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by Douglas
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Python Modules Changes

 ⇢ A mandos.analysis._plot_utils added
⇢ A tests.analysis added
⇢ A mandos.model.concrete_hits added
⇢ A tests.analysis.test_prep added
⇢ A tests.entries added
⇢ A mandos.model.hit_utils added
⇢ A mandos.model.rdkit_utils added
⇢ A mandos.analysis.io_defns added
⇢ A mandos.analysis.projection added
⇢ A mandos.analysis.corr_plots added
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Python Functions Changes

 ⇢ C mandos.entries.searcher.CompoundIdFiller._matches(... added
⇢ A mandos.commands.MiscCommands.prep_phi() added
⇢ A mandos.model.ReflectionUtils.subclasses() added
⇢ A mandos.MandosSetup._set_logging() added
⇢ A mandos.commands.MiscCommands.calc_ecfp_psi() added
⇢ A mandos.analysis.enrichment.EnrichmentCalculation._... added
⇢ A mandos.analysis.prepping.MatrixPrep.ecfp_matrix() added
⇢ A mandos.commands.MiscCommands.calc_umap() added
⇢ A mandos.search.chembl.ChemblScrapeSearch._scrape() added
⇢ A mandos.entries.searcher.CompoundIdFiller.fill() added
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A ↛
mandos.entries.EntryMeta.set_logging() removed
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mandos.commands.MiscCommands.filter_taxa() removed
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mandos.commands.MiscCommands.find() removed
A ↛
mandos.commands.MiscCommands.beta() removed
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mandos.analysis.enrichment.EnrichmentCalculator.ca... removed
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mandos.analysis.enrichment.EnrichmentAlg.descripti... removed
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mandos.analysis.enrichment.EnrichmentAlg.clazz() removed
A ↛
mandos.model.hits.HitUtils.hits_to_df() removed
A ↛
mandos.model.hits.HitUtils.df_to_hits() removed
A ↛
mandos.analysis.enrichment.EnrichmentAlg.symbol() removed
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