202
+             $shared['name'].' - '.I18N::percentage($shared['perc'], 1).'|'.
203
+             $mother['name'].' - '.I18N::percentage($mother['perc'], 1);
204
+        return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$father['color']},{$shared['color']},{$mother['color']}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />";
206 205
     }
207 206
     
208 207
     /**
@@ -226,7 +225,7 @@  discard block
 block discarded – undo
226 225
         $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0;
227 226
         $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0;
228 227
         $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0;
229
-        $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha;
228
+        $total = $total_fatfat + $total_fatmot + $total_motfat + $total_motmot + $total_sha;
230 229
     
231 230
         $chd = $this->arrayToExtendedEncoding(array(
232 231
 	    4095 * Functions::safeDivision($total_fatfat, $total), 
@@ -237,12 +236,12 @@  discard block
 block discarded – undo
237 236
         ));
238 237
         $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3');
239 238
         $chl =
240
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' .
241
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' .
242
-            I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' .
243
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' .
244
-            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1);
245
-         return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />";
239
+            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat').' - '.I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1).'|'.
240
+            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot').' - '.I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1).'|'.
241
+            I18N::translate('Shared').' - '.I18N::percentage(Functions::safeDivision($total_sha, $total), 1).'|'.
242
+            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat').' - '.I18N::percentage(Functions::safeDivision($total_motfat, $total), 1).'|'.
243
+            \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot').' - '.I18N::percentage(Functions::safeDivision($total_motmot, $total), 1);
244
+         return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&amp;chd=e:{$chd}&amp;chs={$size}&amp;chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&amp;chf=bg,s,ffffff00&amp;chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />";
246 245
     }    
247 246
     
248 247
     /**
@@ -251,15 +250,15 @@  discard block
 block discarded – undo
251 250
      */
252 251
     private function htmlAncestorGenDepthG3() {
253 252
         $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3);
254
-        if(count($ancestorsGenDepth3) == 0) return;
253
+        if (count($ancestorsGenDepth3) == 0) return;
255 254
         
256 255
         $ancestors = array();
257 256
         $chd_mean = array();
258 257
         $chd_error_low = array();
259 258
         $chd_error_high = array();
260
-        foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) {
259
+        foreach ($ancestorsGenDepth3 as $sosa => $genDepthStat) {
261 260
             $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree());
262
-            if($ancestor !== null && $ancestor->canShowName()) {
261
+            if ($ancestor !== null && $ancestor->canShowName()) {
263 262
                 $tmp = $ancestor->getAllNames();
264 263
                 $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']);
265 264
             }
@@ -272,7 +271,7 @@  discard block
 block discarded – undo
272 271
         }
273 272
         
274 273
         $maxChd = ceil(max($chd_error_high));
275
-        $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high);
274
+        $chd = implode(',', $chd_mean).'|'.implode(',', $chd_error_low).'|'.implode(',', $chd_error_high);
276 275
         $chxl = implode('|', array_reverse($ancestors));
277 276
         $chbh = 30;
278 277
         $chs = count($ancestors) * $chbh + 50;
@@ -294,9 +293,9 @@  discard block
 block discarded – undo
294 293
             if ($value < 0) {
295 294
                 $value = 0;
296 295
             }
297
-            $first  = (int) ($value / 64);
296
+            $first  = (int)($value / 64);
298 297
             $second = $value % 64;
299
-            $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second];
298
+            $encoding .= $xencoding[(int)$first].$xencoding[(int)$second];
300 299
         }
301 300
     
302 301
         return $encoding;
Please login to merge, or discard this patch.
src/Webtrees/Module/Sosa/Views/SosaStatsView.php 1 patch
Spacing   +14 added lines, -14 removed lines patch added patch discarded remove patch
@@ -31,11 +31,11 @@  discard block
 block discarded – undo
31 31
 			<?php 
32 32
 			/** @var \Fisharebest\Webtrees\Individual $root_indi */
33 33
 			$root_indi = $this->data->get('root_indi');
34
-			if($root_indi !== null && $root_indi->canShowName()) { ?>
34
+			if ($root_indi !== null && $root_indi->canShowName()) { ?>
35 35
 			<h4 class="center"><?= I18N::translate('%s: %s', I18N::translate('Root individual'), $root_indi->getFullName()); ?><h4>
36 36
 			<?php } ?>
37 37
 			
38
-			<?php  if($this->data->get('is_setup')) {  
38
+			<?php  if ($this->data->get('is_setup')) {  
39 39
 			    $general_stats = $this->data->get('general_stats'); ?>
40 40
 			<h3><?php echo I18N::translate('General statistics'); ?></h3>
41 41
 			<div class="maj-table">
@@ -57,7 +57,7 @@  discard block
 block discarded – undo
57 57
 				</div>
58 58
 				<div class="maj-row">
59 59
 					<div class="label"><?php echo I18N::translate('Generation mean duration'); ?></div>
60
-					<div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'],  I18N::number($general_stats['mean_gen_time'], 1)); ?></div>
60
+					<div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'], I18N::number($general_stats['mean_gen_time'], 1)); ?></div>
61 61
 				</div>
62 62
 			</div>
63 63
 			
@@ -97,7 +97,7 @@  discard block
 block discarded – undo
97 97
 					</tr>
98 98
 				</thead>
99 99
 				<tbody>
100
-					<?php foreach($this->data->get('generation_stats') as $gen => $row) { ?>
100
+					<?php foreach ($this->data->get('generation_stats') as $gen => $row) { ?>
101 101
 					<tr class="maj-row">
102 102
 						<td class="label"><?php echo I18N::translate('<strong>G%d</strong>', $gen); ?></td>
103 103
 						<td class="label"><?php echo I18N::translate('%1$s <> %2$s', $row['gen_min_birth'], $row['gen_max_birth']); ?></td>
@@ -111,7 +111,7 @@  discard block
 block discarded – undo
111 111
 						<td class="value"><?php echo I18N::number($row['different']); ?></td>
112 112
 						<td class="value left percent_container">
113 113
 							<div class="percent_frame">
114
-								<div class="percent_cell" style="width:<?php echo 100*$row['perc_different'] ?>%;">
114
+								<div class="percent_cell" style="width:<?php echo 100 * $row['perc_different'] ?>%;">
115 115
 									&nbsp;<?php echo I18N::percentage($row['perc_different']); ?>&nbsp;
116 116
 								</div>
117 117
 							</div>
@@ -131,17 +131,17 @@  discard block
 block discarded – undo
131 131
 							             I18N::translate('%s generation'),
132 132
 							             I18N::translate('%s generations'),
133 133
 							             $this->data->get('mean_gen_depth'),
134
-							             I18N::number($this->data->get('mean_gen_depth'),2)
134
+							             I18N::number($this->data->get('mean_gen_depth'), 2)
135 135
 							         )
136 136
 							    ).
137
-								' &mdash; ' . 
137
+								' &mdash; '. 
138 138
 								I18N::translate(
139 139
 								    'Standard deviation: %s',
140 140
 								    I18N::plural(
141 141
 								        I18N::translate('%s generation'), 
142 142
 								        I18N::translate('%s generations'), 
143 143
 								        $this->data->get('stddev_gen_depth'), 
144
-								        I18N::number($this->data->get('stddev_gen_depth'),2)
144
+								        I18N::number($this->data->get('stddev_gen_depth'), 2)
145 145
 								    )
146 146
 								);
147 147
 							?>
@@ -153,17 +153,17 @@  discard block
 block discarded – undo
153 153
 			
154 154
 			<?php  
155 155
 			$top10_multi_ancestors = $this->data->get('top10multiancestors');
156
-			if(count($top10_multi_ancestors) > 0) { ?>
156
+			if (count($top10_multi_ancestors) > 0) { ?>
157 157
 			<h3><?= I18N::translate('Most duplicated root Sosa ancestors'); ?></h3>
158 158
 			<div class="maj-table">
159
-			<?php foreach($top10_multi_ancestors as $count => $indis) { ?>
159
+			<?php foreach ($top10_multi_ancestors as $count => $indis) { ?>
160 160
 			    <div class="maj-row">
161 161
 			    	<div class="label"><?= I18N::translate('%s times', I18N::number($count)); ?></div>
162 162
 			    	<div class="value"><?php 
163 163
 			    	echo implode(
164 164
 			    	    I18N::$list_separator, 
165 165
 			    	    array_map(function(Individual $indi) {
166
-			    	        return '<a href="'. $indi->getHtmlUrl(). '">'. $indi->getFullName() . '&nbsp;' . $indi->getSexImage() . '</a>';
166
+			    	        return '<a href="'.$indi->getHtmlUrl().'">'.$indi->getFullName().'&nbsp;'.$indi->getSexImage().'</a>';
167 167
 			    	    }, $indis)
168 168
 			    	);
169 169
 			    	?></div>
@@ -174,14 +174,14 @@  discard block
 block discarded – undo
174 174
 			
175 175
 			<h3><?php echo I18N::translate('Known Sosa ancestors\' family dispersion'); ?></h3>
176 176
 			<div class="center">
177
-				<?php echo $this->data->get('chart_img_g2') ?: '' ; ?>
178
-				<?php echo $this->data->get('chart_img_g3') ?: '' ; ?>
177
+				<?php echo $this->data->get('chart_img_g2') ?: ''; ?>
178
+				<?php echo $this->data->get('chart_img_g3') ?: ''; ?>
179 179
 				<!--  <canvas id="chart_ancestors_g2" width="300" height="300"></canvas>  -->
180 180
 			</div>
181 181
 			
182 182
 			<h3><?php echo I18N::translate('Mean generation depth by grandparents'); ?></h3>
183 183
 			<div class="center">
184
-				<?php echo $this->data->get('chart_img_gendepth3') ?: '' ; ?>
184
+				<?php echo $this->data->get('chart_img_gendepth3') ?: ''; ?>
185 185
 			</div>
186 186
 			
187 187
 			<?php   } else { ?>
Please login to merge, or discard this patch.
src/Webtrees/Module/Sosa/Model/SosaProvider.php 2 patches
Indentation   +710 added lines, -710 removed lines patch added patch discarded remove patch
@@ -22,413 +22,413 @@  discard block
 block discarded – undo
22 22
  */
23 23
 class SosaProvider {
24 24
     
25
-    /**
26
-     * Maximum number of generation the database is able to hold.
27
-     * @var int MAX_DB_GENERATIONS
28
-     */
29
-    const MAX_DB_GENERATIONS = 64;
30
-    
31
-    /**
32
-     * System's default user (ID -1 in the database
33
-     * @var User $default_user
34
-     */
35
-    protected static $default_user;
36
-    
37
-    /**
38
-     * Reference user
39
-     * @var User $user
40
-     */
41
-    protected $user;
42
-    
43
-    /**
44
-     * Reference tree
45
-     * @var Tree $tree
46
-     */
47
-    protected $tree;
48
-    
49
-    /**
50
-     * Cached list of Sosa Individuals by generation
51
-     * Format: key = generation, value = array ( sosa => Individual ID)
52
-     * @var array $sosa_list_by_gen
53
-     */
54
-    protected $sosa_list_by_gen;
55
-    
56
-    /**
57
-     * Cached list of Sosa Families by generation
58
-     * Format: key = generation, value = array ( sosa => Family ID)
59
-     * @var unknown $sosa_fam_list_by_gen
60
-     */
61
-    protected $sosa_fam_list_by_gen;
62
-    
63
-    /**
64
-     * Cached array of statistics by generation
65
-     * Format:  key = generation, 
66
-     *          value = array(
67
-     *              sosaCount, sosaTotalCount, diffSosaTotalCount, firstBirth, lastBirth, avgBirth
68
-     *           )
69
-     * @var array $statistics_tab
70
-     */
71
-    protected $statistics_tab;
72
-    
73
-    /**
74
-     * Has the provider's initialisation completed
75
-     * @var bool $is_setup
76
-     */
77
-    protected $is_setup;
78
-    
79
-    /**
80
-     * Constructor for Sosa Provider.
81
-     * A provider is defined in relation to a specific tree and reference user.
82
-     * 
83
-     * @param Tree $tree
84
-     * @param User $user
85
-     */
86
-    public function __construct(Tree $tree, User $user = null) {
87
-        if(self::$default_user === null) 
88
-            self::$default_user = User::find(-1);
25
+	/**
26
+	 * Maximum number of generation the database is able to hold.
27
+	 * @var int MAX_DB_GENERATIONS
28
+	 */
29
+	const MAX_DB_GENERATIONS = 64;
30
+    
31
+	/**
32
+	 * System's default user (ID -1 in the database
33
+	 * @var User $default_user
34
+	 */
35
+	protected static $default_user;
36
+    
37
+	/**
38
+	 * Reference user
39
+	 * @var User $user
40
+	 */
41
+	protected $user;
42
+    
43
+	/**
44
+	 * Reference tree
45
+	 * @var Tree $tree
46
+	 */
47
+	protected $tree;
48
+    
49
+	/**
50
+	 * Cached list of Sosa Individuals by generation
51
+	 * Format: key = generation, value = array ( sosa => Individual ID)
52
+	 * @var array $sosa_list_by_gen
53
+	 */
54
+	protected $sosa_list_by_gen;
55
+    
56
+	/**
57
+	 * Cached list of Sosa Families by generation
58
+	 * Format: key = generation, value = array ( sosa => Family ID)
59
+	 * @var unknown $sosa_fam_list_by_gen
60
+	 */
61
+	protected $sosa_fam_list_by_gen;
62
+    
63
+	/**
64
+	 * Cached array of statistics by generation
65
+	 * Format:  key = generation, 
66
+	 *          value = array(
67
+	 *              sosaCount, sosaTotalCount, diffSosaTotalCount, firstBirth, lastBirth, avgBirth
68
+	 *           )
69
+	 * @var array $statistics_tab
70
+	 */
71
+	protected $statistics_tab;
72
+    
73
+	/**
74
+	 * Has the provider's initialisation completed
75
+	 * @var bool $is_setup
76
+	 */
77
+	protected $is_setup;
78
+    
79
+	/**
80
+	 * Constructor for Sosa Provider.
81
+	 * A provider is defined in relation to a specific tree and reference user.
82
+	 * 
83
+	 * @param Tree $tree
84
+	 * @param User $user
85
+	 */
86
+	public function __construct(Tree $tree, User $user = null) {
87
+		if(self::$default_user === null) 
88
+			self::$default_user = User::find(-1);
89 89
         
90
-        $this->tree = $tree;
91
-        $this->user = $user;
92
-        $this->is_setup = true;
93
-        if($this->user === null) $this->user = Auth::user();
94
-        if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user;
90
+		$this->tree = $tree;
91
+		$this->user = $user;
92
+		$this->is_setup = true;
93
+		if($this->user === null) $this->user = Auth::user();
94
+		if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user;
95 95
         
96
-        // Check if the user, or the default user, has a root already setup;
97
-        if(empty($this->getRootIndiId())) {
98
-            if($this->user == self::$default_user) {  // If the default user is not setup
99
-                $this->is_setup = false;
100
-            }
101
-            else {
102
-                $this->user = self::$default_user;
103
-                $this->is_setup = $this->getRootIndiId() === null;
104
-            }            
105
-        }
106
-    }
107
-    
108
-    /**
109
-     * Returns is the Provider has been successfully set up
110
-     * @return bool
111
-     */
112
-    public function isSetup() {
113
-        return $this->is_setup;
114
-    }
115
-    
116
-    /**
117
-     * Return the reference tree
118
-     * 
119
-     *  @return Tree Reference tree
120
-     */
121
-    public function getTree() {
122
-        return $this->tree;
123
-    }
124
-    
125
-    /**
126
-     * Return the reference user
127
-     * 
128
-     * @return User
129
-     */
130
-    public function getUser() {
131
-        return $this->user;
132
-    }
133
-    
134
-    /**
135
-     * Return the root individual ID for the reference tree and user.
136
-     * @return string Individual ID
137
-     */
138
-    public function getRootIndiId() {
139
-        return $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID');
140
-    }
141
-    
142
-    /**
143
-     * Return the root individual for the reference tree and user.
144
-     * @return Individual Individual
145
-     */
146
-    public function getRootIndi() {
147
-        $root_indi_id = $this->getRootIndiId();
148
-        if(!empty($root_indi_id)) {
149
-            return Individual::getInstance($root_indi_id, $this->tree);
150
-        }
151
-        return null;
152
-    }
96
+		// Check if the user, or the default user, has a root already setup;
97
+		if(empty($this->getRootIndiId())) {
98
+			if($this->user == self::$default_user) {  // If the default user is not setup
99
+				$this->is_setup = false;
100
+			}
101
+			else {
102
+				$this->user = self::$default_user;
103
+				$this->is_setup = $this->getRootIndiId() === null;
104
+			}            
105
+		}
106
+	}
107
+    
108
+	/**
109
+	 * Returns is the Provider has been successfully set up
110
+	 * @return bool
111
+	 */
112
+	public function isSetup() {
113
+		return $this->is_setup;
114
+	}
115
+    
116
+	/**
117
+	 * Return the reference tree
118
+	 * 
119
+	 *  @return Tree Reference tree
120
+	 */
121
+	public function getTree() {
122
+		return $this->tree;
123
+	}
124
+    
125
+	/**
126
+	 * Return the reference user
127
+	 * 
128
+	 * @return User
129
+	 */
130
+	public function getUser() {
131
+		return $this->user;
132
+	}
133
+    
134
+	/**
135
+	 * Return the root individual ID for the reference tree and user.
136
+	 * @return string Individual ID
137
+	 */
138
+	public function getRootIndiId() {
139
+		return $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID');
140
+	}
141
+    
142
+	/**
143
+	 * Return the root individual for the reference tree and user.
144
+	 * @return Individual Individual
145
+	 */
146
+	public function getRootIndi() {
147
+		$root_indi_id = $this->getRootIndiId();
148
+		if(!empty($root_indi_id)) {
149
+			return Individual::getInstance($root_indi_id, $this->tree);
150
+		}
151
+		return null;
152
+	}
153 153
        
154
-    /*****************
154
+	/*****************
155 155
      * DATA CRUD LAYER
156 156
      *****************/
157 157
     
158
-    /**
159
-     * Remove all Sosa entries related to the gedcom file and user
160
-     */
161
-    public function deleteAll() {
162
-        if(!$this->is_setup) return;
163
-        Database::prepare(
164
-            'DELETE FROM `##maj_sosa`'.
165
-            ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ')
166
-            ->execute(array(
167
-                'tree_id' => $this->tree->getTreeId(), 
168
-                'user_id' => $this->user->getUserId()                
169
-            ));
170
-    }
171
-    
172
-    /**
173
-     * Remove all ancestors of a sosa number
174
-     * 
175
-     * @param int $sosa
176
-     */
177
-    public function deleteAncestors($sosa) {
178
-        if(!$this->is_setup) return;
179
-        $gen = Functions::getGeneration($sosa);
180
-        Database::prepare(
181
-            'DELETE FROM `##maj_sosa`'.
182
-            ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' .
183
-            ' AND majs_gen >= :gen' .
184
-            ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa'
185
-        )->execute(array(
186
-            'tree_id' => $this->tree->getTreeId(), 
187
-            'user_id' => $this->user->getUserId(),
188
-            'gen' => $gen,
189
-            'sosa' => $sosa
190
-        ));
191
-    }    
192
-    
193
-    /**
194
-     * Insert (or update if already existing) a list of Sosa individuals
195
-     * @param array $sosa_records
196
-     */
197
-    public function insertOrUpdate($sosa_records) {
198
-        if(!$this->is_setup) return;
158
+	/**
159
+	 * Remove all Sosa entries related to the gedcom file and user
160
+	 */
161
+	public function deleteAll() {
162
+		if(!$this->is_setup) return;
163
+		Database::prepare(
164
+			'DELETE FROM `##maj_sosa`'.
165
+			' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ')
166
+			->execute(array(
167
+				'tree_id' => $this->tree->getTreeId(), 
168
+				'user_id' => $this->user->getUserId()                
169
+			));
170
+	}
171
+    
172
+	/**
173
+	 * Remove all ancestors of a sosa number
174
+	 * 
175
+	 * @param int $sosa
176
+	 */
177
+	public function deleteAncestors($sosa) {
178
+		if(!$this->is_setup) return;
179
+		$gen = Functions::getGeneration($sosa);
180
+		Database::prepare(
181
+			'DELETE FROM `##maj_sosa`'.
182
+			' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' .
183
+			' AND majs_gen >= :gen' .
184
+			' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa'
185
+		)->execute(array(
186
+			'tree_id' => $this->tree->getTreeId(), 
187
+			'user_id' => $this->user->getUserId(),
188
+			'gen' => $gen,
189
+			'sosa' => $sosa
190
+		));
191
+	}    
192
+    
193
+	/**
194
+	 * Insert (or update if already existing) a list of Sosa individuals
195
+	 * @param array $sosa_records
196
+	 */
197
+	public function insertOrUpdate($sosa_records) {
198
+		if(!$this->is_setup) return;
199 199
         
200
-        $treeid = $this->tree->getTreeId();
201
-        $userid = $this->user->getUserId();
202
-        $questionmarks_table = array();
203
-        $values_table = array();
200
+		$treeid = $this->tree->getTreeId();
201
+		$userid = $this->user->getUserId();
202
+		$questionmarks_table = array();
203
+		$values_table = array();
204 204
         
205
-        $i = 0;
206
-        foreach  ($sosa_records as $row) {
207
-            $gen = Functions::getGeneration($row['sosa']);
208
-            if($gen <= self::MAX_DB_GENERATIONS) {
209
-                $questionmarks_table[] = 
210
-                    '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')';
211
-                $values_table = array_merge(
212
-                    $values_table, 
213
-                    array(
214
-                        'tree_id'.$i => $treeid, 
215
-                        'user_id'.$i => $userid, 
216
-                        'sosa'.$i => $row['sosa'], 
217
-                        'indi_id'.$i => $row['indi'], 
218
-                        'gen'.$i => Functions::getGeneration($row['sosa']),
219
-                        'byear'.$i => $row['birth_year'],
220
-                        'byearest'.$i => $row['birth_year_est'],
221
-                        'dyear'.$i => $row['death_year'],
222
-                        'dyearest'.$i => $row['death_year_est']
223
-                    )
224
-                );
225
-            }
226
-            $i++;
227
-        }
205
+		$i = 0;
206
+		foreach  ($sosa_records as $row) {
207
+			$gen = Functions::getGeneration($row['sosa']);
208
+			if($gen <= self::MAX_DB_GENERATIONS) {
209
+				$questionmarks_table[] = 
210
+					'(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')';
211
+				$values_table = array_merge(
212
+					$values_table, 
213
+					array(
214
+						'tree_id'.$i => $treeid, 
215
+						'user_id'.$i => $userid, 
216
+						'sosa'.$i => $row['sosa'], 
217
+						'indi_id'.$i => $row['indi'], 
218
+						'gen'.$i => Functions::getGeneration($row['sosa']),
219
+						'byear'.$i => $row['birth_year'],
220
+						'byearest'.$i => $row['birth_year_est'],
221
+						'dyear'.$i => $row['death_year'],
222
+						'dyearest'.$i => $row['death_year_est']
223
+					)
224
+				);
225
+			}
226
+			$i++;
227
+		}
228 228
         
229
-        $sql = 'REPLACE INTO `##maj_sosa`' .
230
-            ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' .
231
-            ' VALUES '. implode(',', $questionmarks_table);
232
-        Database::prepare($sql)->execute($values_table);
233
-    }
229
+		$sql = 'REPLACE INTO `##maj_sosa`' .
230
+			' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' .
231
+			' VALUES '. implode(',', $questionmarks_table);
232
+		Database::prepare($sql)->execute($values_table);
233
+	}
234 234
     
235
-    /****************
235
+	/****************
236 236
      * SIMPLE QUERIES
237 237
      ****************/
238 238
     
239
-    /**
240
-     * Returns the list of Sosa numbers to which an individual is related.
241
-     * Format: key = sosa number, value = generation for the Sosa number
242
-     * 
243
-     * @param Individual $indi
244
-     * @return array Array of sosa numbers
245
-     */
246
-    public function getSosaNumbers(Individual $indi) {
247
-        if(!$this->is_setup) return array();
248
-        return Database::prepare(
249
-                'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'.
250
-                ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
251
-            )->execute(array(
252
-                'indi_id' => $indi->getXref(), 
253
-                'tree_id' => $this->tree->getTreeId(), 
254
-                'user_id' => $this->user->getUserId()
255
-            ))->fetchAssoc();
256
-    }
257
-    
258
-    /**
259
-     * Get the last generation of Sosa ancestors
260
-     *
261
-     * @return number Last generation if found, 1 otherwise
262
-     */
263
-    public function getLastGeneration() {
264
-        if(!$this->is_setup) return;
265
-        return Database::prepare(
266
-                'SELECT MAX(majs_gen) FROM `##maj_sosa`'.
267
-                ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
268
-            )->execute(array(
269
-                'tree_id' => $this->tree->getTreeId(), 
270
-                'user_id' => $this->user->getUserId()                
271
-            ))->fetchOne() ?: 1;
272
-    }
273
-    
274
-    /*************
239
+	/**
240
+	 * Returns the list of Sosa numbers to which an individual is related.
241
+	 * Format: key = sosa number, value = generation for the Sosa number
242
+	 * 
243
+	 * @param Individual $indi
244
+	 * @return array Array of sosa numbers
245
+	 */
246
+	public function getSosaNumbers(Individual $indi) {
247
+		if(!$this->is_setup) return array();
248
+		return Database::prepare(
249
+				'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'.
250
+				' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
251
+			)->execute(array(
252
+				'indi_id' => $indi->getXref(), 
253
+				'tree_id' => $this->tree->getTreeId(), 
254
+				'user_id' => $this->user->getUserId()
255
+			))->fetchAssoc();
256
+	}
257
+    
258
+	/**
259
+	 * Get the last generation of Sosa ancestors
260
+	 *
261
+	 * @return number Last generation if found, 1 otherwise
262
+	 */
263
+	public function getLastGeneration() {
264
+		if(!$this->is_setup) return;
265
+		return Database::prepare(
266
+				'SELECT MAX(majs_gen) FROM `##maj_sosa`'.
267
+				' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
268
+			)->execute(array(
269
+				'tree_id' => $this->tree->getTreeId(), 
270
+				'user_id' => $this->user->getUserId()                
271
+			))->fetchOne() ?: 1;
272
+	}
273
+    
274
+	/*************
275 275
      * SOSA LISTS
276 276
      *************/
277 277
     
278
-    /**
279
-     * Return the list of all sosas, with the generations it belongs to
280
-     *
281
-     * @return array Associative array of Sosa ancestors, with their generation, comma separated
282
-     */
283
-    public function getAllSosaWithGenerations(){
284
-        if(!$this->is_setup) return array();
285
-        return Database::prepare(
286
-            'SELECT majs_i_id AS indi,' .
287
-            ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' .
288
-            ' FROM `##maj_sosa`' .
289
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' .
290
-            ' GROUP BY majs_i_id'
291
-        )->execute(array(
292
-            'tree_id' => $this->tree->getTreeId(),
293
-            'user_id' => $this->user->getUserId()
294
-        ))->fetchAssoc();
295
-    }
296
-    
297
-    /**
298
-     * Get an associative array of Sosa individuals in generation G. Keys are Sosa numbers, values individuals.
299
-     *
300
-     * @param number $gen Generation
301
-     * @return array Array of Sosa individuals
302
-     */
303
-    public function getSosaListAtGeneration($gen){
304
-        if(!$this->is_setup) return array();
305
-        if(!$this->sosa_list_by_gen)
306
-            $this->sosa_list_by_gen = array();
278
+	/**
279
+	 * Return the list of all sosas, with the generations it belongs to
280
+	 *
281
+	 * @return array Associative array of Sosa ancestors, with their generation, comma separated
282
+	 */
283
+	public function getAllSosaWithGenerations(){
284
+		if(!$this->is_setup) return array();
285
+		return Database::prepare(
286
+			'SELECT majs_i_id AS indi,' .
287
+			' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' .
288
+			' FROM `##maj_sosa`' .
289
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' .
290
+			' GROUP BY majs_i_id'
291
+		)->execute(array(
292
+			'tree_id' => $this->tree->getTreeId(),
293
+			'user_id' => $this->user->getUserId()
294
+		))->fetchAssoc();
295
+	}
296
+    
297
+	/**
298
+	 * Get an associative array of Sosa individuals in generation G. Keys are Sosa numbers, values individuals.
299
+	 *
300
+	 * @param number $gen Generation
301
+	 * @return array Array of Sosa individuals
302
+	 */
303
+	public function getSosaListAtGeneration($gen){
304
+		if(!$this->is_setup) return array();
305
+		if(!$this->sosa_list_by_gen)
306
+			$this->sosa_list_by_gen = array();
307 307
         
308
-        if($gen){
309
-            if(!isset($this->sosa_list_by_gen[$gen])){
310
-                $this->sosa_list_by_gen[$gen] = Database::prepare(
311
-                    'SELECT majs_sosa AS sosa, majs_i_id AS indi'.
312
-                    ' FROM `##maj_sosa`'.
313
-                    ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
314
-                    ' AND majs_gen = :gen'.
315
-                    ' ORDER BY majs_sosa ASC')
316
-                ->execute(array(
317
-                    'tree_id' => $this->tree->getTreeId(),
318
-                    'user_id' => $this->user->getUserId(),
319
-                    'gen' => $gen
320
-                ))
321
-                ->fetchAssoc();
322
-            }
323
-            return $this->sosa_list_by_gen[$gen];
324
-        }
325
-        return array();
326
-    }
327
-    
328
-    /**
329
-     * Get an associative array of Sosa families in generation G. Keys are Sosa numbers for the husband, values families.
330
-     *
331
-     * @param number $gen Generation
332
-     * @return array Array of Sosa families
333
-     */
334
-    public function getFamilySosaListAtGeneration($gen){
335
-        if(!$this->is_setup) return array();
336
-        if(!$this->sosa_fam_list_by_gen)
337
-            $this->sosa_fam_list_by_gen = array();
308
+		if($gen){
309
+			if(!isset($this->sosa_list_by_gen[$gen])){
310
+				$this->sosa_list_by_gen[$gen] = Database::prepare(
311
+					'SELECT majs_sosa AS sosa, majs_i_id AS indi'.
312
+					' FROM `##maj_sosa`'.
313
+					' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
314
+					' AND majs_gen = :gen'.
315
+					' ORDER BY majs_sosa ASC')
316
+				->execute(array(
317
+					'tree_id' => $this->tree->getTreeId(),
318
+					'user_id' => $this->user->getUserId(),
319
+					'gen' => $gen
320
+				))
321
+				->fetchAssoc();
322
+			}
323
+			return $this->sosa_list_by_gen[$gen];
324
+		}
325
+		return array();
326
+	}
327
+    
328
+	/**
329
+	 * Get an associative array of Sosa families in generation G. Keys are Sosa numbers for the husband, values families.
330
+	 *
331
+	 * @param number $gen Generation
332
+	 * @return array Array of Sosa families
333
+	 */
334
+	public function getFamilySosaListAtGeneration($gen){
335
+		if(!$this->is_setup) return array();
336
+		if(!$this->sosa_fam_list_by_gen)
337
+			$this->sosa_fam_list_by_gen = array();
338 338
         
339
-        if($gen){
340
-            if(!isset($this->sosa_fam_list_by_gen[$gen])){
341
-                $this->sosa_fam_list_by_gen[$gen] = Database::prepare(
342
-                    'SELECT s1.majs_sosa AS sosa, f_id AS fam'.
343
-                    ' FROM `##families`'.
344
-                    ' INNER JOIN `##maj_sosa` AS s1 ON (`##families`.f_husb = s1.majs_i_id AND `##families`.f_file = s1.majs_gedcom_id)'.
345
-                    ' INNER JOIN `##maj_sosa` AS s2 ON (`##families`.f_wife = s2.majs_i_id AND `##families`.f_file = s2.majs_gedcom_id)'.
346
-                    ' WHERE s1.majs_sosa + 1 = s2.majs_sosa'.
347
-                    ' AND s1.majs_gedcom_id= :tree_id AND s1.majs_user_id=:user_id'.
348
-                    ' AND s2.majs_gedcom_id= :tree_id AND s2.majs_user_id=:user_id'.
349
-                    ' AND s1.majs_gen = :gen'.
350
-                    ' ORDER BY s1.majs_sosa ASC'
351
-                    )
352
-                    ->execute(array(
353
-                        'tree_id' => $this->tree->getTreeId(),
354
-                        'user_id' => $this->user->getUserId(),
355
-                        'gen' => $gen
356
-                    ))
357
-                    ->fetchAssoc();
358
-            }
359
-            return $this->sosa_fam_list_by_gen[$gen];
360
-        }
361
-        return array();
362
-    }
363
-    
364
-    /**
365
-     * Get an associative array of Sosa individuals in generation G who are missing parents. Keys are Sosa numbers, values individuals.
366
-     *
367
-     * @param number $gen Generation
368
-     * @return array Array of Sosa individuals
369
-     */
370
-    public function getMissingSosaListAtGeneration($gen){
371
-        if(!$this->is_setup) return array();    
372
-        if($gen){
373
-            return $this->sosa_list_by_gen[$gen] = Database::prepare(
374
-                'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'.
375
-                ' FROM `##maj_sosa` schild'.
376
-                ' LEFT JOIN `##maj_sosa` sfat ON ((schild.majs_sosa * 2) = sfat.majs_sosa AND schild.majs_gedcom_id = sfat.majs_gedcom_id AND schild.majs_user_id = sfat.majs_user_id)'.
377
-                ' LEFT JOIN `##maj_sosa` smot ON ((schild.majs_sosa * 2 + 1) = smot.majs_sosa AND schild.majs_gedcom_id = smot.majs_gedcom_id AND schild.majs_user_id = smot.majs_user_id)'.
378
-                ' WHERE schild.majs_gedcom_id = :tree_id AND schild.majs_user_id = :user_id'.
379
-                ' AND schild.majs_gen = :gen'.
380
-                ' AND (sfat.majs_sosa IS NULL OR smot.majs_sosa IS NULL)'.
381
-                ' ORDER BY schild.majs_sosa ASC')
382
-                ->execute(array(
383
-                    'tree_id' => $this->tree->getTreeId(),
384
-                    'user_id' => $this->user->getUserId(),
385
-                    'gen' => $gen - 1
386
-                ))->fetchAll(\PDO::FETCH_ASSOC);
387
-        }
388
-        return array();
389
-    }
390
-    
391
-    
392
-    
393
-    /*************
339
+		if($gen){
340
+			if(!isset($this->sosa_fam_list_by_gen[$gen])){
341
+				$this->sosa_fam_list_by_gen[$gen] = Database::prepare(
342
+					'SELECT s1.majs_sosa AS sosa, f_id AS fam'.
343
+					' FROM `##families`'.
344
+					' INNER JOIN `##maj_sosa` AS s1 ON (`##families`.f_husb = s1.majs_i_id AND `##families`.f_file = s1.majs_gedcom_id)'.
345
+					' INNER JOIN `##maj_sosa` AS s2 ON (`##families`.f_wife = s2.majs_i_id AND `##families`.f_file = s2.majs_gedcom_id)'.
346
+					' WHERE s1.majs_sosa + 1 = s2.majs_sosa'.
347
+					' AND s1.majs_gedcom_id= :tree_id AND s1.majs_user_id=:user_id'.
348
+					' AND s2.majs_gedcom_id= :tree_id AND s2.majs_user_id=:user_id'.
349
+					' AND s1.majs_gen = :gen'.
350
+					' ORDER BY s1.majs_sosa ASC'
351
+					)
352
+					->execute(array(
353
+						'tree_id' => $this->tree->getTreeId(),
354
+						'user_id' => $this->user->getUserId(),
355
+						'gen' => $gen
356
+					))
357
+					->fetchAssoc();
358
+			}
359
+			return $this->sosa_fam_list_by_gen[$gen];
360
+		}
361
+		return array();
362
+	}
363
+    
364
+	/**
365
+	 * Get an associative array of Sosa individuals in generation G who are missing parents. Keys are Sosa numbers, values individuals.
366
+	 *
367
+	 * @param number $gen Generation
368
+	 * @return array Array of Sosa individuals
369
+	 */
370
+	public function getMissingSosaListAtGeneration($gen){
371
+		if(!$this->is_setup) return array();    
372
+		if($gen){
373
+			return $this->sosa_list_by_gen[$gen] = Database::prepare(
374
+				'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'.
375
+				' FROM `##maj_sosa` schild'.
376
+				' LEFT JOIN `##maj_sosa` sfat ON ((schild.majs_sosa * 2) = sfat.majs_sosa AND schild.majs_gedcom_id = sfat.majs_gedcom_id AND schild.majs_user_id = sfat.majs_user_id)'.
377
+				' LEFT JOIN `##maj_sosa` smot ON ((schild.majs_sosa * 2 + 1) = smot.majs_sosa AND schild.majs_gedcom_id = smot.majs_gedcom_id AND schild.majs_user_id = smot.majs_user_id)'.
378
+				' WHERE schild.majs_gedcom_id = :tree_id AND schild.majs_user_id = :user_id'.
379
+				' AND schild.majs_gen = :gen'.
380
+				' AND (sfat.majs_sosa IS NULL OR smot.majs_sosa IS NULL)'.
381
+				' ORDER BY schild.majs_sosa ASC')
382
+				->execute(array(
383
+					'tree_id' => $this->tree->getTreeId(),
384
+					'user_id' => $this->user->getUserId(),
385
+					'gen' => $gen - 1
386
+				))->fetchAll(\PDO::FETCH_ASSOC);
387
+		}
388
+		return array();
389
+	}
390
+    
391
+    
392
+    
393
+	/*************
394 394
      * STATISTICS
395 395
      *************/
396
-    /**
397
-     * Get the statistic array detailed by generation.
398
-     * Statistics for each generation are:
399
-     * 	- The number of Sosa in generation
400
-     * 	- The number of Sosa up to generation
401
-     *  - The number of distinct Sosa up to generation
402
-     *  - The year of the first birth in generation
403
-     *  - The year of the first estimated birth in generation
404
-     *  - The year of the last birth in generation
405
-     *  - The year of the last estimated birth in generation
406
-     *  - The average year of birth in generation
407
-     *
408
-     * @return array Statistics array
409
-     */
410
-    public function getStatisticsByGeneration() {
411
-        if(!$this->is_setup) return array();
412
-        if(!$this->statistics_tab) {
413
-            $this->statistics_tab = array();
414
-            if($maxGeneration = $this->getLastGeneration()) {
415
-                for ($gen = 1; $gen <= $maxGeneration; $gen++) {
416
-                    $birthStats = $this->getStatsBirthYearInGeneration($gen);
417
-                    $this->statistics_tab[$gen] = array(
418
-                        'sosaCount'				=>	$this->getSosaCountAtGeneration($gen),
419
-                        'sosaTotalCount'		=>	$this->getSosaCountUpToGeneration($gen),
420
-                        'diffSosaTotalCount'	=>	$this->getDifferentSosaCountUpToGeneration($gen),
421
-                        'firstBirth'			=>	$birthStats['first'],
422
-                        'firstEstimatedBirth'	=>	$birthStats['first_est'],
423
-                        'lastBirth'				=>	$birthStats['last'],
424
-                        'lastEstimatedBirth'	=>	$birthStats['last_est'],
425
-                        'avgBirth'				=>	$birthStats['avg']
426
-                    );
427
-                }
428
-            }
429
-        }
430
-        return $this->statistics_tab;        
431
-    }
396
+	/**
397
+	 * Get the statistic array detailed by generation.
398
+	 * Statistics for each generation are:
399
+	 * 	- The number of Sosa in generation
400
+	 * 	- The number of Sosa up to generation
401
+	 *  - The number of distinct Sosa up to generation
402
+	 *  - The year of the first birth in generation
403
+	 *  - The year of the first estimated birth in generation
404
+	 *  - The year of the last birth in generation
405
+	 *  - The year of the last estimated birth in generation
406
+	 *  - The average year of birth in generation
407
+	 *
408
+	 * @return array Statistics array
409
+	 */
410
+	public function getStatisticsByGeneration() {
411
+		if(!$this->is_setup) return array();
412
+		if(!$this->statistics_tab) {
413
+			$this->statistics_tab = array();
414
+			if($maxGeneration = $this->getLastGeneration()) {
415
+				for ($gen = 1; $gen <= $maxGeneration; $gen++) {
416
+					$birthStats = $this->getStatsBirthYearInGeneration($gen);
417
+					$this->statistics_tab[$gen] = array(
418
+						'sosaCount'				=>	$this->getSosaCountAtGeneration($gen),
419
+						'sosaTotalCount'		=>	$this->getSosaCountUpToGeneration($gen),
420
+						'diffSosaTotalCount'	=>	$this->getDifferentSosaCountUpToGeneration($gen),
421
+						'firstBirth'			=>	$birthStats['first'],
422
+						'firstEstimatedBirth'	=>	$birthStats['first_est'],
423
+						'lastBirth'				=>	$birthStats['last'],
424
+						'lastEstimatedBirth'	=>	$birthStats['last_est'],
425
+						'avgBirth'				=>	$birthStats['avg']
426
+					);
427
+				}
428
+			}
429
+		}
430
+		return $this->statistics_tab;        
431
+	}
432 432
     
433 433
 	/**
434 434
 	 * How many individuals exist in the tree.
@@ -436,332 +436,332 @@  discard block
 block discarded – undo
436 436
 	 * @return int
437 437
 	 */
438 438
 	public function getTotalIndividuals() {
439
-	    if(!$this->is_setup) return 0;
440
-	    return Database::prepare(
441
-	        'SELECT COUNT(*) FROM `##individuals`' .
442
-	        ' WHERE i_file = :tree_id')
443
-	        ->execute(array('tree_id' => $this->tree->getTreeId()))
444
-	        ->fetchOne() ?: 0;
439
+		if(!$this->is_setup) return 0;
440
+		return Database::prepare(
441
+			'SELECT COUNT(*) FROM `##individuals`' .
442
+			' WHERE i_file = :tree_id')
443
+			->execute(array('tree_id' => $this->tree->getTreeId()))
444
+			->fetchOne() ?: 0;
445 445
 	}
446 446
     
447
-    /**
448
-     * Get the total Sosa count for all generations
449
-     *
450
-     * @return number Number of Sosas
451
-     */
452
-    public function getSosaCount(){
453
-        if(!$this->is_setup) return 0;
454
-        return Database::prepare(
455
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
456
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
457
-            ->execute(array(
458
-                'tree_id' => $this->tree->getTreeId(), 
459
-                'user_id' => $this->user->getUserId() 
460
-            ))->fetchOne() ?: 0;
461
-    }
462
-    
463
-    /**
464
-     * Get the number of Sosa in a specific generation.
465
-     *
466
-     * @param number $gen Generation
467
-     * @return number Number of Sosas in generation
468
-     */
469
-    public function getSosaCountAtGeneration($gen){
470
-        if(!$this->is_setup) return 0;
471
-        return Database::prepare(
472
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
473
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
474
-            ' AND majs_gen= :gen')
475
-        ->execute(array(
476
-                'tree_id' => $this->tree->getTreeId(), 
477
-                'user_id' => $this->user->getUserId(),
478
-                'gen' => $gen            
479
-        ))->fetchOne() ?: 0;
480
-    }
481
-    
482
-    /**
483
-     * Get the total number of Sosa up to a specific generation.
484
-     *
485
-     * @param number $gen Generation
486
-     * @return number Total number of Sosas up to generation
487
-     */
488
-    public function getSosaCountUpToGeneration($gen){
489
-        if(!$this->is_setup) return 0;
490
-        return Database::prepare(
491
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
492
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
493
-            ' AND majs_gen <= :gen')
494
-        ->execute(array(
495
-                'tree_id' => $this->tree->getTreeId(), 
496
-                'user_id' => $this->user->getUserId(),
497
-                'gen' => $gen 
498
-        ))->fetchOne() ?: 0;
499
-    }
500
-    
501
-    /**
502
-     * Get the total number of distinct Sosa individual for all generations.
503
-     *
504
-     * @return number Total number of distinct individual
505
-     */
506
-    public function getDifferentSosaCount(){
507
-        if(!$this->is_setup) return 0;
508
-        return Database::prepare(
509
-            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
510
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
511
-        ->execute(array(
512
-                'tree_id' => $this->tree->getTreeId(), 
513
-                'user_id' => $this->user->getUserId()
514
-        ))->fetchOne() ?: 0;
515
-    }
516
-    
517
-    /**
518
-     * Get the number of distinct Sosa individual up to a specific generation.
519
-     *
520
-     * @param number $gen Generation
521
-     * @return number Number of distinct Sosa individuals up to generation
522
-     */
523
-    public function getDifferentSosaCountUpToGeneration($gen){
524
-        if(!$this->is_setup) return 0;
525
-        return Database::prepare(
526
-            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
527
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
528
-            ' AND majs_gen <= :gen')
529
-        ->execute(array(
530
-                'tree_id' => $this->tree->getTreeId(), 
531
-                'user_id' => $this->user->getUserId(),
532
-                'gen' => $gen 
533
-        ))->fetchOne() ?: 0;
534
-    }
535
-    
536
-    /**
537
-     * Get an array of birth statistics for a specific generation
538
-     * Statistics are :
539
-     * 	- first : First birth year in generation
540
-     *  - first_est: First estimated birth year in generation
541
-     *  - last : Last birth year in generation
542
-     *  - last_est : Last estimated birth year in generation
543
-     *  - avg : Average birth year (based on non-estimated birth date)
544
-     *
545
-     * @param number $gen Generation
546
-     * @return array Birth statistics array
547
-     */
548
-    public function getStatsBirthYearInGeneration($gen){
549
-        if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
550
-        return Database::prepare(
551
-            'SELECT'.
552
-            ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'.
553
-            ' AVG(majs_birth_year) AS avg,'.
554
-            ' MAX(majs_birth_year) AS last, MAX(majs_birth_year_est) AS last_est'.
555
-            ' FROM `##maj_sosa`'.
556
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
557
-            ' AND majs_gen=:gen')
558
-            ->execute(array(
559
-                'tree_id' => $this->tree->getTreeId(), 
560
-                'user_id' => $this->user->getUserId(),
561
-                'gen' => $gen))
562
-            ->fetchOneRow(\PDO::FETCH_ASSOC) ?: array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
563
-    }
564
-    
565
-    /**
566
-     * Get the mean generation time, based on a linear regression of birth years and generations
567
-     *
568
-     * @return number|NULL Mean generation time
569
-     */
570
-    public function getMeanGenerationTime(){
571
-        if(!$this->is_setup) return;
572
-        if(!$this->statistics_tab){
573
-            $this->getStatisticsByGeneration();
574
-        }
575
-        //Linear regression on x=generation and y=birthdate
576
-        $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0;
577
-        foreach($this->statistics_tab as $gen=>$stats){
578
-            if(!is_null($stats['avgBirth'])) {
579
-                $n++;
580
-                $sum_xy+=$gen*$stats['avgBirth'];
581
-                $sum_x+=$gen;
582
-                $sum_y+=$stats['avgBirth'];
583
-                $sum_x2+=$gen*$gen;
584
-            }
585
-        }
586
-        $denom=($n*$sum_x2)-($sum_x*$sum_x);
587
-        if($denom!=0){
588
-            return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom);
589
-        }
590
-        return null;
591
-    }
592
-    
593
-    /**
594
-     * Return an array of the mean generation depth and standard deviation for all Sosa ancestors at a given generation.
595
-     * Sosa 1 is of generation 1.
596
-     * 
597
-     * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes,
598
-     * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140
599
-     * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0
600
-     * 
601
-     * Format: 
602
-     *  - key : sosa number of the ancestor
603
-     *  - values: array
604
-     *      - root_ancestor_id : ID of the ancestor
605
-     *      - mean_gen_depth : Mean generation depth
606
-     *      - stddev_gen_depth : Standard deviation of generation depth
607
-     *  
608
-     * @param number $gen Sosa generation
609
-     * @return array
610
-     */
611
-    public function getGenerationDepthStatsAtGen($gen) {
612
-        if(!$this->is_setup) return array();
613
-        $gen_depth_stats_raw = Database::prepare(
614
-            'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'.
615
-            '   sosa_list.majs_i_id as root_ancestor_id,'.
616
-            '   1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth,'.
617
-            '   SQRT('. 
618
-            '       SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm)))'.
619
-            '       - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))), 2)'.
620
-            '   ) AS stddev_gen_depth'.
621
-            ' FROM('.
622
-            '   SELECT'.
623
-            '       sosa.majs_gedcom_id,'.
624
-            '       sosa.majs_user_id,'.
625
-            '       sosa.majs_gen - :gen AS majs_gen_norm,'.
626
-            '       FLOOR(((sosa.majs_sosa / POW(2, sosa.majs_gen -1 )) - 1) * POWER(2, :gen - 1)) + POWER(2, :gen - 1) AS root_ancestor,'.
627
-            '       SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count,'.
628
-            '       SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count'.
629
-            '   FROM `##maj_sosa` AS sosa'.
630
-            '   LEFT JOIN `##maj_sosa` AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.
631
-            '       AND sosa_fat.majs_gedcom_id = sosa.majs_gedcom_id'.
632
-            '       AND sosa_fat.majs_user_id = sosa.majs_user_id'.
633
-            '   LEFT JOIN `##maj_sosa` AS sosa_mot ON sosa_mot.majs_sosa = 2 * sosa.majs_sosa + 1'.
634
-            '       AND sosa_mot.majs_gedcom_id = sosa.majs_gedcom_id'.
635
-            '       AND sosa_mot.majs_user_id = sosa.majs_user_id'.
636
-            '   WHERE sosa.majs_gedcom_id = :tree_id'.
637
-            '       AND sosa.majs_user_id = :user_id'.
638
-            '       AND sosa.majs_gen >=  :gen'.
639
-            '       AND (sosa_fat.majs_i_id IS NULL OR sosa_mot.majs_i_id IS NULL)'.
640
-            '   GROUP BY sosa.majs_gen, root_ancestor'.
641
-            ' ) AS stats_by_gen'.
642
-            ' INNER JOIN `##maj_sosa` sosa_list ON sosa_list.majs_gedcom_id = stats_by_gen.majs_gedcom_id'.
643
-            '   AND sosa_list.majs_user_id = stats_by_gen.majs_user_id'.
644
-            '   AND sosa_list.majs_sosa = stats_by_gen.root_ancestor'.
645
-            ' GROUP BY stats_by_gen.root_ancestor, sosa_list.majs_i_id'.
646
-            ' ORDER BY stats_by_gen.root_ancestor')
647
-        ->execute(array(
648
-            'tree_id' => $this->tree->getTreeId(),
649
-            'user_id' => $this->user->getUserId(),
650
-            'gen' => $gen
651
-        ))->fetchAll() ?: array();
447
+	/**
448
+	 * Get the total Sosa count for all generations
449
+	 *
450
+	 * @return number Number of Sosas
451
+	 */
452
+	public function getSosaCount(){
453
+		if(!$this->is_setup) return 0;
454
+		return Database::prepare(
455
+			'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
456
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
457
+			->execute(array(
458
+				'tree_id' => $this->tree->getTreeId(), 
459
+				'user_id' => $this->user->getUserId() 
460
+			))->fetchOne() ?: 0;
461
+	}
462
+    
463
+	/**
464
+	 * Get the number of Sosa in a specific generation.
465
+	 *
466
+	 * @param number $gen Generation
467
+	 * @return number Number of Sosas in generation
468
+	 */
469
+	public function getSosaCountAtGeneration($gen){
470
+		if(!$this->is_setup) return 0;
471
+		return Database::prepare(
472
+			'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
473
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
474
+			' AND majs_gen= :gen')
475
+		->execute(array(
476
+				'tree_id' => $this->tree->getTreeId(), 
477
+				'user_id' => $this->user->getUserId(),
478
+				'gen' => $gen            
479
+		))->fetchOne() ?: 0;
480
+	}
481
+    
482
+	/**
483
+	 * Get the total number of Sosa up to a specific generation.
484
+	 *
485
+	 * @param number $gen Generation
486
+	 * @return number Total number of Sosas up to generation
487
+	 */
488
+	public function getSosaCountUpToGeneration($gen){
489
+		if(!$this->is_setup) return 0;
490
+		return Database::prepare(
491
+			'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
492
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
493
+			' AND majs_gen <= :gen')
494
+		->execute(array(
495
+				'tree_id' => $this->tree->getTreeId(), 
496
+				'user_id' => $this->user->getUserId(),
497
+				'gen' => $gen 
498
+		))->fetchOne() ?: 0;
499
+	}
500
+    
501
+	/**
502
+	 * Get the total number of distinct Sosa individual for all generations.
503
+	 *
504
+	 * @return number Total number of distinct individual
505
+	 */
506
+	public function getDifferentSosaCount(){
507
+		if(!$this->is_setup) return 0;
508
+		return Database::prepare(
509
+			'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
510
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
511
+		->execute(array(
512
+				'tree_id' => $this->tree->getTreeId(), 
513
+				'user_id' => $this->user->getUserId()
514
+		))->fetchOne() ?: 0;
515
+	}
516
+    
517
+	/**
518
+	 * Get the number of distinct Sosa individual up to a specific generation.
519
+	 *
520
+	 * @param number $gen Generation
521
+	 * @return number Number of distinct Sosa individuals up to generation
522
+	 */
523
+	public function getDifferentSosaCountUpToGeneration($gen){
524
+		if(!$this->is_setup) return 0;
525
+		return Database::prepare(
526
+			'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
527
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
528
+			' AND majs_gen <= :gen')
529
+		->execute(array(
530
+				'tree_id' => $this->tree->getTreeId(), 
531
+				'user_id' => $this->user->getUserId(),
532
+				'gen' => $gen 
533
+		))->fetchOne() ?: 0;
534
+	}
535
+    
536
+	/**
537
+	 * Get an array of birth statistics for a specific generation
538
+	 * Statistics are :
539
+	 * 	- first : First birth year in generation
540
+	 *  - first_est: First estimated birth year in generation
541
+	 *  - last : Last birth year in generation
542
+	 *  - last_est : Last estimated birth year in generation
543
+	 *  - avg : Average birth year (based on non-estimated birth date)
544
+	 *
545
+	 * @param number $gen Generation
546
+	 * @return array Birth statistics array
547
+	 */
548
+	public function getStatsBirthYearInGeneration($gen){
549
+		if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
550
+		return Database::prepare(
551
+			'SELECT'.
552
+			' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'.
553
+			' AVG(majs_birth_year) AS avg,'.
554
+			' MAX(majs_birth_year) AS last, MAX(majs_birth_year_est) AS last_est'.
555
+			' FROM `##maj_sosa`'.
556
+			' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
557
+			' AND majs_gen=:gen')
558
+			->execute(array(
559
+				'tree_id' => $this->tree->getTreeId(), 
560
+				'user_id' => $this->user->getUserId(),
561
+				'gen' => $gen))
562
+			->fetchOneRow(\PDO::FETCH_ASSOC) ?: array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
563
+	}
564
+    
565
+	/**
566
+	 * Get the mean generation time, based on a linear regression of birth years and generations
567
+	 *
568
+	 * @return number|NULL Mean generation time
569
+	 */
570
+	public function getMeanGenerationTime(){
571
+		if(!$this->is_setup) return;
572
+		if(!$this->statistics_tab){
573
+			$this->getStatisticsByGeneration();
574
+		}
575
+		//Linear regression on x=generation and y=birthdate
576
+		$sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0;
577
+		foreach($this->statistics_tab as $gen=>$stats){
578
+			if(!is_null($stats['avgBirth'])) {
579
+				$n++;
580
+				$sum_xy+=$gen*$stats['avgBirth'];
581
+				$sum_x+=$gen;
582
+				$sum_y+=$stats['avgBirth'];
583
+				$sum_x2+=$gen*$gen;
584
+			}
585
+		}
586
+		$denom=($n*$sum_x2)-($sum_x*$sum_x);
587
+		if($denom!=0){
588
+			return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom);
589
+		}
590
+		return null;
591
+	}
592
+    
593
+	/**
594
+	 * Return an array of the mean generation depth and standard deviation for all Sosa ancestors at a given generation.
595
+	 * Sosa 1 is of generation 1.
596
+	 * 
597
+	 * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes,
598
+	 * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140
599
+	 * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0
600
+	 * 
601
+	 * Format: 
602
+	 *  - key : sosa number of the ancestor
603
+	 *  - values: array
604
+	 *      - root_ancestor_id : ID of the ancestor
605
+	 *      - mean_gen_depth : Mean generation depth
606
+	 *      - stddev_gen_depth : Standard deviation of generation depth
607
+	 *  
608
+	 * @param number $gen Sosa generation
609
+	 * @return array
610
+	 */
611
+	public function getGenerationDepthStatsAtGen($gen) {
612
+		if(!$this->is_setup) return array();
613
+		$gen_depth_stats_raw = Database::prepare(
614
+			'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'.
615
+			'   sosa_list.majs_i_id as root_ancestor_id,'.
616
+			'   1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth,'.
617
+			'   SQRT('. 
618
+			'       SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm)))'.
619
+			'       - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))), 2)'.
620
+			'   ) AS stddev_gen_depth'.
621
+			' FROM('.
622
+			'   SELECT'.
623
+			'       sosa.majs_gedcom_id,'.
624
+			'       sosa.majs_user_id,'.
625
+			'       sosa.majs_gen - :gen AS majs_gen_norm,'.
626
+			'       FLOOR(((sosa.majs_sosa / POW(2, sosa.majs_gen -1 )) - 1) * POWER(2, :gen - 1)) + POWER(2, :gen - 1) AS root_ancestor,'.
627
+			'       SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count,'.
628
+			'       SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count'.
629
+			'   FROM `##maj_sosa` AS sosa'.
630
+			'   LEFT JOIN `##maj_sosa` AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.
631
+			'       AND sosa_fat.majs_gedcom_id = sosa.majs_gedcom_id'.
632
+			'       AND sosa_fat.majs_user_id = sosa.majs_user_id'.
633
+			'   LEFT JOIN `##maj_sosa` AS sosa_mot ON sosa_mot.majs_sosa = 2 * sosa.majs_sosa + 1'.
634
+			'       AND sosa_mot.majs_gedcom_id = sosa.majs_gedcom_id'.
635
+			'       AND sosa_mot.majs_user_id = sosa.majs_user_id'.
636
+			'   WHERE sosa.majs_gedcom_id = :tree_id'.
637
+			'       AND sosa.majs_user_id = :user_id'.
638
+			'       AND sosa.majs_gen >=  :gen'.
639
+			'       AND (sosa_fat.majs_i_id IS NULL OR sosa_mot.majs_i_id IS NULL)'.
640
+			'   GROUP BY sosa.majs_gen, root_ancestor'.
641
+			' ) AS stats_by_gen'.
642
+			' INNER JOIN `##maj_sosa` sosa_list ON sosa_list.majs_gedcom_id = stats_by_gen.majs_gedcom_id'.
643
+			'   AND sosa_list.majs_user_id = stats_by_gen.majs_user_id'.
644
+			'   AND sosa_list.majs_sosa = stats_by_gen.root_ancestor'.
645
+			' GROUP BY stats_by_gen.root_ancestor, sosa_list.majs_i_id'.
646
+			' ORDER BY stats_by_gen.root_ancestor')
647
+		->execute(array(
648
+			'tree_id' => $this->tree->getTreeId(),
649
+			'user_id' => $this->user->getUserId(),
650
+			'gen' => $gen
651
+		))->fetchAll() ?: array();
652 652
         
653
-        $gen_depth_stats = array();
654
-        foreach ($gen_depth_stats_raw as $gen_depth_stat) {
655
-            $gen_depth_stats[$gen_depth_stat->root_ancestor_sosa] = array(
656
-                'root_ancestor_id' => $gen_depth_stat->root_ancestor_id,
657
-                'mean_gen_depth' => $gen_depth_stat->mean_gen_depth,
658
-                'stddev_gen_depth' => $gen_depth_stat->stddev_gen_depth
659
-            );
660
-        }
661
-        return $gen_depth_stats;
662
-    }
663
-    
664
-    /**
665
-     * Return a computed array of statistics about the dispersion of ancestors across the ancestors
666
-     * at a specified generation.
667
-     * This statistics cannot be used for generations above 11, as it would cause a out of range in MySQL
668
-     * 
669
-     * Format: 
670
-     *  - key : a base-2 representation of the ancestor at generation G for which exclusive ancestors have been found,
671
-     *          -1 is used for shared ancestors
672
-     *          For instance base2(0100) = base10(4) represent the maternal grand father
673
-     *  - values: number of ancestors exclusively in the ancestors of the ancestor in key
674
-     *  
675
-     *  For instance a result at generation 3 could be :
676
-     *      array (   -1        =>  12      -> 12 ancestors are shared by the grand-parents
677
-     *                base10(1) =>  32      -> 32 ancestors are exclusive to the paternal grand-father
678
-     *                base10(2) =>  25      -> 25 ancestors are exclusive to the paternal grand-mother
679
-     *                base10(4) =>  12      -> 12 ancestors are exclusive to the maternal grand-father
680
-     *                base10(8) =>  30      -> 30 ancestors are exclusive to the maternal grand-mother
681
-     *            )
682
-     *  
683
-     * @param int $gen Reference generation
684
-     * @return array
685
-     */
686
-    public function getAncestorDispersionForGen($gen) {
687
-        if(!$this->is_setup || $gen > 11) return array();  // Going further than 11 gen will be out of range in the query
688
-        return Database::prepare(
689
-            'SELECT branches, count(i_id)'.
690
-            ' FROM ('.
691
-            '   SELECT i_id,'.
692
-            '       CASE'.
693
-            '           WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'.
694
-            '           ELSE -1'.   // We put all ancestors shared between some branches in the same bucket
695
-            '       END branches'.
696
-            '   FROM ('.
697
-            '       SELECT DISTINCT majs_i_id i_id,'.
698
-            '           POW(2, FLOOR(majs_sosa / POW(2, (majs_gen - :gen))) - POW(2, :gen -1)) branch'.
699
-            '       FROM `##maj_sosa`'.
700
-            '       WHERE majs_gedcom_id = :tree_id AND majs_user_id = :user_id'.
701
-            '           AND majs_gen >= :gen'.
702
-            '   ) indistat'.
703
-            '   GROUP BY i_id'.
704
-            ') grouped'.
705
-            ' GROUP BY branches')
706
-            ->execute(array(
707
-                'tree_id' => $this->tree->getTreeId(), 
708
-                'user_id' => $this->user->getUserId(),
709
-                'gen' => $gen
710
-            ))->fetchAssoc() ?: array();
711
-    }
712
-    
713
-    /**
714
-     * Return an array of the most duplicated root Sosa ancestors.
715
-     * The number of ancestors to return is limited by the parameter $limit.
716
-     * If several individuals are tied when reaching the limit, none of them are returned,
717
-     * which means that there can be less individuals returned than requested.
718
-     * 
719
-     * Format: 
720
-     *  - key : root Sosa individual
721
-     *  - value: number of duplications of the ancestor (e.g. 3 if it appears 3 times)
722
-     * 
723
-     * @param number $limit Maximum number of individuals to return
724
-     * @return array 
725
-     */
726
-    public function getTopMultiSosaAncestorsNoTies($limit) {
727
-        if(!$this->is_setup) return array();
728
-        return Database::prepare(
729
-            'SELECT sosa_i_id, sosa_count FROM ('.
730
-            '   SELECT'.
731
-            '       top_sosa.sosa_i_id, top_sosa.sosa_count, top_sosa.sosa_min,'.
732
-            '       @keep := IF(@prev_count = 0 OR sosa_count = @prev_count, @keep, 1) AS keep,'.
733
-            '       @prev_count := top_sosa.sosa_count AS prev_count'.
734
-            '   FROM ('.
735
-            '       SELECT'.
736
-            '           sosa.majs_i_id sosa_i_id,'.
737
-            '           COUNT(sosa.majs_sosa) sosa_count,'.
738
-            '           MIN(sosa.majs_sosa) sosa_min'.
739
-            '       FROM ##maj_sosa AS sosa'.
740
-            '       LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.   // Link to sosa's father
741
-            '           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
742
-            '           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
743
-            '       LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.  // Link to sosa's mother
744
-            '           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
745
-            '           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
746
-            '       WHERE sosa.majs_gedcom_id = :tree_id'.
747
-            '       AND sosa.majs_user_id = :user_id'.
748
-            '       AND sosa_fat.majs_sosa IS NULL'.    // We keep only root individuals, i.e. those with no father or mother
749
-            '       AND sosa_mot.majs_sosa IS NULL'. 
750
-            '       GROUP BY sosa.majs_i_id'.
751
-            '       HAVING COUNT(sosa.majs_sosa) > 1'.   // Limit to the duplicate sosas.
752
-            '       ORDER BY COUNT(sosa.majs_sosa) DESC'.
753
-            '       LIMIT ' . ($limit + 1) . // We want to select one more than required
754
-            '   ) AS top_sosa,'.
755
-            '   (SELECT @prev_count := 0, @keep := 0) x'.
756
-            '   ORDER BY top_sosa.sosa_count ASC'.
757
-            ' ) top_sosa_list'.
758
-            ' WHERE keep = 1'.
759
-            ' ORDER BY sosa_count DESC, sosa_min ASC'
760
-            )->execute(array(
761
-                'tree_id' => $this->tree->getTreeId(),
762
-                'user_id' => $this->user->getUserId()
763
-            ))->fetchAssoc() ?: array();
764
-    }
653
+		$gen_depth_stats = array();
654
+		foreach ($gen_depth_stats_raw as $gen_depth_stat) {
655
+			$gen_depth_stats[$gen_depth_stat->root_ancestor_sosa] = array(
656
+				'root_ancestor_id' => $gen_depth_stat->root_ancestor_id,
657
+				'mean_gen_depth' => $gen_depth_stat->mean_gen_depth,
658
+				'stddev_gen_depth' => $gen_depth_stat->stddev_gen_depth
659
+			);
660
+		}
661
+		return $gen_depth_stats;
662
+	}
663
+    
664
+	/**
665
+	 * Return a computed array of statistics about the dispersion of ancestors across the ancestors
666
+	 * at a specified generation.
667
+	 * This statistics cannot be used for generations above 11, as it would cause a out of range in MySQL
668
+	 * 
669
+	 * Format: 
670
+	 *  - key : a base-2 representation of the ancestor at generation G for which exclusive ancestors have been found,
671
+	 *          -1 is used for shared ancestors
672
+	 *          For instance base2(0100) = base10(4) represent the maternal grand father
673
+	 *  - values: number of ancestors exclusively in the ancestors of the ancestor in key
674
+	 *  
675
+	 *  For instance a result at generation 3 could be :
676
+	 *      array (   -1        =>  12      -> 12 ancestors are shared by the grand-parents
677
+	 *                base10(1) =>  32      -> 32 ancestors are exclusive to the paternal grand-father
678
+	 *                base10(2) =>  25      -> 25 ancestors are exclusive to the paternal grand-mother
679
+	 *                base10(4) =>  12      -> 12 ancestors are exclusive to the maternal grand-father
680
+	 *                base10(8) =>  30      -> 30 ancestors are exclusive to the maternal grand-mother
681
+	 *            )
682
+	 *  
683
+	 * @param int $gen Reference generation
684
+	 * @return array
685
+	 */
686
+	public function getAncestorDispersionForGen($gen) {
687
+		if(!$this->is_setup || $gen > 11) return array();  // Going further than 11 gen will be out of range in the query
688
+		return Database::prepare(
689
+			'SELECT branches, count(i_id)'.
690
+			' FROM ('.
691
+			'   SELECT i_id,'.
692
+			'       CASE'.
693
+			'           WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'.
694
+			'           ELSE -1'.   // We put all ancestors shared between some branches in the same bucket
695
+			'       END branches'.
696
+			'   FROM ('.
697
+			'       SELECT DISTINCT majs_i_id i_id,'.
698
+			'           POW(2, FLOOR(majs_sosa / POW(2, (majs_gen - :gen))) - POW(2, :gen -1)) branch'.
699
+			'       FROM `##maj_sosa`'.
700
+			'       WHERE majs_gedcom_id = :tree_id AND majs_user_id = :user_id'.
701
+			'           AND majs_gen >= :gen'.
702
+			'   ) indistat'.
703
+			'   GROUP BY i_id'.
704
+			') grouped'.
705
+			' GROUP BY branches')
706
+			->execute(array(
707
+				'tree_id' => $this->tree->getTreeId(), 
708
+				'user_id' => $this->user->getUserId(),
709
+				'gen' => $gen
710
+			))->fetchAssoc() ?: array();
711
+	}
712
+    
713
+	/**
714
+	 * Return an array of the most duplicated root Sosa ancestors.
715
+	 * The number of ancestors to return is limited by the parameter $limit.
716
+	 * If several individuals are tied when reaching the limit, none of them are returned,
717
+	 * which means that there can be less individuals returned than requested.
718
+	 * 
719
+	 * Format: 
720
+	 *  - key : root Sosa individual
721
+	 *  - value: number of duplications of the ancestor (e.g. 3 if it appears 3 times)
722
+	 * 
723
+	 * @param number $limit Maximum number of individuals to return
724
+	 * @return array 
725
+	 */
726
+	public function getTopMultiSosaAncestorsNoTies($limit) {
727
+		if(!$this->is_setup) return array();
728
+		return Database::prepare(
729
+			'SELECT sosa_i_id, sosa_count FROM ('.
730
+			'   SELECT'.
731
+			'       top_sosa.sosa_i_id, top_sosa.sosa_count, top_sosa.sosa_min,'.
732
+			'       @keep := IF(@prev_count = 0 OR sosa_count = @prev_count, @keep, 1) AS keep,'.
733
+			'       @prev_count := top_sosa.sosa_count AS prev_count'.
734
+			'   FROM ('.
735
+			'       SELECT'.
736
+			'           sosa.majs_i_id sosa_i_id,'.
737
+			'           COUNT(sosa.majs_sosa) sosa_count,'.
738
+			'           MIN(sosa.majs_sosa) sosa_min'.
739
+			'       FROM ##maj_sosa AS sosa'.
740
+			'       LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.   // Link to sosa's father
741
+			'           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
742
+			'           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
743
+			'       LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.  // Link to sosa's mother
744
+			'           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
745
+			'           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
746
+			'       WHERE sosa.majs_gedcom_id = :tree_id'.
747
+			'       AND sosa.majs_user_id = :user_id'.
748
+			'       AND sosa_fat.majs_sosa IS NULL'.    // We keep only root individuals, i.e. those with no father or mother
749
+			'       AND sosa_mot.majs_sosa IS NULL'. 
750
+			'       GROUP BY sosa.majs_i_id'.
751
+			'       HAVING COUNT(sosa.majs_sosa) > 1'.   // Limit to the duplicate sosas.
752
+			'       ORDER BY COUNT(sosa.majs_sosa) DESC'.
753
+			'       LIMIT ' . ($limit + 1) . // We want to select one more than required
754
+			'   ) AS top_sosa,'.
755
+			'   (SELECT @prev_count := 0, @keep := 0) x'.
756
+			'   ORDER BY top_sosa.sosa_count ASC'.
757
+			' ) top_sosa_list'.
758
+			' WHERE keep = 1'.
759
+			' ORDER BY sosa_count DESC, sosa_min ASC'
760
+			)->execute(array(
761
+				'tree_id' => $this->tree->getTreeId(),
762
+				'user_id' => $this->user->getUserId()
763
+			))->fetchAssoc() ?: array();
764
+	}
765 765
     
766 766
                
767 767
 }
Please login to merge, or discard this patch.
Spacing   +81 added lines, -81 removed lines patch added patch discarded remove patch
@@ -84,18 +84,18 @@  discard block
 block discarded – undo
84 84
      * @param User $user
85 85
      */
86 86
     public function __construct(Tree $tree, User $user = null) {
87
-        if(self::$default_user === null) 
87
+        if (self::$default_user === null) 
88 88
             self::$default_user = User::find(-1);
89 89
         
90 90
         $this->tree = $tree;
91 91
         $this->user = $user;
92 92
         $this->is_setup = true;
93
-        if($this->user === null) $this->user = Auth::user();
94
-        if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user;
93
+        if ($this->user === null) $this->user = Auth::user();
94
+        if (strlen($this->user->getUserId()) == 0) $this->user = self::$default_user;
95 95
         
96 96
         // Check if the user, or the default user, has a root already setup;
97
-        if(empty($this->getRootIndiId())) {
98
-            if($this->user == self::$default_user) {  // If the default user is not setup
97
+        if (empty($this->getRootIndiId())) {
98
+            if ($this->user == self::$default_user) {  // If the default user is not setup
99 99
                 $this->is_setup = false;
100 100
             }
101 101
             else {
@@ -145,7 +145,7 @@  discard block
 block discarded – undo
145 145
      */
146 146
     public function getRootIndi() {
147 147
         $root_indi_id = $this->getRootIndiId();
148
-        if(!empty($root_indi_id)) {
148
+        if (!empty($root_indi_id)) {
149 149
             return Individual::getInstance($root_indi_id, $this->tree);
150 150
         }
151 151
         return null;
@@ -159,7 +159,7 @@  discard block
 block discarded – undo
159 159
      * Remove all Sosa entries related to the gedcom file and user
160 160
      */
161 161
     public function deleteAll() {
162
-        if(!$this->is_setup) return;
162
+        if (!$this->is_setup) return;
163 163
         Database::prepare(
164 164
             'DELETE FROM `##maj_sosa`'.
165 165
             ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ')
@@ -175,12 +175,12 @@  discard block
 block discarded – undo
175 175
      * @param int $sosa
176 176
      */
177 177
     public function deleteAncestors($sosa) {
178
-        if(!$this->is_setup) return;
178
+        if (!$this->is_setup) return;
179 179
         $gen = Functions::getGeneration($sosa);
180 180
         Database::prepare(
181 181
             'DELETE FROM `##maj_sosa`'.
182
-            ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' .
183
-            ' AND majs_gen >= :gen' .
182
+            ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id'.
183
+            ' AND majs_gen >= :gen'.
184 184
             ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa'
185 185
         )->execute(array(
186 186
             'tree_id' => $this->tree->getTreeId(), 
@@ -195,7 +195,7 @@  discard block
 block discarded – undo
195 195
      * @param array $sosa_records
196 196
      */
197 197
     public function insertOrUpdate($sosa_records) {
198
-        if(!$this->is_setup) return;
198
+        if (!$this->is_setup) return;
199 199
         
200 200
         $treeid = $this->tree->getTreeId();
201 201
         $userid = $this->user->getUserId();
@@ -203,9 +203,9 @@  discard block
 block discarded – undo
203 203
         $values_table = array();
204 204
         
205 205
         $i = 0;
206
-        foreach  ($sosa_records as $row) {
206
+        foreach ($sosa_records as $row) {
207 207
             $gen = Functions::getGeneration($row['sosa']);
208
-            if($gen <= self::MAX_DB_GENERATIONS) {
208
+            if ($gen <= self::MAX_DB_GENERATIONS) {
209 209
                 $questionmarks_table[] = 
210 210
                     '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')';
211 211
                 $values_table = array_merge(
@@ -226,9 +226,9 @@  discard block
 block discarded – undo
226 226
             $i++;
227 227
         }
228 228
         
229
-        $sql = 'REPLACE INTO `##maj_sosa`' .
230
-            ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' .
231
-            ' VALUES '. implode(',', $questionmarks_table);
229
+        $sql = 'REPLACE INTO `##maj_sosa`'.
230
+            ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)'.
231
+            ' VALUES '.implode(',', $questionmarks_table);
232 232
         Database::prepare($sql)->execute($values_table);
233 233
     }
234 234
     
@@ -244,7 +244,7 @@  discard block
 block discarded – undo
244 244
      * @return array Array of sosa numbers
245 245
      */
246 246
     public function getSosaNumbers(Individual $indi) {
247
-        if(!$this->is_setup) return array();
247
+        if (!$this->is_setup) return array();
248 248
         return Database::prepare(
249 249
                 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'.
250 250
                 ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
@@ -261,7 +261,7 @@  discard block
 block discarded – undo
261 261
      * @return number Last generation if found, 1 otherwise
262 262
      */
263 263
     public function getLastGeneration() {
264
-        if(!$this->is_setup) return;
264
+        if (!$this->is_setup) return;
265 265
         return Database::prepare(
266 266
                 'SELECT MAX(majs_gen) FROM `##maj_sosa`'.
267 267
                 ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'
@@ -280,13 +280,13 @@  discard block
 block discarded – undo
280 280
      *
281 281
      * @return array Associative array of Sosa ancestors, with their generation, comma separated
282 282
      */
283
-    public function getAllSosaWithGenerations(){
284
-        if(!$this->is_setup) return array();
283
+    public function getAllSosaWithGenerations() {
284
+        if (!$this->is_setup) return array();
285 285
         return Database::prepare(
286
-            'SELECT majs_i_id AS indi,' .
287
-            ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' .
288
-            ' FROM `##maj_sosa`' .
289
-            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' .
286
+            'SELECT majs_i_id AS indi,'.
287
+            ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations'.
288
+            ' FROM `##maj_sosa`'.
289
+            ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
290 290
             ' GROUP BY majs_i_id'
291 291
         )->execute(array(
292 292
             'tree_id' => $this->tree->getTreeId(),
@@ -300,13 +300,13 @@  discard block
 block discarded – undo
300 300
      * @param number $gen Generation
301 301
      * @return array Array of Sosa individuals
302 302
      */
303
-    public function getSosaListAtGeneration($gen){
304
-        if(!$this->is_setup) return array();
305
-        if(!$this->sosa_list_by_gen)
303
+    public function getSosaListAtGeneration($gen) {
304
+        if (!$this->is_setup) return array();
305
+        if (!$this->sosa_list_by_gen)
306 306
             $this->sosa_list_by_gen = array();
307 307
         
308
-        if($gen){
309
-            if(!isset($this->sosa_list_by_gen[$gen])){
308
+        if ($gen) {
309
+            if (!isset($this->sosa_list_by_gen[$gen])) {
310 310
                 $this->sosa_list_by_gen[$gen] = Database::prepare(
311 311
                     'SELECT majs_sosa AS sosa, majs_i_id AS indi'.
312 312
                     ' FROM `##maj_sosa`'.
@@ -331,13 +331,13 @@  discard block
 block discarded – undo
331 331
      * @param number $gen Generation
332 332
      * @return array Array of Sosa families
333 333
      */
334
-    public function getFamilySosaListAtGeneration($gen){
335
-        if(!$this->is_setup) return array();
336
-        if(!$this->sosa_fam_list_by_gen)
334
+    public function getFamilySosaListAtGeneration($gen) {
335
+        if (!$this->is_setup) return array();
336
+        if (!$this->sosa_fam_list_by_gen)
337 337
             $this->sosa_fam_list_by_gen = array();
338 338
         
339
-        if($gen){
340
-            if(!isset($this->sosa_fam_list_by_gen[$gen])){
339
+        if ($gen) {
340
+            if (!isset($this->sosa_fam_list_by_gen[$gen])) {
341 341
                 $this->sosa_fam_list_by_gen[$gen] = Database::prepare(
342 342
                     'SELECT s1.majs_sosa AS sosa, f_id AS fam'.
343 343
                     ' FROM `##families`'.
@@ -367,9 +367,9 @@  discard block
 block discarded – undo
367 367
      * @param number $gen Generation
368 368
      * @return array Array of Sosa individuals
369 369
      */
370
-    public function getMissingSosaListAtGeneration($gen){
371
-        if(!$this->is_setup) return array();    
372
-        if($gen){
370
+    public function getMissingSosaListAtGeneration($gen) {
371
+        if (!$this->is_setup) return array();    
372
+        if ($gen) {
373 373
             return $this->sosa_list_by_gen[$gen] = Database::prepare(
374 374
                 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'.
375 375
                 ' FROM `##maj_sosa` schild'.
@@ -408,10 +408,10 @@  discard block
 block discarded – undo
408 408
      * @return array Statistics array
409 409
      */
410 410
     public function getStatisticsByGeneration() {
411
-        if(!$this->is_setup) return array();
412
-        if(!$this->statistics_tab) {
411
+        if (!$this->is_setup) return array();
412
+        if (!$this->statistics_tab) {
413 413
             $this->statistics_tab = array();
414
-            if($maxGeneration = $this->getLastGeneration()) {
414
+            if ($maxGeneration = $this->getLastGeneration()) {
415 415
                 for ($gen = 1; $gen <= $maxGeneration; $gen++) {
416 416
                     $birthStats = $this->getStatsBirthYearInGeneration($gen);
417 417
                     $this->statistics_tab[$gen] = array(
@@ -436,9 +436,9 @@  discard block
 block discarded – undo
436 436
 	 * @return int
437 437
 	 */
438 438
 	public function getTotalIndividuals() {
439
-	    if(!$this->is_setup) return 0;
439
+	    if (!$this->is_setup) return 0;
440 440
 	    return Database::prepare(
441
-	        'SELECT COUNT(*) FROM `##individuals`' .
441
+	        'SELECT COUNT(*) FROM `##individuals`'.
442 442
 	        ' WHERE i_file = :tree_id')
443 443
 	        ->execute(array('tree_id' => $this->tree->getTreeId()))
444 444
 	        ->fetchOne() ?: 0;
@@ -449,10 +449,10 @@  discard block
 block discarded – undo
449 449
      *
450 450
      * @return number Number of Sosas
451 451
      */
452
-    public function getSosaCount(){
453
-        if(!$this->is_setup) return 0;
452
+    public function getSosaCount() {
453
+        if (!$this->is_setup) return 0;
454 454
         return Database::prepare(
455
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
455
+            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'.
456 456
             ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
457 457
             ->execute(array(
458 458
                 'tree_id' => $this->tree->getTreeId(), 
@@ -466,10 +466,10 @@  discard block
 block discarded – undo
466 466
      * @param number $gen Generation
467 467
      * @return number Number of Sosas in generation
468 468
      */
469
-    public function getSosaCountAtGeneration($gen){
470
-        if(!$this->is_setup) return 0;
469
+    public function getSosaCountAtGeneration($gen) {
470
+        if (!$this->is_setup) return 0;
471 471
         return Database::prepare(
472
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
472
+            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'.
473 473
             ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
474 474
             ' AND majs_gen= :gen')
475 475
         ->execute(array(
@@ -485,10 +485,10 @@  discard block
 block discarded – undo
485 485
      * @param number $gen Generation
486 486
      * @return number Total number of Sosas up to generation
487 487
      */
488
-    public function getSosaCountUpToGeneration($gen){
489
-        if(!$this->is_setup) return 0;
488
+    public function getSosaCountUpToGeneration($gen) {
489
+        if (!$this->is_setup) return 0;
490 490
         return Database::prepare(
491
-            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' .
491
+            'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'.
492 492
             ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
493 493
             ' AND majs_gen <= :gen')
494 494
         ->execute(array(
@@ -503,10 +503,10 @@  discard block
 block discarded – undo
503 503
      *
504 504
      * @return number Total number of distinct individual
505 505
      */
506
-    public function getDifferentSosaCount(){
507
-        if(!$this->is_setup) return 0;
506
+    public function getDifferentSosaCount() {
507
+        if (!$this->is_setup) return 0;
508 508
         return Database::prepare(
509
-            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
509
+            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'.
510 510
             ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id')
511 511
         ->execute(array(
512 512
                 'tree_id' => $this->tree->getTreeId(), 
@@ -520,10 +520,10 @@  discard block
 block discarded – undo
520 520
      * @param number $gen Generation
521 521
      * @return number Number of distinct Sosa individuals up to generation
522 522
      */
523
-    public function getDifferentSosaCountUpToGeneration($gen){
524
-        if(!$this->is_setup) return 0;
523
+    public function getDifferentSosaCountUpToGeneration($gen) {
524
+        if (!$this->is_setup) return 0;
525 525
         return Database::prepare(
526
-            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' .
526
+            'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'.
527 527
             ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'.
528 528
             ' AND majs_gen <= :gen')
529 529
         ->execute(array(
@@ -545,8 +545,8 @@  discard block
 block discarded – undo
545 545
      * @param number $gen Generation
546 546
      * @return array Birth statistics array
547 547
      */
548
-    public function getStatsBirthYearInGeneration($gen){
549
-        if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
548
+    public function getStatsBirthYearInGeneration($gen) {
549
+        if (!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0);
550 550
         return Database::prepare(
551 551
             'SELECT'.
552 552
             ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'.
@@ -567,25 +567,25 @@  discard block
 block discarded – undo
567 567
      *
568 568
      * @return number|NULL Mean generation time
569 569
      */
570
-    public function getMeanGenerationTime(){
571
-        if(!$this->is_setup) return;
572
-        if(!$this->statistics_tab){
570
+    public function getMeanGenerationTime() {
571
+        if (!$this->is_setup) return;
572
+        if (!$this->statistics_tab) {
573 573
             $this->getStatisticsByGeneration();
574 574
         }
575 575
         //Linear regression on x=generation and y=birthdate
576
-        $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0;
577
-        foreach($this->statistics_tab as $gen=>$stats){
578
-            if(!is_null($stats['avgBirth'])) {
576
+        $sum_xy = $sum_x = $sum_y = $sum_x2 = $n = 0;
577
+        foreach ($this->statistics_tab as $gen=>$stats) {
578
+            if (!is_null($stats['avgBirth'])) {
579 579
                 $n++;
580
-                $sum_xy+=$gen*$stats['avgBirth'];
581
-                $sum_x+=$gen;
582
-                $sum_y+=$stats['avgBirth'];
583
-                $sum_x2+=$gen*$gen;
580
+                $sum_xy += $gen * $stats['avgBirth'];
581
+                $sum_x += $gen;
582
+                $sum_y += $stats['avgBirth'];
583
+                $sum_x2 += $gen * $gen;
584 584
             }
585 585
         }
586
-        $denom=($n*$sum_x2)-($sum_x*$sum_x);
587
-        if($denom!=0){
588
-            return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom);
586
+        $denom = ($n * $sum_x2) - ($sum_x * $sum_x);
587
+        if ($denom != 0) {
588
+            return -(($n * $sum_xy) - ($sum_x * $sum_y)) / ($denom);
589 589
         }
590 590
         return null;
591 591
     }
@@ -609,7 +609,7 @@  discard block
 block discarded – undo
609 609
      * @return array
610 610
      */
611 611
     public function getGenerationDepthStatsAtGen($gen) {
612
-        if(!$this->is_setup) return array();
612
+        if (!$this->is_setup) return array();
613 613
         $gen_depth_stats_raw = Database::prepare(
614 614
             'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'.
615 615
             '   sosa_list.majs_i_id as root_ancestor_id,'.
@@ -684,14 +684,14 @@  discard block
 block discarded – undo
684 684
      * @return array
685 685
      */
686 686
     public function getAncestorDispersionForGen($gen) {
687
-        if(!$this->is_setup || $gen > 11) return array();  // Going further than 11 gen will be out of range in the query
687
+        if (!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query
688 688
         return Database::prepare(
689 689
             'SELECT branches, count(i_id)'.
690 690
             ' FROM ('.
691 691
             '   SELECT i_id,'.
692 692
             '       CASE'.
693 693
             '           WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'.
694
-            '           ELSE -1'.   // We put all ancestors shared between some branches in the same bucket
694
+            '           ELSE -1'.// We put all ancestors shared between some branches in the same bucket
695 695
             '       END branches'.
696 696
             '   FROM ('.
697 697
             '       SELECT DISTINCT majs_i_id i_id,'.
@@ -724,7 +724,7 @@  discard block
 block discarded – undo
724 724
      * @return array 
725 725
      */
726 726
     public function getTopMultiSosaAncestorsNoTies($limit) {
727
-        if(!$this->is_setup) return array();
727
+        if (!$this->is_setup) return array();
728 728
         return Database::prepare(
729 729
             'SELECT sosa_i_id, sosa_count FROM ('.
730 730
             '   SELECT'.
@@ -737,20 +737,20 @@  discard block
 block discarded – undo
737 737
             '           COUNT(sosa.majs_sosa) sosa_count,'.
738 738
             '           MIN(sosa.majs_sosa) sosa_min'.
739 739
             '       FROM ##maj_sosa AS sosa'.
740
-            '       LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.   // Link to sosa's father
740
+            '       LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.// Link to sosa's father
741 741
             '           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
742 742
             '           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
743
-            '       LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.  // Link to sosa's mother
743
+            '       LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.// Link to sosa's mother
744 744
             '           AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'.
745 745
             '           AND sosa.majs_user_id = sosa_fat.majs_user_id'.
746 746
             '       WHERE sosa.majs_gedcom_id = :tree_id'.
747 747
             '       AND sosa.majs_user_id = :user_id'.
748
-            '       AND sosa_fat.majs_sosa IS NULL'.    // We keep only root individuals, i.e. those with no father or mother
748
+            '       AND sosa_fat.majs_sosa IS NULL'.// We keep only root individuals, i.e. those with no father or mother
749 749
             '       AND sosa_mot.majs_sosa IS NULL'. 
750 750
             '       GROUP BY sosa.majs_i_id'.
751
-            '       HAVING COUNT(sosa.majs_sosa) > 1'.   // Limit to the duplicate sosas.
751
+            '       HAVING COUNT(sosa.majs_sosa) > 1'.// Limit to the duplicate sosas.
752 752
             '       ORDER BY COUNT(sosa.majs_sosa) DESC'.
753
-            '       LIMIT ' . ($limit + 1) . // We want to select one more than required
753
+            '       LIMIT '.($limit + 1).// We want to select one more than required
754 754
             '   ) AS top_sosa,'.
755 755
             '   (SELECT @prev_count := 0, @keep := 0) x'.
756 756
             '   ORDER BY top_sosa.sosa_count ASC'.
Please login to merge, or discard this patch.