@@ -28,279 +28,279 @@ |
||
28 | 28 | */ |
29 | 29 | class SosaStatsController extends MvcController |
30 | 30 | { |
31 | - /** |
|
32 | - * Sosa Provider for the controller |
|
33 | - * @var SosaProvider $sosa_provider |
|
34 | - */ |
|
35 | - protected $sosa_provider; |
|
31 | + /** |
|
32 | + * Sosa Provider for the controller |
|
33 | + * @var SosaProvider $sosa_provider |
|
34 | + */ |
|
35 | + protected $sosa_provider; |
|
36 | 36 | |
37 | - /** |
|
38 | - * Constructor for SosaStatsController |
|
39 | - * @param AbstractModule $module |
|
40 | - */ |
|
41 | - public function __construct(AbstractModule $module) { |
|
42 | - parent::__construct($module); |
|
37 | + /** |
|
38 | + * Constructor for SosaStatsController |
|
39 | + * @param AbstractModule $module |
|
40 | + */ |
|
41 | + public function __construct(AbstractModule $module) { |
|
42 | + parent::__construct($module); |
|
43 | 43 | |
44 | - $this->sosa_provider = new SosaProvider(Globals::getTree(), Auth::user()); |
|
45 | - } |
|
44 | + $this->sosa_provider = new SosaProvider(Globals::getTree(), Auth::user()); |
|
45 | + } |
|
46 | 46 | |
47 | - /** |
|
48 | - * Pages |
|
49 | - */ |
|
47 | + /** |
|
48 | + * Pages |
|
49 | + */ |
|
50 | 50 | |
51 | - /** |
|
52 | - * SosaStats@index |
|
53 | - */ |
|
54 | - public function index() { |
|
55 | - $wt_tree = Globals::getTree(); |
|
56 | - $controller = new PageController(); |
|
57 | - $controller |
|
58 | - ->setPageTitle(I18N::translate('Sosa Statistics')) |
|
59 | - ->addInlineJavascript('$(".help_tooltip").tooltip();') |
|
60 | - ; |
|
51 | + /** |
|
52 | + * SosaStats@index |
|
53 | + */ |
|
54 | + public function index() { |
|
55 | + $wt_tree = Globals::getTree(); |
|
56 | + $controller = new PageController(); |
|
57 | + $controller |
|
58 | + ->setPageTitle(I18N::translate('Sosa Statistics')) |
|
59 | + ->addInlineJavascript('$(".help_tooltip").tooltip();') |
|
60 | + ; |
|
61 | 61 | |
62 | - $view_bag = new ViewBag(); |
|
63 | - $view_bag->set('title', $controller->getPageTitle()); |
|
64 | - $view_bag->set('is_setup', false); |
|
62 | + $view_bag = new ViewBag(); |
|
63 | + $view_bag->set('title', $controller->getPageTitle()); |
|
64 | + $view_bag->set('is_setup', false); |
|
65 | 65 | |
66 | - if($this->sosa_provider->isSetup()) { |
|
67 | - $view_bag->set('is_setup', true); |
|
66 | + if($this->sosa_provider->isSetup()) { |
|
67 | + $view_bag->set('is_setup', true); |
|
68 | 68 | |
69 | - $view_bag->set('root_indi', $this->sosa_provider->getRootIndi()); |
|
69 | + $view_bag->set('root_indi', $this->sosa_provider->getRootIndi()); |
|
70 | 70 | |
71 | - $sosaCount = $this->sosa_provider->getSosaCount(); |
|
72 | - $diffSosaCount = $this->sosa_provider->getDifferentSosaCount(); |
|
71 | + $sosaCount = $this->sosa_provider->getSosaCount(); |
|
72 | + $diffSosaCount = $this->sosa_provider->getDifferentSosaCount(); |
|
73 | 73 | |
74 | - $general_stats = array( |
|
75 | - 'sosa_count' => $sosaCount, |
|
76 | - 'distinct_count' => $diffSosaCount, |
|
77 | - 'sosa_rate' => Functions::safeDivision($diffSosaCount, $this->sosa_provider->getTotalIndividuals()), |
|
78 | - 'pedi_collapse' => 1 - Functions::safeDivision($diffSosaCount, $sosaCount), |
|
79 | - 'mean_gen_time' => $this->sosa_provider->getMeanGenerationTime() |
|
80 | - ); |
|
81 | - $view_bag->set('general_stats', $general_stats); |
|
74 | + $general_stats = array( |
|
75 | + 'sosa_count' => $sosaCount, |
|
76 | + 'distinct_count' => $diffSosaCount, |
|
77 | + 'sosa_rate' => Functions::safeDivision($diffSosaCount, $this->sosa_provider->getTotalIndividuals()), |
|
78 | + 'pedi_collapse' => 1 - Functions::safeDivision($diffSosaCount, $sosaCount), |
|
79 | + 'mean_gen_time' => $this->sosa_provider->getMeanGenerationTime() |
|
80 | + ); |
|
81 | + $view_bag->set('general_stats', $general_stats); |
|
82 | 82 | |
83 | - $stats_gen = $this->sosa_provider->getStatisticsByGeneration(); |
|
84 | - $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen='); |
|
85 | - $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen='); |
|
83 | + $stats_gen = $this->sosa_provider->getStatisticsByGeneration(); |
|
84 | + $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen='); |
|
85 | + $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen='); |
|
86 | 86 | |
87 | - $gen_theoretical=1; |
|
88 | - $total_theoretical=0; |
|
89 | - $prev_diff=0; |
|
90 | - $prev_known=0.5; |
|
91 | - $generation_stats = array(); |
|
87 | + $gen_theoretical=1; |
|
88 | + $total_theoretical=0; |
|
89 | + $prev_diff=0; |
|
90 | + $prev_known=0.5; |
|
91 | + $generation_stats = array(); |
|
92 | 92 | |
93 | - foreach($stats_gen as $gen => $tab){ |
|
94 | - $genY1= I18N::translate('-'); |
|
95 | - $genY2= I18N::translate('-'); |
|
96 | - if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth']; |
|
97 | - if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth']; |
|
98 | - $total_theoretical += $gen_theoretical; |
|
99 | - $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical); |
|
100 | - $missing=2*$prev_known - $tab['sosaCount']; |
|
101 | - $gen_diff=$tab['diffSosaTotalCount']-$prev_diff; |
|
93 | + foreach($stats_gen as $gen => $tab){ |
|
94 | + $genY1= I18N::translate('-'); |
|
95 | + $genY2= I18N::translate('-'); |
|
96 | + if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth']; |
|
97 | + if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth']; |
|
98 | + $total_theoretical += $gen_theoretical; |
|
99 | + $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical); |
|
100 | + $missing=2*$prev_known - $tab['sosaCount']; |
|
101 | + $gen_diff=$tab['diffSosaTotalCount']-$prev_diff; |
|
102 | 102 | |
103 | - $generation_stats[$gen] = array( |
|
104 | - 'gen_min_birth' => $genY1, |
|
105 | - 'gen_max_birth' => $genY2, |
|
106 | - 'theoretical' => $gen_theoretical, |
|
107 | - 'known' => $tab['sosaCount'], |
|
108 | - 'perc_known' => $perc_sosa_count_theor, |
|
109 | - 'missing' => $missing, |
|
110 | - 'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known), |
|
111 | - 'total_known' => $tab['sosaTotalCount'], |
|
112 | - 'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical), |
|
113 | - 'different' => $gen_diff, |
|
114 | - 'perc_different' => Functions::safeDivision($gen_diff, $tab['sosaCount']), |
|
115 | - 'total_different' => $tab['diffSosaTotalCount'], |
|
116 | - 'pedi_collapse' => 1 - Functions::safeDivision($tab['diffSosaTotalCount'], $tab['sosaTotalCount']) |
|
117 | - ); |
|
103 | + $generation_stats[$gen] = array( |
|
104 | + 'gen_min_birth' => $genY1, |
|
105 | + 'gen_max_birth' => $genY2, |
|
106 | + 'theoretical' => $gen_theoretical, |
|
107 | + 'known' => $tab['sosaCount'], |
|
108 | + 'perc_known' => $perc_sosa_count_theor, |
|
109 | + 'missing' => $missing, |
|
110 | + 'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known), |
|
111 | + 'total_known' => $tab['sosaTotalCount'], |
|
112 | + 'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical), |
|
113 | + 'different' => $gen_diff, |
|
114 | + 'perc_different' => Functions::safeDivision($gen_diff, $tab['sosaCount']), |
|
115 | + 'total_different' => $tab['diffSosaTotalCount'], |
|
116 | + 'pedi_collapse' => 1 - Functions::safeDivision($tab['diffSosaTotalCount'], $tab['sosaTotalCount']) |
|
117 | + ); |
|
118 | 118 | |
119 | - $gen_theoretical = $gen_theoretical * 2; |
|
120 | - $prev_known=$tab['sosaCount']; |
|
121 | - $prev_diff=$tab['diffSosaTotalCount']; |
|
122 | - } |
|
119 | + $gen_theoretical = $gen_theoretical * 2; |
|
120 | + $prev_known=$tab['sosaCount']; |
|
121 | + $prev_diff=$tab['diffSosaTotalCount']; |
|
122 | + } |
|
123 | 123 | |
124 | - $view_bag->set('generation_stats', $generation_stats); |
|
124 | + $view_bag->set('generation_stats', $generation_stats); |
|
125 | 125 | |
126 | - $gen_depth_stats = $this->sosa_provider->getGenerationDepthStatsAtGen(1); |
|
127 | - $view_bag->set('mean_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['mean_gen_depth'] : 0); |
|
128 | - $view_bag->set('stddev_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['stddev_gen_depth'] : 0); |
|
126 | + $gen_depth_stats = $this->sosa_provider->getGenerationDepthStatsAtGen(1); |
|
127 | + $view_bag->set('mean_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['mean_gen_depth'] : 0); |
|
128 | + $view_bag->set('stddev_gen_depth', count($gen_depth_stats) > 0 ? $gen_depth_stats[1]['stddev_gen_depth'] : 0); |
|
129 | 129 | |
130 | - $view_bag->set('top10multiancestors', $this->getTop10Ancestors()); |
|
130 | + $view_bag->set('top10multiancestors', $this->getTop10Ancestors()); |
|
131 | 131 | |
132 | - $view_bag->set('chart_img_g2', $this->htmlAncestorDispersionG2()); |
|
133 | - $view_bag->set('chart_img_g3', $this->htmlAncestorDispersionG3()); |
|
132 | + $view_bag->set('chart_img_g2', $this->htmlAncestorDispersionG2()); |
|
133 | + $view_bag->set('chart_img_g3', $this->htmlAncestorDispersionG3()); |
|
134 | 134 | |
135 | - $view_bag->set('chart_img_gendepth3', $this->htmlAncestorGenDepthG3()); |
|
136 | - //$view_bag->set('mean_gen_depth_gen3_stats', $this->sosa_provider->getMeanGeneratuonDepthAndDeviationAtGen(3)); |
|
137 | - } |
|
135 | + $view_bag->set('chart_img_gendepth3', $this->htmlAncestorGenDepthG3()); |
|
136 | + //$view_bag->set('mean_gen_depth_gen3_stats', $this->sosa_provider->getMeanGeneratuonDepthAndDeviationAtGen(3)); |
|
137 | + } |
|
138 | 138 | |
139 | - ViewFactory::make('SosaStats', $this, $controller, $view_bag)->render(); |
|
140 | - } |
|
139 | + ViewFactory::make('SosaStats', $this, $controller, $view_bag)->render(); |
|
140 | + } |
|
141 | 141 | |
142 | - /** |
|
143 | - * Return an array of the top 10 of ancestor appearing multiple times, grouped by the number of occurrences. |
|
144 | - * The key is the number of appearance, and the value contains the list of Inidvidual |
|
145 | - * |
|
146 | - * @return array Top 10 ancestors with count |
|
147 | - */ |
|
148 | - private function getTop10Ancestors() |
|
149 | - { |
|
150 | - $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10); |
|
151 | - $top10ancestors = array(); |
|
152 | - if($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | - foreach($top10multiancestors as $pid => $count) { |
|
154 | - $indi = Individual::getInstance($pid, $this->sosa_provider->getTree()); |
|
155 | - if($indi !== null && $indi->canShowName()) { |
|
156 | - array_key_exists($count, $top10ancestors) ? |
|
157 | - $top10ancestors[$count][] = $indi: |
|
158 | - $top10ancestors[$count] = array($count => $indi); |
|
159 | - } |
|
160 | - } |
|
161 | - } |
|
162 | - return $top10ancestors; |
|
163 | - } |
|
142 | + /** |
|
143 | + * Return an array of the top 10 of ancestor appearing multiple times, grouped by the number of occurrences. |
|
144 | + * The key is the number of appearance, and the value contains the list of Inidvidual |
|
145 | + * |
|
146 | + * @return array Top 10 ancestors with count |
|
147 | + */ |
|
148 | + private function getTop10Ancestors() |
|
149 | + { |
|
150 | + $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10); |
|
151 | + $top10ancestors = array(); |
|
152 | + if($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | + foreach($top10multiancestors as $pid => $count) { |
|
154 | + $indi = Individual::getInstance($pid, $this->sosa_provider->getTree()); |
|
155 | + if($indi !== null && $indi->canShowName()) { |
|
156 | + array_key_exists($count, $top10ancestors) ? |
|
157 | + $top10ancestors[$count][] = $indi: |
|
158 | + $top10ancestors[$count] = array($count => $indi); |
|
159 | + } |
|
160 | + } |
|
161 | + } |
|
162 | + return $top10ancestors; |
|
163 | + } |
|
164 | 164 | |
165 | - /** |
|
166 | - * Returns HTML code for a graph showing the dispersion of ancestors across father & mother |
|
167 | - * @return string HTML code |
|
168 | - */ |
|
169 | - private function htmlAncestorDispersionG2() |
|
170 | - { |
|
171 | - $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2); |
|
172 | - if(count($ancestorsDispGen2) == 0) return; |
|
165 | + /** |
|
166 | + * Returns HTML code for a graph showing the dispersion of ancestors across father & mother |
|
167 | + * @return string HTML code |
|
168 | + */ |
|
169 | + private function htmlAncestorDispersionG2() |
|
170 | + { |
|
171 | + $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2); |
|
172 | + if(count($ancestorsDispGen2) == 0) return; |
|
173 | 173 | |
174 | - $size = '600x300'; |
|
174 | + $size = '600x300'; |
|
175 | 175 | |
176 | - $total = array_sum($ancestorsDispGen2); |
|
177 | - $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
|
178 | - $father = array ( |
|
179 | - 'color' => '84beff', |
|
180 | - 'count' => $father_count, |
|
181 | - 'perc' => Functions::safeDivision($father_count, $total), |
|
182 | - 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat') |
|
183 | - ); |
|
184 | - $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
|
185 | - $mother = array ( |
|
186 | - 'color' => 'ffd1dc', |
|
187 | - 'count' => $mother_count, |
|
188 | - 'perc' => Functions::safeDivision($mother_count, $total), |
|
189 | - 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot') |
|
190 | - ); |
|
191 | - $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
|
192 | - $shared = array ( |
|
193 | - 'color' => '777777', |
|
194 | - 'count' => $shared_count, |
|
195 | - 'perc' => Functions::safeDivision($shared_count, $total), |
|
196 | - 'name' => I18N::translate('Shared') |
|
197 | - ); |
|
176 | + $total = array_sum($ancestorsDispGen2); |
|
177 | + $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
|
178 | + $father = array ( |
|
179 | + 'color' => '84beff', |
|
180 | + 'count' => $father_count, |
|
181 | + 'perc' => Functions::safeDivision($father_count, $total), |
|
182 | + 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat') |
|
183 | + ); |
|
184 | + $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
|
185 | + $mother = array ( |
|
186 | + 'color' => 'ffd1dc', |
|
187 | + 'count' => $mother_count, |
|
188 | + 'perc' => Functions::safeDivision($mother_count, $total), |
|
189 | + 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot') |
|
190 | + ); |
|
191 | + $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
|
192 | + $shared = array ( |
|
193 | + 'color' => '777777', |
|
194 | + 'count' => $shared_count, |
|
195 | + 'perc' => Functions::safeDivision($shared_count, $total), |
|
196 | + 'name' => I18N::translate('Shared') |
|
197 | + ); |
|
198 | 198 | |
199 | - $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc'])); |
|
200 | - $chart_title = I18N::translate('Known Sosa ancestors\' dispersion'); |
|
201 | - $chl = |
|
202 | - $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' . |
|
203 | - $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' . |
|
204 | - $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1); |
|
205 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
206 | - } |
|
199 | + $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc'])); |
|
200 | + $chart_title = I18N::translate('Known Sosa ancestors\' dispersion'); |
|
201 | + $chl = |
|
202 | + $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' . |
|
203 | + $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' . |
|
204 | + $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1); |
|
205 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
206 | + } |
|
207 | 207 | |
208 | - /** |
|
209 | - * Returns HTML code for a graph showing the dispersion of ancestors across grand-parents |
|
210 | - * @return string HTML code |
|
211 | - */ |
|
212 | - private function htmlAncestorDispersionG3() |
|
213 | - { |
|
214 | - $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(3); |
|
208 | + /** |
|
209 | + * Returns HTML code for a graph showing the dispersion of ancestors across grand-parents |
|
210 | + * @return string HTML code |
|
211 | + */ |
|
212 | + private function htmlAncestorDispersionG3() |
|
213 | + { |
|
214 | + $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(3); |
|
215 | 215 | |
216 | - $size = '700x300'; |
|
216 | + $size = '700x300'; |
|
217 | 217 | |
218 | - $color_motmot = 'ffd1dc'; |
|
219 | - $color_motfat = 'b998a0'; |
|
220 | - $color_fatfat = '577292'; |
|
221 | - $color_fatmot = '84beff'; |
|
222 | - $color_shared = '777777'; |
|
218 | + $color_motmot = 'ffd1dc'; |
|
219 | + $color_motfat = 'b998a0'; |
|
220 | + $color_fatfat = '577292'; |
|
221 | + $color_fatmot = '84beff'; |
|
222 | + $color_shared = '777777'; |
|
223 | 223 | |
224 | - $total_fatfat = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
|
225 | - $total_fatmot = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
|
226 | - $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0; |
|
227 | - $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0; |
|
228 | - $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
|
229 | - $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha; |
|
224 | + $total_fatfat = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
|
225 | + $total_fatmot = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
|
226 | + $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0; |
|
227 | + $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0; |
|
228 | + $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
|
229 | + $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha; |
|
230 | 230 | |
231 | - $chd = $this->arrayToExtendedEncoding(array( |
|
232 | - 4095 * Functions::safeDivision($total_fatfat, $total), |
|
233 | - 4095 * Functions::safeDivision($total_fatmot, $total), |
|
234 | - 4095 * Functions::safeDivision($total_sha, $total), |
|
235 | - 4095 * Functions::safeDivision($total_motfat, $total), |
|
236 | - 4095 * Functions::safeDivision($total_motmot, $total) |
|
237 | - )); |
|
238 | - $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3'); |
|
239 | - $chl = |
|
240 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' . |
|
241 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' . |
|
242 | - I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' . |
|
243 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' . |
|
244 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
245 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
246 | - } |
|
231 | + $chd = $this->arrayToExtendedEncoding(array( |
|
232 | + 4095 * Functions::safeDivision($total_fatfat, $total), |
|
233 | + 4095 * Functions::safeDivision($total_fatmot, $total), |
|
234 | + 4095 * Functions::safeDivision($total_sha, $total), |
|
235 | + 4095 * Functions::safeDivision($total_motfat, $total), |
|
236 | + 4095 * Functions::safeDivision($total_motmot, $total) |
|
237 | + )); |
|
238 | + $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3'); |
|
239 | + $chl = |
|
240 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' . |
|
241 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' . |
|
242 | + I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' . |
|
243 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' . |
|
244 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
245 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
246 | + } |
|
247 | 247 | |
248 | - /** |
|
249 | - * Returns HTML code for a graph showing the grand-parents' mean generation depth and standard deviation |
|
250 | - * @return string HTML code |
|
251 | - */ |
|
252 | - private function htmlAncestorGenDepthG3() { |
|
253 | - $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3); |
|
254 | - if(count($ancestorsGenDepth3) == 0) return; |
|
248 | + /** |
|
249 | + * Returns HTML code for a graph showing the grand-parents' mean generation depth and standard deviation |
|
250 | + * @return string HTML code |
|
251 | + */ |
|
252 | + private function htmlAncestorGenDepthG3() { |
|
253 | + $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3); |
|
254 | + if(count($ancestorsGenDepth3) == 0) return; |
|
255 | 255 | |
256 | - $ancestors = array(); |
|
257 | - $chd_mean = array(); |
|
258 | - $chd_error_low = array(); |
|
259 | - $chd_error_high = array(); |
|
260 | - foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
261 | - $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree()); |
|
262 | - if($ancestor !== null && $ancestor->canShowName()) { |
|
263 | - $tmp = $ancestor->getAllNames(); |
|
264 | - $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']); |
|
265 | - } |
|
266 | - else { |
|
267 | - $ancestors[] = I18N::translate('Sosa %s', I18N::number($sosa)); |
|
268 | - } |
|
269 | - $chd_mean[] = $genDepthStat['mean_gen_depth']; |
|
270 | - $chd_error_low[] = max(0, $genDepthStat['mean_gen_depth'] - $genDepthStat['stddev_gen_depth']); |
|
271 | - $chd_error_high[] = $genDepthStat['mean_gen_depth'] + $genDepthStat['stddev_gen_depth']; |
|
272 | - } |
|
256 | + $ancestors = array(); |
|
257 | + $chd_mean = array(); |
|
258 | + $chd_error_low = array(); |
|
259 | + $chd_error_high = array(); |
|
260 | + foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
261 | + $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree()); |
|
262 | + if($ancestor !== null && $ancestor->canShowName()) { |
|
263 | + $tmp = $ancestor->getAllNames(); |
|
264 | + $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']); |
|
265 | + } |
|
266 | + else { |
|
267 | + $ancestors[] = I18N::translate('Sosa %s', I18N::number($sosa)); |
|
268 | + } |
|
269 | + $chd_mean[] = $genDepthStat['mean_gen_depth']; |
|
270 | + $chd_error_low[] = max(0, $genDepthStat['mean_gen_depth'] - $genDepthStat['stddev_gen_depth']); |
|
271 | + $chd_error_high[] = $genDepthStat['mean_gen_depth'] + $genDepthStat['stddev_gen_depth']; |
|
272 | + } |
|
273 | 273 | |
274 | - $maxChd = ceil(max($chd_error_high)); |
|
275 | - $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high); |
|
276 | - $chxl = implode('|', array_reverse($ancestors)); |
|
277 | - $chbh = 30; |
|
278 | - $chs = count($ancestors) * $chbh + 50; |
|
279 | - $chxl_title = I18N::translate('Mean generation depth and standard deviation'); |
|
274 | + $maxChd = ceil(max($chd_error_high)); |
|
275 | + $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high); |
|
276 | + $chxl = implode('|', array_reverse($ancestors)); |
|
277 | + $chbh = 30; |
|
278 | + $chs = count($ancestors) * $chbh + 50; |
|
279 | + $chxl_title = I18N::translate('Mean generation depth and standard deviation'); |
|
280 | 280 | |
281 | - return "<img src=\"https://chart.googleapis.com/chart?cht=bhs&chco=84beff&chs=600x{$chs}&chbh={$chbh}&chd=t1:{$chd}&chds=0,{$maxChd}&chxt=x,x,y&chxl=1:|{$chxl_title}|2:|{$chxl}&chxp=1,50&chxr=0,0,{$maxChd},1&chm=E,577292,1:2,,2\" />"; |
|
282 | - } |
|
281 | + return "<img src=\"https://chart.googleapis.com/chart?cht=bhs&chco=84beff&chs=600x{$chs}&chbh={$chbh}&chd=t1:{$chd}&chds=0,{$maxChd}&chxt=x,x,y&chxl=1:|{$chxl_title}|2:|{$chxl}&chxp=1,50&chxr=0,0,{$maxChd},1&chm=E,577292,1:2,,2\" />"; |
|
282 | + } |
|
283 | 283 | |
284 | - /** |
|
285 | - * Convert an array to Google Chart encoding |
|
286 | - * @param arrat $a Array to encode |
|
287 | - * @return string |
|
288 | - */ |
|
289 | - private function arrayToExtendedEncoding($a) { |
|
290 | - $xencoding = WT_GOOGLE_CHART_ENCODING; |
|
284 | + /** |
|
285 | + * Convert an array to Google Chart encoding |
|
286 | + * @param arrat $a Array to encode |
|
287 | + * @return string |
|
288 | + */ |
|
289 | + private function arrayToExtendedEncoding($a) { |
|
290 | + $xencoding = WT_GOOGLE_CHART_ENCODING; |
|
291 | 291 | |
292 | - $encoding = ''; |
|
293 | - foreach ($a as $value) { |
|
294 | - if ($value < 0) { |
|
295 | - $value = 0; |
|
296 | - } |
|
297 | - $first = (int) ($value / 64); |
|
298 | - $second = $value % 64; |
|
299 | - $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second]; |
|
300 | - } |
|
292 | + $encoding = ''; |
|
293 | + foreach ($a as $value) { |
|
294 | + if ($value < 0) { |
|
295 | + $value = 0; |
|
296 | + } |
|
297 | + $first = (int) ($value / 64); |
|
298 | + $second = $value % 64; |
|
299 | + $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second]; |
|
300 | + } |
|
301 | 301 | |
302 | - return $encoding; |
|
303 | - } |
|
302 | + return $encoding; |
|
303 | + } |
|
304 | 304 | |
305 | 305 | |
306 | 306 | } |
307 | 307 | \ No newline at end of file |
@@ -63,7 +63,7 @@ discard block |
||
63 | 63 | $view_bag->set('title', $controller->getPageTitle()); |
64 | 64 | $view_bag->set('is_setup', false); |
65 | 65 | |
66 | - if($this->sosa_provider->isSetup()) { |
|
66 | + if ($this->sosa_provider->isSetup()) { |
|
67 | 67 | $view_bag->set('is_setup', true); |
68 | 68 | |
69 | 69 | $view_bag->set('root_indi', $this->sosa_provider->getRootIndi()); |
@@ -84,21 +84,21 @@ discard block |
||
84 | 84 | $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen='); |
85 | 85 | $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen='); |
86 | 86 | |
87 | - $gen_theoretical=1; |
|
88 | - $total_theoretical=0; |
|
89 | - $prev_diff=0; |
|
90 | - $prev_known=0.5; |
|
87 | + $gen_theoretical = 1; |
|
88 | + $total_theoretical = 0; |
|
89 | + $prev_diff = 0; |
|
90 | + $prev_known = 0.5; |
|
91 | 91 | $generation_stats = array(); |
92 | 92 | |
93 | - foreach($stats_gen as $gen => $tab){ |
|
94 | - $genY1= I18N::translate('-'); |
|
95 | - $genY2= I18N::translate('-'); |
|
96 | - if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth']; |
|
97 | - if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth']; |
|
93 | + foreach ($stats_gen as $gen => $tab) { |
|
94 | + $genY1 = I18N::translate('-'); |
|
95 | + $genY2 = I18N::translate('-'); |
|
96 | + if ($tab['firstBirth'] > 0) $genY1 = $tab['firstEstimatedBirth']; |
|
97 | + if ($tab['lastBirth'] > 0) $genY2 = $tab['lastEstimatedBirth']; |
|
98 | 98 | $total_theoretical += $gen_theoretical; |
99 | 99 | $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical); |
100 | - $missing=2*$prev_known - $tab['sosaCount']; |
|
101 | - $gen_diff=$tab['diffSosaTotalCount']-$prev_diff; |
|
100 | + $missing = 2 * $prev_known - $tab['sosaCount']; |
|
101 | + $gen_diff = $tab['diffSosaTotalCount'] - $prev_diff; |
|
102 | 102 | |
103 | 103 | $generation_stats[$gen] = array( |
104 | 104 | 'gen_min_birth' => $genY1, |
@@ -107,7 +107,7 @@ discard block |
||
107 | 107 | 'known' => $tab['sosaCount'], |
108 | 108 | 'perc_known' => $perc_sosa_count_theor, |
109 | 109 | 'missing' => $missing, |
110 | - 'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known), |
|
110 | + 'perc_missing' => 1 - Functions::safeDivision($tab['sosaCount'], 2 * $prev_known), |
|
111 | 111 | 'total_known' => $tab['sosaTotalCount'], |
112 | 112 | 'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical), |
113 | 113 | 'different' => $gen_diff, |
@@ -117,8 +117,8 @@ discard block |
||
117 | 117 | ); |
118 | 118 | |
119 | 119 | $gen_theoretical = $gen_theoretical * 2; |
120 | - $prev_known=$tab['sosaCount']; |
|
121 | - $prev_diff=$tab['diffSosaTotalCount']; |
|
120 | + $prev_known = $tab['sosaCount']; |
|
121 | + $prev_diff = $tab['diffSosaTotalCount']; |
|
122 | 122 | } |
123 | 123 | |
124 | 124 | $view_bag->set('generation_stats', $generation_stats); |
@@ -149,13 +149,12 @@ discard block |
||
149 | 149 | { |
150 | 150 | $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10); |
151 | 151 | $top10ancestors = array(); |
152 | - if($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | - foreach($top10multiancestors as $pid => $count) { |
|
152 | + if ($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | + foreach ($top10multiancestors as $pid => $count) { |
|
154 | 154 | $indi = Individual::getInstance($pid, $this->sosa_provider->getTree()); |
155 | - if($indi !== null && $indi->canShowName()) { |
|
155 | + if ($indi !== null && $indi->canShowName()) { |
|
156 | 156 | array_key_exists($count, $top10ancestors) ? |
157 | - $top10ancestors[$count][] = $indi: |
|
158 | - $top10ancestors[$count] = array($count => $indi); |
|
157 | + $top10ancestors[$count][] = $indi : $top10ancestors[$count] = array($count => $indi); |
|
159 | 158 | } |
160 | 159 | } |
161 | 160 | } |
@@ -169,27 +168,27 @@ discard block |
||
169 | 168 | private function htmlAncestorDispersionG2() |
170 | 169 | { |
171 | 170 | $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2); |
172 | - if(count($ancestorsDispGen2) == 0) return; |
|
171 | + if (count($ancestorsDispGen2) == 0) return; |
|
173 | 172 | |
174 | 173 | $size = '600x300'; |
175 | 174 | |
176 | 175 | $total = array_sum($ancestorsDispGen2); |
177 | 176 | $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
178 | - $father = array ( |
|
177 | + $father = array( |
|
179 | 178 | 'color' => '84beff', |
180 | 179 | 'count' => $father_count, |
181 | 180 | 'perc' => Functions::safeDivision($father_count, $total), |
182 | 181 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat') |
183 | 182 | ); |
184 | 183 | $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
185 | - $mother = array ( |
|
184 | + $mother = array( |
|
186 | 185 | 'color' => 'ffd1dc', |
187 | 186 | 'count' => $mother_count, |
188 | 187 | 'perc' => Functions::safeDivision($mother_count, $total), |
189 | 188 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot') |
190 | 189 | ); |
191 | 190 | $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
192 | - $shared = array ( |
|
191 | + $shared = array( |
|
193 | 192 | 'color' => '777777', |
194 | 193 | 'count' => $shared_count, |
195 | 194 | 'perc' => Functions::safeDivision($shared_count, $total), |
@@ -199,10 +198,10 @@ discard block |
||
199 | 198 | $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc'])); |
200 | 199 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion'); |
201 | 200 | $chl = |
202 | - $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' . |
|
203 | - $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' . |
|
204 | - $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1); |
|
205 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
201 | + $father['name'].' - '.I18N::percentage($father['perc'], 1).'|'. |
|
202 | + $shared['name'].' - '.I18N::percentage($shared['perc'], 1).'|'. |
|
203 | + $mother['name'].' - '.I18N::percentage($mother['perc'], 1); |
|
204 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
206 | 205 | } |
207 | 206 | |
208 | 207 | /** |
@@ -226,7 +225,7 @@ discard block |
||
226 | 225 | $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0; |
227 | 226 | $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0; |
228 | 227 | $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
229 | - $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha; |
|
228 | + $total = $total_fatfat + $total_fatmot + $total_motfat + $total_motmot + $total_sha; |
|
230 | 229 | |
231 | 230 | $chd = $this->arrayToExtendedEncoding(array( |
232 | 231 | 4095 * Functions::safeDivision($total_fatfat, $total), |
@@ -237,12 +236,12 @@ discard block |
||
237 | 236 | )); |
238 | 237 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3'); |
239 | 238 | $chl = |
240 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' . |
|
241 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' . |
|
242 | - I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' . |
|
243 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' . |
|
244 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
245 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
239 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat').' - '.I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1).'|'. |
|
240 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot').' - '.I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1).'|'. |
|
241 | + I18N::translate('Shared').' - '.I18N::percentage(Functions::safeDivision($total_sha, $total), 1).'|'. |
|
242 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat').' - '.I18N::percentage(Functions::safeDivision($total_motfat, $total), 1).'|'. |
|
243 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot').' - '.I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
244 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
246 | 245 | } |
247 | 246 | |
248 | 247 | /** |
@@ -251,15 +250,15 @@ discard block |
||
251 | 250 | */ |
252 | 251 | private function htmlAncestorGenDepthG3() { |
253 | 252 | $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3); |
254 | - if(count($ancestorsGenDepth3) == 0) return; |
|
253 | + if (count($ancestorsGenDepth3) == 0) return; |
|
255 | 254 | |
256 | 255 | $ancestors = array(); |
257 | 256 | $chd_mean = array(); |
258 | 257 | $chd_error_low = array(); |
259 | 258 | $chd_error_high = array(); |
260 | - foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
259 | + foreach ($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
261 | 260 | $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree()); |
262 | - if($ancestor !== null && $ancestor->canShowName()) { |
|
261 | + if ($ancestor !== null && $ancestor->canShowName()) { |
|
263 | 262 | $tmp = $ancestor->getAllNames(); |
264 | 263 | $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']); |
265 | 264 | } |
@@ -272,7 +271,7 @@ discard block |
||
272 | 271 | } |
273 | 272 | |
274 | 273 | $maxChd = ceil(max($chd_error_high)); |
275 | - $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high); |
|
274 | + $chd = implode(',', $chd_mean).'|'.implode(',', $chd_error_low).'|'.implode(',', $chd_error_high); |
|
276 | 275 | $chxl = implode('|', array_reverse($ancestors)); |
277 | 276 | $chbh = 30; |
278 | 277 | $chs = count($ancestors) * $chbh + 50; |
@@ -294,9 +293,9 @@ discard block |
||
294 | 293 | if ($value < 0) { |
295 | 294 | $value = 0; |
296 | 295 | } |
297 | - $first = (int) ($value / 64); |
|
296 | + $first = (int)($value / 64); |
|
298 | 297 | $second = $value % 64; |
299 | - $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second]; |
|
298 | + $encoding .= $xencoding[(int)$first].$xencoding[(int)$second]; |
|
300 | 299 | } |
301 | 300 | |
302 | 301 | return $encoding; |
@@ -31,11 +31,11 @@ discard block |
||
31 | 31 | <?php |
32 | 32 | /** @var \Fisharebest\Webtrees\Individual $root_indi */ |
33 | 33 | $root_indi = $this->data->get('root_indi'); |
34 | - if($root_indi !== null && $root_indi->canShowName()) { ?> |
|
34 | + if ($root_indi !== null && $root_indi->canShowName()) { ?> |
|
35 | 35 | <h4 class="center"><?= I18N::translate('%s: %s', I18N::translate('Root individual'), $root_indi->getFullName()); ?><h4> |
36 | 36 | <?php } ?> |
37 | 37 | |
38 | - <?php if($this->data->get('is_setup')) { |
|
38 | + <?php if ($this->data->get('is_setup')) { |
|
39 | 39 | $general_stats = $this->data->get('general_stats'); ?> |
40 | 40 | <h3><?php echo I18N::translate('General statistics'); ?></h3> |
41 | 41 | <div class="maj-table"> |
@@ -57,7 +57,7 @@ discard block |
||
57 | 57 | </div> |
58 | 58 | <div class="maj-row"> |
59 | 59 | <div class="label"><?php echo I18N::translate('Generation mean duration'); ?></div> |
60 | - <div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'], I18N::number($general_stats['mean_gen_time'], 1)); ?></div> |
|
60 | + <div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'], I18N::number($general_stats['mean_gen_time'], 1)); ?></div> |
|
61 | 61 | </div> |
62 | 62 | </div> |
63 | 63 | |
@@ -97,7 +97,7 @@ discard block |
||
97 | 97 | </tr> |
98 | 98 | </thead> |
99 | 99 | <tbody> |
100 | - <?php foreach($this->data->get('generation_stats') as $gen => $row) { ?> |
|
100 | + <?php foreach ($this->data->get('generation_stats') as $gen => $row) { ?> |
|
101 | 101 | <tr class="maj-row"> |
102 | 102 | <td class="label"><?php echo I18N::translate('<strong>G%d</strong>', $gen); ?></td> |
103 | 103 | <td class="label"><?php echo I18N::translate('%1$s <> %2$s', $row['gen_min_birth'], $row['gen_max_birth']); ?></td> |
@@ -111,7 +111,7 @@ discard block |
||
111 | 111 | <td class="value"><?php echo I18N::number($row['different']); ?></td> |
112 | 112 | <td class="value left percent_container"> |
113 | 113 | <div class="percent_frame"> |
114 | - <div class="percent_cell" style="width:<?php echo 100*$row['perc_different'] ?>%;"> |
|
114 | + <div class="percent_cell" style="width:<?php echo 100 * $row['perc_different'] ?>%;"> |
|
115 | 115 | <?php echo I18N::percentage($row['perc_different']); ?> |
116 | 116 | </div> |
117 | 117 | </div> |
@@ -131,17 +131,17 @@ discard block |
||
131 | 131 | I18N::translate('%s generation'), |
132 | 132 | I18N::translate('%s generations'), |
133 | 133 | $this->data->get('mean_gen_depth'), |
134 | - I18N::number($this->data->get('mean_gen_depth'),2) |
|
134 | + I18N::number($this->data->get('mean_gen_depth'), 2) |
|
135 | 135 | ) |
136 | 136 | ). |
137 | - ' — ' . |
|
137 | + ' — '. |
|
138 | 138 | I18N::translate( |
139 | 139 | 'Standard deviation: %s', |
140 | 140 | I18N::plural( |
141 | 141 | I18N::translate('%s generation'), |
142 | 142 | I18N::translate('%s generations'), |
143 | 143 | $this->data->get('stddev_gen_depth'), |
144 | - I18N::number($this->data->get('stddev_gen_depth'),2) |
|
144 | + I18N::number($this->data->get('stddev_gen_depth'), 2) |
|
145 | 145 | ) |
146 | 146 | ); |
147 | 147 | ?> |
@@ -153,17 +153,17 @@ discard block |
||
153 | 153 | |
154 | 154 | <?php |
155 | 155 | $top10_multi_ancestors = $this->data->get('top10multiancestors'); |
156 | - if(count($top10_multi_ancestors) > 0) { ?> |
|
156 | + if (count($top10_multi_ancestors) > 0) { ?> |
|
157 | 157 | <h3><?= I18N::translate('Most duplicated root Sosa ancestors'); ?></h3> |
158 | 158 | <div class="maj-table"> |
159 | - <?php foreach($top10_multi_ancestors as $count => $indis) { ?> |
|
159 | + <?php foreach ($top10_multi_ancestors as $count => $indis) { ?> |
|
160 | 160 | <div class="maj-row"> |
161 | 161 | <div class="label"><?= I18N::translate('%s times', I18N::number($count)); ?></div> |
162 | 162 | <div class="value"><?php |
163 | 163 | echo implode( |
164 | 164 | I18N::$list_separator, |
165 | 165 | array_map(function(Individual $indi) { |
166 | - return '<a href="'. $indi->getHtmlUrl(). '">'. $indi->getFullName() . ' ' . $indi->getSexImage() . '</a>'; |
|
166 | + return '<a href="'.$indi->getHtmlUrl().'">'.$indi->getFullName().' '.$indi->getSexImage().'</a>'; |
|
167 | 167 | }, $indis) |
168 | 168 | ); |
169 | 169 | ?></div> |
@@ -174,14 +174,14 @@ discard block |
||
174 | 174 | |
175 | 175 | <h3><?php echo I18N::translate('Known Sosa ancestors\' family dispersion'); ?></h3> |
176 | 176 | <div class="center"> |
177 | - <?php echo $this->data->get('chart_img_g2') ?: '' ; ?> |
|
178 | - <?php echo $this->data->get('chart_img_g3') ?: '' ; ?> |
|
177 | + <?php echo $this->data->get('chart_img_g2') ?: ''; ?> |
|
178 | + <?php echo $this->data->get('chart_img_g3') ?: ''; ?> |
|
179 | 179 | <!-- <canvas id="chart_ancestors_g2" width="300" height="300"></canvas> --> |
180 | 180 | </div> |
181 | 181 | |
182 | 182 | <h3><?php echo I18N::translate('Mean generation depth by grandparents'); ?></h3> |
183 | 183 | <div class="center"> |
184 | - <?php echo $this->data->get('chart_img_gendepth3') ?: '' ; ?> |
|
184 | + <?php echo $this->data->get('chart_img_gendepth3') ?: ''; ?> |
|
185 | 185 | </div> |
186 | 186 | |
187 | 187 | <?php } else { ?> |
@@ -22,413 +22,413 @@ discard block |
||
22 | 22 | */ |
23 | 23 | class SosaProvider { |
24 | 24 | |
25 | - /** |
|
26 | - * Maximum number of generation the database is able to hold. |
|
27 | - * @var int MAX_DB_GENERATIONS |
|
28 | - */ |
|
29 | - const MAX_DB_GENERATIONS = 64; |
|
30 | - |
|
31 | - /** |
|
32 | - * System's default user (ID -1 in the database |
|
33 | - * @var User $default_user |
|
34 | - */ |
|
35 | - protected static $default_user; |
|
36 | - |
|
37 | - /** |
|
38 | - * Reference user |
|
39 | - * @var User $user |
|
40 | - */ |
|
41 | - protected $user; |
|
42 | - |
|
43 | - /** |
|
44 | - * Reference tree |
|
45 | - * @var Tree $tree |
|
46 | - */ |
|
47 | - protected $tree; |
|
48 | - |
|
49 | - /** |
|
50 | - * Cached list of Sosa Individuals by generation |
|
51 | - * Format: key = generation, value = array ( sosa => Individual ID) |
|
52 | - * @var array $sosa_list_by_gen |
|
53 | - */ |
|
54 | - protected $sosa_list_by_gen; |
|
55 | - |
|
56 | - /** |
|
57 | - * Cached list of Sosa Families by generation |
|
58 | - * Format: key = generation, value = array ( sosa => Family ID) |
|
59 | - * @var unknown $sosa_fam_list_by_gen |
|
60 | - */ |
|
61 | - protected $sosa_fam_list_by_gen; |
|
62 | - |
|
63 | - /** |
|
64 | - * Cached array of statistics by generation |
|
65 | - * Format: key = generation, |
|
66 | - * value = array( |
|
67 | - * sosaCount, sosaTotalCount, diffSosaTotalCount, firstBirth, lastBirth, avgBirth |
|
68 | - * ) |
|
69 | - * @var array $statistics_tab |
|
70 | - */ |
|
71 | - protected $statistics_tab; |
|
72 | - |
|
73 | - /** |
|
74 | - * Has the provider's initialisation completed |
|
75 | - * @var bool $is_setup |
|
76 | - */ |
|
77 | - protected $is_setup; |
|
78 | - |
|
79 | - /** |
|
80 | - * Constructor for Sosa Provider. |
|
81 | - * A provider is defined in relation to a specific tree and reference user. |
|
82 | - * |
|
83 | - * @param Tree $tree |
|
84 | - * @param User $user |
|
85 | - */ |
|
86 | - public function __construct(Tree $tree, User $user = null) { |
|
87 | - if(self::$default_user === null) |
|
88 | - self::$default_user = User::find(-1); |
|
25 | + /** |
|
26 | + * Maximum number of generation the database is able to hold. |
|
27 | + * @var int MAX_DB_GENERATIONS |
|
28 | + */ |
|
29 | + const MAX_DB_GENERATIONS = 64; |
|
30 | + |
|
31 | + /** |
|
32 | + * System's default user (ID -1 in the database |
|
33 | + * @var User $default_user |
|
34 | + */ |
|
35 | + protected static $default_user; |
|
36 | + |
|
37 | + /** |
|
38 | + * Reference user |
|
39 | + * @var User $user |
|
40 | + */ |
|
41 | + protected $user; |
|
42 | + |
|
43 | + /** |
|
44 | + * Reference tree |
|
45 | + * @var Tree $tree |
|
46 | + */ |
|
47 | + protected $tree; |
|
48 | + |
|
49 | + /** |
|
50 | + * Cached list of Sosa Individuals by generation |
|
51 | + * Format: key = generation, value = array ( sosa => Individual ID) |
|
52 | + * @var array $sosa_list_by_gen |
|
53 | + */ |
|
54 | + protected $sosa_list_by_gen; |
|
55 | + |
|
56 | + /** |
|
57 | + * Cached list of Sosa Families by generation |
|
58 | + * Format: key = generation, value = array ( sosa => Family ID) |
|
59 | + * @var unknown $sosa_fam_list_by_gen |
|
60 | + */ |
|
61 | + protected $sosa_fam_list_by_gen; |
|
62 | + |
|
63 | + /** |
|
64 | + * Cached array of statistics by generation |
|
65 | + * Format: key = generation, |
|
66 | + * value = array( |
|
67 | + * sosaCount, sosaTotalCount, diffSosaTotalCount, firstBirth, lastBirth, avgBirth |
|
68 | + * ) |
|
69 | + * @var array $statistics_tab |
|
70 | + */ |
|
71 | + protected $statistics_tab; |
|
72 | + |
|
73 | + /** |
|
74 | + * Has the provider's initialisation completed |
|
75 | + * @var bool $is_setup |
|
76 | + */ |
|
77 | + protected $is_setup; |
|
78 | + |
|
79 | + /** |
|
80 | + * Constructor for Sosa Provider. |
|
81 | + * A provider is defined in relation to a specific tree and reference user. |
|
82 | + * |
|
83 | + * @param Tree $tree |
|
84 | + * @param User $user |
|
85 | + */ |
|
86 | + public function __construct(Tree $tree, User $user = null) { |
|
87 | + if(self::$default_user === null) |
|
88 | + self::$default_user = User::find(-1); |
|
89 | 89 | |
90 | - $this->tree = $tree; |
|
91 | - $this->user = $user; |
|
92 | - $this->is_setup = true; |
|
93 | - if($this->user === null) $this->user = Auth::user(); |
|
94 | - if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
90 | + $this->tree = $tree; |
|
91 | + $this->user = $user; |
|
92 | + $this->is_setup = true; |
|
93 | + if($this->user === null) $this->user = Auth::user(); |
|
94 | + if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
95 | 95 | |
96 | - // Check if the user, or the default user, has a root already setup; |
|
97 | - if(empty($this->getRootIndiId())) { |
|
98 | - if($this->user == self::$default_user) { // If the default user is not setup |
|
99 | - $this->is_setup = false; |
|
100 | - } |
|
101 | - else { |
|
102 | - $this->user = self::$default_user; |
|
103 | - $this->is_setup = $this->getRootIndiId() === null; |
|
104 | - } |
|
105 | - } |
|
106 | - } |
|
107 | - |
|
108 | - /** |
|
109 | - * Returns is the Provider has been successfully set up |
|
110 | - * @return bool |
|
111 | - */ |
|
112 | - public function isSetup() { |
|
113 | - return $this->is_setup; |
|
114 | - } |
|
115 | - |
|
116 | - /** |
|
117 | - * Return the reference tree |
|
118 | - * |
|
119 | - * @return Tree Reference tree |
|
120 | - */ |
|
121 | - public function getTree() { |
|
122 | - return $this->tree; |
|
123 | - } |
|
124 | - |
|
125 | - /** |
|
126 | - * Return the reference user |
|
127 | - * |
|
128 | - * @return User |
|
129 | - */ |
|
130 | - public function getUser() { |
|
131 | - return $this->user; |
|
132 | - } |
|
133 | - |
|
134 | - /** |
|
135 | - * Return the root individual ID for the reference tree and user. |
|
136 | - * @return string Individual ID |
|
137 | - */ |
|
138 | - public function getRootIndiId() { |
|
139 | - return $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID'); |
|
140 | - } |
|
141 | - |
|
142 | - /** |
|
143 | - * Return the root individual for the reference tree and user. |
|
144 | - * @return Individual Individual |
|
145 | - */ |
|
146 | - public function getRootIndi() { |
|
147 | - $root_indi_id = $this->getRootIndiId(); |
|
148 | - if(!empty($root_indi_id)) { |
|
149 | - return Individual::getInstance($root_indi_id, $this->tree); |
|
150 | - } |
|
151 | - return null; |
|
152 | - } |
|
96 | + // Check if the user, or the default user, has a root already setup; |
|
97 | + if(empty($this->getRootIndiId())) { |
|
98 | + if($this->user == self::$default_user) { // If the default user is not setup |
|
99 | + $this->is_setup = false; |
|
100 | + } |
|
101 | + else { |
|
102 | + $this->user = self::$default_user; |
|
103 | + $this->is_setup = $this->getRootIndiId() === null; |
|
104 | + } |
|
105 | + } |
|
106 | + } |
|
107 | + |
|
108 | + /** |
|
109 | + * Returns is the Provider has been successfully set up |
|
110 | + * @return bool |
|
111 | + */ |
|
112 | + public function isSetup() { |
|
113 | + return $this->is_setup; |
|
114 | + } |
|
115 | + |
|
116 | + /** |
|
117 | + * Return the reference tree |
|
118 | + * |
|
119 | + * @return Tree Reference tree |
|
120 | + */ |
|
121 | + public function getTree() { |
|
122 | + return $this->tree; |
|
123 | + } |
|
124 | + |
|
125 | + /** |
|
126 | + * Return the reference user |
|
127 | + * |
|
128 | + * @return User |
|
129 | + */ |
|
130 | + public function getUser() { |
|
131 | + return $this->user; |
|
132 | + } |
|
133 | + |
|
134 | + /** |
|
135 | + * Return the root individual ID for the reference tree and user. |
|
136 | + * @return string Individual ID |
|
137 | + */ |
|
138 | + public function getRootIndiId() { |
|
139 | + return $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID'); |
|
140 | + } |
|
141 | + |
|
142 | + /** |
|
143 | + * Return the root individual for the reference tree and user. |
|
144 | + * @return Individual Individual |
|
145 | + */ |
|
146 | + public function getRootIndi() { |
|
147 | + $root_indi_id = $this->getRootIndiId(); |
|
148 | + if(!empty($root_indi_id)) { |
|
149 | + return Individual::getInstance($root_indi_id, $this->tree); |
|
150 | + } |
|
151 | + return null; |
|
152 | + } |
|
153 | 153 | |
154 | - /***************** |
|
154 | + /***************** |
|
155 | 155 | * DATA CRUD LAYER |
156 | 156 | *****************/ |
157 | 157 | |
158 | - /** |
|
159 | - * Remove all Sosa entries related to the gedcom file and user |
|
160 | - */ |
|
161 | - public function deleteAll() { |
|
162 | - if(!$this->is_setup) return; |
|
163 | - Database::prepare( |
|
164 | - 'DELETE FROM `##maj_sosa`'. |
|
165 | - ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
|
166 | - ->execute(array( |
|
167 | - 'tree_id' => $this->tree->getTreeId(), |
|
168 | - 'user_id' => $this->user->getUserId() |
|
169 | - )); |
|
170 | - } |
|
171 | - |
|
172 | - /** |
|
173 | - * Remove all ancestors of a sosa number |
|
174 | - * |
|
175 | - * @param int $sosa |
|
176 | - */ |
|
177 | - public function deleteAncestors($sosa) { |
|
178 | - if(!$this->is_setup) return; |
|
179 | - $gen = Functions::getGeneration($sosa); |
|
180 | - Database::prepare( |
|
181 | - 'DELETE FROM `##maj_sosa`'. |
|
182 | - ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
|
183 | - ' AND majs_gen >= :gen' . |
|
184 | - ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
|
185 | - )->execute(array( |
|
186 | - 'tree_id' => $this->tree->getTreeId(), |
|
187 | - 'user_id' => $this->user->getUserId(), |
|
188 | - 'gen' => $gen, |
|
189 | - 'sosa' => $sosa |
|
190 | - )); |
|
191 | - } |
|
192 | - |
|
193 | - /** |
|
194 | - * Insert (or update if already existing) a list of Sosa individuals |
|
195 | - * @param array $sosa_records |
|
196 | - */ |
|
197 | - public function insertOrUpdate($sosa_records) { |
|
198 | - if(!$this->is_setup) return; |
|
158 | + /** |
|
159 | + * Remove all Sosa entries related to the gedcom file and user |
|
160 | + */ |
|
161 | + public function deleteAll() { |
|
162 | + if(!$this->is_setup) return; |
|
163 | + Database::prepare( |
|
164 | + 'DELETE FROM `##maj_sosa`'. |
|
165 | + ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
|
166 | + ->execute(array( |
|
167 | + 'tree_id' => $this->tree->getTreeId(), |
|
168 | + 'user_id' => $this->user->getUserId() |
|
169 | + )); |
|
170 | + } |
|
171 | + |
|
172 | + /** |
|
173 | + * Remove all ancestors of a sosa number |
|
174 | + * |
|
175 | + * @param int $sosa |
|
176 | + */ |
|
177 | + public function deleteAncestors($sosa) { |
|
178 | + if(!$this->is_setup) return; |
|
179 | + $gen = Functions::getGeneration($sosa); |
|
180 | + Database::prepare( |
|
181 | + 'DELETE FROM `##maj_sosa`'. |
|
182 | + ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
|
183 | + ' AND majs_gen >= :gen' . |
|
184 | + ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
|
185 | + )->execute(array( |
|
186 | + 'tree_id' => $this->tree->getTreeId(), |
|
187 | + 'user_id' => $this->user->getUserId(), |
|
188 | + 'gen' => $gen, |
|
189 | + 'sosa' => $sosa |
|
190 | + )); |
|
191 | + } |
|
192 | + |
|
193 | + /** |
|
194 | + * Insert (or update if already existing) a list of Sosa individuals |
|
195 | + * @param array $sosa_records |
|
196 | + */ |
|
197 | + public function insertOrUpdate($sosa_records) { |
|
198 | + if(!$this->is_setup) return; |
|
199 | 199 | |
200 | - $treeid = $this->tree->getTreeId(); |
|
201 | - $userid = $this->user->getUserId(); |
|
202 | - $questionmarks_table = array(); |
|
203 | - $values_table = array(); |
|
200 | + $treeid = $this->tree->getTreeId(); |
|
201 | + $userid = $this->user->getUserId(); |
|
202 | + $questionmarks_table = array(); |
|
203 | + $values_table = array(); |
|
204 | 204 | |
205 | - $i = 0; |
|
206 | - foreach ($sosa_records as $row) { |
|
207 | - $gen = Functions::getGeneration($row['sosa']); |
|
208 | - if($gen <= self::MAX_DB_GENERATIONS) { |
|
209 | - $questionmarks_table[] = |
|
210 | - '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')'; |
|
211 | - $values_table = array_merge( |
|
212 | - $values_table, |
|
213 | - array( |
|
214 | - 'tree_id'.$i => $treeid, |
|
215 | - 'user_id'.$i => $userid, |
|
216 | - 'sosa'.$i => $row['sosa'], |
|
217 | - 'indi_id'.$i => $row['indi'], |
|
218 | - 'gen'.$i => Functions::getGeneration($row['sosa']), |
|
219 | - 'byear'.$i => $row['birth_year'], |
|
220 | - 'byearest'.$i => $row['birth_year_est'], |
|
221 | - 'dyear'.$i => $row['death_year'], |
|
222 | - 'dyearest'.$i => $row['death_year_est'] |
|
223 | - ) |
|
224 | - ); |
|
225 | - } |
|
226 | - $i++; |
|
227 | - } |
|
205 | + $i = 0; |
|
206 | + foreach ($sosa_records as $row) { |
|
207 | + $gen = Functions::getGeneration($row['sosa']); |
|
208 | + if($gen <= self::MAX_DB_GENERATIONS) { |
|
209 | + $questionmarks_table[] = |
|
210 | + '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')'; |
|
211 | + $values_table = array_merge( |
|
212 | + $values_table, |
|
213 | + array( |
|
214 | + 'tree_id'.$i => $treeid, |
|
215 | + 'user_id'.$i => $userid, |
|
216 | + 'sosa'.$i => $row['sosa'], |
|
217 | + 'indi_id'.$i => $row['indi'], |
|
218 | + 'gen'.$i => Functions::getGeneration($row['sosa']), |
|
219 | + 'byear'.$i => $row['birth_year'], |
|
220 | + 'byearest'.$i => $row['birth_year_est'], |
|
221 | + 'dyear'.$i => $row['death_year'], |
|
222 | + 'dyearest'.$i => $row['death_year_est'] |
|
223 | + ) |
|
224 | + ); |
|
225 | + } |
|
226 | + $i++; |
|
227 | + } |
|
228 | 228 | |
229 | - $sql = 'REPLACE INTO `##maj_sosa`' . |
|
230 | - ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' . |
|
231 | - ' VALUES '. implode(',', $questionmarks_table); |
|
232 | - Database::prepare($sql)->execute($values_table); |
|
233 | - } |
|
229 | + $sql = 'REPLACE INTO `##maj_sosa`' . |
|
230 | + ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' . |
|
231 | + ' VALUES '. implode(',', $questionmarks_table); |
|
232 | + Database::prepare($sql)->execute($values_table); |
|
233 | + } |
|
234 | 234 | |
235 | - /**************** |
|
235 | + /**************** |
|
236 | 236 | * SIMPLE QUERIES |
237 | 237 | ****************/ |
238 | 238 | |
239 | - /** |
|
240 | - * Returns the list of Sosa numbers to which an individual is related. |
|
241 | - * Format: key = sosa number, value = generation for the Sosa number |
|
242 | - * |
|
243 | - * @param Individual $indi |
|
244 | - * @return array Array of sosa numbers |
|
245 | - */ |
|
246 | - public function getSosaNumbers(Individual $indi) { |
|
247 | - if(!$this->is_setup) return array(); |
|
248 | - return Database::prepare( |
|
249 | - 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
|
250 | - ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
|
251 | - )->execute(array( |
|
252 | - 'indi_id' => $indi->getXref(), |
|
253 | - 'tree_id' => $this->tree->getTreeId(), |
|
254 | - 'user_id' => $this->user->getUserId() |
|
255 | - ))->fetchAssoc(); |
|
256 | - } |
|
257 | - |
|
258 | - /** |
|
259 | - * Get the last generation of Sosa ancestors |
|
260 | - * |
|
261 | - * @return number Last generation if found, 1 otherwise |
|
262 | - */ |
|
263 | - public function getLastGeneration() { |
|
264 | - if(!$this->is_setup) return; |
|
265 | - return Database::prepare( |
|
266 | - 'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
|
267 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
|
268 | - )->execute(array( |
|
269 | - 'tree_id' => $this->tree->getTreeId(), |
|
270 | - 'user_id' => $this->user->getUserId() |
|
271 | - ))->fetchOne() ?: 1; |
|
272 | - } |
|
273 | - |
|
274 | - /************* |
|
239 | + /** |
|
240 | + * Returns the list of Sosa numbers to which an individual is related. |
|
241 | + * Format: key = sosa number, value = generation for the Sosa number |
|
242 | + * |
|
243 | + * @param Individual $indi |
|
244 | + * @return array Array of sosa numbers |
|
245 | + */ |
|
246 | + public function getSosaNumbers(Individual $indi) { |
|
247 | + if(!$this->is_setup) return array(); |
|
248 | + return Database::prepare( |
|
249 | + 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
|
250 | + ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
|
251 | + )->execute(array( |
|
252 | + 'indi_id' => $indi->getXref(), |
|
253 | + 'tree_id' => $this->tree->getTreeId(), |
|
254 | + 'user_id' => $this->user->getUserId() |
|
255 | + ))->fetchAssoc(); |
|
256 | + } |
|
257 | + |
|
258 | + /** |
|
259 | + * Get the last generation of Sosa ancestors |
|
260 | + * |
|
261 | + * @return number Last generation if found, 1 otherwise |
|
262 | + */ |
|
263 | + public function getLastGeneration() { |
|
264 | + if(!$this->is_setup) return; |
|
265 | + return Database::prepare( |
|
266 | + 'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
|
267 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
|
268 | + )->execute(array( |
|
269 | + 'tree_id' => $this->tree->getTreeId(), |
|
270 | + 'user_id' => $this->user->getUserId() |
|
271 | + ))->fetchOne() ?: 1; |
|
272 | + } |
|
273 | + |
|
274 | + /************* |
|
275 | 275 | * SOSA LISTS |
276 | 276 | *************/ |
277 | 277 | |
278 | - /** |
|
279 | - * Return the list of all sosas, with the generations it belongs to |
|
280 | - * |
|
281 | - * @return array Associative array of Sosa ancestors, with their generation, comma separated |
|
282 | - */ |
|
283 | - public function getAllSosaWithGenerations(){ |
|
284 | - if(!$this->is_setup) return array(); |
|
285 | - return Database::prepare( |
|
286 | - 'SELECT majs_i_id AS indi,' . |
|
287 | - ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
|
288 | - ' FROM `##maj_sosa`' . |
|
289 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
|
290 | - ' GROUP BY majs_i_id' |
|
291 | - )->execute(array( |
|
292 | - 'tree_id' => $this->tree->getTreeId(), |
|
293 | - 'user_id' => $this->user->getUserId() |
|
294 | - ))->fetchAssoc(); |
|
295 | - } |
|
296 | - |
|
297 | - /** |
|
298 | - * Get an associative array of Sosa individuals in generation G. Keys are Sosa numbers, values individuals. |
|
299 | - * |
|
300 | - * @param number $gen Generation |
|
301 | - * @return array Array of Sosa individuals |
|
302 | - */ |
|
303 | - public function getSosaListAtGeneration($gen){ |
|
304 | - if(!$this->is_setup) return array(); |
|
305 | - if(!$this->sosa_list_by_gen) |
|
306 | - $this->sosa_list_by_gen = array(); |
|
278 | + /** |
|
279 | + * Return the list of all sosas, with the generations it belongs to |
|
280 | + * |
|
281 | + * @return array Associative array of Sosa ancestors, with their generation, comma separated |
|
282 | + */ |
|
283 | + public function getAllSosaWithGenerations(){ |
|
284 | + if(!$this->is_setup) return array(); |
|
285 | + return Database::prepare( |
|
286 | + 'SELECT majs_i_id AS indi,' . |
|
287 | + ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
|
288 | + ' FROM `##maj_sosa`' . |
|
289 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
|
290 | + ' GROUP BY majs_i_id' |
|
291 | + )->execute(array( |
|
292 | + 'tree_id' => $this->tree->getTreeId(), |
|
293 | + 'user_id' => $this->user->getUserId() |
|
294 | + ))->fetchAssoc(); |
|
295 | + } |
|
296 | + |
|
297 | + /** |
|
298 | + * Get an associative array of Sosa individuals in generation G. Keys are Sosa numbers, values individuals. |
|
299 | + * |
|
300 | + * @param number $gen Generation |
|
301 | + * @return array Array of Sosa individuals |
|
302 | + */ |
|
303 | + public function getSosaListAtGeneration($gen){ |
|
304 | + if(!$this->is_setup) return array(); |
|
305 | + if(!$this->sosa_list_by_gen) |
|
306 | + $this->sosa_list_by_gen = array(); |
|
307 | 307 | |
308 | - if($gen){ |
|
309 | - if(!isset($this->sosa_list_by_gen[$gen])){ |
|
310 | - $this->sosa_list_by_gen[$gen] = Database::prepare( |
|
311 | - 'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
|
312 | - ' FROM `##maj_sosa`'. |
|
313 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
314 | - ' AND majs_gen = :gen'. |
|
315 | - ' ORDER BY majs_sosa ASC') |
|
316 | - ->execute(array( |
|
317 | - 'tree_id' => $this->tree->getTreeId(), |
|
318 | - 'user_id' => $this->user->getUserId(), |
|
319 | - 'gen' => $gen |
|
320 | - )) |
|
321 | - ->fetchAssoc(); |
|
322 | - } |
|
323 | - return $this->sosa_list_by_gen[$gen]; |
|
324 | - } |
|
325 | - return array(); |
|
326 | - } |
|
327 | - |
|
328 | - /** |
|
329 | - * Get an associative array of Sosa families in generation G. Keys are Sosa numbers for the husband, values families. |
|
330 | - * |
|
331 | - * @param number $gen Generation |
|
332 | - * @return array Array of Sosa families |
|
333 | - */ |
|
334 | - public function getFamilySosaListAtGeneration($gen){ |
|
335 | - if(!$this->is_setup) return array(); |
|
336 | - if(!$this->sosa_fam_list_by_gen) |
|
337 | - $this->sosa_fam_list_by_gen = array(); |
|
308 | + if($gen){ |
|
309 | + if(!isset($this->sosa_list_by_gen[$gen])){ |
|
310 | + $this->sosa_list_by_gen[$gen] = Database::prepare( |
|
311 | + 'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
|
312 | + ' FROM `##maj_sosa`'. |
|
313 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
314 | + ' AND majs_gen = :gen'. |
|
315 | + ' ORDER BY majs_sosa ASC') |
|
316 | + ->execute(array( |
|
317 | + 'tree_id' => $this->tree->getTreeId(), |
|
318 | + 'user_id' => $this->user->getUserId(), |
|
319 | + 'gen' => $gen |
|
320 | + )) |
|
321 | + ->fetchAssoc(); |
|
322 | + } |
|
323 | + return $this->sosa_list_by_gen[$gen]; |
|
324 | + } |
|
325 | + return array(); |
|
326 | + } |
|
327 | + |
|
328 | + /** |
|
329 | + * Get an associative array of Sosa families in generation G. Keys are Sosa numbers for the husband, values families. |
|
330 | + * |
|
331 | + * @param number $gen Generation |
|
332 | + * @return array Array of Sosa families |
|
333 | + */ |
|
334 | + public function getFamilySosaListAtGeneration($gen){ |
|
335 | + if(!$this->is_setup) return array(); |
|
336 | + if(!$this->sosa_fam_list_by_gen) |
|
337 | + $this->sosa_fam_list_by_gen = array(); |
|
338 | 338 | |
339 | - if($gen){ |
|
340 | - if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
341 | - $this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
|
342 | - 'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
|
343 | - ' FROM `##families`'. |
|
344 | - ' INNER JOIN `##maj_sosa` AS s1 ON (`##families`.f_husb = s1.majs_i_id AND `##families`.f_file = s1.majs_gedcom_id)'. |
|
345 | - ' INNER JOIN `##maj_sosa` AS s2 ON (`##families`.f_wife = s2.majs_i_id AND `##families`.f_file = s2.majs_gedcom_id)'. |
|
346 | - ' WHERE s1.majs_sosa + 1 = s2.majs_sosa'. |
|
347 | - ' AND s1.majs_gedcom_id= :tree_id AND s1.majs_user_id=:user_id'. |
|
348 | - ' AND s2.majs_gedcom_id= :tree_id AND s2.majs_user_id=:user_id'. |
|
349 | - ' AND s1.majs_gen = :gen'. |
|
350 | - ' ORDER BY s1.majs_sosa ASC' |
|
351 | - ) |
|
352 | - ->execute(array( |
|
353 | - 'tree_id' => $this->tree->getTreeId(), |
|
354 | - 'user_id' => $this->user->getUserId(), |
|
355 | - 'gen' => $gen |
|
356 | - )) |
|
357 | - ->fetchAssoc(); |
|
358 | - } |
|
359 | - return $this->sosa_fam_list_by_gen[$gen]; |
|
360 | - } |
|
361 | - return array(); |
|
362 | - } |
|
363 | - |
|
364 | - /** |
|
365 | - * Get an associative array of Sosa individuals in generation G who are missing parents. Keys are Sosa numbers, values individuals. |
|
366 | - * |
|
367 | - * @param number $gen Generation |
|
368 | - * @return array Array of Sosa individuals |
|
369 | - */ |
|
370 | - public function getMissingSosaListAtGeneration($gen){ |
|
371 | - if(!$this->is_setup) return array(); |
|
372 | - if($gen){ |
|
373 | - return $this->sosa_list_by_gen[$gen] = Database::prepare( |
|
374 | - 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
|
375 | - ' FROM `##maj_sosa` schild'. |
|
376 | - ' LEFT JOIN `##maj_sosa` sfat ON ((schild.majs_sosa * 2) = sfat.majs_sosa AND schild.majs_gedcom_id = sfat.majs_gedcom_id AND schild.majs_user_id = sfat.majs_user_id)'. |
|
377 | - ' LEFT JOIN `##maj_sosa` smot ON ((schild.majs_sosa * 2 + 1) = smot.majs_sosa AND schild.majs_gedcom_id = smot.majs_gedcom_id AND schild.majs_user_id = smot.majs_user_id)'. |
|
378 | - ' WHERE schild.majs_gedcom_id = :tree_id AND schild.majs_user_id = :user_id'. |
|
379 | - ' AND schild.majs_gen = :gen'. |
|
380 | - ' AND (sfat.majs_sosa IS NULL OR smot.majs_sosa IS NULL)'. |
|
381 | - ' ORDER BY schild.majs_sosa ASC') |
|
382 | - ->execute(array( |
|
383 | - 'tree_id' => $this->tree->getTreeId(), |
|
384 | - 'user_id' => $this->user->getUserId(), |
|
385 | - 'gen' => $gen - 1 |
|
386 | - ))->fetchAll(\PDO::FETCH_ASSOC); |
|
387 | - } |
|
388 | - return array(); |
|
389 | - } |
|
390 | - |
|
391 | - |
|
392 | - |
|
393 | - /************* |
|
339 | + if($gen){ |
|
340 | + if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
341 | + $this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
|
342 | + 'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
|
343 | + ' FROM `##families`'. |
|
344 | + ' INNER JOIN `##maj_sosa` AS s1 ON (`##families`.f_husb = s1.majs_i_id AND `##families`.f_file = s1.majs_gedcom_id)'. |
|
345 | + ' INNER JOIN `##maj_sosa` AS s2 ON (`##families`.f_wife = s2.majs_i_id AND `##families`.f_file = s2.majs_gedcom_id)'. |
|
346 | + ' WHERE s1.majs_sosa + 1 = s2.majs_sosa'. |
|
347 | + ' AND s1.majs_gedcom_id= :tree_id AND s1.majs_user_id=:user_id'. |
|
348 | + ' AND s2.majs_gedcom_id= :tree_id AND s2.majs_user_id=:user_id'. |
|
349 | + ' AND s1.majs_gen = :gen'. |
|
350 | + ' ORDER BY s1.majs_sosa ASC' |
|
351 | + ) |
|
352 | + ->execute(array( |
|
353 | + 'tree_id' => $this->tree->getTreeId(), |
|
354 | + 'user_id' => $this->user->getUserId(), |
|
355 | + 'gen' => $gen |
|
356 | + )) |
|
357 | + ->fetchAssoc(); |
|
358 | + } |
|
359 | + return $this->sosa_fam_list_by_gen[$gen]; |
|
360 | + } |
|
361 | + return array(); |
|
362 | + } |
|
363 | + |
|
364 | + /** |
|
365 | + * Get an associative array of Sosa individuals in generation G who are missing parents. Keys are Sosa numbers, values individuals. |
|
366 | + * |
|
367 | + * @param number $gen Generation |
|
368 | + * @return array Array of Sosa individuals |
|
369 | + */ |
|
370 | + public function getMissingSosaListAtGeneration($gen){ |
|
371 | + if(!$this->is_setup) return array(); |
|
372 | + if($gen){ |
|
373 | + return $this->sosa_list_by_gen[$gen] = Database::prepare( |
|
374 | + 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
|
375 | + ' FROM `##maj_sosa` schild'. |
|
376 | + ' LEFT JOIN `##maj_sosa` sfat ON ((schild.majs_sosa * 2) = sfat.majs_sosa AND schild.majs_gedcom_id = sfat.majs_gedcom_id AND schild.majs_user_id = sfat.majs_user_id)'. |
|
377 | + ' LEFT JOIN `##maj_sosa` smot ON ((schild.majs_sosa * 2 + 1) = smot.majs_sosa AND schild.majs_gedcom_id = smot.majs_gedcom_id AND schild.majs_user_id = smot.majs_user_id)'. |
|
378 | + ' WHERE schild.majs_gedcom_id = :tree_id AND schild.majs_user_id = :user_id'. |
|
379 | + ' AND schild.majs_gen = :gen'. |
|
380 | + ' AND (sfat.majs_sosa IS NULL OR smot.majs_sosa IS NULL)'. |
|
381 | + ' ORDER BY schild.majs_sosa ASC') |
|
382 | + ->execute(array( |
|
383 | + 'tree_id' => $this->tree->getTreeId(), |
|
384 | + 'user_id' => $this->user->getUserId(), |
|
385 | + 'gen' => $gen - 1 |
|
386 | + ))->fetchAll(\PDO::FETCH_ASSOC); |
|
387 | + } |
|
388 | + return array(); |
|
389 | + } |
|
390 | + |
|
391 | + |
|
392 | + |
|
393 | + /************* |
|
394 | 394 | * STATISTICS |
395 | 395 | *************/ |
396 | - /** |
|
397 | - * Get the statistic array detailed by generation. |
|
398 | - * Statistics for each generation are: |
|
399 | - * - The number of Sosa in generation |
|
400 | - * - The number of Sosa up to generation |
|
401 | - * - The number of distinct Sosa up to generation |
|
402 | - * - The year of the first birth in generation |
|
403 | - * - The year of the first estimated birth in generation |
|
404 | - * - The year of the last birth in generation |
|
405 | - * - The year of the last estimated birth in generation |
|
406 | - * - The average year of birth in generation |
|
407 | - * |
|
408 | - * @return array Statistics array |
|
409 | - */ |
|
410 | - public function getStatisticsByGeneration() { |
|
411 | - if(!$this->is_setup) return array(); |
|
412 | - if(!$this->statistics_tab) { |
|
413 | - $this->statistics_tab = array(); |
|
414 | - if($maxGeneration = $this->getLastGeneration()) { |
|
415 | - for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
|
416 | - $birthStats = $this->getStatsBirthYearInGeneration($gen); |
|
417 | - $this->statistics_tab[$gen] = array( |
|
418 | - 'sosaCount' => $this->getSosaCountAtGeneration($gen), |
|
419 | - 'sosaTotalCount' => $this->getSosaCountUpToGeneration($gen), |
|
420 | - 'diffSosaTotalCount' => $this->getDifferentSosaCountUpToGeneration($gen), |
|
421 | - 'firstBirth' => $birthStats['first'], |
|
422 | - 'firstEstimatedBirth' => $birthStats['first_est'], |
|
423 | - 'lastBirth' => $birthStats['last'], |
|
424 | - 'lastEstimatedBirth' => $birthStats['last_est'], |
|
425 | - 'avgBirth' => $birthStats['avg'] |
|
426 | - ); |
|
427 | - } |
|
428 | - } |
|
429 | - } |
|
430 | - return $this->statistics_tab; |
|
431 | - } |
|
396 | + /** |
|
397 | + * Get the statistic array detailed by generation. |
|
398 | + * Statistics for each generation are: |
|
399 | + * - The number of Sosa in generation |
|
400 | + * - The number of Sosa up to generation |
|
401 | + * - The number of distinct Sosa up to generation |
|
402 | + * - The year of the first birth in generation |
|
403 | + * - The year of the first estimated birth in generation |
|
404 | + * - The year of the last birth in generation |
|
405 | + * - The year of the last estimated birth in generation |
|
406 | + * - The average year of birth in generation |
|
407 | + * |
|
408 | + * @return array Statistics array |
|
409 | + */ |
|
410 | + public function getStatisticsByGeneration() { |
|
411 | + if(!$this->is_setup) return array(); |
|
412 | + if(!$this->statistics_tab) { |
|
413 | + $this->statistics_tab = array(); |
|
414 | + if($maxGeneration = $this->getLastGeneration()) { |
|
415 | + for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
|
416 | + $birthStats = $this->getStatsBirthYearInGeneration($gen); |
|
417 | + $this->statistics_tab[$gen] = array( |
|
418 | + 'sosaCount' => $this->getSosaCountAtGeneration($gen), |
|
419 | + 'sosaTotalCount' => $this->getSosaCountUpToGeneration($gen), |
|
420 | + 'diffSosaTotalCount' => $this->getDifferentSosaCountUpToGeneration($gen), |
|
421 | + 'firstBirth' => $birthStats['first'], |
|
422 | + 'firstEstimatedBirth' => $birthStats['first_est'], |
|
423 | + 'lastBirth' => $birthStats['last'], |
|
424 | + 'lastEstimatedBirth' => $birthStats['last_est'], |
|
425 | + 'avgBirth' => $birthStats['avg'] |
|
426 | + ); |
|
427 | + } |
|
428 | + } |
|
429 | + } |
|
430 | + return $this->statistics_tab; |
|
431 | + } |
|
432 | 432 | |
433 | 433 | /** |
434 | 434 | * How many individuals exist in the tree. |
@@ -436,332 +436,332 @@ discard block |
||
436 | 436 | * @return int |
437 | 437 | */ |
438 | 438 | public function getTotalIndividuals() { |
439 | - if(!$this->is_setup) return 0; |
|
440 | - return Database::prepare( |
|
441 | - 'SELECT COUNT(*) FROM `##individuals`' . |
|
442 | - ' WHERE i_file = :tree_id') |
|
443 | - ->execute(array('tree_id' => $this->tree->getTreeId())) |
|
444 | - ->fetchOne() ?: 0; |
|
439 | + if(!$this->is_setup) return 0; |
|
440 | + return Database::prepare( |
|
441 | + 'SELECT COUNT(*) FROM `##individuals`' . |
|
442 | + ' WHERE i_file = :tree_id') |
|
443 | + ->execute(array('tree_id' => $this->tree->getTreeId())) |
|
444 | + ->fetchOne() ?: 0; |
|
445 | 445 | } |
446 | 446 | |
447 | - /** |
|
448 | - * Get the total Sosa count for all generations |
|
449 | - * |
|
450 | - * @return number Number of Sosas |
|
451 | - */ |
|
452 | - public function getSosaCount(){ |
|
453 | - if(!$this->is_setup) return 0; |
|
454 | - return Database::prepare( |
|
455 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
456 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
457 | - ->execute(array( |
|
458 | - 'tree_id' => $this->tree->getTreeId(), |
|
459 | - 'user_id' => $this->user->getUserId() |
|
460 | - ))->fetchOne() ?: 0; |
|
461 | - } |
|
462 | - |
|
463 | - /** |
|
464 | - * Get the number of Sosa in a specific generation. |
|
465 | - * |
|
466 | - * @param number $gen Generation |
|
467 | - * @return number Number of Sosas in generation |
|
468 | - */ |
|
469 | - public function getSosaCountAtGeneration($gen){ |
|
470 | - if(!$this->is_setup) return 0; |
|
471 | - return Database::prepare( |
|
472 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
473 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
474 | - ' AND majs_gen= :gen') |
|
475 | - ->execute(array( |
|
476 | - 'tree_id' => $this->tree->getTreeId(), |
|
477 | - 'user_id' => $this->user->getUserId(), |
|
478 | - 'gen' => $gen |
|
479 | - ))->fetchOne() ?: 0; |
|
480 | - } |
|
481 | - |
|
482 | - /** |
|
483 | - * Get the total number of Sosa up to a specific generation. |
|
484 | - * |
|
485 | - * @param number $gen Generation |
|
486 | - * @return number Total number of Sosas up to generation |
|
487 | - */ |
|
488 | - public function getSosaCountUpToGeneration($gen){ |
|
489 | - if(!$this->is_setup) return 0; |
|
490 | - return Database::prepare( |
|
491 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
492 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
493 | - ' AND majs_gen <= :gen') |
|
494 | - ->execute(array( |
|
495 | - 'tree_id' => $this->tree->getTreeId(), |
|
496 | - 'user_id' => $this->user->getUserId(), |
|
497 | - 'gen' => $gen |
|
498 | - ))->fetchOne() ?: 0; |
|
499 | - } |
|
500 | - |
|
501 | - /** |
|
502 | - * Get the total number of distinct Sosa individual for all generations. |
|
503 | - * |
|
504 | - * @return number Total number of distinct individual |
|
505 | - */ |
|
506 | - public function getDifferentSosaCount(){ |
|
507 | - if(!$this->is_setup) return 0; |
|
508 | - return Database::prepare( |
|
509 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
510 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
511 | - ->execute(array( |
|
512 | - 'tree_id' => $this->tree->getTreeId(), |
|
513 | - 'user_id' => $this->user->getUserId() |
|
514 | - ))->fetchOne() ?: 0; |
|
515 | - } |
|
516 | - |
|
517 | - /** |
|
518 | - * Get the number of distinct Sosa individual up to a specific generation. |
|
519 | - * |
|
520 | - * @param number $gen Generation |
|
521 | - * @return number Number of distinct Sosa individuals up to generation |
|
522 | - */ |
|
523 | - public function getDifferentSosaCountUpToGeneration($gen){ |
|
524 | - if(!$this->is_setup) return 0; |
|
525 | - return Database::prepare( |
|
526 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
527 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
528 | - ' AND majs_gen <= :gen') |
|
529 | - ->execute(array( |
|
530 | - 'tree_id' => $this->tree->getTreeId(), |
|
531 | - 'user_id' => $this->user->getUserId(), |
|
532 | - 'gen' => $gen |
|
533 | - ))->fetchOne() ?: 0; |
|
534 | - } |
|
535 | - |
|
536 | - /** |
|
537 | - * Get an array of birth statistics for a specific generation |
|
538 | - * Statistics are : |
|
539 | - * - first : First birth year in generation |
|
540 | - * - first_est: First estimated birth year in generation |
|
541 | - * - last : Last birth year in generation |
|
542 | - * - last_est : Last estimated birth year in generation |
|
543 | - * - avg : Average birth year (based on non-estimated birth date) |
|
544 | - * |
|
545 | - * @param number $gen Generation |
|
546 | - * @return array Birth statistics array |
|
547 | - */ |
|
548 | - public function getStatsBirthYearInGeneration($gen){ |
|
549 | - if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
550 | - return Database::prepare( |
|
551 | - 'SELECT'. |
|
552 | - ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'. |
|
553 | - ' AVG(majs_birth_year) AS avg,'. |
|
554 | - ' MAX(majs_birth_year) AS last, MAX(majs_birth_year_est) AS last_est'. |
|
555 | - ' FROM `##maj_sosa`'. |
|
556 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
557 | - ' AND majs_gen=:gen') |
|
558 | - ->execute(array( |
|
559 | - 'tree_id' => $this->tree->getTreeId(), |
|
560 | - 'user_id' => $this->user->getUserId(), |
|
561 | - 'gen' => $gen)) |
|
562 | - ->fetchOneRow(\PDO::FETCH_ASSOC) ?: array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
563 | - } |
|
564 | - |
|
565 | - /** |
|
566 | - * Get the mean generation time, based on a linear regression of birth years and generations |
|
567 | - * |
|
568 | - * @return number|NULL Mean generation time |
|
569 | - */ |
|
570 | - public function getMeanGenerationTime(){ |
|
571 | - if(!$this->is_setup) return; |
|
572 | - if(!$this->statistics_tab){ |
|
573 | - $this->getStatisticsByGeneration(); |
|
574 | - } |
|
575 | - //Linear regression on x=generation and y=birthdate |
|
576 | - $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0; |
|
577 | - foreach($this->statistics_tab as $gen=>$stats){ |
|
578 | - if(!is_null($stats['avgBirth'])) { |
|
579 | - $n++; |
|
580 | - $sum_xy+=$gen*$stats['avgBirth']; |
|
581 | - $sum_x+=$gen; |
|
582 | - $sum_y+=$stats['avgBirth']; |
|
583 | - $sum_x2+=$gen*$gen; |
|
584 | - } |
|
585 | - } |
|
586 | - $denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
587 | - if($denom!=0){ |
|
588 | - return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
589 | - } |
|
590 | - return null; |
|
591 | - } |
|
592 | - |
|
593 | - /** |
|
594 | - * Return an array of the mean generation depth and standard deviation for all Sosa ancestors at a given generation. |
|
595 | - * Sosa 1 is of generation 1. |
|
596 | - * |
|
597 | - * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes, |
|
598 | - * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140 |
|
599 | - * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0 |
|
600 | - * |
|
601 | - * Format: |
|
602 | - * - key : sosa number of the ancestor |
|
603 | - * - values: array |
|
604 | - * - root_ancestor_id : ID of the ancestor |
|
605 | - * - mean_gen_depth : Mean generation depth |
|
606 | - * - stddev_gen_depth : Standard deviation of generation depth |
|
607 | - * |
|
608 | - * @param number $gen Sosa generation |
|
609 | - * @return array |
|
610 | - */ |
|
611 | - public function getGenerationDepthStatsAtGen($gen) { |
|
612 | - if(!$this->is_setup) return array(); |
|
613 | - $gen_depth_stats_raw = Database::prepare( |
|
614 | - 'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'. |
|
615 | - ' sosa_list.majs_i_id as root_ancestor_id,'. |
|
616 | - ' 1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth,'. |
|
617 | - ' SQRT('. |
|
618 | - ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))'. |
|
619 | - ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)'. |
|
620 | - ' ) AS stddev_gen_depth'. |
|
621 | - ' FROM('. |
|
622 | - ' SELECT'. |
|
623 | - ' sosa.majs_gedcom_id,'. |
|
624 | - ' sosa.majs_user_id,'. |
|
625 | - ' sosa.majs_gen - :gen AS majs_gen_norm,'. |
|
626 | - ' FLOOR(((sosa.majs_sosa / POW(2, sosa.majs_gen -1 )) - 1) * POWER(2, :gen - 1)) + POWER(2, :gen - 1) AS root_ancestor,'. |
|
627 | - ' SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count,'. |
|
628 | - ' SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count'. |
|
629 | - ' FROM `##maj_sosa` AS sosa'. |
|
630 | - ' LEFT JOIN `##maj_sosa` AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. |
|
631 | - ' AND sosa_fat.majs_gedcom_id = sosa.majs_gedcom_id'. |
|
632 | - ' AND sosa_fat.majs_user_id = sosa.majs_user_id'. |
|
633 | - ' LEFT JOIN `##maj_sosa` AS sosa_mot ON sosa_mot.majs_sosa = 2 * sosa.majs_sosa + 1'. |
|
634 | - ' AND sosa_mot.majs_gedcom_id = sosa.majs_gedcom_id'. |
|
635 | - ' AND sosa_mot.majs_user_id = sosa.majs_user_id'. |
|
636 | - ' WHERE sosa.majs_gedcom_id = :tree_id'. |
|
637 | - ' AND sosa.majs_user_id = :user_id'. |
|
638 | - ' AND sosa.majs_gen >= :gen'. |
|
639 | - ' AND (sosa_fat.majs_i_id IS NULL OR sosa_mot.majs_i_id IS NULL)'. |
|
640 | - ' GROUP BY sosa.majs_gen, root_ancestor'. |
|
641 | - ' ) AS stats_by_gen'. |
|
642 | - ' INNER JOIN `##maj_sosa` sosa_list ON sosa_list.majs_gedcom_id = stats_by_gen.majs_gedcom_id'. |
|
643 | - ' AND sosa_list.majs_user_id = stats_by_gen.majs_user_id'. |
|
644 | - ' AND sosa_list.majs_sosa = stats_by_gen.root_ancestor'. |
|
645 | - ' GROUP BY stats_by_gen.root_ancestor, sosa_list.majs_i_id'. |
|
646 | - ' ORDER BY stats_by_gen.root_ancestor') |
|
647 | - ->execute(array( |
|
648 | - 'tree_id' => $this->tree->getTreeId(), |
|
649 | - 'user_id' => $this->user->getUserId(), |
|
650 | - 'gen' => $gen |
|
651 | - ))->fetchAll() ?: array(); |
|
447 | + /** |
|
448 | + * Get the total Sosa count for all generations |
|
449 | + * |
|
450 | + * @return number Number of Sosas |
|
451 | + */ |
|
452 | + public function getSosaCount(){ |
|
453 | + if(!$this->is_setup) return 0; |
|
454 | + return Database::prepare( |
|
455 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
456 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
457 | + ->execute(array( |
|
458 | + 'tree_id' => $this->tree->getTreeId(), |
|
459 | + 'user_id' => $this->user->getUserId() |
|
460 | + ))->fetchOne() ?: 0; |
|
461 | + } |
|
462 | + |
|
463 | + /** |
|
464 | + * Get the number of Sosa in a specific generation. |
|
465 | + * |
|
466 | + * @param number $gen Generation |
|
467 | + * @return number Number of Sosas in generation |
|
468 | + */ |
|
469 | + public function getSosaCountAtGeneration($gen){ |
|
470 | + if(!$this->is_setup) return 0; |
|
471 | + return Database::prepare( |
|
472 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
473 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
474 | + ' AND majs_gen= :gen') |
|
475 | + ->execute(array( |
|
476 | + 'tree_id' => $this->tree->getTreeId(), |
|
477 | + 'user_id' => $this->user->getUserId(), |
|
478 | + 'gen' => $gen |
|
479 | + ))->fetchOne() ?: 0; |
|
480 | + } |
|
481 | + |
|
482 | + /** |
|
483 | + * Get the total number of Sosa up to a specific generation. |
|
484 | + * |
|
485 | + * @param number $gen Generation |
|
486 | + * @return number Total number of Sosas up to generation |
|
487 | + */ |
|
488 | + public function getSosaCountUpToGeneration($gen){ |
|
489 | + if(!$this->is_setup) return 0; |
|
490 | + return Database::prepare( |
|
491 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
492 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
493 | + ' AND majs_gen <= :gen') |
|
494 | + ->execute(array( |
|
495 | + 'tree_id' => $this->tree->getTreeId(), |
|
496 | + 'user_id' => $this->user->getUserId(), |
|
497 | + 'gen' => $gen |
|
498 | + ))->fetchOne() ?: 0; |
|
499 | + } |
|
500 | + |
|
501 | + /** |
|
502 | + * Get the total number of distinct Sosa individual for all generations. |
|
503 | + * |
|
504 | + * @return number Total number of distinct individual |
|
505 | + */ |
|
506 | + public function getDifferentSosaCount(){ |
|
507 | + if(!$this->is_setup) return 0; |
|
508 | + return Database::prepare( |
|
509 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
510 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
511 | + ->execute(array( |
|
512 | + 'tree_id' => $this->tree->getTreeId(), |
|
513 | + 'user_id' => $this->user->getUserId() |
|
514 | + ))->fetchOne() ?: 0; |
|
515 | + } |
|
516 | + |
|
517 | + /** |
|
518 | + * Get the number of distinct Sosa individual up to a specific generation. |
|
519 | + * |
|
520 | + * @param number $gen Generation |
|
521 | + * @return number Number of distinct Sosa individuals up to generation |
|
522 | + */ |
|
523 | + public function getDifferentSosaCountUpToGeneration($gen){ |
|
524 | + if(!$this->is_setup) return 0; |
|
525 | + return Database::prepare( |
|
526 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
527 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
528 | + ' AND majs_gen <= :gen') |
|
529 | + ->execute(array( |
|
530 | + 'tree_id' => $this->tree->getTreeId(), |
|
531 | + 'user_id' => $this->user->getUserId(), |
|
532 | + 'gen' => $gen |
|
533 | + ))->fetchOne() ?: 0; |
|
534 | + } |
|
535 | + |
|
536 | + /** |
|
537 | + * Get an array of birth statistics for a specific generation |
|
538 | + * Statistics are : |
|
539 | + * - first : First birth year in generation |
|
540 | + * - first_est: First estimated birth year in generation |
|
541 | + * - last : Last birth year in generation |
|
542 | + * - last_est : Last estimated birth year in generation |
|
543 | + * - avg : Average birth year (based on non-estimated birth date) |
|
544 | + * |
|
545 | + * @param number $gen Generation |
|
546 | + * @return array Birth statistics array |
|
547 | + */ |
|
548 | + public function getStatsBirthYearInGeneration($gen){ |
|
549 | + if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
550 | + return Database::prepare( |
|
551 | + 'SELECT'. |
|
552 | + ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'. |
|
553 | + ' AVG(majs_birth_year) AS avg,'. |
|
554 | + ' MAX(majs_birth_year) AS last, MAX(majs_birth_year_est) AS last_est'. |
|
555 | + ' FROM `##maj_sosa`'. |
|
556 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
557 | + ' AND majs_gen=:gen') |
|
558 | + ->execute(array( |
|
559 | + 'tree_id' => $this->tree->getTreeId(), |
|
560 | + 'user_id' => $this->user->getUserId(), |
|
561 | + 'gen' => $gen)) |
|
562 | + ->fetchOneRow(\PDO::FETCH_ASSOC) ?: array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
563 | + } |
|
564 | + |
|
565 | + /** |
|
566 | + * Get the mean generation time, based on a linear regression of birth years and generations |
|
567 | + * |
|
568 | + * @return number|NULL Mean generation time |
|
569 | + */ |
|
570 | + public function getMeanGenerationTime(){ |
|
571 | + if(!$this->is_setup) return; |
|
572 | + if(!$this->statistics_tab){ |
|
573 | + $this->getStatisticsByGeneration(); |
|
574 | + } |
|
575 | + //Linear regression on x=generation and y=birthdate |
|
576 | + $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0; |
|
577 | + foreach($this->statistics_tab as $gen=>$stats){ |
|
578 | + if(!is_null($stats['avgBirth'])) { |
|
579 | + $n++; |
|
580 | + $sum_xy+=$gen*$stats['avgBirth']; |
|
581 | + $sum_x+=$gen; |
|
582 | + $sum_y+=$stats['avgBirth']; |
|
583 | + $sum_x2+=$gen*$gen; |
|
584 | + } |
|
585 | + } |
|
586 | + $denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
587 | + if($denom!=0){ |
|
588 | + return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
589 | + } |
|
590 | + return null; |
|
591 | + } |
|
592 | + |
|
593 | + /** |
|
594 | + * Return an array of the mean generation depth and standard deviation for all Sosa ancestors at a given generation. |
|
595 | + * Sosa 1 is of generation 1. |
|
596 | + * |
|
597 | + * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes, |
|
598 | + * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140 |
|
599 | + * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0 |
|
600 | + * |
|
601 | + * Format: |
|
602 | + * - key : sosa number of the ancestor |
|
603 | + * - values: array |
|
604 | + * - root_ancestor_id : ID of the ancestor |
|
605 | + * - mean_gen_depth : Mean generation depth |
|
606 | + * - stddev_gen_depth : Standard deviation of generation depth |
|
607 | + * |
|
608 | + * @param number $gen Sosa generation |
|
609 | + * @return array |
|
610 | + */ |
|
611 | + public function getGenerationDepthStatsAtGen($gen) { |
|
612 | + if(!$this->is_setup) return array(); |
|
613 | + $gen_depth_stats_raw = Database::prepare( |
|
614 | + 'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'. |
|
615 | + ' sosa_list.majs_i_id as root_ancestor_id,'. |
|
616 | + ' 1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth,'. |
|
617 | + ' SQRT('. |
|
618 | + ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))'. |
|
619 | + ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)'. |
|
620 | + ' ) AS stddev_gen_depth'. |
|
621 | + ' FROM('. |
|
622 | + ' SELECT'. |
|
623 | + ' sosa.majs_gedcom_id,'. |
|
624 | + ' sosa.majs_user_id,'. |
|
625 | + ' sosa.majs_gen - :gen AS majs_gen_norm,'. |
|
626 | + ' FLOOR(((sosa.majs_sosa / POW(2, sosa.majs_gen -1 )) - 1) * POWER(2, :gen - 1)) + POWER(2, :gen - 1) AS root_ancestor,'. |
|
627 | + ' SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count,'. |
|
628 | + ' SUM(case when sosa_fat.majs_i_id IS NULL AND sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count'. |
|
629 | + ' FROM `##maj_sosa` AS sosa'. |
|
630 | + ' LEFT JOIN `##maj_sosa` AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. |
|
631 | + ' AND sosa_fat.majs_gedcom_id = sosa.majs_gedcom_id'. |
|
632 | + ' AND sosa_fat.majs_user_id = sosa.majs_user_id'. |
|
633 | + ' LEFT JOIN `##maj_sosa` AS sosa_mot ON sosa_mot.majs_sosa = 2 * sosa.majs_sosa + 1'. |
|
634 | + ' AND sosa_mot.majs_gedcom_id = sosa.majs_gedcom_id'. |
|
635 | + ' AND sosa_mot.majs_user_id = sosa.majs_user_id'. |
|
636 | + ' WHERE sosa.majs_gedcom_id = :tree_id'. |
|
637 | + ' AND sosa.majs_user_id = :user_id'. |
|
638 | + ' AND sosa.majs_gen >= :gen'. |
|
639 | + ' AND (sosa_fat.majs_i_id IS NULL OR sosa_mot.majs_i_id IS NULL)'. |
|
640 | + ' GROUP BY sosa.majs_gen, root_ancestor'. |
|
641 | + ' ) AS stats_by_gen'. |
|
642 | + ' INNER JOIN `##maj_sosa` sosa_list ON sosa_list.majs_gedcom_id = stats_by_gen.majs_gedcom_id'. |
|
643 | + ' AND sosa_list.majs_user_id = stats_by_gen.majs_user_id'. |
|
644 | + ' AND sosa_list.majs_sosa = stats_by_gen.root_ancestor'. |
|
645 | + ' GROUP BY stats_by_gen.root_ancestor, sosa_list.majs_i_id'. |
|
646 | + ' ORDER BY stats_by_gen.root_ancestor') |
|
647 | + ->execute(array( |
|
648 | + 'tree_id' => $this->tree->getTreeId(), |
|
649 | + 'user_id' => $this->user->getUserId(), |
|
650 | + 'gen' => $gen |
|
651 | + ))->fetchAll() ?: array(); |
|
652 | 652 | |
653 | - $gen_depth_stats = array(); |
|
654 | - foreach ($gen_depth_stats_raw as $gen_depth_stat) { |
|
655 | - $gen_depth_stats[$gen_depth_stat->root_ancestor_sosa] = array( |
|
656 | - 'root_ancestor_id' => $gen_depth_stat->root_ancestor_id, |
|
657 | - 'mean_gen_depth' => $gen_depth_stat->mean_gen_depth, |
|
658 | - 'stddev_gen_depth' => $gen_depth_stat->stddev_gen_depth |
|
659 | - ); |
|
660 | - } |
|
661 | - return $gen_depth_stats; |
|
662 | - } |
|
663 | - |
|
664 | - /** |
|
665 | - * Return a computed array of statistics about the dispersion of ancestors across the ancestors |
|
666 | - * at a specified generation. |
|
667 | - * This statistics cannot be used for generations above 11, as it would cause a out of range in MySQL |
|
668 | - * |
|
669 | - * Format: |
|
670 | - * - key : a base-2 representation of the ancestor at generation G for which exclusive ancestors have been found, |
|
671 | - * -1 is used for shared ancestors |
|
672 | - * For instance base2(0100) = base10(4) represent the maternal grand father |
|
673 | - * - values: number of ancestors exclusively in the ancestors of the ancestor in key |
|
674 | - * |
|
675 | - * For instance a result at generation 3 could be : |
|
676 | - * array ( -1 => 12 -> 12 ancestors are shared by the grand-parents |
|
677 | - * base10(1) => 32 -> 32 ancestors are exclusive to the paternal grand-father |
|
678 | - * base10(2) => 25 -> 25 ancestors are exclusive to the paternal grand-mother |
|
679 | - * base10(4) => 12 -> 12 ancestors are exclusive to the maternal grand-father |
|
680 | - * base10(8) => 30 -> 30 ancestors are exclusive to the maternal grand-mother |
|
681 | - * ) |
|
682 | - * |
|
683 | - * @param int $gen Reference generation |
|
684 | - * @return array |
|
685 | - */ |
|
686 | - public function getAncestorDispersionForGen($gen) { |
|
687 | - if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
688 | - return Database::prepare( |
|
689 | - 'SELECT branches, count(i_id)'. |
|
690 | - ' FROM ('. |
|
691 | - ' SELECT i_id,'. |
|
692 | - ' CASE'. |
|
693 | - ' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
|
694 | - ' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
695 | - ' END branches'. |
|
696 | - ' FROM ('. |
|
697 | - ' SELECT DISTINCT majs_i_id i_id,'. |
|
698 | - ' POW(2, FLOOR(majs_sosa / POW(2, (majs_gen - :gen))) - POW(2, :gen -1)) branch'. |
|
699 | - ' FROM `##maj_sosa`'. |
|
700 | - ' WHERE majs_gedcom_id = :tree_id AND majs_user_id = :user_id'. |
|
701 | - ' AND majs_gen >= :gen'. |
|
702 | - ' ) indistat'. |
|
703 | - ' GROUP BY i_id'. |
|
704 | - ') grouped'. |
|
705 | - ' GROUP BY branches') |
|
706 | - ->execute(array( |
|
707 | - 'tree_id' => $this->tree->getTreeId(), |
|
708 | - 'user_id' => $this->user->getUserId(), |
|
709 | - 'gen' => $gen |
|
710 | - ))->fetchAssoc() ?: array(); |
|
711 | - } |
|
712 | - |
|
713 | - /** |
|
714 | - * Return an array of the most duplicated root Sosa ancestors. |
|
715 | - * The number of ancestors to return is limited by the parameter $limit. |
|
716 | - * If several individuals are tied when reaching the limit, none of them are returned, |
|
717 | - * which means that there can be less individuals returned than requested. |
|
718 | - * |
|
719 | - * Format: |
|
720 | - * - key : root Sosa individual |
|
721 | - * - value: number of duplications of the ancestor (e.g. 3 if it appears 3 times) |
|
722 | - * |
|
723 | - * @param number $limit Maximum number of individuals to return |
|
724 | - * @return array |
|
725 | - */ |
|
726 | - public function getTopMultiSosaAncestorsNoTies($limit) { |
|
727 | - if(!$this->is_setup) return array(); |
|
728 | - return Database::prepare( |
|
729 | - 'SELECT sosa_i_id, sosa_count FROM ('. |
|
730 | - ' SELECT'. |
|
731 | - ' top_sosa.sosa_i_id, top_sosa.sosa_count, top_sosa.sosa_min,'. |
|
732 | - ' @keep := IF(@prev_count = 0 OR sosa_count = @prev_count, @keep, 1) AS keep,'. |
|
733 | - ' @prev_count := top_sosa.sosa_count AS prev_count'. |
|
734 | - ' FROM ('. |
|
735 | - ' SELECT'. |
|
736 | - ' sosa.majs_i_id sosa_i_id,'. |
|
737 | - ' COUNT(sosa.majs_sosa) sosa_count,'. |
|
738 | - ' MIN(sosa.majs_sosa) sosa_min'. |
|
739 | - ' FROM ##maj_sosa AS sosa'. |
|
740 | - ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
741 | - ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
742 | - ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
743 | - ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
744 | - ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
745 | - ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
746 | - ' WHERE sosa.majs_gedcom_id = :tree_id'. |
|
747 | - ' AND sosa.majs_user_id = :user_id'. |
|
748 | - ' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
749 | - ' AND sosa_mot.majs_sosa IS NULL'. |
|
750 | - ' GROUP BY sosa.majs_i_id'. |
|
751 | - ' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
752 | - ' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
|
753 | - ' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
754 | - ' ) AS top_sosa,'. |
|
755 | - ' (SELECT @prev_count := 0, @keep := 0) x'. |
|
756 | - ' ORDER BY top_sosa.sosa_count ASC'. |
|
757 | - ' ) top_sosa_list'. |
|
758 | - ' WHERE keep = 1'. |
|
759 | - ' ORDER BY sosa_count DESC, sosa_min ASC' |
|
760 | - )->execute(array( |
|
761 | - 'tree_id' => $this->tree->getTreeId(), |
|
762 | - 'user_id' => $this->user->getUserId() |
|
763 | - ))->fetchAssoc() ?: array(); |
|
764 | - } |
|
653 | + $gen_depth_stats = array(); |
|
654 | + foreach ($gen_depth_stats_raw as $gen_depth_stat) { |
|
655 | + $gen_depth_stats[$gen_depth_stat->root_ancestor_sosa] = array( |
|
656 | + 'root_ancestor_id' => $gen_depth_stat->root_ancestor_id, |
|
657 | + 'mean_gen_depth' => $gen_depth_stat->mean_gen_depth, |
|
658 | + 'stddev_gen_depth' => $gen_depth_stat->stddev_gen_depth |
|
659 | + ); |
|
660 | + } |
|
661 | + return $gen_depth_stats; |
|
662 | + } |
|
663 | + |
|
664 | + /** |
|
665 | + * Return a computed array of statistics about the dispersion of ancestors across the ancestors |
|
666 | + * at a specified generation. |
|
667 | + * This statistics cannot be used for generations above 11, as it would cause a out of range in MySQL |
|
668 | + * |
|
669 | + * Format: |
|
670 | + * - key : a base-2 representation of the ancestor at generation G for which exclusive ancestors have been found, |
|
671 | + * -1 is used for shared ancestors |
|
672 | + * For instance base2(0100) = base10(4) represent the maternal grand father |
|
673 | + * - values: number of ancestors exclusively in the ancestors of the ancestor in key |
|
674 | + * |
|
675 | + * For instance a result at generation 3 could be : |
|
676 | + * array ( -1 => 12 -> 12 ancestors are shared by the grand-parents |
|
677 | + * base10(1) => 32 -> 32 ancestors are exclusive to the paternal grand-father |
|
678 | + * base10(2) => 25 -> 25 ancestors are exclusive to the paternal grand-mother |
|
679 | + * base10(4) => 12 -> 12 ancestors are exclusive to the maternal grand-father |
|
680 | + * base10(8) => 30 -> 30 ancestors are exclusive to the maternal grand-mother |
|
681 | + * ) |
|
682 | + * |
|
683 | + * @param int $gen Reference generation |
|
684 | + * @return array |
|
685 | + */ |
|
686 | + public function getAncestorDispersionForGen($gen) { |
|
687 | + if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
688 | + return Database::prepare( |
|
689 | + 'SELECT branches, count(i_id)'. |
|
690 | + ' FROM ('. |
|
691 | + ' SELECT i_id,'. |
|
692 | + ' CASE'. |
|
693 | + ' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
|
694 | + ' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
695 | + ' END branches'. |
|
696 | + ' FROM ('. |
|
697 | + ' SELECT DISTINCT majs_i_id i_id,'. |
|
698 | + ' POW(2, FLOOR(majs_sosa / POW(2, (majs_gen - :gen))) - POW(2, :gen -1)) branch'. |
|
699 | + ' FROM `##maj_sosa`'. |
|
700 | + ' WHERE majs_gedcom_id = :tree_id AND majs_user_id = :user_id'. |
|
701 | + ' AND majs_gen >= :gen'. |
|
702 | + ' ) indistat'. |
|
703 | + ' GROUP BY i_id'. |
|
704 | + ') grouped'. |
|
705 | + ' GROUP BY branches') |
|
706 | + ->execute(array( |
|
707 | + 'tree_id' => $this->tree->getTreeId(), |
|
708 | + 'user_id' => $this->user->getUserId(), |
|
709 | + 'gen' => $gen |
|
710 | + ))->fetchAssoc() ?: array(); |
|
711 | + } |
|
712 | + |
|
713 | + /** |
|
714 | + * Return an array of the most duplicated root Sosa ancestors. |
|
715 | + * The number of ancestors to return is limited by the parameter $limit. |
|
716 | + * If several individuals are tied when reaching the limit, none of them are returned, |
|
717 | + * which means that there can be less individuals returned than requested. |
|
718 | + * |
|
719 | + * Format: |
|
720 | + * - key : root Sosa individual |
|
721 | + * - value: number of duplications of the ancestor (e.g. 3 if it appears 3 times) |
|
722 | + * |
|
723 | + * @param number $limit Maximum number of individuals to return |
|
724 | + * @return array |
|
725 | + */ |
|
726 | + public function getTopMultiSosaAncestorsNoTies($limit) { |
|
727 | + if(!$this->is_setup) return array(); |
|
728 | + return Database::prepare( |
|
729 | + 'SELECT sosa_i_id, sosa_count FROM ('. |
|
730 | + ' SELECT'. |
|
731 | + ' top_sosa.sosa_i_id, top_sosa.sosa_count, top_sosa.sosa_min,'. |
|
732 | + ' @keep := IF(@prev_count = 0 OR sosa_count = @prev_count, @keep, 1) AS keep,'. |
|
733 | + ' @prev_count := top_sosa.sosa_count AS prev_count'. |
|
734 | + ' FROM ('. |
|
735 | + ' SELECT'. |
|
736 | + ' sosa.majs_i_id sosa_i_id,'. |
|
737 | + ' COUNT(sosa.majs_sosa) sosa_count,'. |
|
738 | + ' MIN(sosa.majs_sosa) sosa_min'. |
|
739 | + ' FROM ##maj_sosa AS sosa'. |
|
740 | + ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
741 | + ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
742 | + ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
743 | + ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
744 | + ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
745 | + ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
746 | + ' WHERE sosa.majs_gedcom_id = :tree_id'. |
|
747 | + ' AND sosa.majs_user_id = :user_id'. |
|
748 | + ' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
749 | + ' AND sosa_mot.majs_sosa IS NULL'. |
|
750 | + ' GROUP BY sosa.majs_i_id'. |
|
751 | + ' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
752 | + ' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
|
753 | + ' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
754 | + ' ) AS top_sosa,'. |
|
755 | + ' (SELECT @prev_count := 0, @keep := 0) x'. |
|
756 | + ' ORDER BY top_sosa.sosa_count ASC'. |
|
757 | + ' ) top_sosa_list'. |
|
758 | + ' WHERE keep = 1'. |
|
759 | + ' ORDER BY sosa_count DESC, sosa_min ASC' |
|
760 | + )->execute(array( |
|
761 | + 'tree_id' => $this->tree->getTreeId(), |
|
762 | + 'user_id' => $this->user->getUserId() |
|
763 | + ))->fetchAssoc() ?: array(); |
|
764 | + } |
|
765 | 765 | |
766 | 766 | |
767 | 767 | } |
@@ -84,18 +84,18 @@ discard block |
||
84 | 84 | * @param User $user |
85 | 85 | */ |
86 | 86 | public function __construct(Tree $tree, User $user = null) { |
87 | - if(self::$default_user === null) |
|
87 | + if (self::$default_user === null) |
|
88 | 88 | self::$default_user = User::find(-1); |
89 | 89 | |
90 | 90 | $this->tree = $tree; |
91 | 91 | $this->user = $user; |
92 | 92 | $this->is_setup = true; |
93 | - if($this->user === null) $this->user = Auth::user(); |
|
94 | - if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
93 | + if ($this->user === null) $this->user = Auth::user(); |
|
94 | + if (strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
95 | 95 | |
96 | 96 | // Check if the user, or the default user, has a root already setup; |
97 | - if(empty($this->getRootIndiId())) { |
|
98 | - if($this->user == self::$default_user) { // If the default user is not setup |
|
97 | + if (empty($this->getRootIndiId())) { |
|
98 | + if ($this->user == self::$default_user) { // If the default user is not setup |
|
99 | 99 | $this->is_setup = false; |
100 | 100 | } |
101 | 101 | else { |
@@ -145,7 +145,7 @@ discard block |
||
145 | 145 | */ |
146 | 146 | public function getRootIndi() { |
147 | 147 | $root_indi_id = $this->getRootIndiId(); |
148 | - if(!empty($root_indi_id)) { |
|
148 | + if (!empty($root_indi_id)) { |
|
149 | 149 | return Individual::getInstance($root_indi_id, $this->tree); |
150 | 150 | } |
151 | 151 | return null; |
@@ -159,7 +159,7 @@ discard block |
||
159 | 159 | * Remove all Sosa entries related to the gedcom file and user |
160 | 160 | */ |
161 | 161 | public function deleteAll() { |
162 | - if(!$this->is_setup) return; |
|
162 | + if (!$this->is_setup) return; |
|
163 | 163 | Database::prepare( |
164 | 164 | 'DELETE FROM `##maj_sosa`'. |
165 | 165 | ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
@@ -175,12 +175,12 @@ discard block |
||
175 | 175 | * @param int $sosa |
176 | 176 | */ |
177 | 177 | public function deleteAncestors($sosa) { |
178 | - if(!$this->is_setup) return; |
|
178 | + if (!$this->is_setup) return; |
|
179 | 179 | $gen = Functions::getGeneration($sosa); |
180 | 180 | Database::prepare( |
181 | 181 | 'DELETE FROM `##maj_sosa`'. |
182 | - ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
|
183 | - ' AND majs_gen >= :gen' . |
|
182 | + ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id'. |
|
183 | + ' AND majs_gen >= :gen'. |
|
184 | 184 | ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
185 | 185 | )->execute(array( |
186 | 186 | 'tree_id' => $this->tree->getTreeId(), |
@@ -195,7 +195,7 @@ discard block |
||
195 | 195 | * @param array $sosa_records |
196 | 196 | */ |
197 | 197 | public function insertOrUpdate($sosa_records) { |
198 | - if(!$this->is_setup) return; |
|
198 | + if (!$this->is_setup) return; |
|
199 | 199 | |
200 | 200 | $treeid = $this->tree->getTreeId(); |
201 | 201 | $userid = $this->user->getUserId(); |
@@ -203,9 +203,9 @@ discard block |
||
203 | 203 | $values_table = array(); |
204 | 204 | |
205 | 205 | $i = 0; |
206 | - foreach ($sosa_records as $row) { |
|
206 | + foreach ($sosa_records as $row) { |
|
207 | 207 | $gen = Functions::getGeneration($row['sosa']); |
208 | - if($gen <= self::MAX_DB_GENERATIONS) { |
|
208 | + if ($gen <= self::MAX_DB_GENERATIONS) { |
|
209 | 209 | $questionmarks_table[] = |
210 | 210 | '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')'; |
211 | 211 | $values_table = array_merge( |
@@ -226,9 +226,9 @@ discard block |
||
226 | 226 | $i++; |
227 | 227 | } |
228 | 228 | |
229 | - $sql = 'REPLACE INTO `##maj_sosa`' . |
|
230 | - ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' . |
|
231 | - ' VALUES '. implode(',', $questionmarks_table); |
|
229 | + $sql = 'REPLACE INTO `##maj_sosa`'. |
|
230 | + ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)'. |
|
231 | + ' VALUES '.implode(',', $questionmarks_table); |
|
232 | 232 | Database::prepare($sql)->execute($values_table); |
233 | 233 | } |
234 | 234 | |
@@ -244,7 +244,7 @@ discard block |
||
244 | 244 | * @return array Array of sosa numbers |
245 | 245 | */ |
246 | 246 | public function getSosaNumbers(Individual $indi) { |
247 | - if(!$this->is_setup) return array(); |
|
247 | + if (!$this->is_setup) return array(); |
|
248 | 248 | return Database::prepare( |
249 | 249 | 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
250 | 250 | ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -261,7 +261,7 @@ discard block |
||
261 | 261 | * @return number Last generation if found, 1 otherwise |
262 | 262 | */ |
263 | 263 | public function getLastGeneration() { |
264 | - if(!$this->is_setup) return; |
|
264 | + if (!$this->is_setup) return; |
|
265 | 265 | return Database::prepare( |
266 | 266 | 'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
267 | 267 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -280,13 +280,13 @@ discard block |
||
280 | 280 | * |
281 | 281 | * @return array Associative array of Sosa ancestors, with their generation, comma separated |
282 | 282 | */ |
283 | - public function getAllSosaWithGenerations(){ |
|
284 | - if(!$this->is_setup) return array(); |
|
283 | + public function getAllSosaWithGenerations() { |
|
284 | + if (!$this->is_setup) return array(); |
|
285 | 285 | return Database::prepare( |
286 | - 'SELECT majs_i_id AS indi,' . |
|
287 | - ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
|
288 | - ' FROM `##maj_sosa`' . |
|
289 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
|
286 | + 'SELECT majs_i_id AS indi,'. |
|
287 | + ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations'. |
|
288 | + ' FROM `##maj_sosa`'. |
|
289 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
290 | 290 | ' GROUP BY majs_i_id' |
291 | 291 | )->execute(array( |
292 | 292 | 'tree_id' => $this->tree->getTreeId(), |
@@ -300,13 +300,13 @@ discard block |
||
300 | 300 | * @param number $gen Generation |
301 | 301 | * @return array Array of Sosa individuals |
302 | 302 | */ |
303 | - public function getSosaListAtGeneration($gen){ |
|
304 | - if(!$this->is_setup) return array(); |
|
305 | - if(!$this->sosa_list_by_gen) |
|
303 | + public function getSosaListAtGeneration($gen) { |
|
304 | + if (!$this->is_setup) return array(); |
|
305 | + if (!$this->sosa_list_by_gen) |
|
306 | 306 | $this->sosa_list_by_gen = array(); |
307 | 307 | |
308 | - if($gen){ |
|
309 | - if(!isset($this->sosa_list_by_gen[$gen])){ |
|
308 | + if ($gen) { |
|
309 | + if (!isset($this->sosa_list_by_gen[$gen])) { |
|
310 | 310 | $this->sosa_list_by_gen[$gen] = Database::prepare( |
311 | 311 | 'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
312 | 312 | ' FROM `##maj_sosa`'. |
@@ -331,13 +331,13 @@ discard block |
||
331 | 331 | * @param number $gen Generation |
332 | 332 | * @return array Array of Sosa families |
333 | 333 | */ |
334 | - public function getFamilySosaListAtGeneration($gen){ |
|
335 | - if(!$this->is_setup) return array(); |
|
336 | - if(!$this->sosa_fam_list_by_gen) |
|
334 | + public function getFamilySosaListAtGeneration($gen) { |
|
335 | + if (!$this->is_setup) return array(); |
|
336 | + if (!$this->sosa_fam_list_by_gen) |
|
337 | 337 | $this->sosa_fam_list_by_gen = array(); |
338 | 338 | |
339 | - if($gen){ |
|
340 | - if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
339 | + if ($gen) { |
|
340 | + if (!isset($this->sosa_fam_list_by_gen[$gen])) { |
|
341 | 341 | $this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
342 | 342 | 'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
343 | 343 | ' FROM `##families`'. |
@@ -367,9 +367,9 @@ discard block |
||
367 | 367 | * @param number $gen Generation |
368 | 368 | * @return array Array of Sosa individuals |
369 | 369 | */ |
370 | - public function getMissingSosaListAtGeneration($gen){ |
|
371 | - if(!$this->is_setup) return array(); |
|
372 | - if($gen){ |
|
370 | + public function getMissingSosaListAtGeneration($gen) { |
|
371 | + if (!$this->is_setup) return array(); |
|
372 | + if ($gen) { |
|
373 | 373 | return $this->sosa_list_by_gen[$gen] = Database::prepare( |
374 | 374 | 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
375 | 375 | ' FROM `##maj_sosa` schild'. |
@@ -408,10 +408,10 @@ discard block |
||
408 | 408 | * @return array Statistics array |
409 | 409 | */ |
410 | 410 | public function getStatisticsByGeneration() { |
411 | - if(!$this->is_setup) return array(); |
|
412 | - if(!$this->statistics_tab) { |
|
411 | + if (!$this->is_setup) return array(); |
|
412 | + if (!$this->statistics_tab) { |
|
413 | 413 | $this->statistics_tab = array(); |
414 | - if($maxGeneration = $this->getLastGeneration()) { |
|
414 | + if ($maxGeneration = $this->getLastGeneration()) { |
|
415 | 415 | for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
416 | 416 | $birthStats = $this->getStatsBirthYearInGeneration($gen); |
417 | 417 | $this->statistics_tab[$gen] = array( |
@@ -436,9 +436,9 @@ discard block |
||
436 | 436 | * @return int |
437 | 437 | */ |
438 | 438 | public function getTotalIndividuals() { |
439 | - if(!$this->is_setup) return 0; |
|
439 | + if (!$this->is_setup) return 0; |
|
440 | 440 | return Database::prepare( |
441 | - 'SELECT COUNT(*) FROM `##individuals`' . |
|
441 | + 'SELECT COUNT(*) FROM `##individuals`'. |
|
442 | 442 | ' WHERE i_file = :tree_id') |
443 | 443 | ->execute(array('tree_id' => $this->tree->getTreeId())) |
444 | 444 | ->fetchOne() ?: 0; |
@@ -449,10 +449,10 @@ discard block |
||
449 | 449 | * |
450 | 450 | * @return number Number of Sosas |
451 | 451 | */ |
452 | - public function getSosaCount(){ |
|
453 | - if(!$this->is_setup) return 0; |
|
452 | + public function getSosaCount() { |
|
453 | + if (!$this->is_setup) return 0; |
|
454 | 454 | return Database::prepare( |
455 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
455 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
456 | 456 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
457 | 457 | ->execute(array( |
458 | 458 | 'tree_id' => $this->tree->getTreeId(), |
@@ -466,10 +466,10 @@ discard block |
||
466 | 466 | * @param number $gen Generation |
467 | 467 | * @return number Number of Sosas in generation |
468 | 468 | */ |
469 | - public function getSosaCountAtGeneration($gen){ |
|
470 | - if(!$this->is_setup) return 0; |
|
469 | + public function getSosaCountAtGeneration($gen) { |
|
470 | + if (!$this->is_setup) return 0; |
|
471 | 471 | return Database::prepare( |
472 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
472 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
473 | 473 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
474 | 474 | ' AND majs_gen= :gen') |
475 | 475 | ->execute(array( |
@@ -485,10 +485,10 @@ discard block |
||
485 | 485 | * @param number $gen Generation |
486 | 486 | * @return number Total number of Sosas up to generation |
487 | 487 | */ |
488 | - public function getSosaCountUpToGeneration($gen){ |
|
489 | - if(!$this->is_setup) return 0; |
|
488 | + public function getSosaCountUpToGeneration($gen) { |
|
489 | + if (!$this->is_setup) return 0; |
|
490 | 490 | return Database::prepare( |
491 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
491 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
492 | 492 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
493 | 493 | ' AND majs_gen <= :gen') |
494 | 494 | ->execute(array( |
@@ -503,10 +503,10 @@ discard block |
||
503 | 503 | * |
504 | 504 | * @return number Total number of distinct individual |
505 | 505 | */ |
506 | - public function getDifferentSosaCount(){ |
|
507 | - if(!$this->is_setup) return 0; |
|
506 | + public function getDifferentSosaCount() { |
|
507 | + if (!$this->is_setup) return 0; |
|
508 | 508 | return Database::prepare( |
509 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
509 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
510 | 510 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
511 | 511 | ->execute(array( |
512 | 512 | 'tree_id' => $this->tree->getTreeId(), |
@@ -520,10 +520,10 @@ discard block |
||
520 | 520 | * @param number $gen Generation |
521 | 521 | * @return number Number of distinct Sosa individuals up to generation |
522 | 522 | */ |
523 | - public function getDifferentSosaCountUpToGeneration($gen){ |
|
524 | - if(!$this->is_setup) return 0; |
|
523 | + public function getDifferentSosaCountUpToGeneration($gen) { |
|
524 | + if (!$this->is_setup) return 0; |
|
525 | 525 | return Database::prepare( |
526 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
526 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
527 | 527 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
528 | 528 | ' AND majs_gen <= :gen') |
529 | 529 | ->execute(array( |
@@ -545,8 +545,8 @@ discard block |
||
545 | 545 | * @param number $gen Generation |
546 | 546 | * @return array Birth statistics array |
547 | 547 | */ |
548 | - public function getStatsBirthYearInGeneration($gen){ |
|
549 | - if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
548 | + public function getStatsBirthYearInGeneration($gen) { |
|
549 | + if (!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
550 | 550 | return Database::prepare( |
551 | 551 | 'SELECT'. |
552 | 552 | ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'. |
@@ -567,25 +567,25 @@ discard block |
||
567 | 567 | * |
568 | 568 | * @return number|NULL Mean generation time |
569 | 569 | */ |
570 | - public function getMeanGenerationTime(){ |
|
571 | - if(!$this->is_setup) return; |
|
572 | - if(!$this->statistics_tab){ |
|
570 | + public function getMeanGenerationTime() { |
|
571 | + if (!$this->is_setup) return; |
|
572 | + if (!$this->statistics_tab) { |
|
573 | 573 | $this->getStatisticsByGeneration(); |
574 | 574 | } |
575 | 575 | //Linear regression on x=generation and y=birthdate |
576 | - $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0; |
|
577 | - foreach($this->statistics_tab as $gen=>$stats){ |
|
578 | - if(!is_null($stats['avgBirth'])) { |
|
576 | + $sum_xy = $sum_x = $sum_y = $sum_x2 = $n = 0; |
|
577 | + foreach ($this->statistics_tab as $gen=>$stats) { |
|
578 | + if (!is_null($stats['avgBirth'])) { |
|
579 | 579 | $n++; |
580 | - $sum_xy+=$gen*$stats['avgBirth']; |
|
581 | - $sum_x+=$gen; |
|
582 | - $sum_y+=$stats['avgBirth']; |
|
583 | - $sum_x2+=$gen*$gen; |
|
580 | + $sum_xy += $gen * $stats['avgBirth']; |
|
581 | + $sum_x += $gen; |
|
582 | + $sum_y += $stats['avgBirth']; |
|
583 | + $sum_x2 += $gen * $gen; |
|
584 | 584 | } |
585 | 585 | } |
586 | - $denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
587 | - if($denom!=0){ |
|
588 | - return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
586 | + $denom = ($n * $sum_x2) - ($sum_x * $sum_x); |
|
587 | + if ($denom != 0) { |
|
588 | + return -(($n * $sum_xy) - ($sum_x * $sum_y)) / ($denom); |
|
589 | 589 | } |
590 | 590 | return null; |
591 | 591 | } |
@@ -609,7 +609,7 @@ discard block |
||
609 | 609 | * @return array |
610 | 610 | */ |
611 | 611 | public function getGenerationDepthStatsAtGen($gen) { |
612 | - if(!$this->is_setup) return array(); |
|
612 | + if (!$this->is_setup) return array(); |
|
613 | 613 | $gen_depth_stats_raw = Database::prepare( |
614 | 614 | 'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'. |
615 | 615 | ' sosa_list.majs_i_id as root_ancestor_id,'. |
@@ -684,14 +684,14 @@ discard block |
||
684 | 684 | * @return array |
685 | 685 | */ |
686 | 686 | public function getAncestorDispersionForGen($gen) { |
687 | - if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
687 | + if (!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
688 | 688 | return Database::prepare( |
689 | 689 | 'SELECT branches, count(i_id)'. |
690 | 690 | ' FROM ('. |
691 | 691 | ' SELECT i_id,'. |
692 | 692 | ' CASE'. |
693 | 693 | ' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
694 | - ' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
694 | + ' ELSE -1'.// We put all ancestors shared between some branches in the same bucket |
|
695 | 695 | ' END branches'. |
696 | 696 | ' FROM ('. |
697 | 697 | ' SELECT DISTINCT majs_i_id i_id,'. |
@@ -724,7 +724,7 @@ discard block |
||
724 | 724 | * @return array |
725 | 725 | */ |
726 | 726 | public function getTopMultiSosaAncestorsNoTies($limit) { |
727 | - if(!$this->is_setup) return array(); |
|
727 | + if (!$this->is_setup) return array(); |
|
728 | 728 | return Database::prepare( |
729 | 729 | 'SELECT sosa_i_id, sosa_count FROM ('. |
730 | 730 | ' SELECT'. |
@@ -737,20 +737,20 @@ discard block |
||
737 | 737 | ' COUNT(sosa.majs_sosa) sosa_count,'. |
738 | 738 | ' MIN(sosa.majs_sosa) sosa_min'. |
739 | 739 | ' FROM ##maj_sosa AS sosa'. |
740 | - ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
740 | + ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.// Link to sosa's father |
|
741 | 741 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
742 | 742 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
743 | - ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
743 | + ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.// Link to sosa's mother |
|
744 | 744 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
745 | 745 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
746 | 746 | ' WHERE sosa.majs_gedcom_id = :tree_id'. |
747 | 747 | ' AND sosa.majs_user_id = :user_id'. |
748 | - ' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
748 | + ' AND sosa_fat.majs_sosa IS NULL'.// We keep only root individuals, i.e. those with no father or mother |
|
749 | 749 | ' AND sosa_mot.majs_sosa IS NULL'. |
750 | 750 | ' GROUP BY sosa.majs_i_id'. |
751 | - ' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
751 | + ' HAVING COUNT(sosa.majs_sosa) > 1'.// Limit to the duplicate sosas. |
|
752 | 752 | ' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
753 | - ' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
753 | + ' LIMIT '.($limit + 1).// We want to select one more than required |
|
754 | 754 | ' ) AS top_sosa,'. |
755 | 755 | ' (SELECT @prev_count := 0, @keep := 0) x'. |
756 | 756 | ' ORDER BY top_sosa.sosa_count ASC'. |