@@ -63,7 +63,7 @@ discard block |
||
63 | 63 | $view_bag->set('title', $controller->getPageTitle()); |
64 | 64 | $view_bag->set('is_setup', false); |
65 | 65 | |
66 | - if($this->sosa_provider->isSetup()) { |
|
66 | + if ($this->sosa_provider->isSetup()) { |
|
67 | 67 | $view_bag->set('is_setup', true); |
68 | 68 | |
69 | 69 | $view_bag->set('root_indi', $this->sosa_provider->getRootIndi()); |
@@ -84,21 +84,21 @@ discard block |
||
84 | 84 | $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen='); |
85 | 85 | $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen='); |
86 | 86 | |
87 | - $gen_theoretical=1; |
|
88 | - $total_theoretical=0; |
|
89 | - $prev_diff=0; |
|
90 | - $prev_known=0.5; |
|
87 | + $gen_theoretical = 1; |
|
88 | + $total_theoretical = 0; |
|
89 | + $prev_diff = 0; |
|
90 | + $prev_known = 0.5; |
|
91 | 91 | $generation_stats = array(); |
92 | 92 | |
93 | - foreach($stats_gen as $gen => $tab){ |
|
94 | - $genY1= I18N::translate('-'); |
|
95 | - $genY2= I18N::translate('-'); |
|
96 | - if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth']; |
|
97 | - if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth']; |
|
93 | + foreach ($stats_gen as $gen => $tab) { |
|
94 | + $genY1 = I18N::translate('-'); |
|
95 | + $genY2 = I18N::translate('-'); |
|
96 | + if ($tab['firstBirth'] > 0) $genY1 = $tab['firstEstimatedBirth']; |
|
97 | + if ($tab['lastBirth'] > 0) $genY2 = $tab['lastEstimatedBirth']; |
|
98 | 98 | $total_theoretical += $gen_theoretical; |
99 | 99 | $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical); |
100 | - $missing=2*$prev_known - $tab['sosaCount']; |
|
101 | - $gen_diff=$tab['diffSosaTotalCount']-$prev_diff; |
|
100 | + $missing = 2 * $prev_known - $tab['sosaCount']; |
|
101 | + $gen_diff = $tab['diffSosaTotalCount'] - $prev_diff; |
|
102 | 102 | |
103 | 103 | $generation_stats[$gen] = array( |
104 | 104 | 'gen_min_birth' => $genY1, |
@@ -107,7 +107,7 @@ discard block |
||
107 | 107 | 'known' => $tab['sosaCount'], |
108 | 108 | 'perc_known' => $perc_sosa_count_theor, |
109 | 109 | 'missing' => $missing, |
110 | - 'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known), |
|
110 | + 'perc_missing' => 1 - Functions::safeDivision($tab['sosaCount'], 2 * $prev_known), |
|
111 | 111 | 'total_known' => $tab['sosaTotalCount'], |
112 | 112 | 'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical), |
113 | 113 | 'different' => $gen_diff, |
@@ -117,8 +117,8 @@ discard block |
||
117 | 117 | ); |
118 | 118 | |
119 | 119 | $gen_theoretical = $gen_theoretical * 2; |
120 | - $prev_known=$tab['sosaCount']; |
|
121 | - $prev_diff=$tab['diffSosaTotalCount']; |
|
120 | + $prev_known = $tab['sosaCount']; |
|
121 | + $prev_diff = $tab['diffSosaTotalCount']; |
|
122 | 122 | } |
123 | 123 | |
124 | 124 | $view_bag->set('generation_stats', $generation_stats); |
@@ -149,13 +149,12 @@ discard block |
||
149 | 149 | { |
150 | 150 | $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10); |
151 | 151 | $top10ancestors = array(); |
152 | - if($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | - foreach($top10multiancestors as $pid => $count) { |
|
152 | + if ($top10multiancestors !== null && count($top10multiancestors)) { |
|
153 | + foreach ($top10multiancestors as $pid => $count) { |
|
154 | 154 | $indi = Individual::getInstance($pid, $this->sosa_provider->getTree()); |
155 | - if($indi !== null && $indi->canShowName()) { |
|
155 | + if ($indi !== null && $indi->canShowName()) { |
|
156 | 156 | array_key_exists($count, $top10ancestors) ? |
157 | - $top10ancestors[$count][] = $indi: |
|
158 | - $top10ancestors[$count] = array($count => $indi); |
|
157 | + $top10ancestors[$count][] = $indi : $top10ancestors[$count] = array($count => $indi); |
|
159 | 158 | } |
160 | 159 | } |
161 | 160 | } |
@@ -169,27 +168,27 @@ discard block |
||
169 | 168 | private function htmlAncestorDispersionG2() |
170 | 169 | { |
171 | 170 | $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2); |
172 | - if(count($ancestorsDispGen2) == 0) return; |
|
171 | + if (count($ancestorsDispGen2) == 0) return; |
|
173 | 172 | |
174 | 173 | $size = '600x300'; |
175 | 174 | |
176 | 175 | $total = array_sum($ancestorsDispGen2); |
177 | 176 | $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
178 | - $father = array ( |
|
177 | + $father = array( |
|
179 | 178 | 'color' => '84beff', |
180 | 179 | 'count' => $father_count, |
181 | 180 | 'perc' => Functions::safeDivision($father_count, $total), |
182 | 181 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat') |
183 | 182 | ); |
184 | 183 | $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
185 | - $mother = array ( |
|
184 | + $mother = array( |
|
186 | 185 | 'color' => 'ffd1dc', |
187 | 186 | 'count' => $mother_count, |
188 | 187 | 'perc' => Functions::safeDivision($mother_count, $total), |
189 | 188 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot') |
190 | 189 | ); |
191 | 190 | $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
192 | - $shared = array ( |
|
191 | + $shared = array( |
|
193 | 192 | 'color' => '777777', |
194 | 193 | 'count' => $shared_count, |
195 | 194 | 'perc' => Functions::safeDivision($shared_count, $total), |
@@ -199,10 +198,10 @@ discard block |
||
199 | 198 | $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc'])); |
200 | 199 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion'); |
201 | 200 | $chl = |
202 | - $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' . |
|
203 | - $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' . |
|
204 | - $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1); |
|
205 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
201 | + $father['name'].' - '.I18N::percentage($father['perc'], 1).'|'. |
|
202 | + $shared['name'].' - '.I18N::percentage($shared['perc'], 1).'|'. |
|
203 | + $mother['name'].' - '.I18N::percentage($mother['perc'], 1); |
|
204 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
206 | 205 | } |
207 | 206 | |
208 | 207 | /** |
@@ -226,7 +225,7 @@ discard block |
||
226 | 225 | $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0; |
227 | 226 | $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0; |
228 | 227 | $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
229 | - $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha; |
|
228 | + $total = $total_fatfat + $total_fatmot + $total_motfat + $total_motmot + $total_sha; |
|
230 | 229 | |
231 | 230 | $chd = $this->arrayToExtendedEncoding(array( |
232 | 231 | 4095 * Functions::safeDivision($total_fatfat, $total), |
@@ -237,12 +236,12 @@ discard block |
||
237 | 236 | )); |
238 | 237 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3'); |
239 | 238 | $chl = |
240 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' . |
|
241 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' . |
|
242 | - I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' . |
|
243 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' . |
|
244 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
245 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
239 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat').' - '.I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1).'|'. |
|
240 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot').' - '.I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1).'|'. |
|
241 | + I18N::translate('Shared').' - '.I18N::percentage(Functions::safeDivision($total_sha, $total), 1).'|'. |
|
242 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat').' - '.I18N::percentage(Functions::safeDivision($total_motfat, $total), 1).'|'. |
|
243 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot').' - '.I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
244 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
246 | 245 | } |
247 | 246 | |
248 | 247 | /** |
@@ -251,15 +250,15 @@ discard block |
||
251 | 250 | */ |
252 | 251 | private function htmlAncestorGenDepthG3() { |
253 | 252 | $ancestorsGenDepth3 = $this->sosa_provider->getGenerationDepthStatsAtGen(3); |
254 | - if(count($ancestorsGenDepth3) == 0) return; |
|
253 | + if (count($ancestorsGenDepth3) == 0) return; |
|
255 | 254 | |
256 | 255 | $ancestors = array(); |
257 | 256 | $chd_mean = array(); |
258 | 257 | $chd_error_low = array(); |
259 | 258 | $chd_error_high = array(); |
260 | - foreach($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
259 | + foreach ($ancestorsGenDepth3 as $sosa => $genDepthStat) { |
|
261 | 260 | $ancestor = Individual::getInstance($genDepthStat['root_ancestor_id'], $this->sosa_provider->getTree()); |
262 | - if($ancestor !== null && $ancestor->canShowName()) { |
|
261 | + if ($ancestor !== null && $ancestor->canShowName()) { |
|
263 | 262 | $tmp = $ancestor->getAllNames(); |
264 | 263 | $ancestors[] = Filter::escapeUrl($tmp[$ancestor->getPrimaryName()]['fullNN']); |
265 | 264 | } |
@@ -272,7 +271,7 @@ discard block |
||
272 | 271 | } |
273 | 272 | |
274 | 273 | $maxChd = ceil(max($chd_error_high)); |
275 | - $chd = implode(',', $chd_mean) . '|' . implode(',', $chd_error_low) . '|' . implode(',', $chd_error_high); |
|
274 | + $chd = implode(',', $chd_mean).'|'.implode(',', $chd_error_low).'|'.implode(',', $chd_error_high); |
|
276 | 275 | $chxl = implode('|', array_reverse($ancestors)); |
277 | 276 | $chbh = 30; |
278 | 277 | $chs = count($ancestors) * $chbh + 50; |
@@ -294,9 +293,9 @@ discard block |
||
294 | 293 | if ($value < 0) { |
295 | 294 | $value = 0; |
296 | 295 | } |
297 | - $first = (int) ($value / 64); |
|
296 | + $first = (int)($value / 64); |
|
298 | 297 | $second = $value % 64; |
299 | - $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second]; |
|
298 | + $encoding .= $xencoding[(int)$first].$xencoding[(int)$second]; |
|
300 | 299 | } |
301 | 300 | |
302 | 301 | return $encoding; |
@@ -31,11 +31,11 @@ discard block |
||
31 | 31 | <?php |
32 | 32 | /** @var \Fisharebest\Webtrees\Individual $root_indi */ |
33 | 33 | $root_indi = $this->data->get('root_indi'); |
34 | - if($root_indi !== null && $root_indi->canShowName()) { ?> |
|
34 | + if ($root_indi !== null && $root_indi->canShowName()) { ?> |
|
35 | 35 | <h4 class="center"><?= I18N::translate('%s: %s', I18N::translate('Root individual'), $root_indi->getFullName()); ?><h4> |
36 | 36 | <?php } ?> |
37 | 37 | |
38 | - <?php if($this->data->get('is_setup')) { |
|
38 | + <?php if ($this->data->get('is_setup')) { |
|
39 | 39 | $general_stats = $this->data->get('general_stats'); ?> |
40 | 40 | <h3><?php echo I18N::translate('General statistics'); ?></h3> |
41 | 41 | <div class="maj-table"> |
@@ -57,7 +57,7 @@ discard block |
||
57 | 57 | </div> |
58 | 58 | <div class="maj-row"> |
59 | 59 | <div class="label"><?php echo I18N::translate('Generation mean duration'); ?></div> |
60 | - <div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'], I18N::number($general_stats['mean_gen_time'], 1)); ?></div> |
|
60 | + <div class="value"><?php echo I18N::plural('%s year', '%s years', $general_stats['mean_gen_time'], I18N::number($general_stats['mean_gen_time'], 1)); ?></div> |
|
61 | 61 | </div> |
62 | 62 | </div> |
63 | 63 | |
@@ -97,7 +97,7 @@ discard block |
||
97 | 97 | </tr> |
98 | 98 | </thead> |
99 | 99 | <tbody> |
100 | - <?php foreach($this->data->get('generation_stats') as $gen => $row) { ?> |
|
100 | + <?php foreach ($this->data->get('generation_stats') as $gen => $row) { ?> |
|
101 | 101 | <tr class="maj-row"> |
102 | 102 | <td class="label"><?php echo I18N::translate('<strong>G%d</strong>', $gen); ?></td> |
103 | 103 | <td class="label"><?php echo I18N::translate('%1$s <> %2$s', $row['gen_min_birth'], $row['gen_max_birth']); ?></td> |
@@ -111,7 +111,7 @@ discard block |
||
111 | 111 | <td class="value"><?php echo I18N::number($row['different']); ?></td> |
112 | 112 | <td class="value left percent_container"> |
113 | 113 | <div class="percent_frame"> |
114 | - <div class="percent_cell" style="width:<?php echo 100*$row['perc_different'] ?>%;"> |
|
114 | + <div class="percent_cell" style="width:<?php echo 100 * $row['perc_different'] ?>%;"> |
|
115 | 115 | <?php echo I18N::percentage($row['perc_different']); ?> |
116 | 116 | </div> |
117 | 117 | </div> |
@@ -131,17 +131,17 @@ discard block |
||
131 | 131 | I18N::translate('%s generation'), |
132 | 132 | I18N::translate('%s generations'), |
133 | 133 | $this->data->get('mean_gen_depth'), |
134 | - I18N::number($this->data->get('mean_gen_depth'),2) |
|
134 | + I18N::number($this->data->get('mean_gen_depth'), 2) |
|
135 | 135 | ) |
136 | 136 | ). |
137 | - ' — ' . |
|
137 | + ' — '. |
|
138 | 138 | I18N::translate( |
139 | 139 | 'Standard deviation: %s', |
140 | 140 | I18N::plural( |
141 | 141 | I18N::translate('%s generation'), |
142 | 142 | I18N::translate('%s generations'), |
143 | 143 | $this->data->get('stddev_gen_depth'), |
144 | - I18N::number($this->data->get('stddev_gen_depth'),2) |
|
144 | + I18N::number($this->data->get('stddev_gen_depth'), 2) |
|
145 | 145 | ) |
146 | 146 | ); |
147 | 147 | ?> |
@@ -153,17 +153,17 @@ discard block |
||
153 | 153 | |
154 | 154 | <?php |
155 | 155 | $top10_multi_ancestors = $this->data->get('top10multiancestors'); |
156 | - if(count($top10_multi_ancestors) > 0) { ?> |
|
156 | + if (count($top10_multi_ancestors) > 0) { ?> |
|
157 | 157 | <h3><?= I18N::translate('Most duplicated root Sosa ancestors'); ?></h3> |
158 | 158 | <div class="maj-table"> |
159 | - <?php foreach($top10_multi_ancestors as $count => $indis) { ?> |
|
159 | + <?php foreach ($top10_multi_ancestors as $count => $indis) { ?> |
|
160 | 160 | <div class="maj-row"> |
161 | 161 | <div class="label"><?= I18N::translate('%s times', I18N::number($count)); ?></div> |
162 | 162 | <div class="value"><?php |
163 | 163 | echo implode( |
164 | 164 | I18N::$list_separator, |
165 | 165 | array_map(function(Individual $indi) { |
166 | - return '<a href="'. $indi->getHtmlUrl(). '">'. $indi->getFullName() . ' ' . $indi->getSexImage() . '</a>'; |
|
166 | + return '<a href="'.$indi->getHtmlUrl().'">'.$indi->getFullName().' '.$indi->getSexImage().'</a>'; |
|
167 | 167 | }, $indis) |
168 | 168 | ); |
169 | 169 | ?></div> |
@@ -174,14 +174,14 @@ discard block |
||
174 | 174 | |
175 | 175 | <h3><?php echo I18N::translate('Known Sosa ancestors\' family dispersion'); ?></h3> |
176 | 176 | <div class="center"> |
177 | - <?php echo $this->data->get('chart_img_g2') ?: '' ; ?> |
|
178 | - <?php echo $this->data->get('chart_img_g3') ?: '' ; ?> |
|
177 | + <?php echo $this->data->get('chart_img_g2') ?: ''; ?> |
|
178 | + <?php echo $this->data->get('chart_img_g3') ?: ''; ?> |
|
179 | 179 | <!-- <canvas id="chart_ancestors_g2" width="300" height="300"></canvas> --> |
180 | 180 | </div> |
181 | 181 | |
182 | 182 | <h3><?php echo I18N::translate('Mean generation depth by grandparents'); ?></h3> |
183 | 183 | <div class="center"> |
184 | - <?php echo $this->data->get('chart_img_gendepth3') ?: '' ; ?> |
|
184 | + <?php echo $this->data->get('chart_img_gendepth3') ?: ''; ?> |
|
185 | 185 | </div> |
186 | 186 | |
187 | 187 | <?php } else { ?> |
@@ -84,18 +84,18 @@ discard block |
||
84 | 84 | * @param User $user |
85 | 85 | */ |
86 | 86 | public function __construct(Tree $tree, User $user = null) { |
87 | - if(self::$default_user === null) |
|
87 | + if (self::$default_user === null) |
|
88 | 88 | self::$default_user = User::find(-1); |
89 | 89 | |
90 | 90 | $this->tree = $tree; |
91 | 91 | $this->user = $user; |
92 | 92 | $this->is_setup = true; |
93 | - if($this->user === null) $this->user = Auth::user(); |
|
94 | - if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
93 | + if ($this->user === null) $this->user = Auth::user(); |
|
94 | + if (strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
95 | 95 | |
96 | 96 | // Check if the user, or the default user, has a root already setup; |
97 | - if(empty($this->getRootIndiId())) { |
|
98 | - if($this->user == self::$default_user) { // If the default user is not setup |
|
97 | + if (empty($this->getRootIndiId())) { |
|
98 | + if ($this->user == self::$default_user) { // If the default user is not setup |
|
99 | 99 | $this->is_setup = false; |
100 | 100 | } |
101 | 101 | else { |
@@ -145,7 +145,7 @@ discard block |
||
145 | 145 | */ |
146 | 146 | public function getRootIndi() { |
147 | 147 | $root_indi_id = $this->getRootIndiId(); |
148 | - if(!empty($root_indi_id)) { |
|
148 | + if (!empty($root_indi_id)) { |
|
149 | 149 | return Individual::getInstance($root_indi_id, $this->tree); |
150 | 150 | } |
151 | 151 | return null; |
@@ -159,7 +159,7 @@ discard block |
||
159 | 159 | * Remove all Sosa entries related to the gedcom file and user |
160 | 160 | */ |
161 | 161 | public function deleteAll() { |
162 | - if(!$this->is_setup) return; |
|
162 | + if (!$this->is_setup) return; |
|
163 | 163 | Database::prepare( |
164 | 164 | 'DELETE FROM `##maj_sosa`'. |
165 | 165 | ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
@@ -175,12 +175,12 @@ discard block |
||
175 | 175 | * @param int $sosa |
176 | 176 | */ |
177 | 177 | public function deleteAncestors($sosa) { |
178 | - if(!$this->is_setup) return; |
|
178 | + if (!$this->is_setup) return; |
|
179 | 179 | $gen = Functions::getGeneration($sosa); |
180 | 180 | Database::prepare( |
181 | 181 | 'DELETE FROM `##maj_sosa`'. |
182 | - ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
|
183 | - ' AND majs_gen >= :gen' . |
|
182 | + ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id'. |
|
183 | + ' AND majs_gen >= :gen'. |
|
184 | 184 | ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
185 | 185 | )->execute(array( |
186 | 186 | 'tree_id' => $this->tree->getTreeId(), |
@@ -195,7 +195,7 @@ discard block |
||
195 | 195 | * @param array $sosa_records |
196 | 196 | */ |
197 | 197 | public function insertOrUpdate($sosa_records) { |
198 | - if(!$this->is_setup) return; |
|
198 | + if (!$this->is_setup) return; |
|
199 | 199 | |
200 | 200 | $treeid = $this->tree->getTreeId(); |
201 | 201 | $userid = $this->user->getUserId(); |
@@ -203,9 +203,9 @@ discard block |
||
203 | 203 | $values_table = array(); |
204 | 204 | |
205 | 205 | $i = 0; |
206 | - foreach ($sosa_records as $row) { |
|
206 | + foreach ($sosa_records as $row) { |
|
207 | 207 | $gen = Functions::getGeneration($row['sosa']); |
208 | - if($gen <= self::MAX_DB_GENERATIONS) { |
|
208 | + if ($gen <= self::MAX_DB_GENERATIONS) { |
|
209 | 209 | $questionmarks_table[] = |
210 | 210 | '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')'; |
211 | 211 | $values_table = array_merge( |
@@ -226,9 +226,9 @@ discard block |
||
226 | 226 | $i++; |
227 | 227 | } |
228 | 228 | |
229 | - $sql = 'REPLACE INTO `##maj_sosa`' . |
|
230 | - ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' . |
|
231 | - ' VALUES '. implode(',', $questionmarks_table); |
|
229 | + $sql = 'REPLACE INTO `##maj_sosa`'. |
|
230 | + ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)'. |
|
231 | + ' VALUES '.implode(',', $questionmarks_table); |
|
232 | 232 | Database::prepare($sql)->execute($values_table); |
233 | 233 | } |
234 | 234 | |
@@ -244,7 +244,7 @@ discard block |
||
244 | 244 | * @return array Array of sosa numbers |
245 | 245 | */ |
246 | 246 | public function getSosaNumbers(Individual $indi) { |
247 | - if(!$this->is_setup) return array(); |
|
247 | + if (!$this->is_setup) return array(); |
|
248 | 248 | return Database::prepare( |
249 | 249 | 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
250 | 250 | ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -261,7 +261,7 @@ discard block |
||
261 | 261 | * @return number Last generation if found, 1 otherwise |
262 | 262 | */ |
263 | 263 | public function getLastGeneration() { |
264 | - if(!$this->is_setup) return; |
|
264 | + if (!$this->is_setup) return; |
|
265 | 265 | return Database::prepare( |
266 | 266 | 'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
267 | 267 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -280,13 +280,13 @@ discard block |
||
280 | 280 | * |
281 | 281 | * @return array Associative array of Sosa ancestors, with their generation, comma separated |
282 | 282 | */ |
283 | - public function getAllSosaWithGenerations(){ |
|
284 | - if(!$this->is_setup) return array(); |
|
283 | + public function getAllSosaWithGenerations() { |
|
284 | + if (!$this->is_setup) return array(); |
|
285 | 285 | return Database::prepare( |
286 | - 'SELECT majs_i_id AS indi,' . |
|
287 | - ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
|
288 | - ' FROM `##maj_sosa`' . |
|
289 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
|
286 | + 'SELECT majs_i_id AS indi,'. |
|
287 | + ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations'. |
|
288 | + ' FROM `##maj_sosa`'. |
|
289 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
290 | 290 | ' GROUP BY majs_i_id' |
291 | 291 | )->execute(array( |
292 | 292 | 'tree_id' => $this->tree->getTreeId(), |
@@ -300,13 +300,13 @@ discard block |
||
300 | 300 | * @param number $gen Generation |
301 | 301 | * @return array Array of Sosa individuals |
302 | 302 | */ |
303 | - public function getSosaListAtGeneration($gen){ |
|
304 | - if(!$this->is_setup) return array(); |
|
305 | - if(!$this->sosa_list_by_gen) |
|
303 | + public function getSosaListAtGeneration($gen) { |
|
304 | + if (!$this->is_setup) return array(); |
|
305 | + if (!$this->sosa_list_by_gen) |
|
306 | 306 | $this->sosa_list_by_gen = array(); |
307 | 307 | |
308 | - if($gen){ |
|
309 | - if(!isset($this->sosa_list_by_gen[$gen])){ |
|
308 | + if ($gen) { |
|
309 | + if (!isset($this->sosa_list_by_gen[$gen])) { |
|
310 | 310 | $this->sosa_list_by_gen[$gen] = Database::prepare( |
311 | 311 | 'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
312 | 312 | ' FROM `##maj_sosa`'. |
@@ -331,13 +331,13 @@ discard block |
||
331 | 331 | * @param number $gen Generation |
332 | 332 | * @return array Array of Sosa families |
333 | 333 | */ |
334 | - public function getFamilySosaListAtGeneration($gen){ |
|
335 | - if(!$this->is_setup) return array(); |
|
336 | - if(!$this->sosa_fam_list_by_gen) |
|
334 | + public function getFamilySosaListAtGeneration($gen) { |
|
335 | + if (!$this->is_setup) return array(); |
|
336 | + if (!$this->sosa_fam_list_by_gen) |
|
337 | 337 | $this->sosa_fam_list_by_gen = array(); |
338 | 338 | |
339 | - if($gen){ |
|
340 | - if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
339 | + if ($gen) { |
|
340 | + if (!isset($this->sosa_fam_list_by_gen[$gen])) { |
|
341 | 341 | $this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
342 | 342 | 'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
343 | 343 | ' FROM `##families`'. |
@@ -367,9 +367,9 @@ discard block |
||
367 | 367 | * @param number $gen Generation |
368 | 368 | * @return array Array of Sosa individuals |
369 | 369 | */ |
370 | - public function getMissingSosaListAtGeneration($gen){ |
|
371 | - if(!$this->is_setup) return array(); |
|
372 | - if($gen){ |
|
370 | + public function getMissingSosaListAtGeneration($gen) { |
|
371 | + if (!$this->is_setup) return array(); |
|
372 | + if ($gen) { |
|
373 | 373 | return $this->sosa_list_by_gen[$gen] = Database::prepare( |
374 | 374 | 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
375 | 375 | ' FROM `##maj_sosa` schild'. |
@@ -408,10 +408,10 @@ discard block |
||
408 | 408 | * @return array Statistics array |
409 | 409 | */ |
410 | 410 | public function getStatisticsByGeneration() { |
411 | - if(!$this->is_setup) return array(); |
|
412 | - if(!$this->statistics_tab) { |
|
411 | + if (!$this->is_setup) return array(); |
|
412 | + if (!$this->statistics_tab) { |
|
413 | 413 | $this->statistics_tab = array(); |
414 | - if($maxGeneration = $this->getLastGeneration()) { |
|
414 | + if ($maxGeneration = $this->getLastGeneration()) { |
|
415 | 415 | for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
416 | 416 | $birthStats = $this->getStatsBirthYearInGeneration($gen); |
417 | 417 | $this->statistics_tab[$gen] = array( |
@@ -436,9 +436,9 @@ discard block |
||
436 | 436 | * @return int |
437 | 437 | */ |
438 | 438 | public function getTotalIndividuals() { |
439 | - if(!$this->is_setup) return 0; |
|
439 | + if (!$this->is_setup) return 0; |
|
440 | 440 | return Database::prepare( |
441 | - 'SELECT COUNT(*) FROM `##individuals`' . |
|
441 | + 'SELECT COUNT(*) FROM `##individuals`'. |
|
442 | 442 | ' WHERE i_file = :tree_id') |
443 | 443 | ->execute(array('tree_id' => $this->tree->getTreeId())) |
444 | 444 | ->fetchOne() ?: 0; |
@@ -449,10 +449,10 @@ discard block |
||
449 | 449 | * |
450 | 450 | * @return number Number of Sosas |
451 | 451 | */ |
452 | - public function getSosaCount(){ |
|
453 | - if(!$this->is_setup) return 0; |
|
452 | + public function getSosaCount() { |
|
453 | + if (!$this->is_setup) return 0; |
|
454 | 454 | return Database::prepare( |
455 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
455 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
456 | 456 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
457 | 457 | ->execute(array( |
458 | 458 | 'tree_id' => $this->tree->getTreeId(), |
@@ -466,10 +466,10 @@ discard block |
||
466 | 466 | * @param number $gen Generation |
467 | 467 | * @return number Number of Sosas in generation |
468 | 468 | */ |
469 | - public function getSosaCountAtGeneration($gen){ |
|
470 | - if(!$this->is_setup) return 0; |
|
469 | + public function getSosaCountAtGeneration($gen) { |
|
470 | + if (!$this->is_setup) return 0; |
|
471 | 471 | return Database::prepare( |
472 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
472 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
473 | 473 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
474 | 474 | ' AND majs_gen= :gen') |
475 | 475 | ->execute(array( |
@@ -485,10 +485,10 @@ discard block |
||
485 | 485 | * @param number $gen Generation |
486 | 486 | * @return number Total number of Sosas up to generation |
487 | 487 | */ |
488 | - public function getSosaCountUpToGeneration($gen){ |
|
489 | - if(!$this->is_setup) return 0; |
|
488 | + public function getSosaCountUpToGeneration($gen) { |
|
489 | + if (!$this->is_setup) return 0; |
|
490 | 490 | return Database::prepare( |
491 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
491 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
492 | 492 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
493 | 493 | ' AND majs_gen <= :gen') |
494 | 494 | ->execute(array( |
@@ -503,10 +503,10 @@ discard block |
||
503 | 503 | * |
504 | 504 | * @return number Total number of distinct individual |
505 | 505 | */ |
506 | - public function getDifferentSosaCount(){ |
|
507 | - if(!$this->is_setup) return 0; |
|
506 | + public function getDifferentSosaCount() { |
|
507 | + if (!$this->is_setup) return 0; |
|
508 | 508 | return Database::prepare( |
509 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
509 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
510 | 510 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
511 | 511 | ->execute(array( |
512 | 512 | 'tree_id' => $this->tree->getTreeId(), |
@@ -520,10 +520,10 @@ discard block |
||
520 | 520 | * @param number $gen Generation |
521 | 521 | * @return number Number of distinct Sosa individuals up to generation |
522 | 522 | */ |
523 | - public function getDifferentSosaCountUpToGeneration($gen){ |
|
524 | - if(!$this->is_setup) return 0; |
|
523 | + public function getDifferentSosaCountUpToGeneration($gen) { |
|
524 | + if (!$this->is_setup) return 0; |
|
525 | 525 | return Database::prepare( |
526 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
526 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
527 | 527 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
528 | 528 | ' AND majs_gen <= :gen') |
529 | 529 | ->execute(array( |
@@ -545,8 +545,8 @@ discard block |
||
545 | 545 | * @param number $gen Generation |
546 | 546 | * @return array Birth statistics array |
547 | 547 | */ |
548 | - public function getStatsBirthYearInGeneration($gen){ |
|
549 | - if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
548 | + public function getStatsBirthYearInGeneration($gen) { |
|
549 | + if (!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
550 | 550 | return Database::prepare( |
551 | 551 | 'SELECT'. |
552 | 552 | ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'. |
@@ -567,25 +567,25 @@ discard block |
||
567 | 567 | * |
568 | 568 | * @return number|NULL Mean generation time |
569 | 569 | */ |
570 | - public function getMeanGenerationTime(){ |
|
571 | - if(!$this->is_setup) return; |
|
572 | - if(!$this->statistics_tab){ |
|
570 | + public function getMeanGenerationTime() { |
|
571 | + if (!$this->is_setup) return; |
|
572 | + if (!$this->statistics_tab) { |
|
573 | 573 | $this->getStatisticsByGeneration(); |
574 | 574 | } |
575 | 575 | //Linear regression on x=generation and y=birthdate |
576 | - $sum_xy = $sum_x = $sum_y= $sum_x2 = $n = 0; |
|
577 | - foreach($this->statistics_tab as $gen=>$stats){ |
|
578 | - if(!is_null($stats['avgBirth'])) { |
|
576 | + $sum_xy = $sum_x = $sum_y = $sum_x2 = $n = 0; |
|
577 | + foreach ($this->statistics_tab as $gen=>$stats) { |
|
578 | + if (!is_null($stats['avgBirth'])) { |
|
579 | 579 | $n++; |
580 | - $sum_xy+=$gen*$stats['avgBirth']; |
|
581 | - $sum_x+=$gen; |
|
582 | - $sum_y+=$stats['avgBirth']; |
|
583 | - $sum_x2+=$gen*$gen; |
|
580 | + $sum_xy += $gen * $stats['avgBirth']; |
|
581 | + $sum_x += $gen; |
|
582 | + $sum_y += $stats['avgBirth']; |
|
583 | + $sum_x2 += $gen * $gen; |
|
584 | 584 | } |
585 | 585 | } |
586 | - $denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
587 | - if($denom!=0){ |
|
588 | - return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
586 | + $denom = ($n * $sum_x2) - ($sum_x * $sum_x); |
|
587 | + if ($denom != 0) { |
|
588 | + return -(($n * $sum_xy) - ($sum_x * $sum_y)) / ($denom); |
|
589 | 589 | } |
590 | 590 | return null; |
591 | 591 | } |
@@ -609,7 +609,7 @@ discard block |
||
609 | 609 | * @return array |
610 | 610 | */ |
611 | 611 | public function getGenerationDepthStatsAtGen($gen) { |
612 | - if(!$this->is_setup) return array(); |
|
612 | + if (!$this->is_setup) return array(); |
|
613 | 613 | $gen_depth_stats_raw = Database::prepare( |
614 | 614 | 'SELECT stats_by_gen.root_ancestor AS root_ancestor_sosa,'. |
615 | 615 | ' sosa_list.majs_i_id as root_ancestor_id,'. |
@@ -684,14 +684,14 @@ discard block |
||
684 | 684 | * @return array |
685 | 685 | */ |
686 | 686 | public function getAncestorDispersionForGen($gen) { |
687 | - if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
687 | + if (!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
688 | 688 | return Database::prepare( |
689 | 689 | 'SELECT branches, count(i_id)'. |
690 | 690 | ' FROM ('. |
691 | 691 | ' SELECT i_id,'. |
692 | 692 | ' CASE'. |
693 | 693 | ' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
694 | - ' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
694 | + ' ELSE -1'.// We put all ancestors shared between some branches in the same bucket |
|
695 | 695 | ' END branches'. |
696 | 696 | ' FROM ('. |
697 | 697 | ' SELECT DISTINCT majs_i_id i_id,'. |
@@ -724,7 +724,7 @@ discard block |
||
724 | 724 | * @return array |
725 | 725 | */ |
726 | 726 | public function getTopMultiSosaAncestorsNoTies($limit) { |
727 | - if(!$this->is_setup) return array(); |
|
727 | + if (!$this->is_setup) return array(); |
|
728 | 728 | return Database::prepare( |
729 | 729 | 'SELECT sosa_i_id, sosa_count FROM ('. |
730 | 730 | ' SELECT'. |
@@ -737,20 +737,20 @@ discard block |
||
737 | 737 | ' COUNT(sosa.majs_sosa) sosa_count,'. |
738 | 738 | ' MIN(sosa.majs_sosa) sosa_min'. |
739 | 739 | ' FROM ##maj_sosa AS sosa'. |
740 | - ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
740 | + ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.// Link to sosa's father |
|
741 | 741 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
742 | 742 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
743 | - ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
743 | + ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.// Link to sosa's mother |
|
744 | 744 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
745 | 745 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
746 | 746 | ' WHERE sosa.majs_gedcom_id = :tree_id'. |
747 | 747 | ' AND sosa.majs_user_id = :user_id'. |
748 | - ' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
748 | + ' AND sosa_fat.majs_sosa IS NULL'.// We keep only root individuals, i.e. those with no father or mother |
|
749 | 749 | ' AND sosa_mot.majs_sosa IS NULL'. |
750 | 750 | ' GROUP BY sosa.majs_i_id'. |
751 | - ' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
751 | + ' HAVING COUNT(sosa.majs_sosa) > 1'.// Limit to the duplicate sosas. |
|
752 | 752 | ' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
753 | - ' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
753 | + ' LIMIT '.($limit + 1).// We want to select one more than required |
|
754 | 754 | ' ) AS top_sosa,'. |
755 | 755 | ' (SELECT @prev_count := 0, @keep := 0) x'. |
756 | 756 | ' ORDER BY top_sosa.sosa_count ASC'. |