@@ -29,538 +29,538 @@  | 
                                                    ||
| 29 | 29 | */  | 
                                                        
| 30 | 30 | class SosaStatisticsService  | 
                                                        
| 31 | 31 |  { | 
                                                        
| 32 | - private UserInterface $user;  | 
                                                        |
| 33 | - private Tree $tree;  | 
                                                        |
| 34 | -  | 
                                                        |
| 35 | - /**  | 
                                                        |
| 36 | - * Constructor for Sosa Statistics Service  | 
                                                        |
| 37 | - *  | 
                                                        |
| 38 | - * @param Tree $tree  | 
                                                        |
| 39 | - * @param UserInterface $user  | 
                                                        |
| 40 | - */  | 
                                                        |
| 41 | - public function __construct(Tree $tree, UserInterface $user)  | 
                                                        |
| 42 | -    { | 
                                                        |
| 43 | - $this->tree = $tree;  | 
                                                        |
| 44 | - $this->user = $user;  | 
                                                        |
| 45 | - }  | 
                                                        |
| 46 | -  | 
                                                        |
| 47 | - /**  | 
                                                        |
| 48 | - * Check if PDO support the queries used in Sosa statistics.  | 
                                                        |
| 49 | - *  | 
                                                        |
| 50 | - * SQLite does not support RIGHT and FULL JOIN, and POWER/SQRT require a specific compilation flag.  | 
                                                        |
| 51 | - *  | 
                                                        |
| 52 | - * @return bool  | 
                                                        |
| 53 | - */  | 
                                                        |
| 54 | - public function isPdoSupported(): bool  | 
                                                        |
| 55 | -    { | 
                                                        |
| 56 | - return DB::connection()->getDriverName() !== 'sqlite';  | 
                                                        |
| 57 | - }  | 
                                                        |
| 58 | -  | 
                                                        |
| 59 | - /**  | 
                                                        |
| 60 | - * Return the root individual for the reference tree and user.  | 
                                                        |
| 61 | - *  | 
                                                        |
| 62 | - * @return Individual|NULL  | 
                                                        |
| 63 | - */  | 
                                                        |
| 64 | - public function rootIndividual(): ?Individual  | 
                                                        |
| 65 | -    { | 
                                                        |
| 66 | - $root_indi_id = $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID');  | 
                                                        |
| 67 | - return Registry::individualFactory()->make($root_indi_id, $this->tree);  | 
                                                        |
| 68 | - }  | 
                                                        |
| 69 | -  | 
                                                        |
| 70 | - /**  | 
                                                        |
| 71 | - * Get the highest generation for the reference tree and user.  | 
                                                        |
| 72 | - *  | 
                                                        |
| 73 | - * @return int  | 
                                                        |
| 74 | - */  | 
                                                        |
| 75 | - public function maxGeneration(): int  | 
                                                        |
| 76 | -    { | 
                                                        |
| 77 | -        return (int) DB::table('maj_sosa') | 
                                                        |
| 78 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 79 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 80 | -            ->max('majs_gen'); | 
                                                        |
| 81 | - }  | 
                                                        |
| 82 | -  | 
                                                        |
| 83 | - /**  | 
                                                        |
| 84 | - * Get the total count of individuals in the tree.  | 
                                                        |
| 85 | - *  | 
                                                        |
| 86 | - * @return int  | 
                                                        |
| 87 | - */  | 
                                                        |
| 88 | - public function totalIndividuals(): int  | 
                                                        |
| 89 | -    { | 
                                                        |
| 90 | -        return DB::table('individuals') | 
                                                        |
| 91 | -            ->where('i_file', '=', $this->tree->id()) | 
                                                        |
| 92 | - ->count();  | 
                                                        |
| 93 | - }  | 
                                                        |
| 94 | -  | 
                                                        |
| 95 | - /**  | 
                                                        |
| 96 | - * Get the total count of Sosa ancestors for all generations  | 
                                                        |
| 97 | - *  | 
                                                        |
| 98 | - * @return int  | 
                                                        |
| 99 | - */  | 
                                                        |
| 100 | - public function totalAncestors(): int  | 
                                                        |
| 101 | -    { | 
                                                        |
| 102 | -        return DB::table('maj_sosa') | 
                                                        |
| 103 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 104 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 105 | - ->count();  | 
                                                        |
| 106 | - }  | 
                                                        |
| 107 | -  | 
                                                        |
| 108 | - /**  | 
                                                        |
| 109 | - * Get the total count of Sosa ancestors for a generation  | 
                                                        |
| 110 | - *  | 
                                                        |
| 111 | - * @return int  | 
                                                        |
| 112 | - */  | 
                                                        |
| 113 | - public function totalAncestorsAtGeneration(int $gen): int  | 
                                                        |
| 114 | -    { | 
                                                        |
| 115 | -        return DB::table('maj_sosa') | 
                                                        |
| 116 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 117 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 118 | -            ->where('majs_gen', '=', $gen) | 
                                                        |
| 119 | - ->count();  | 
                                                        |
| 120 | - }  | 
                                                        |
| 121 | -  | 
                                                        |
| 122 | - /**  | 
                                                        |
| 123 | - * Get the total count of distinct Sosa ancestors for all generations  | 
                                                        |
| 124 | - *  | 
                                                        |
| 125 | - * @return int  | 
                                                        |
| 126 | - */  | 
                                                        |
| 127 | - public function totalDistinctAncestors(): int  | 
                                                        |
| 128 | -    { | 
                                                        |
| 129 | -        return DB::table('maj_sosa') | 
                                                        |
| 130 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 131 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 132 | - ->distinct()  | 
                                                        |
| 133 | -            ->count('majs_i_id'); | 
                                                        |
| 134 | - }  | 
                                                        |
| 135 | -  | 
                                                        |
| 136 | - /**  | 
                                                        |
| 137 | - * Get the mean generation time, as the slope of the linear regression of birth years vs generations  | 
                                                        |
| 138 | - *  | 
                                                        |
| 139 | - * @return float  | 
                                                        |
| 140 | - */  | 
                                                        |
| 141 | - public function meanGenerationTime(): float  | 
                                                        |
| 142 | -    { | 
                                                        |
| 143 | -        $row = DB::table('maj_sosa') | 
                                                        |
| 144 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 145 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 146 | -            ->whereNotNull('majs_birth_year') | 
                                                        |
| 147 | -            ->selectRaw('COUNT(majs_sosa) AS n') | 
                                                        |
| 148 | -            ->selectRaw('SUM(majs_gen * majs_birth_year) AS sum_xy') | 
                                                        |
| 149 | -            ->selectRaw('SUM(majs_gen) AS sum_x') | 
                                                        |
| 150 | -            ->selectRaw('SUM(majs_birth_year) AS sum_y') | 
                                                        |
| 151 | -            ->selectRaw('SUM(majs_gen * majs_gen) AS sum_x2') | 
                                                        |
| 152 | - ->get()->first();  | 
                                                        |
| 153 | -  | 
                                                        |
| 154 | - return $row->n == 0 ? 0 :  | 
                                                        |
| 155 | - -($row->n * $row->sum_xy - $row->sum_x * $row->sum_y) / ($row->n * $row->sum_x2 - pow($row->sum_x, 2));  | 
                                                        |
| 156 | - }  | 
                                                        |
| 157 | -  | 
                                                        |
| 158 | - /**  | 
                                                        |
| 159 | - * Get the statistic array detailed by generation.  | 
                                                        |
| 160 | - * Statistics for each generation are:  | 
                                                        |
| 161 | - * - The number of Sosa in generation  | 
                                                        |
| 162 | - * - The number of Sosa up to generation  | 
                                                        |
| 163 | - * - The number of distinct Sosa up to generation  | 
                                                        |
| 164 | - * - The year of the first birth in generation  | 
                                                        |
| 165 | - * - The year of the first estimated birth in generation  | 
                                                        |
| 166 | - * - The year of the last birth in generation  | 
                                                        |
| 167 | - * - The year of the last estimated birth in generation  | 
                                                        |
| 168 | - * - The average year of birth in generation  | 
                                                        |
| 169 | - *  | 
                                                        |
| 170 | - * @return array<int, array<string, int|null>> Statistics array  | 
                                                        |
| 171 | - */  | 
                                                        |
| 172 | - public function statisticsByGenerations(): array  | 
                                                        |
| 173 | -    { | 
                                                        |
| 174 | - $stats_by_gen = $this->statisticsByGenerationBasicData();  | 
                                                        |
| 175 | - $cumul_stats_by_gen = $this->statisticsByGenerationCumulativeData();  | 
                                                        |
| 176 | -  | 
                                                        |
| 177 | - $statistics_by_gen = [];  | 
                                                        |
| 178 | -        foreach ($stats_by_gen as $gen => $stats_gen) { | 
                                                        |
| 179 | - $statistics_by_gen[(int) $stats_gen->gen] = array(  | 
                                                        |
| 180 | - 'sosaCount' => (int) $stats_gen->total_sosa,  | 
                                                        |
| 181 | - 'sosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_cumul,  | 
                                                        |
| 182 | - 'diffSosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_distinct_cumul,  | 
                                                        |
| 183 | - 'firstBirth' => $stats_gen->first_year,  | 
                                                        |
| 184 | - 'firstEstimatedBirth' => $stats_gen->first_est_year,  | 
                                                        |
| 185 | - 'lastBirth' => $stats_gen->last_year,  | 
                                                        |
| 186 | - 'lastEstimatedBirth' => $stats_gen->last_est_year  | 
                                                        |
| 187 | - );  | 
                                                        |
| 188 | - }  | 
                                                        |
| 189 | -  | 
                                                        |
| 190 | - return $statistics_by_gen;  | 
                                                        |
| 191 | - }  | 
                                                        |
| 192 | -  | 
                                                        |
| 193 | - /**  | 
                                                        |
| 194 | - * Returns the basic statistics data by generation.  | 
                                                        |
| 195 | - *  | 
                                                        |
| 196 | - * @return Collection<int, \stdClass>  | 
                                                        |
| 197 | - */  | 
                                                        |
| 198 | - private function statisticsByGenerationBasicData(): Collection  | 
                                                        |
| 199 | -    { | 
                                                        |
| 200 | -        return DB::table('maj_sosa') | 
                                                        |
| 201 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 202 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 203 | -            ->groupBy('majs_gen') | 
                                                        |
| 204 | -            ->orderBy('majs_gen', 'asc') | 
                                                        |
| 205 | -            ->select('majs_gen AS gen') | 
                                                        |
| 206 | -            ->selectRaw('COUNT(majs_sosa) AS total_sosa') | 
                                                        |
| 207 | -            ->selectRaw('MIN(majs_birth_year) AS first_year') | 
                                                        |
| 208 | -            ->selectRaw('MIN(majs_birth_year_est) AS first_est_year') | 
                                                        |
| 209 | -            ->selectRaw('MAX(majs_birth_year) AS last_year') | 
                                                        |
| 210 | -            ->selectRaw('MAX(majs_birth_year_est) AS last_est_year') | 
                                                        |
| 211 | -            ->get()->keyBy('gen'); | 
                                                        |
| 212 | - }  | 
                                                        |
| 213 | -  | 
                                                        |
| 214 | - /**  | 
                                                        |
| 215 | - * Returns the cumulative statistics data by generation  | 
                                                        |
| 216 | - *  | 
                                                        |
| 217 | - * @return Collection<int, \stdClass>  | 
                                                        |
| 218 | - */  | 
                                                        |
| 219 | - private function statisticsByGenerationCumulativeData(): Collection  | 
                                                        |
| 220 | -    { | 
                                                        |
| 221 | -        $list_gen = DB::table('maj_sosa')->select('majs_gen')->distinct() | 
                                                        |
| 222 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 223 | -            ->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 224 | -  | 
                                                        |
| 225 | -        return DB::table('maj_sosa') | 
                                                        |
| 226 | -            ->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 227 | -                $join->on('maj_sosa.majs_gen', '<=', 'list_gen.majs_gen') | 
                                                        |
| 228 | -                ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 229 | -                ->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 230 | - })  | 
                                                        |
| 231 | -            ->groupBy('list_gen.majs_gen') | 
                                                        |
| 232 | -            ->select('list_gen.majs_gen AS gen') | 
                                                        |
| 233 | -            ->selectRaw('COUNT(majs_i_id) AS total_cumul') | 
                                                        |
| 234 | -            ->selectRaw('COUNT(DISTINCT majs_i_id) AS total_distinct_cumul') | 
                                                        |
| 235 | -            ->selectRaw('1 - COUNT(DISTINCT majs_i_id) / COUNT(majs_i_id) AS pedi_collapse_simple') | 
                                                        |
| 236 | -            ->get()->keyBy('gen'); | 
                                                        |
| 237 | - }  | 
                                                        |
| 238 | -  | 
                                                        |
| 239 | - /**  | 
                                                        |
| 240 | - * Returns the pedigree collapse improved calculation by generation.  | 
                                                        |
| 241 | - *  | 
                                                        |
| 242 | - * Format:  | 
                                                        |
| 243 | - * - key : generation  | 
                                                        |
| 244 | - * - values:  | 
                                                        |
| 245 | - * - pedi_collapse_roots : pedigree collapse of ancestor roots for the generation  | 
                                                        |
| 246 | - * - pedi_collapse_xgen : pedigree cross-generation shrinkage for the generation  | 
                                                        |
| 247 | - *  | 
                                                        |
| 248 | - * @return array<int, array<string, float>>  | 
                                                        |
| 249 | - */  | 
                                                        |
| 250 | - public function pedigreeCollapseByGenerationData(): array  | 
                                                        |
| 251 | -    { | 
                                                        |
| 252 | -        if (!$this->isPdoSupported()) { | 
                                                        |
| 253 | - return [];  | 
                                                        |
| 254 | - }  | 
                                                        |
| 255 | -  | 
                                                        |
| 256 | - $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 257 | -  | 
                                                        |
| 258 | -        $list_gen = DB::table('maj_sosa')->select('majs_gen')->distinct() | 
                                                        |
| 259 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 260 | -            ->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 261 | -  | 
                                                        |
| 262 | - /* Compute the contributions of nodes of previous generations to the current generation */  | 
                                                        |
| 263 | -        $root_ancestors_contributions = DB::table('maj_sosa AS sosa') | 
                                                        |
| 264 | - ->select(['list_gen.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        |
| 265 | - ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        |
| 266 | - ->selectRaw(  | 
                                                        |
| 267 | - '(CASE ' .  | 
                                                        |
| 268 | - ' WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL' .  | 
                                                        |
| 269 | - ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 270 | - ' ELSE 0 ' .  | 
                                                        |
| 271 | - ' END)' .  | 
                                                        |
| 272 | - ' + (CASE ' .  | 
                                                        |
| 273 | - ' WHEN ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL' .  | 
                                                        |
| 274 | - ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 275 | - ' ELSE 0 ' .  | 
                                                        |
| 276 | - ' END) contrib'  | 
                                                        |
| 277 | - )  | 
                                                        |
| 278 | -            ->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 279 | -                $join->on('sosa.majs_gen', '<', 'list_gen.majs_gen') | 
                                                        |
| 280 | -                    ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 281 | -                    ->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 282 | - })  | 
                                                        |
| 283 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 284 | - // Link to sosa's father  | 
                                                        |
| 285 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 286 | -                    ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 287 | -                    ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 288 | - })  | 
                                                        |
| 289 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 290 | - // Link to sosa's mother  | 
                                                        |
| 291 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 292 | -                    ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 293 | -                    ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 294 | - })  | 
                                                        |
| 295 | -            ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 296 | -            ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 297 | -            ->where(function (Builder $query): void { | 
                                                        |
| 298 | -                $query->whereNull('sosa_fat.majs_i_id') | 
                                                        |
| 299 | -                ->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        |
| 300 | - });  | 
                                                        |
| 301 | -  | 
                                                        |
| 302 | - /* Identify nodes in the generations with ancestors who are also in the same generation.  | 
                                                        |
| 32 | + private UserInterface $user;  | 
                                                        |
| 33 | + private Tree $tree;  | 
                                                        |
| 34 | +  | 
                                                        |
| 35 | + /**  | 
                                                        |
| 36 | + * Constructor for Sosa Statistics Service  | 
                                                        |
| 37 | + *  | 
                                                        |
| 38 | + * @param Tree $tree  | 
                                                        |
| 39 | + * @param UserInterface $user  | 
                                                        |
| 40 | + */  | 
                                                        |
| 41 | + public function __construct(Tree $tree, UserInterface $user)  | 
                                                        |
| 42 | +	{ | 
                                                        |
| 43 | + $this->tree = $tree;  | 
                                                        |
| 44 | + $this->user = $user;  | 
                                                        |
| 45 | + }  | 
                                                        |
| 46 | +  | 
                                                        |
| 47 | + /**  | 
                                                        |
| 48 | + * Check if PDO support the queries used in Sosa statistics.  | 
                                                        |
| 49 | + *  | 
                                                        |
| 50 | + * SQLite does not support RIGHT and FULL JOIN, and POWER/SQRT require a specific compilation flag.  | 
                                                        |
| 51 | + *  | 
                                                        |
| 52 | + * @return bool  | 
                                                        |
| 53 | + */  | 
                                                        |
| 54 | + public function isPdoSupported(): bool  | 
                                                        |
| 55 | +	{ | 
                                                        |
| 56 | + return DB::connection()->getDriverName() !== 'sqlite';  | 
                                                        |
| 57 | + }  | 
                                                        |
| 58 | +  | 
                                                        |
| 59 | + /**  | 
                                                        |
| 60 | + * Return the root individual for the reference tree and user.  | 
                                                        |
| 61 | + *  | 
                                                        |
| 62 | + * @return Individual|NULL  | 
                                                        |
| 63 | + */  | 
                                                        |
| 64 | + public function rootIndividual(): ?Individual  | 
                                                        |
| 65 | +	{ | 
                                                        |
| 66 | + $root_indi_id = $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID');  | 
                                                        |
| 67 | + return Registry::individualFactory()->make($root_indi_id, $this->tree);  | 
                                                        |
| 68 | + }  | 
                                                        |
| 69 | +  | 
                                                        |
| 70 | + /**  | 
                                                        |
| 71 | + * Get the highest generation for the reference tree and user.  | 
                                                        |
| 72 | + *  | 
                                                        |
| 73 | + * @return int  | 
                                                        |
| 74 | + */  | 
                                                        |
| 75 | + public function maxGeneration(): int  | 
                                                        |
| 76 | +	{ | 
                                                        |
| 77 | +		return (int) DB::table('maj_sosa') | 
                                                        |
| 78 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 79 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 80 | +			->max('majs_gen'); | 
                                                        |
| 81 | + }  | 
                                                        |
| 82 | +  | 
                                                        |
| 83 | + /**  | 
                                                        |
| 84 | + * Get the total count of individuals in the tree.  | 
                                                        |
| 85 | + *  | 
                                                        |
| 86 | + * @return int  | 
                                                        |
| 87 | + */  | 
                                                        |
| 88 | + public function totalIndividuals(): int  | 
                                                        |
| 89 | +	{ | 
                                                        |
| 90 | +		return DB::table('individuals') | 
                                                        |
| 91 | +			->where('i_file', '=', $this->tree->id()) | 
                                                        |
| 92 | + ->count();  | 
                                                        |
| 93 | + }  | 
                                                        |
| 94 | +  | 
                                                        |
| 95 | + /**  | 
                                                        |
| 96 | + * Get the total count of Sosa ancestors for all generations  | 
                                                        |
| 97 | + *  | 
                                                        |
| 98 | + * @return int  | 
                                                        |
| 99 | + */  | 
                                                        |
| 100 | + public function totalAncestors(): int  | 
                                                        |
| 101 | +	{ | 
                                                        |
| 102 | +		return DB::table('maj_sosa') | 
                                                        |
| 103 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 104 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 105 | + ->count();  | 
                                                        |
| 106 | + }  | 
                                                        |
| 107 | +  | 
                                                        |
| 108 | + /**  | 
                                                        |
| 109 | + * Get the total count of Sosa ancestors for a generation  | 
                                                        |
| 110 | + *  | 
                                                        |
| 111 | + * @return int  | 
                                                        |
| 112 | + */  | 
                                                        |
| 113 | + public function totalAncestorsAtGeneration(int $gen): int  | 
                                                        |
| 114 | +	{ | 
                                                        |
| 115 | +		return DB::table('maj_sosa') | 
                                                        |
| 116 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 117 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 118 | +			->where('majs_gen', '=', $gen) | 
                                                        |
| 119 | + ->count();  | 
                                                        |
| 120 | + }  | 
                                                        |
| 121 | +  | 
                                                        |
| 122 | + /**  | 
                                                        |
| 123 | + * Get the total count of distinct Sosa ancestors for all generations  | 
                                                        |
| 124 | + *  | 
                                                        |
| 125 | + * @return int  | 
                                                        |
| 126 | + */  | 
                                                        |
| 127 | + public function totalDistinctAncestors(): int  | 
                                                        |
| 128 | +	{ | 
                                                        |
| 129 | +		return DB::table('maj_sosa') | 
                                                        |
| 130 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 131 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 132 | + ->distinct()  | 
                                                        |
| 133 | +			->count('majs_i_id'); | 
                                                        |
| 134 | + }  | 
                                                        |
| 135 | +  | 
                                                        |
| 136 | + /**  | 
                                                        |
| 137 | + * Get the mean generation time, as the slope of the linear regression of birth years vs generations  | 
                                                        |
| 138 | + *  | 
                                                        |
| 139 | + * @return float  | 
                                                        |
| 140 | + */  | 
                                                        |
| 141 | + public function meanGenerationTime(): float  | 
                                                        |
| 142 | +	{ | 
                                                        |
| 143 | +		$row = DB::table('maj_sosa') | 
                                                        |
| 144 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 145 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 146 | +			->whereNotNull('majs_birth_year') | 
                                                        |
| 147 | +			->selectRaw('COUNT(majs_sosa) AS n') | 
                                                        |
| 148 | +			->selectRaw('SUM(majs_gen * majs_birth_year) AS sum_xy') | 
                                                        |
| 149 | +			->selectRaw('SUM(majs_gen) AS sum_x') | 
                                                        |
| 150 | +			->selectRaw('SUM(majs_birth_year) AS sum_y') | 
                                                        |
| 151 | +			->selectRaw('SUM(majs_gen * majs_gen) AS sum_x2') | 
                                                        |
| 152 | + ->get()->first();  | 
                                                        |
| 153 | +  | 
                                                        |
| 154 | + return $row->n == 0 ? 0 :  | 
                                                        |
| 155 | + -($row->n * $row->sum_xy - $row->sum_x * $row->sum_y) / ($row->n * $row->sum_x2 - pow($row->sum_x, 2));  | 
                                                        |
| 156 | + }  | 
                                                        |
| 157 | +  | 
                                                        |
| 158 | + /**  | 
                                                        |
| 159 | + * Get the statistic array detailed by generation.  | 
                                                        |
| 160 | + * Statistics for each generation are:  | 
                                                        |
| 161 | + * - The number of Sosa in generation  | 
                                                        |
| 162 | + * - The number of Sosa up to generation  | 
                                                        |
| 163 | + * - The number of distinct Sosa up to generation  | 
                                                        |
| 164 | + * - The year of the first birth in generation  | 
                                                        |
| 165 | + * - The year of the first estimated birth in generation  | 
                                                        |
| 166 | + * - The year of the last birth in generation  | 
                                                        |
| 167 | + * - The year of the last estimated birth in generation  | 
                                                        |
| 168 | + * - The average year of birth in generation  | 
                                                        |
| 169 | + *  | 
                                                        |
| 170 | + * @return array<int, array<string, int|null>> Statistics array  | 
                                                        |
| 171 | + */  | 
                                                        |
| 172 | + public function statisticsByGenerations(): array  | 
                                                        |
| 173 | +	{ | 
                                                        |
| 174 | + $stats_by_gen = $this->statisticsByGenerationBasicData();  | 
                                                        |
| 175 | + $cumul_stats_by_gen = $this->statisticsByGenerationCumulativeData();  | 
                                                        |
| 176 | +  | 
                                                        |
| 177 | + $statistics_by_gen = [];  | 
                                                        |
| 178 | +		foreach ($stats_by_gen as $gen => $stats_gen) { | 
                                                        |
| 179 | + $statistics_by_gen[(int) $stats_gen->gen] = array(  | 
                                                        |
| 180 | + 'sosaCount' => (int) $stats_gen->total_sosa,  | 
                                                        |
| 181 | + 'sosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_cumul,  | 
                                                        |
| 182 | + 'diffSosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_distinct_cumul,  | 
                                                        |
| 183 | + 'firstBirth' => $stats_gen->first_year,  | 
                                                        |
| 184 | + 'firstEstimatedBirth' => $stats_gen->first_est_year,  | 
                                                        |
| 185 | + 'lastBirth' => $stats_gen->last_year,  | 
                                                        |
| 186 | + 'lastEstimatedBirth' => $stats_gen->last_est_year  | 
                                                        |
| 187 | + );  | 
                                                        |
| 188 | + }  | 
                                                        |
| 189 | +  | 
                                                        |
| 190 | + return $statistics_by_gen;  | 
                                                        |
| 191 | + }  | 
                                                        |
| 192 | +  | 
                                                        |
| 193 | + /**  | 
                                                        |
| 194 | + * Returns the basic statistics data by generation.  | 
                                                        |
| 195 | + *  | 
                                                        |
| 196 | + * @return Collection<int, \stdClass>  | 
                                                        |
| 197 | + */  | 
                                                        |
| 198 | + private function statisticsByGenerationBasicData(): Collection  | 
                                                        |
| 199 | +	{ | 
                                                        |
| 200 | +		return DB::table('maj_sosa') | 
                                                        |
| 201 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 202 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 203 | +			->groupBy('majs_gen') | 
                                                        |
| 204 | +			->orderBy('majs_gen', 'asc') | 
                                                        |
| 205 | +			->select('majs_gen AS gen') | 
                                                        |
| 206 | +			->selectRaw('COUNT(majs_sosa) AS total_sosa') | 
                                                        |
| 207 | +			->selectRaw('MIN(majs_birth_year) AS first_year') | 
                                                        |
| 208 | +			->selectRaw('MIN(majs_birth_year_est) AS first_est_year') | 
                                                        |
| 209 | +			->selectRaw('MAX(majs_birth_year) AS last_year') | 
                                                        |
| 210 | +			->selectRaw('MAX(majs_birth_year_est) AS last_est_year') | 
                                                        |
| 211 | +			->get()->keyBy('gen'); | 
                                                        |
| 212 | + }  | 
                                                        |
| 213 | +  | 
                                                        |
| 214 | + /**  | 
                                                        |
| 215 | + * Returns the cumulative statistics data by generation  | 
                                                        |
| 216 | + *  | 
                                                        |
| 217 | + * @return Collection<int, \stdClass>  | 
                                                        |
| 218 | + */  | 
                                                        |
| 219 | + private function statisticsByGenerationCumulativeData(): Collection  | 
                                                        |
| 220 | +	{ | 
                                                        |
| 221 | +		$list_gen = DB::table('maj_sosa')->select('majs_gen')->distinct() | 
                                                        |
| 222 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 223 | +			->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 224 | +  | 
                                                        |
| 225 | +		return DB::table('maj_sosa') | 
                                                        |
| 226 | +			->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 227 | +				$join->on('maj_sosa.majs_gen', '<=', 'list_gen.majs_gen') | 
                                                        |
| 228 | +				->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 229 | +				->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 230 | + })  | 
                                                        |
| 231 | +			->groupBy('list_gen.majs_gen') | 
                                                        |
| 232 | +			->select('list_gen.majs_gen AS gen') | 
                                                        |
| 233 | +			->selectRaw('COUNT(majs_i_id) AS total_cumul') | 
                                                        |
| 234 | +			->selectRaw('COUNT(DISTINCT majs_i_id) AS total_distinct_cumul') | 
                                                        |
| 235 | +			->selectRaw('1 - COUNT(DISTINCT majs_i_id) / COUNT(majs_i_id) AS pedi_collapse_simple') | 
                                                        |
| 236 | +			->get()->keyBy('gen'); | 
                                                        |
| 237 | + }  | 
                                                        |
| 238 | +  | 
                                                        |
| 239 | + /**  | 
                                                        |
| 240 | + * Returns the pedigree collapse improved calculation by generation.  | 
                                                        |
| 241 | + *  | 
                                                        |
| 242 | + * Format:  | 
                                                        |
| 243 | + * - key : generation  | 
                                                        |
| 244 | + * - values:  | 
                                                        |
| 245 | + * - pedi_collapse_roots : pedigree collapse of ancestor roots for the generation  | 
                                                        |
| 246 | + * - pedi_collapse_xgen : pedigree cross-generation shrinkage for the generation  | 
                                                        |
| 247 | + *  | 
                                                        |
| 248 | + * @return array<int, array<string, float>>  | 
                                                        |
| 249 | + */  | 
                                                        |
| 250 | + public function pedigreeCollapseByGenerationData(): array  | 
                                                        |
| 251 | +	{ | 
                                                        |
| 252 | +		if (!$this->isPdoSupported()) { | 
                                                        |
| 253 | + return [];  | 
                                                        |
| 254 | + }  | 
                                                        |
| 255 | +  | 
                                                        |
| 256 | + $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 257 | +  | 
                                                        |
| 258 | +		$list_gen = DB::table('maj_sosa')->select('majs_gen')->distinct() | 
                                                        |
| 259 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 260 | +			->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 261 | +  | 
                                                        |
| 262 | + /* Compute the contributions of nodes of previous generations to the current generation */  | 
                                                        |
| 263 | +		$root_ancestors_contributions = DB::table('maj_sosa AS sosa') | 
                                                        |
| 264 | + ->select(['list_gen.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        |
| 265 | + ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        |
| 266 | + ->selectRaw(  | 
                                                        |
| 267 | + '(CASE ' .  | 
                                                        |
| 268 | + ' WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL' .  | 
                                                        |
| 269 | + ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 270 | + ' ELSE 0 ' .  | 
                                                        |
| 271 | + ' END)' .  | 
                                                        |
| 272 | + ' + (CASE ' .  | 
                                                        |
| 273 | + ' WHEN ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL' .  | 
                                                        |
| 274 | + ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 275 | + ' ELSE 0 ' .  | 
                                                        |
| 276 | + ' END) contrib'  | 
                                                        |
| 277 | + )  | 
                                                        |
| 278 | +			->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 279 | +				$join->on('sosa.majs_gen', '<', 'list_gen.majs_gen') | 
                                                        |
| 280 | +					->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 281 | +					->where('majs_user_id', '=', $this->user->id()); | 
                                                        |
| 282 | + })  | 
                                                        |
| 283 | +			->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 284 | + // Link to sosa's father  | 
                                                        |
| 285 | + $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 286 | +					->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 287 | +					->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 288 | + })  | 
                                                        |
| 289 | +			->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 290 | + // Link to sosa's mother  | 
                                                        |
| 291 | + $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 292 | +					->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 293 | +					->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 294 | + })  | 
                                                        |
| 295 | +			->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 296 | +			->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 297 | +			->where(function (Builder $query): void { | 
                                                        |
| 298 | +				$query->whereNull('sosa_fat.majs_i_id') | 
                                                        |
| 299 | +				->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        |
| 300 | + });  | 
                                                        |
| 301 | +  | 
                                                        |
| 302 | + /* Identify nodes in the generations with ancestors who are also in the same generation.  | 
                                                        |
| 303 | 303 | * This is the vertical/generational collapse that will reduce the number or roots.  | 
                                                        
| 304 | 304 | */  | 
                                                        
| 305 | -        $non_roots_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        |
| 306 | - ->select(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id', 'sosa.majs_sosa'])  | 
                                                        |
| 307 | -            ->selectRaw('MAX(' . $table_prefix . 'sosa_anc.majs_sosa) - MIN(' . $table_prefix . 'sosa_anc.majs_sosa)' . | 
                                                        |
| 308 | - ' AS full_ancestors')  | 
                                                        |
| 309 | -            ->join('maj_sosa AS sosa_anc', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 310 | -                $join->on('sosa.majs_gen', '<', 'sosa_anc.majs_gen') | 
                                                        |
| 311 | -                    ->whereRaw('FLOOR(' . $table_prefix . 'sosa_anc.majs_sosa / POWER(2, ' . | 
                                                        |
| 312 | - $table_prefix . 'sosa_anc.majs_gen - ' . $table_prefix . 'sosa.majs_gen)) = ' .  | 
                                                        |
| 313 | - $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 314 | -                    ->where('sosa_anc.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 315 | -                    ->where('sosa_anc.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 316 | - })  | 
                                                        |
| 317 | -            ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 318 | -            ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 319 | -            ->whereIn('sosa_anc.majs_i_id', function (Builder $query) use ($table_prefix): void { | 
                                                        |
| 320 | -                $query->from('maj_sosa AS sosa_gen') | 
                                                        |
| 321 | -                ->select('sosa_gen.majs_i_id')->distinct() | 
                                                        |
| 322 | -                ->where('sosa_gen.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 323 | -                ->where('sosa_gen.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 324 | - ->whereRaw($table_prefix . 'sosa_gen.majs_gen = ' . $table_prefix . 'sosa.majs_gen');  | 
                                                        |
| 325 | - })  | 
                                                        |
| 326 | - ->groupBy(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id',  | 
                                                        |
| 327 | - 'sosa.majs_sosa', 'sosa.majs_i_id']);  | 
                                                        |
| 328 | -  | 
                                                        |
| 329 | - /* Compute the contribution of the nodes in the generation,  | 
                                                        |
| 305 | +		$non_roots_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        |
| 306 | + ->select(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id', 'sosa.majs_sosa'])  | 
                                                        |
| 307 | +			->selectRaw('MAX(' . $table_prefix . 'sosa_anc.majs_sosa) - MIN(' . $table_prefix . 'sosa_anc.majs_sosa)' . | 
                                                        |
| 308 | + ' AS full_ancestors')  | 
                                                        |
| 309 | +			->join('maj_sosa AS sosa_anc', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 310 | +				$join->on('sosa.majs_gen', '<', 'sosa_anc.majs_gen') | 
                                                        |
| 311 | +					->whereRaw('FLOOR(' . $table_prefix . 'sosa_anc.majs_sosa / POWER(2, ' . | 
                                                        |
| 312 | + $table_prefix . 'sosa_anc.majs_gen - ' . $table_prefix . 'sosa.majs_gen)) = ' .  | 
                                                        |
| 313 | + $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 314 | +					->where('sosa_anc.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 315 | +					->where('sosa_anc.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 316 | + })  | 
                                                        |
| 317 | +			->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 318 | +			->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 319 | +			->whereIn('sosa_anc.majs_i_id', function (Builder $query) use ($table_prefix): void { | 
                                                        |
| 320 | +				$query->from('maj_sosa AS sosa_gen') | 
                                                        |
| 321 | +				->select('sosa_gen.majs_i_id')->distinct() | 
                                                        |
| 322 | +				->where('sosa_gen.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 323 | +				->where('sosa_gen.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 324 | + ->whereRaw($table_prefix . 'sosa_gen.majs_gen = ' . $table_prefix . 'sosa.majs_gen');  | 
                                                        |
| 325 | + })  | 
                                                        |
| 326 | + ->groupBy(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id',  | 
                                                        |
| 327 | + 'sosa.majs_sosa', 'sosa.majs_i_id']);  | 
                                                        |
| 328 | +  | 
                                                        |
| 329 | + /* Compute the contribution of the nodes in the generation,  | 
                                                        |
| 330 | 330 | * excluding the nodes with ancestors in the same generation.  | 
                                                        
| 331 | 331 | * Nodes with a parent missing are not excluded to cater for the missing one.  | 
                                                        
| 332 | 332 | */  | 
                                                        
| 333 | -        $known_ancestors_contributions = DB::table('maj_sosa AS sosa') | 
                                                        |
| 334 | - ->select(['sosa.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        |
| 335 | - ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        |
| 336 | -            ->selectRaw('1 AS contrib') | 
                                                        |
| 337 | -            ->leftJoinSub($non_roots_ancestors, 'nonroot', function (JoinClause $join): void { | 
                                                        |
| 338 | -                $join->on('sosa.majs_gen', '=', 'nonroot.majs_gen') | 
                                                        |
| 339 | -                    ->on('sosa.majs_sosa', '=', 'nonroot.majs_sosa') | 
                                                        |
| 340 | -                    ->where('nonroot.full_ancestors', '>', 0) | 
                                                        |
| 341 | -                    ->where('nonroot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 342 | -                    ->where('nonroot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 343 | - })  | 
                                                        |
| 344 | -            ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 345 | -            ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 346 | -            ->whereNull('nonroot.majs_sosa'); | 
                                                        |
| 347 | -  | 
                                                        |
| 348 | - /* Aggregate both queries, and calculate the sum of contributions by generation roots.  | 
                                                        |
| 333 | +		$known_ancestors_contributions = DB::table('maj_sosa AS sosa') | 
                                                        |
| 334 | + ->select(['sosa.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        |
| 335 | + ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        |
| 336 | +			->selectRaw('1 AS contrib') | 
                                                        |
| 337 | +			->leftJoinSub($non_roots_ancestors, 'nonroot', function (JoinClause $join): void { | 
                                                        |
| 338 | +				$join->on('sosa.majs_gen', '=', 'nonroot.majs_gen') | 
                                                        |
| 339 | +					->on('sosa.majs_sosa', '=', 'nonroot.majs_sosa') | 
                                                        |
| 340 | +					->where('nonroot.full_ancestors', '>', 0) | 
                                                        |
| 341 | +					->where('nonroot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 342 | +					->where('nonroot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 343 | + })  | 
                                                        |
| 344 | +			->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 345 | +			->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 346 | +			->whereNull('nonroot.majs_sosa'); | 
                                                        |
| 347 | +  | 
                                                        |
| 348 | + /* Aggregate both queries, and calculate the sum of contributions by generation roots.  | 
                                                        |
| 349 | 349 | * Exclude as well nodes that already appear in lower generations, as their branche has already been reduced.  | 
                                                        
| 350 | 350 | */  | 
                                                        
| 351 | - $ancestors_contributions_sum = DB::connection()->query()  | 
                                                        |
| 352 | - ->fromSub($root_ancestors_contributions->unionAll($known_ancestors_contributions), 'sosa_contribs')  | 
                                                        |
| 353 | - ->select(['sosa_contribs.gen', 'sosa_contribs.majs_gedcom_id', 'sosa_contribs.majs_user_id'])  | 
                                                        |
| 354 | - ->addSelect(['sosa_contribs.majs_i_id', 'sosa_contribs.contrib'])  | 
                                                        |
| 355 | -            ->selectRaw('COUNT(' . $table_prefix . 'sosa_contribs.majs_i_id) * ' . | 
                                                        |
| 356 | - $table_prefix . 'sosa_contribs.contrib AS totalContrib')  | 
                                                        |
| 357 | -            ->leftJoin('maj_sosa AS sosa_low', function (JoinClause $join): void { | 
                                                        |
| 358 | -                $join->on('sosa_low.majs_gen', '<', 'sosa_contribs.majs_gen') | 
                                                        |
| 359 | -                    ->on('sosa_low.majs_i_id', '=', 'sosa_contribs.majs_i_id') | 
                                                        |
| 360 | -                    ->where('sosa_low.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 361 | -                    ->where('sosa_low.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 362 | - })  | 
                                                        |
| 363 | -            ->whereNull('sosa_low.majs_sosa') | 
                                                        |
| 364 | - ->groupBy(['sosa_contribs.gen', 'sosa_contribs.majs_gedcom_id', 'sosa_contribs.majs_user_id',  | 
                                                        |
| 365 | - 'sosa_contribs.majs_i_id', 'sosa_contribs.contrib']);  | 
                                                        |
| 366 | -  | 
                                                        |
| 367 | - // Aggregate all generation roots to compute root and generation pedigree collapse  | 
                                                        |
| 368 | - $pedi_collapse_coll = DB::connection()->query()->fromSub($ancestors_contributions_sum, 'sosa_contribs_sum')  | 
                                                        |
| 369 | -            ->select(['gen'])->selectRaw('SUM(contrib), SUM(totalContrib)') | 
                                                        |
| 370 | -            ->selectRaw('1 - SUM(contrib) / SUM(totalContrib) AS pedi_collapse_roots')  // Roots/horizontal collapse | 
                                                        |
| 371 | -            ->selectRaw('1 - SUM(totalContrib) / POWER ( 2, gen - 1) AS pedi_collapse_xgen') // Crossgeneration collapse | 
                                                        |
| 372 | - ->groupBy(['gen', 'majs_gedcom_id', 'majs_user_id'])  | 
                                                        |
| 373 | -            ->orderBy('gen') | 
                                                        |
| 374 | - ->get();  | 
                                                        |
| 375 | -  | 
                                                        |
| 376 | - $pedi_collapse_by_gen = [];  | 
                                                        |
| 377 | -        foreach ($pedi_collapse_coll as $collapse_gen) { | 
                                                        |
| 378 | - $pedi_collapse_by_gen[(int) $collapse_gen->gen] = array(  | 
                                                        |
| 379 | - 'pedi_collapse_roots' => (float) $collapse_gen->pedi_collapse_roots,  | 
                                                        |
| 380 | - 'pedi_collapse_xgen' => (float) $collapse_gen->pedi_collapse_xgen  | 
                                                        |
| 381 | - );  | 
                                                        |
| 382 | - }  | 
                                                        |
| 383 | - return $pedi_collapse_by_gen;  | 
                                                        |
| 384 | - }  | 
                                                        |
| 385 | -  | 
                                                        |
| 386 | - /**  | 
                                                        |
| 387 | - * Return a Collection of the mean generation depth and deviation for all Sosa ancestors at a given generation.  | 
                                                        |
| 388 | - * Sosa 1 is of generation 1.  | 
                                                        |
| 389 | - *  | 
                                                        |
| 390 | - * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes,  | 
                                                        |
| 391 | - * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140  | 
                                                        |
| 392 | - * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0  | 
                                                        |
| 393 | - *  | 
                                                        |
| 394 | - * Format:  | 
                                                        |
| 395 | - * - key : sosa number of the ancestor  | 
                                                        |
| 396 | - * - values:  | 
                                                        |
| 397 | - * - root_ancestor_id : ID of the ancestor  | 
                                                        |
| 398 | - * - mean_gen_depth : Mean generation depth  | 
                                                        |
| 399 | - * - stddev_gen_depth : Standard deviation of generation depth  | 
                                                        |
| 400 | - *  | 
                                                        |
| 401 | - * @param int $gen Sosa generation  | 
                                                        |
| 402 | - * @return Collection<int, \stdClass>  | 
                                                        |
| 403 | - */  | 
                                                        |
| 404 | - public function generationDepthStatsAtGeneration(int $gen): Collection  | 
                                                        |
| 405 | -    { | 
                                                        |
| 406 | -        if (!$this->isPdoSupported()) { | 
                                                        |
| 407 | - return collect();  | 
                                                        |
| 408 | - }  | 
                                                        |
| 409 | -  | 
                                                        |
| 410 | - $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 411 | -        $missing_ancestors_by_gen = DB::table('maj_sosa AS sosa') | 
                                                        |
| 412 | - ->selectRaw($table_prefix . 'sosa.majs_gen - ? AS majs_gen_norm', [$gen])  | 
                                                        |
| 413 | -            ->selectRaw('FLOOR(((' . $table_prefix . 'sosa.majs_sosa / POW(2, ' . $table_prefix . 'sosa.majs_gen -1 )) - 1) * POWER(2, ? - 1)) + POWER(2, ? - 1) AS root_ancestor', [$gen, $gen])   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 414 | -            ->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 415 | -            ->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 416 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 417 | - // Link to sosa's father  | 
                                                        |
| 418 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 419 | -                ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 420 | -                ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 421 | - })  | 
                                                        |
| 422 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 423 | - // Link to sosa's mother  | 
                                                        |
| 424 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 425 | -                ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 426 | -                ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 427 | - })  | 
                                                        |
| 428 | -            ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 429 | -            ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 430 | -            ->where('sosa.majs_gen', '>=', $gen) | 
                                                        |
| 431 | -            ->where(function (Builder $query): void { | 
                                                        |
| 432 | -                $query->whereNull('sosa_fat.majs_i_id') | 
                                                        |
| 433 | -                    ->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        |
| 434 | - })  | 
                                                        |
| 435 | - ->groupBy(['sosa.majs_gen', 'root_ancestor']);  | 
                                                        |
| 436 | -  | 
                                                        |
| 437 | -        return DB::table('maj_sosa AS sosa_list') | 
                                                        |
| 438 | - ->select(['stats_by_gen.root_ancestor AS root_ancestor_sosa', 'sosa_list.majs_i_id as root_ancestor_id'])  | 
                                                        |
| 439 | -            ->selectRaw('1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 440 | -            ->selectRaw(' SQRT(' . | 
                                                        |
| 441 | - ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 442 | - ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 443 | - ' ) AS stddev_gen_depth')  | 
                                                        |
| 444 | -            ->joinSub($missing_ancestors_by_gen, 'stats_by_gen', function (JoinClause $join): void { | 
                                                        |
| 445 | -                $join->on('sosa_list.majs_sosa', '=', 'stats_by_gen.root_ancestor') | 
                                                        |
| 446 | -                    ->where('sosa_list.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 447 | -                    ->where('sosa_list.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 448 | - })  | 
                                                        |
| 449 | - ->groupBy(['stats_by_gen.root_ancestor', 'sosa_list.majs_i_id'])  | 
                                                        |
| 450 | -            ->orderBy('stats_by_gen.root_ancestor') | 
                                                        |
| 451 | -            ->get()->keyBy('root_ancestor_sosa'); | 
                                                        |
| 452 | - }  | 
                                                        |
| 453 | -  | 
                                                        |
| 454 | - /**  | 
                                                        |
| 455 | - * Return a collection of the most duplicated root Sosa ancestors.  | 
                                                        |
| 456 | - * The number of ancestors to return is limited by the parameter $limit.  | 
                                                        |
| 457 | - * If several individuals are tied when reaching the limit, none of them are returned,  | 
                                                        |
| 458 | - * which means that there can be less individuals returned than requested.  | 
                                                        |
| 459 | - *  | 
                                                        |
| 460 | - * Format:  | 
                                                        |
| 461 | - * - value:  | 
                                                        |
| 462 | - * - sosa_i_id : sosa individual  | 
                                                        |
| 463 | - * - sosa_count: number of duplications of the ancestor (e.g. 3 if it appears 3 times)  | 
                                                        |
| 464 | - *  | 
                                                        |
| 465 | - * @param int $limit  | 
                                                        |
| 466 | - * @return Collection<\stdClass>  | 
                                                        |
| 467 | - */  | 
                                                        |
| 468 | - public function topMultipleAncestorsWithNoTies(int $limit): Collection  | 
                                                        |
| 469 | -    { | 
                                                        |
| 470 | - $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 471 | -        $multiple_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        |
| 472 | -            ->select('sosa.majs_i_id AS sosa_i_id') | 
                                                        |
| 473 | -            ->selectRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) AS sosa_count') | 
                                                        |
| 474 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 475 | - // Link to sosa's father  | 
                                                        |
| 476 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 477 | -                    ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 478 | -                    ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 479 | - })  | 
                                                        |
| 480 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 481 | - // Link to sosa's mother  | 
                                                        |
| 482 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 483 | -                ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 484 | -                ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 485 | - })  | 
                                                        |
| 486 | -            ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 487 | -            ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 488 | -            ->whereNull('sosa_fat.majs_sosa')   // We keep only root individuals, i.e. those with no father or mother | 
                                                        |
| 489 | -            ->whereNull('sosa_mot.majs_sosa') | 
                                                        |
| 490 | -            ->groupBy('sosa.majs_i_id') | 
                                                        |
| 491 | -            ->havingRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) > 1')    // Limit to the duplicate sosas. | 
                                                        |
| 492 | -            ->orderByRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) DESC, MIN(' . $table_prefix . 'sosa.majs_sosa) ASC')   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 493 | - ->limit($limit + 1) // We want to select one more than required, for ties  | 
                                                        |
| 494 | - ->get();  | 
                                                        |
| 495 | -  | 
                                                        |
| 496 | -        if ($multiple_ancestors->count() > $limit) { | 
                                                        |
| 497 | - $last_count = $multiple_ancestors->last()->sosa_count;  | 
                                                        |
| 498 | - $multiple_ancestors = $multiple_ancestors->reject(  | 
                                                        |
| 499 | - fn (stdClass $element): bool => $element->sosa_count === $last_count  | 
                                                        |
| 500 | - );  | 
                                                        |
| 501 | - }  | 
                                                        |
| 502 | - return $multiple_ancestors;  | 
                                                        |
| 503 | - }  | 
                                                        |
| 504 | -  | 
                                                        |
| 505 | - /**  | 
                                                        |
| 506 | - * Return a computed array of statistics about the dispersion of ancestors across the ancestors  | 
                                                        |
| 507 | - * at a specified generation.  | 
                                                        |
| 508 | - *  | 
                                                        |
| 509 | - * Format:  | 
                                                        |
| 510 | - * - key : rank of the ancestor in generation G for which exclusive ancestors have been found  | 
                                                        |
| 511 | - * For instance 3 represent the maternal grand father  | 
                                                        |
| 512 | - * 0 is used for shared ancestors  | 
                                                        |
| 513 | - * - values:  | 
                                                        |
| 514 | - * - branches: same as key  | 
                                                        |
| 515 | - * - majs_i_id: xref of the ancestor at rank key in generation G, or null for shared ancestors  | 
                                                        |
| 516 | - * - count_indi: number of ancestors exclusively in the ancestors of the ancestor at rank key  | 
                                                        |
| 517 | - *  | 
                                                        |
| 518 | - * For instance a result at generation 3 could be :  | 
                                                        |
| 519 | - * [  | 
                                                        |
| 520 | -     *  0 => { branches: 0, majs_i_id: X1, count_indi: 12 } -> 12 ancestors are shared by the grand-parents | 
                                                        |
| 521 | -     *  1 => { branches: 1, majs_i_id: X2, count_indi: 32 } -> 32 ancestors are exclusive to the paternal grand-father | 
                                                        |
| 522 | -     *  2 => { branches: 2, majs_i_id: X3, count_indi: 25 } -> 25 ancestors are exclusive to the paternal grand-mother | 
                                                        |
| 523 | -     *  3 => { branches: 3, majs_i_id: X4, count_indi: 12 } -> 12 ancestors are exclusive to the maternal grand-father | 
                                                        |
| 524 | -     *  4 => { branches: 4, majs_i_id: X5, count_indi: 30 } -> 30 ancestors are exclusive to the maternal grand-mother | 
                                                        |
| 525 | - * ]  | 
                                                        |
| 526 | - *  | 
                                                        |
| 527 | - * @param int $gen  | 
                                                        |
| 528 | - * @return Collection<int, \stdClass>  | 
                                                        |
| 529 | - */  | 
                                                        |
| 530 | - public function ancestorsDispersionForGeneration(int $gen): Collection  | 
                                                        |
| 531 | -    { | 
                                                        |
| 532 | -        if (!$this->isPdoSupported()) { | 
                                                        |
| 533 | - return collect();  | 
                                                        |
| 534 | - }  | 
                                                        |
| 535 | -  | 
                                                        |
| 536 | -        $ancestors_branches = DB::table('maj_sosa') | 
                                                        |
| 537 | -            ->select('majs_i_id AS i_id') | 
                                                        |
| 538 | -            ->selectRaw('FLOOR(majs_sosa / POW(2, (majs_gen - ?))) - POW(2, ? -1) + 1 AS branch', [$gen, $gen]) | 
                                                        |
| 539 | -            ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 540 | -            ->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 541 | -            ->where('majs_gen', '>=', $gen) | 
                                                        |
| 542 | -            ->groupBy('majs_i_id', 'branch'); | 
                                                        |
| 543 | -  | 
                                                        |
| 544 | -        $consolidated_ancestors_branches = DB::table('maj_sosa') | 
                                                        |
| 545 | - ->fromSub($ancestors_branches, 'indi_branch')  | 
                                                        |
| 546 | -            ->select('i_id') | 
                                                        |
| 547 | -            ->selectRaw('CASE WHEN COUNT(branch) > 1 THEN 0 ELSE MIN(branch) END AS branches') | 
                                                        |
| 548 | -            ->groupBy('i_id'); | 
                                                        |
| 549 | -  | 
                                                        |
| 550 | -        return DB::table('maj_sosa') | 
                                                        |
| 551 | - ->rightJoinSub(  | 
                                                        |
| 552 | - $consolidated_ancestors_branches,  | 
                                                        |
| 553 | - 'indi_branch_consolidated',  | 
                                                        |
| 554 | -                function (JoinClause $join) use ($gen): void { | 
                                                        |
| 555 | -                    $join->where('maj_sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 556 | -                        ->where('maj_sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 557 | -                        ->where('branches', '>', 0) | 
                                                        |
| 558 | -                        ->whereRaw('majs_sosa = POW(2, ? - 1) + branches - 1', [$gen]); | 
                                                        |
| 559 | - }  | 
                                                        |
| 560 | - )  | 
                                                        |
| 561 | - ->select(['branches', 'majs_i_id'])  | 
                                                        |
| 562 | -            ->selectRaw('COUNT(i_id) AS count_indi') | 
                                                        |
| 563 | - ->groupBy(['branches', 'majs_i_id'])  | 
                                                        |
| 564 | -            ->get()->keyBy('branches'); | 
                                                        |
| 565 | - }  | 
                                                        |
| 351 | + $ancestors_contributions_sum = DB::connection()->query()  | 
                                                        |
| 352 | + ->fromSub($root_ancestors_contributions->unionAll($known_ancestors_contributions), 'sosa_contribs')  | 
                                                        |
| 353 | + ->select(['sosa_contribs.gen', 'sosa_contribs.majs_gedcom_id', 'sosa_contribs.majs_user_id'])  | 
                                                        |
| 354 | + ->addSelect(['sosa_contribs.majs_i_id', 'sosa_contribs.contrib'])  | 
                                                        |
| 355 | +			->selectRaw('COUNT(' . $table_prefix . 'sosa_contribs.majs_i_id) * ' . | 
                                                        |
| 356 | + $table_prefix . 'sosa_contribs.contrib AS totalContrib')  | 
                                                        |
| 357 | +			->leftJoin('maj_sosa AS sosa_low', function (JoinClause $join): void { | 
                                                        |
| 358 | +				$join->on('sosa_low.majs_gen', '<', 'sosa_contribs.majs_gen') | 
                                                        |
| 359 | +					->on('sosa_low.majs_i_id', '=', 'sosa_contribs.majs_i_id') | 
                                                        |
| 360 | +					->where('sosa_low.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 361 | +					->where('sosa_low.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 362 | + })  | 
                                                        |
| 363 | +			->whereNull('sosa_low.majs_sosa') | 
                                                        |
| 364 | + ->groupBy(['sosa_contribs.gen', 'sosa_contribs.majs_gedcom_id', 'sosa_contribs.majs_user_id',  | 
                                                        |
| 365 | + 'sosa_contribs.majs_i_id', 'sosa_contribs.contrib']);  | 
                                                        |
| 366 | +  | 
                                                        |
| 367 | + // Aggregate all generation roots to compute root and generation pedigree collapse  | 
                                                        |
| 368 | + $pedi_collapse_coll = DB::connection()->query()->fromSub($ancestors_contributions_sum, 'sosa_contribs_sum')  | 
                                                        |
| 369 | +			->select(['gen'])->selectRaw('SUM(contrib), SUM(totalContrib)') | 
                                                        |
| 370 | +			->selectRaw('1 - SUM(contrib) / SUM(totalContrib) AS pedi_collapse_roots')  // Roots/horizontal collapse | 
                                                        |
| 371 | +			->selectRaw('1 - SUM(totalContrib) / POWER ( 2, gen - 1) AS pedi_collapse_xgen') // Crossgeneration collapse | 
                                                        |
| 372 | + ->groupBy(['gen', 'majs_gedcom_id', 'majs_user_id'])  | 
                                                        |
| 373 | +			->orderBy('gen') | 
                                                        |
| 374 | + ->get();  | 
                                                        |
| 375 | +  | 
                                                        |
| 376 | + $pedi_collapse_by_gen = [];  | 
                                                        |
| 377 | +		foreach ($pedi_collapse_coll as $collapse_gen) { | 
                                                        |
| 378 | + $pedi_collapse_by_gen[(int) $collapse_gen->gen] = array(  | 
                                                        |
| 379 | + 'pedi_collapse_roots' => (float) $collapse_gen->pedi_collapse_roots,  | 
                                                        |
| 380 | + 'pedi_collapse_xgen' => (float) $collapse_gen->pedi_collapse_xgen  | 
                                                        |
| 381 | + );  | 
                                                        |
| 382 | + }  | 
                                                        |
| 383 | + return $pedi_collapse_by_gen;  | 
                                                        |
| 384 | + }  | 
                                                        |
| 385 | +  | 
                                                        |
| 386 | + /**  | 
                                                        |
| 387 | + * Return a Collection of the mean generation depth and deviation for all Sosa ancestors at a given generation.  | 
                                                        |
| 388 | + * Sosa 1 is of generation 1.  | 
                                                        |
| 389 | + *  | 
                                                        |
| 390 | + * Mean generation depth and deviation are calculated based on the works of Marie-Héléne Cazes and Pierre Cazes,  | 
                                                        |
| 391 | + * published in Population (French Edition), Vol. 51, No. 1 (Jan. - Feb., 1996), pp. 117-140  | 
                                                        |
| 392 | + * http://kintip.net/index.php?option=com_jdownloads&task=download.send&id=9&catid=4&m=0  | 
                                                        |
| 393 | + *  | 
                                                        |
| 394 | + * Format:  | 
                                                        |
| 395 | + * - key : sosa number of the ancestor  | 
                                                        |
| 396 | + * - values:  | 
                                                        |
| 397 | + * - root_ancestor_id : ID of the ancestor  | 
                                                        |
| 398 | + * - mean_gen_depth : Mean generation depth  | 
                                                        |
| 399 | + * - stddev_gen_depth : Standard deviation of generation depth  | 
                                                        |
| 400 | + *  | 
                                                        |
| 401 | + * @param int $gen Sosa generation  | 
                                                        |
| 402 | + * @return Collection<int, \stdClass>  | 
                                                        |
| 403 | + */  | 
                                                        |
| 404 | + public function generationDepthStatsAtGeneration(int $gen): Collection  | 
                                                        |
| 405 | +	{ | 
                                                        |
| 406 | +		if (!$this->isPdoSupported()) { | 
                                                        |
| 407 | + return collect();  | 
                                                        |
| 408 | + }  | 
                                                        |
| 409 | +  | 
                                                        |
| 410 | + $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 411 | +		$missing_ancestors_by_gen = DB::table('maj_sosa AS sosa') | 
                                                        |
| 412 | + ->selectRaw($table_prefix . 'sosa.majs_gen - ? AS majs_gen_norm', [$gen])  | 
                                                        |
| 413 | +			->selectRaw('FLOOR(((' . $table_prefix . 'sosa.majs_sosa / POW(2, ' . $table_prefix . 'sosa.majs_gen -1 )) - 1) * POWER(2, ? - 1)) + POWER(2, ? - 1) AS root_ancestor', [$gen, $gen])   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 414 | +			->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 415 | +			->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 416 | +			->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 417 | + // Link to sosa's father  | 
                                                        |
| 418 | + $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 419 | +				->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 420 | +				->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 421 | + })  | 
                                                        |
| 422 | +			->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 423 | + // Link to sosa's mother  | 
                                                        |
| 424 | + $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 425 | +				->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 426 | +				->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 427 | + })  | 
                                                        |
| 428 | +			->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 429 | +			->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 430 | +			->where('sosa.majs_gen', '>=', $gen) | 
                                                        |
| 431 | +			->where(function (Builder $query): void { | 
                                                        |
| 432 | +				$query->whereNull('sosa_fat.majs_i_id') | 
                                                        |
| 433 | +					->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        |
| 434 | + })  | 
                                                        |
| 435 | + ->groupBy(['sosa.majs_gen', 'root_ancestor']);  | 
                                                        |
| 436 | +  | 
                                                        |
| 437 | +		return DB::table('maj_sosa AS sosa_list') | 
                                                        |
| 438 | + ->select(['stats_by_gen.root_ancestor AS root_ancestor_sosa', 'sosa_list.majs_i_id as root_ancestor_id'])  | 
                                                        |
| 439 | +			->selectRaw('1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 440 | +			->selectRaw(' SQRT(' . | 
                                                        |
| 441 | + ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 442 | + ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 443 | + ' ) AS stddev_gen_depth')  | 
                                                        |
| 444 | +			->joinSub($missing_ancestors_by_gen, 'stats_by_gen', function (JoinClause $join): void { | 
                                                        |
| 445 | +				$join->on('sosa_list.majs_sosa', '=', 'stats_by_gen.root_ancestor') | 
                                                        |
| 446 | +					->where('sosa_list.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 447 | +					->where('sosa_list.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 448 | + })  | 
                                                        |
| 449 | + ->groupBy(['stats_by_gen.root_ancestor', 'sosa_list.majs_i_id'])  | 
                                                        |
| 450 | +			->orderBy('stats_by_gen.root_ancestor') | 
                                                        |
| 451 | +			->get()->keyBy('root_ancestor_sosa'); | 
                                                        |
| 452 | + }  | 
                                                        |
| 453 | +  | 
                                                        |
| 454 | + /**  | 
                                                        |
| 455 | + * Return a collection of the most duplicated root Sosa ancestors.  | 
                                                        |
| 456 | + * The number of ancestors to return is limited by the parameter $limit.  | 
                                                        |
| 457 | + * If several individuals are tied when reaching the limit, none of them are returned,  | 
                                                        |
| 458 | + * which means that there can be less individuals returned than requested.  | 
                                                        |
| 459 | + *  | 
                                                        |
| 460 | + * Format:  | 
                                                        |
| 461 | + * - value:  | 
                                                        |
| 462 | + * - sosa_i_id : sosa individual  | 
                                                        |
| 463 | + * - sosa_count: number of duplications of the ancestor (e.g. 3 if it appears 3 times)  | 
                                                        |
| 464 | + *  | 
                                                        |
| 465 | + * @param int $limit  | 
                                                        |
| 466 | + * @return Collection<\stdClass>  | 
                                                        |
| 467 | + */  | 
                                                        |
| 468 | + public function topMultipleAncestorsWithNoTies(int $limit): Collection  | 
                                                        |
| 469 | +	{ | 
                                                        |
| 470 | + $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        |
| 471 | +		$multiple_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        |
| 472 | +			->select('sosa.majs_i_id AS sosa_i_id') | 
                                                        |
| 473 | +			->selectRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) AS sosa_count') | 
                                                        |
| 474 | +			->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 475 | + // Link to sosa's father  | 
                                                        |
| 476 | + $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 477 | +					->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 478 | +					->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 479 | + })  | 
                                                        |
| 480 | +			->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 481 | + // Link to sosa's mother  | 
                                                        |
| 482 | + $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 483 | +				->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 484 | +				->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        |
| 485 | + })  | 
                                                        |
| 486 | +			->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 487 | +			->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 488 | +			->whereNull('sosa_fat.majs_sosa')   // We keep only root individuals, i.e. those with no father or mother | 
                                                        |
| 489 | +			->whereNull('sosa_mot.majs_sosa') | 
                                                        |
| 490 | +			->groupBy('sosa.majs_i_id') | 
                                                        |
| 491 | +			->havingRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) > 1')    // Limit to the duplicate sosas. | 
                                                        |
| 492 | +			->orderByRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) DESC, MIN(' . $table_prefix . 'sosa.majs_sosa) ASC')   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 493 | + ->limit($limit + 1) // We want to select one more than required, for ties  | 
                                                        |
| 494 | + ->get();  | 
                                                        |
| 495 | +  | 
                                                        |
| 496 | +		if ($multiple_ancestors->count() > $limit) { | 
                                                        |
| 497 | + $last_count = $multiple_ancestors->last()->sosa_count;  | 
                                                        |
| 498 | + $multiple_ancestors = $multiple_ancestors->reject(  | 
                                                        |
| 499 | + fn (stdClass $element): bool => $element->sosa_count === $last_count  | 
                                                        |
| 500 | + );  | 
                                                        |
| 501 | + }  | 
                                                        |
| 502 | + return $multiple_ancestors;  | 
                                                        |
| 503 | + }  | 
                                                        |
| 504 | +  | 
                                                        |
| 505 | + /**  | 
                                                        |
| 506 | + * Return a computed array of statistics about the dispersion of ancestors across the ancestors  | 
                                                        |
| 507 | + * at a specified generation.  | 
                                                        |
| 508 | + *  | 
                                                        |
| 509 | + * Format:  | 
                                                        |
| 510 | + * - key : rank of the ancestor in generation G for which exclusive ancestors have been found  | 
                                                        |
| 511 | + * For instance 3 represent the maternal grand father  | 
                                                        |
| 512 | + * 0 is used for shared ancestors  | 
                                                        |
| 513 | + * - values:  | 
                                                        |
| 514 | + * - branches: same as key  | 
                                                        |
| 515 | + * - majs_i_id: xref of the ancestor at rank key in generation G, or null for shared ancestors  | 
                                                        |
| 516 | + * - count_indi: number of ancestors exclusively in the ancestors of the ancestor at rank key  | 
                                                        |
| 517 | + *  | 
                                                        |
| 518 | + * For instance a result at generation 3 could be :  | 
                                                        |
| 519 | + * [  | 
                                                        |
| 520 | +	 *  0 => { branches: 0, majs_i_id: X1, count_indi: 12 } -> 12 ancestors are shared by the grand-parents | 
                                                        |
| 521 | +	 *  1 => { branches: 1, majs_i_id: X2, count_indi: 32 } -> 32 ancestors are exclusive to the paternal grand-father | 
                                                        |
| 522 | +	 *  2 => { branches: 2, majs_i_id: X3, count_indi: 25 } -> 25 ancestors are exclusive to the paternal grand-mother | 
                                                        |
| 523 | +	 *  3 => { branches: 3, majs_i_id: X4, count_indi: 12 } -> 12 ancestors are exclusive to the maternal grand-father | 
                                                        |
| 524 | +	 *  4 => { branches: 4, majs_i_id: X5, count_indi: 30 } -> 30 ancestors are exclusive to the maternal grand-mother | 
                                                        |
| 525 | + * ]  | 
                                                        |
| 526 | + *  | 
                                                        |
| 527 | + * @param int $gen  | 
                                                        |
| 528 | + * @return Collection<int, \stdClass>  | 
                                                        |
| 529 | + */  | 
                                                        |
| 530 | + public function ancestorsDispersionForGeneration(int $gen): Collection  | 
                                                        |
| 531 | +	{ | 
                                                        |
| 532 | +		if (!$this->isPdoSupported()) { | 
                                                        |
| 533 | + return collect();  | 
                                                        |
| 534 | + }  | 
                                                        |
| 535 | +  | 
                                                        |
| 536 | +		$ancestors_branches = DB::table('maj_sosa') | 
                                                        |
| 537 | +			->select('majs_i_id AS i_id') | 
                                                        |
| 538 | +			->selectRaw('FLOOR(majs_sosa / POW(2, (majs_gen - ?))) - POW(2, ? -1) + 1 AS branch', [$gen, $gen]) | 
                                                        |
| 539 | +			->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 540 | +			->where('majs_user_id', '=', $this->user->id()) | 
                                                        |
| 541 | +			->where('majs_gen', '>=', $gen) | 
                                                        |
| 542 | +			->groupBy('majs_i_id', 'branch'); | 
                                                        |
| 543 | +  | 
                                                        |
| 544 | +		$consolidated_ancestors_branches = DB::table('maj_sosa') | 
                                                        |
| 545 | + ->fromSub($ancestors_branches, 'indi_branch')  | 
                                                        |
| 546 | +			->select('i_id') | 
                                                        |
| 547 | +			->selectRaw('CASE WHEN COUNT(branch) > 1 THEN 0 ELSE MIN(branch) END AS branches') | 
                                                        |
| 548 | +			->groupBy('i_id'); | 
                                                        |
| 549 | +  | 
                                                        |
| 550 | +		return DB::table('maj_sosa') | 
                                                        |
| 551 | + ->rightJoinSub(  | 
                                                        |
| 552 | + $consolidated_ancestors_branches,  | 
                                                        |
| 553 | + 'indi_branch_consolidated',  | 
                                                        |
| 554 | +				function (JoinClause $join) use ($gen): void { | 
                                                        |
| 555 | +					$join->where('maj_sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        |
| 556 | +						->where('maj_sosa.majs_user_id', '=', $this->user->id()) | 
                                                        |
| 557 | +						->where('branches', '>', 0) | 
                                                        |
| 558 | +						->whereRaw('majs_sosa = POW(2, ? - 1) + branches - 1', [$gen]); | 
                                                        |
| 559 | + }  | 
                                                        |
| 560 | + )  | 
                                                        |
| 561 | + ->select(['branches', 'majs_i_id'])  | 
                                                        |
| 562 | +			->selectRaw('COUNT(i_id) AS count_indi') | 
                                                        |
| 563 | + ->groupBy(['branches', 'majs_i_id'])  | 
                                                        |
| 564 | +			->get()->keyBy('branches'); | 
                                                        |
| 565 | + }  | 
                                                        |
| 566 | 566 | }  | 
                                                        
@@ -74,7 +74,7 @@ discard block  | 
                                                    ||
| 74 | 74 | */  | 
                                                        
| 75 | 75 | public function maxGeneration(): int  | 
                                                        
| 76 | 76 |      { | 
                                                        
| 77 | -        return (int) DB::table('maj_sosa') | 
                                                        |
| 77 | +        return (int)DB::table('maj_sosa') | 
                                                        |
| 78 | 78 |              ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 79 | 79 |              ->where('majs_user_id', '=', $this->user->id()) | 
                                                        
| 80 | 80 |              ->max('majs_gen'); | 
                                                        
@@ -151,8 +151,7 @@ discard block  | 
                                                    ||
| 151 | 151 |              ->selectRaw('SUM(majs_gen * majs_gen) AS sum_x2') | 
                                                        
| 152 | 152 | ->get()->first();  | 
                                                        
| 153 | 153 | |
| 154 | - return $row->n == 0 ? 0 :  | 
                                                        |
| 155 | - -($row->n * $row->sum_xy - $row->sum_x * $row->sum_y) / ($row->n * $row->sum_x2 - pow($row->sum_x, 2));  | 
                                                        |
| 154 | + return $row->n == 0 ? 0 : -($row->n * $row->sum_xy - $row->sum_x * $row->sum_y) / ($row->n * $row->sum_x2 - pow($row->sum_x, 2));  | 
                                                        |
| 156 | 155 | }  | 
                                                        
| 157 | 156 | |
| 158 | 157 | /**  | 
                                                        
@@ -176,10 +175,10 @@ discard block  | 
                                                    ||
| 176 | 175 | |
| 177 | 176 | $statistics_by_gen = [];  | 
                                                        
| 178 | 177 |          foreach ($stats_by_gen as $gen => $stats_gen) { | 
                                                        
| 179 | - $statistics_by_gen[(int) $stats_gen->gen] = array(  | 
                                                        |
| 180 | - 'sosaCount' => (int) $stats_gen->total_sosa,  | 
                                                        |
| 181 | - 'sosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_cumul,  | 
                                                        |
| 182 | - 'diffSosaTotalCount' => (int) $cumul_stats_by_gen[$gen]->total_distinct_cumul,  | 
                                                        |
| 178 | + $statistics_by_gen[(int)$stats_gen->gen] = array(  | 
                                                        |
| 179 | + 'sosaCount' => (int)$stats_gen->total_sosa,  | 
                                                        |
| 180 | + 'sosaTotalCount' => (int)$cumul_stats_by_gen[$gen]->total_cumul,  | 
                                                        |
| 181 | + 'diffSosaTotalCount' => (int)$cumul_stats_by_gen[$gen]->total_distinct_cumul,  | 
                                                        |
| 183 | 182 | 'firstBirth' => $stats_gen->first_year,  | 
                                                        
| 184 | 183 | 'firstEstimatedBirth' => $stats_gen->first_est_year,  | 
                                                        
| 185 | 184 | 'lastBirth' => $stats_gen->last_year,  | 
                                                        
@@ -223,7 +222,7 @@ discard block  | 
                                                    ||
| 223 | 222 |              ->where('majs_user_id', '=', $this->user->id()); | 
                                                        
| 224 | 223 | |
| 225 | 224 |          return DB::table('maj_sosa') | 
                                                        
| 226 | -            ->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 225 | +            ->joinSub($list_gen, 'list_gen', function(JoinClause $join): void { | 
                                                        |
| 227 | 226 |                  $join->on('maj_sosa.majs_gen', '<=', 'list_gen.majs_gen') | 
                                                        
| 228 | 227 |                  ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 229 | 228 |                  ->where('majs_user_id', '=', $this->user->id()); | 
                                                        
@@ -264,37 +263,37 @@ discard block  | 
                                                    ||
| 264 | 263 | ->select(['list_gen.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        
| 265 | 264 | ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        
| 266 | 265 | ->selectRaw(  | 
                                                        
| 267 | - '(CASE ' .  | 
                                                        |
| 268 | - ' WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL' .  | 
                                                        |
| 269 | - ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 270 | - ' ELSE 0 ' .  | 
                                                        |
| 271 | - ' END)' .  | 
                                                        |
| 272 | - ' + (CASE ' .  | 
                                                        |
| 273 | - ' WHEN ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL' .  | 
                                                        |
| 274 | - ' THEN POWER(2, ' . $table_prefix . 'list_gen.majs_gen - ' . $table_prefix . 'sosa.majs_gen - 1)' .  | 
                                                        |
| 275 | - ' ELSE 0 ' .  | 
                                                        |
| 266 | + '(CASE '.  | 
                                                        |
| 267 | + ' WHEN '.$table_prefix.'sosa_fat.majs_i_id IS NULL'.  | 
                                                        |
| 268 | + ' THEN POWER(2, '.$table_prefix.'list_gen.majs_gen - '.$table_prefix.'sosa.majs_gen - 1)'.  | 
                                                        |
| 269 | + ' ELSE 0 '.  | 
                                                        |
| 270 | + ' END)'.  | 
                                                        |
| 271 | + ' + (CASE '.  | 
                                                        |
| 272 | + ' WHEN '.$table_prefix.'sosa_mot.majs_i_id IS NULL'.  | 
                                                        |
| 273 | + ' THEN POWER(2, '.$table_prefix.'list_gen.majs_gen - '.$table_prefix.'sosa.majs_gen - 1)'.  | 
                                                        |
| 274 | + ' ELSE 0 '.  | 
                                                        |
| 276 | 275 | ' END) contrib'  | 
                                                        
| 277 | 276 | )  | 
                                                        
| 278 | -            ->joinSub($list_gen, 'list_gen', function (JoinClause $join): void { | 
                                                        |
| 277 | +            ->joinSub($list_gen, 'list_gen', function(JoinClause $join): void { | 
                                                        |
| 279 | 278 |                  $join->on('sosa.majs_gen', '<', 'list_gen.majs_gen') | 
                                                        
| 280 | 279 |                      ->where('majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 281 | 280 |                      ->where('majs_user_id', '=', $this->user->id()); | 
                                                        
| 282 | 281 | })  | 
                                                        
| 283 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 282 | +            ->leftJoin('maj_sosa AS sosa_fat', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 284 | 283 | // Link to sosa's father  | 
                                                        
| 285 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 284 | + $join->whereRaw($table_prefix.'sosa_fat.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa')  | 
                                                        |
| 286 | 285 |                      ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 287 | 286 |                      ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        
| 288 | 287 | })  | 
                                                        
| 289 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 288 | +            ->leftJoin('maj_sosa AS sosa_mot', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 290 | 289 | // Link to sosa's mother  | 
                                                        
| 291 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 290 | + $join->whereRaw($table_prefix.'sosa_mot.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa + 1')  | 
                                                        |
| 292 | 291 |                      ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 293 | 292 |                      ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        
| 294 | 293 | })  | 
                                                        
| 295 | 294 |              ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 296 | 295 |              ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        
| 297 | -            ->where(function (Builder $query): void { | 
                                                        |
| 296 | +            ->where(function(Builder $query): void { | 
                                                        |
| 298 | 297 |                  $query->whereNull('sosa_fat.majs_i_id') | 
                                                        
| 299 | 298 |                  ->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        
| 300 | 299 | });  | 
                                                        
@@ -304,24 +303,24 @@ discard block  | 
                                                    ||
| 304 | 303 | */  | 
                                                        
| 305 | 304 |          $non_roots_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        
| 306 | 305 | ->select(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id', 'sosa.majs_sosa'])  | 
                                                        
| 307 | -            ->selectRaw('MAX(' . $table_prefix . 'sosa_anc.majs_sosa) - MIN(' . $table_prefix . 'sosa_anc.majs_sosa)' . | 
                                                        |
| 306 | +            ->selectRaw('MAX('.$table_prefix.'sosa_anc.majs_sosa) - MIN('.$table_prefix.'sosa_anc.majs_sosa)'. | 
                                                        |
| 308 | 307 | ' AS full_ancestors')  | 
                                                        
| 309 | -            ->join('maj_sosa AS sosa_anc', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 308 | +            ->join('maj_sosa AS sosa_anc', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 310 | 309 |                  $join->on('sosa.majs_gen', '<', 'sosa_anc.majs_gen') | 
                                                        
| 311 | -                    ->whereRaw('FLOOR(' . $table_prefix . 'sosa_anc.majs_sosa / POWER(2, ' . | 
                                                        |
| 312 | - $table_prefix . 'sosa_anc.majs_gen - ' . $table_prefix . 'sosa.majs_gen)) = ' .  | 
                                                        |
| 313 | - $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 310 | +                    ->whereRaw('FLOOR('.$table_prefix.'sosa_anc.majs_sosa / POWER(2, '. | 
                                                        |
| 311 | + $table_prefix.'sosa_anc.majs_gen - '.$table_prefix.'sosa.majs_gen)) = '.  | 
                                                        |
| 312 | + $table_prefix.'sosa.majs_sosa')  | 
                                                        |
| 314 | 313 |                      ->where('sosa_anc.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 315 | 314 |                      ->where('sosa_anc.majs_user_id', '=', $this->user->id()); | 
                                                        
| 316 | 315 | })  | 
                                                        
| 317 | 316 |              ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 318 | 317 |              ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        
| 319 | -            ->whereIn('sosa_anc.majs_i_id', function (Builder $query) use ($table_prefix): void { | 
                                                        |
| 318 | +            ->whereIn('sosa_anc.majs_i_id', function(Builder $query) use ($table_prefix): void { | 
                                                        |
| 320 | 319 |                  $query->from('maj_sosa AS sosa_gen') | 
                                                        
| 321 | 320 |                  ->select('sosa_gen.majs_i_id')->distinct() | 
                                                        
| 322 | 321 |                  ->where('sosa_gen.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 323 | 322 |                  ->where('sosa_gen.majs_user_id', '=', $this->user->id()) | 
                                                        
| 324 | - ->whereRaw($table_prefix . 'sosa_gen.majs_gen = ' . $table_prefix . 'sosa.majs_gen');  | 
                                                        |
| 323 | + ->whereRaw($table_prefix.'sosa_gen.majs_gen = '.$table_prefix.'sosa.majs_gen');  | 
                                                        |
| 325 | 324 | })  | 
                                                        
| 326 | 325 | ->groupBy(['sosa.majs_gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id',  | 
                                                        
| 327 | 326 | 'sosa.majs_sosa', 'sosa.majs_i_id']);  | 
                                                        
@@ -334,7 +333,7 @@ discard block  | 
                                                    ||
| 334 | 333 | ->select(['sosa.majs_gen AS gen', 'sosa.majs_gedcom_id', 'sosa.majs_user_id'])  | 
                                                        
| 335 | 334 | ->addSelect(['sosa.majs_i_id', 'sosa.majs_gen'])  | 
                                                        
| 336 | 335 |              ->selectRaw('1 AS contrib') | 
                                                        
| 337 | -            ->leftJoinSub($non_roots_ancestors, 'nonroot', function (JoinClause $join): void { | 
                                                        |
| 336 | +            ->leftJoinSub($non_roots_ancestors, 'nonroot', function(JoinClause $join): void { | 
                                                        |
| 338 | 337 |                  $join->on('sosa.majs_gen', '=', 'nonroot.majs_gen') | 
                                                        
| 339 | 338 |                      ->on('sosa.majs_sosa', '=', 'nonroot.majs_sosa') | 
                                                        
| 340 | 339 |                      ->where('nonroot.full_ancestors', '>', 0) | 
                                                        
@@ -352,9 +351,9 @@ discard block  | 
                                                    ||
| 352 | 351 | ->fromSub($root_ancestors_contributions->unionAll($known_ancestors_contributions), 'sosa_contribs')  | 
                                                        
| 353 | 352 | ->select(['sosa_contribs.gen', 'sosa_contribs.majs_gedcom_id', 'sosa_contribs.majs_user_id'])  | 
                                                        
| 354 | 353 | ->addSelect(['sosa_contribs.majs_i_id', 'sosa_contribs.contrib'])  | 
                                                        
| 355 | -            ->selectRaw('COUNT(' . $table_prefix . 'sosa_contribs.majs_i_id) * ' . | 
                                                        |
| 356 | - $table_prefix . 'sosa_contribs.contrib AS totalContrib')  | 
                                                        |
| 357 | -            ->leftJoin('maj_sosa AS sosa_low', function (JoinClause $join): void { | 
                                                        |
| 354 | +            ->selectRaw('COUNT('.$table_prefix.'sosa_contribs.majs_i_id) * '. | 
                                                        |
| 355 | + $table_prefix.'sosa_contribs.contrib AS totalContrib')  | 
                                                        |
| 356 | +            ->leftJoin('maj_sosa AS sosa_low', function(JoinClause $join): void { | 
                                                        |
| 358 | 357 |                  $join->on('sosa_low.majs_gen', '<', 'sosa_contribs.majs_gen') | 
                                                        
| 359 | 358 |                      ->on('sosa_low.majs_i_id', '=', 'sosa_contribs.majs_i_id') | 
                                                        
| 360 | 359 |                      ->where('sosa_low.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
@@ -375,9 +374,9 @@ discard block  | 
                                                    ||
| 375 | 374 | |
| 376 | 375 | $pedi_collapse_by_gen = [];  | 
                                                        
| 377 | 376 |          foreach ($pedi_collapse_coll as $collapse_gen) { | 
                                                        
| 378 | - $pedi_collapse_by_gen[(int) $collapse_gen->gen] = array(  | 
                                                        |
| 379 | - 'pedi_collapse_roots' => (float) $collapse_gen->pedi_collapse_roots,  | 
                                                        |
| 380 | - 'pedi_collapse_xgen' => (float) $collapse_gen->pedi_collapse_xgen  | 
                                                        |
| 377 | + $pedi_collapse_by_gen[(int)$collapse_gen->gen] = array(  | 
                                                        |
| 378 | + 'pedi_collapse_roots' => (float)$collapse_gen->pedi_collapse_roots,  | 
                                                        |
| 379 | + 'pedi_collapse_xgen' => (float)$collapse_gen->pedi_collapse_xgen  | 
                                                        |
| 381 | 380 | );  | 
                                                        
| 382 | 381 | }  | 
                                                        
| 383 | 382 | return $pedi_collapse_by_gen;  | 
                                                        
@@ -409,26 +408,26 @@ discard block  | 
                                                    ||
| 409 | 408 | |
| 410 | 409 | $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        
| 411 | 410 |          $missing_ancestors_by_gen = DB::table('maj_sosa AS sosa') | 
                                                        
| 412 | - ->selectRaw($table_prefix . 'sosa.majs_gen - ? AS majs_gen_norm', [$gen])  | 
                                                        |
| 413 | -            ->selectRaw('FLOOR(((' . $table_prefix . 'sosa.majs_sosa / POW(2, ' . $table_prefix . 'sosa.majs_gen -1 )) - 1) * POWER(2, ? - 1)) + POWER(2, ? - 1) AS root_ancestor', [$gen, $gen])   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 414 | -            ->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 415 | -            ->selectRaw('SUM(CASE WHEN ' . $table_prefix . 'sosa_fat.majs_i_id IS NULL AND ' . $table_prefix . 'sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 416 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 411 | + ->selectRaw($table_prefix.'sosa.majs_gen - ? AS majs_gen_norm', [$gen])  | 
                                                        |
| 412 | +            ->selectRaw('FLOOR((('.$table_prefix.'sosa.majs_sosa / POW(2, '.$table_prefix.'sosa.majs_gen -1 )) - 1) * POWER(2, ? - 1)) + POWER(2, ? - 1) AS root_ancestor', [$gen, $gen])   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 413 | +            ->selectRaw('SUM(CASE WHEN '.$table_prefix.'sosa_fat.majs_i_id IS NULL AND '.$table_prefix.'sosa_mot.majs_i_id IS NULL THEN 1 ELSE 0 END) AS full_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 414 | +            ->selectRaw('SUM(CASE WHEN '.$table_prefix.'sosa_fat.majs_i_id IS NULL AND '.$table_prefix.'sosa_mot.majs_i_id IS NULL THEN 0 ELSE 1 END) As semi_root_count')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 415 | +            ->leftJoin('maj_sosa AS sosa_fat', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 417 | 416 | // Link to sosa's father  | 
                                                        
| 418 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 417 | + $join->whereRaw($table_prefix.'sosa_fat.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa')  | 
                                                        |
| 419 | 418 |                  ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 420 | 419 |                  ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        
| 421 | 420 | })  | 
                                                        
| 422 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 421 | +            ->leftJoin('maj_sosa AS sosa_mot', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 423 | 422 | // Link to sosa's mother  | 
                                                        
| 424 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 423 | + $join->whereRaw($table_prefix.'sosa_mot.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa + 1')  | 
                                                        |
| 425 | 424 |                  ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 426 | 425 |                  ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        
| 427 | 426 | })  | 
                                                        
| 428 | 427 |              ->where('sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 429 | 428 |              ->where('sosa.majs_user_id', '=', $this->user->id()) | 
                                                        
| 430 | 429 |              ->where('sosa.majs_gen', '>=', $gen) | 
                                                        
| 431 | -            ->where(function (Builder $query): void { | 
                                                        |
| 430 | +            ->where(function(Builder $query): void { | 
                                                        |
| 432 | 431 |                  $query->whereNull('sosa_fat.majs_i_id') | 
                                                        
| 433 | 432 |                      ->orWhereNull('sosa_mot.majs_i_id'); | 
                                                        
| 434 | 433 | })  | 
                                                        
@@ -437,11 +436,11 @@ discard block  | 
                                                    ||
| 437 | 436 |          return DB::table('maj_sosa AS sosa_list') | 
                                                        
| 438 | 437 | ->select(['stats_by_gen.root_ancestor AS root_ancestor_sosa', 'sosa_list.majs_i_id as root_ancestor_id'])  | 
                                                        
| 439 | 438 |              ->selectRaw('1 + SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) /  (2 * POWER(2, majs_gen_norm))) AS mean_gen_depth')  //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        
| 440 | -            ->selectRaw(' SQRT(' . | 
                                                        |
| 441 | - ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 442 | - ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)' . //@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 439 | +            ->selectRaw(' SQRT('. | 
                                                        |
| 440 | + ' SUM(POWER(majs_gen_norm, 2) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm)))'.//@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 441 | + ' - POWER( SUM( (majs_gen_norm) * ( 2 * full_root_count + semi_root_count) / (2 * POWER(2, majs_gen_norm))), 2)'.//@phpcs:ignore Generic.Files.LineLength.TooLong  | 
                                                        |
| 443 | 442 | ' ) AS stddev_gen_depth')  | 
                                                        
| 444 | -            ->joinSub($missing_ancestors_by_gen, 'stats_by_gen', function (JoinClause $join): void { | 
                                                        |
| 443 | +            ->joinSub($missing_ancestors_by_gen, 'stats_by_gen', function(JoinClause $join): void { | 
                                                        |
| 445 | 444 |                  $join->on('sosa_list.majs_sosa', '=', 'stats_by_gen.root_ancestor') | 
                                                        
| 446 | 445 |                      ->where('sosa_list.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 447 | 446 |                      ->where('sosa_list.majs_user_id', '=', $this->user->id()); | 
                                                        
@@ -470,16 +469,16 @@ discard block  | 
                                                    ||
| 470 | 469 | $table_prefix = DB::connection()->getTablePrefix();  | 
                                                        
| 471 | 470 |          $multiple_ancestors = DB::table('maj_sosa AS sosa') | 
                                                        
| 472 | 471 |              ->select('sosa.majs_i_id AS sosa_i_id') | 
                                                        
| 473 | -            ->selectRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) AS sosa_count') | 
                                                        |
| 474 | -            ->leftJoin('maj_sosa AS sosa_fat', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 472 | +            ->selectRaw('COUNT('.$table_prefix.'sosa.majs_sosa) AS sosa_count') | 
                                                        |
| 473 | +            ->leftJoin('maj_sosa AS sosa_fat', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 475 | 474 | // Link to sosa's father  | 
                                                        
| 476 | - $join->whereRaw($table_prefix . 'sosa_fat.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa')  | 
                                                        |
| 475 | + $join->whereRaw($table_prefix.'sosa_fat.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa')  | 
                                                        |
| 477 | 476 |                      ->where('sosa_fat.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 478 | 477 |                      ->where('sosa_fat.majs_user_id', '=', $this->user->id()); | 
                                                        
| 479 | 478 | })  | 
                                                        
| 480 | -            ->leftJoin('maj_sosa AS sosa_mot', function (JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 479 | +            ->leftJoin('maj_sosa AS sosa_mot', function(JoinClause $join) use ($table_prefix): void { | 
                                                        |
| 481 | 480 | // Link to sosa's mother  | 
                                                        
| 482 | - $join->whereRaw($table_prefix . 'sosa_mot.majs_sosa = 2 * ' . $table_prefix . 'sosa.majs_sosa + 1')  | 
                                                        |
| 481 | + $join->whereRaw($table_prefix.'sosa_mot.majs_sosa = 2 * '.$table_prefix.'sosa.majs_sosa + 1')  | 
                                                        |
| 483 | 482 |                  ->where('sosa_mot.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 484 | 483 |                  ->where('sosa_mot.majs_user_id', '=', $this->user->id()); | 
                                                        
| 485 | 484 | })  | 
                                                        
@@ -488,15 +487,15 @@ discard block  | 
                                                    ||
| 488 | 487 |              ->whereNull('sosa_fat.majs_sosa')   // We keep only root individuals, i.e. those with no father or mother | 
                                                        
| 489 | 488 |              ->whereNull('sosa_mot.majs_sosa') | 
                                                        
| 490 | 489 |              ->groupBy('sosa.majs_i_id') | 
                                                        
| 491 | -            ->havingRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) > 1')    // Limit to the duplicate sosas. | 
                                                        |
| 492 | -            ->orderByRaw('COUNT(' . $table_prefix . 'sosa.majs_sosa) DESC, MIN(' . $table_prefix . 'sosa.majs_sosa) ASC')   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 490 | +            ->havingRaw('COUNT('.$table_prefix.'sosa.majs_sosa) > 1')    // Limit to the duplicate sosas. | 
                                                        |
| 491 | +            ->orderByRaw('COUNT('.$table_prefix.'sosa.majs_sosa) DESC, MIN('.$table_prefix.'sosa.majs_sosa) ASC')   //@phpcs:ignore Generic.Files.LineLength.TooLong | 
                                                        |
| 493 | 492 | ->limit($limit + 1) // We want to select one more than required, for ties  | 
                                                        
| 494 | 493 | ->get();  | 
                                                        
| 495 | 494 | |
| 496 | 495 |          if ($multiple_ancestors->count() > $limit) { | 
                                                        
| 497 | 496 | $last_count = $multiple_ancestors->last()->sosa_count;  | 
                                                        
| 498 | 497 | $multiple_ancestors = $multiple_ancestors->reject(  | 
                                                        
| 499 | - fn (stdClass $element): bool => $element->sosa_count === $last_count  | 
                                                        |
| 498 | + fn (stdClass $element): bool => $element->sosa_count === $last_count  | 
                                                        |
| 500 | 499 | );  | 
                                                        
| 501 | 500 | }  | 
                                                        
| 502 | 501 | return $multiple_ancestors;  | 
                                                        
@@ -551,7 +550,7 @@ discard block  | 
                                                    ||
| 551 | 550 | ->rightJoinSub(  | 
                                                        
| 552 | 551 | $consolidated_ancestors_branches,  | 
                                                        
| 553 | 552 | 'indi_branch_consolidated',  | 
                                                        
| 554 | -                function (JoinClause $join) use ($gen): void { | 
                                                        |
| 553 | +                function(JoinClause $join) use ($gen): void { | 
                                                        |
| 555 | 554 |                      $join->where('maj_sosa.majs_gedcom_id', '=', $this->tree->id()) | 
                                                        
| 556 | 555 |                          ->where('maj_sosa.majs_user_id', '=', $this->user->id()) | 
                                                        
| 557 | 556 |                          ->where('branches', '>', 0) |