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# This Python file uses the following encoding: utf-8 |
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""" |
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The :mod:`galactic.context.memory` module give the ability to define |
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:class:`Context <galactic.context.Context>` that resides in memory. |
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""" |
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from typing import Mapping, Iterable, Union |
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from galactic.context import Context, Model, Population, Attribute, Individual |
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from galactic.context.mixins import ContextHolder, PopulationHolder, ModelHolder, \ |
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ConcreteAttribute, ConcreteIndividual, AttributesHolder, IndividualsHolder, ValuesHolder |
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# pylint: disable=too-few-public-methods,abstract-method,super-init-not-called |
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class MemoryContext( |
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PopulationHolder['MemoryPopulation'], |
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ModelHolder['MemoryModel'], |
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Context['MemoryPopulation', 'MemoryModel', 'MemoryIndividual', 'MemoryAttribute'] |
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): |
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""" |
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The :class:`MemoryContext` class is designed to define contexts in memory. It inherits of all |
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the behavior from the :class:`Context <galactic.context.Context>` class and allows direct |
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creation and modification of a context. |
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It's possible to create a context without nothing. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext() |
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>>> print(context) |
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{'population': [], 'model': {}} |
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It's possible to create a context specifying the model definition. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext(definition={'mybool': bool, 'myint': int}) |
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>>> print(context) |
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{'population': [], 'model': {'mybool': <class 'bool'>, 'myint': <class 'int'>}} |
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It's possible to create a context specifying the model definition and the list of individual |
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identifiers. |
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Example |
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------- |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals=['0', '1'] |
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... ) |
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>>> print(context) |
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{'population': ['0', '1'], 'model': {'mybool': <class 'bool'>, 'myint': <class 'int'>}} |
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It's possible to create a context specifying the model definition and the individual values. |
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Example |
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------- |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals={'0': {'mybool': True}, '1':{'myint': 1}} |
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... ) |
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>>> {ident: str(context.population[ident]) for ident in context.population} |
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{'0': "{'mybool': True, 'myint': 0}", '1': "{'mybool': False, 'myint': 1}"} |
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.. versionadded:: 0.0.1 |
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""" |
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def __init__(self, **kwargs): |
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""" |
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Initialise a context in memory. |
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Keyword Arguments |
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----------------- |
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definition : :class:`Mapping[str, type] <python:collections.abc.Mapping>` |
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definition of the context by a mapping from name of attributes to their type |
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individuals : :class:`Union[Iterable[str], Mapping[str, Mapping[str, object]]]` |
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initial iterable of individual identifiers or a mapping from individual |
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identifiers to individual values |
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Raises |
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------ |
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KeyError |
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if an attribute is not in the definition |
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ValueError |
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if a value does not correspond to an attribute type |
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TypeError |
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if the definition or if the individuals parameter are not of the correct type |
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.. versionadded:: 0.0.1 |
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""" |
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definition = MemoryContext._definition(**kwargs) |
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individuals = MemoryContext._individuals(**kwargs) |
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super().__init__( |
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model=MemoryModel(self, {} if definition is None else definition), |
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population=MemoryPopulation(self, []) |
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) |
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if isinstance(individuals, Mapping): |
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for identifier, values in individuals.items(): |
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self.population[identifier] = values |
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else: |
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if individuals is not None: |
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for identifier in individuals: |
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self.population[identifier] = {} |
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@staticmethod |
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def _definition(**kwargs) -> Mapping[str, type]: |
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""" |
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Get the definition from the keyword arguments. |
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Keyword arguments |
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----------------- |
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definition : :class:`Mapping[str, type] <python:collections.abc.Mapping>` |
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definition of the context by a mapping from name of attributes to their type |
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Raises |
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------ |
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TypeError |
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if the definition parameter is not of the correct type |
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.. versionadded:: 0.0.2 |
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""" |
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if 'definition' in kwargs: |
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definition = kwargs['definition'] |
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if not isinstance(definition, Mapping): |
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raise TypeError |
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else: |
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definition = None |
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return definition |
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@staticmethod |
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def _individuals(**kwargs) -> Union[Iterable[str], Mapping[str, Mapping[str, object]]]: |
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""" |
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Get the individuals from the keyword arguments. |
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Keyword arguments |
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----------------- |
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individuals : :class:`Union[Iterable[str], Mapping[str, Mapping[str, object]]]` |
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initial iterable of individual identifiers or a mapping from individual |
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identifiers to individual values |
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Raises |
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------ |
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TypeError |
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if the definition parameter is not of the correct type |
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.. versionadded:: 0.0.2 |
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""" |
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if 'individuals' in kwargs: |
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individuals = kwargs['individuals'] |
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if not isinstance(individuals, (Iterable, Mapping)): |
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raise TypeError |
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else: |
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individuals = None |
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return individuals |
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# pylint: disable=too-few-public-methods,abstract-method,super-init-not-called |
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class MemoryModel( |
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ContextHolder[MemoryContext], |
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AttributesHolder['MemoryAttribute'], |
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Model[MemoryContext, 'MemoryPopulation', 'MemoryAttribute'] |
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): |
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""" |
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The :class:`MemoryModel` class is designed to define models that resides in memory. It inherits |
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of all the behavior from the :class:`Model <galactic.context.Model>` class. |
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It's possible to change or to set attribute values. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals=['0', '1'] |
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... ) |
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>>> model = context.model |
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>>> model['mybool'] = int |
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>>> model['myint2'] = int |
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>>> print(context.population['0']) |
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{'mybool': 0, 'myint': 0, 'myint2': 0} |
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It's possible to delete an attribute using its name. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals=['0', '1'] |
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... ) |
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>>> model = context.model |
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>>> del model['mybool'] |
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>>> {ident: str(context.population[ident]) for ident in context.population} |
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{'0': "{'myint': 0}", '1': "{'myint': 0}"} |
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.. versionadded:: 0.0.1 |
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""" |
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def __init__( |
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self, |
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context: MemoryContext, |
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definition: Mapping[str, 'type'] |
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): |
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""" |
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Initialise a model in memory. |
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Parameters |
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---------- |
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context : :class:`MemoryContext` |
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the underlying context |
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definition : :class:`Mapping[str, type] <python:collections.abc.Mapping>` |
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the attributes definition |
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.. versionadded:: 0.0.1 |
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""" |
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super().__init__( |
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context=context, |
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attributes=[MemoryAttribute(self, name, cls) for name, cls in definition.items()] |
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) |
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def __delitem__(self, name: str): |
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""" |
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Delete an attribute from a :class:`MemoryModel`. |
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Parameters |
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---------- |
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name : :class:`str` |
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attribute name |
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Raises |
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------ |
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KeyError |
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if the attribute is not in the model |
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.. versionadded:: 0.0.1 |
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""" |
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super().__delitem__(name) |
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for identifier in self.population: |
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del self.population[identifier][name] |
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def __setitem__(self, name: str, cls: type): |
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""" |
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Set an attribute for a :class:`MemoryModel`. |
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Parameters |
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---------- |
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name : :class:`str` |
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the attribute name |
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cls : :class:`python:type` |
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the attribute type |
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.. versionadded:: 0.0.1 |
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""" |
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if name in self: |
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if self[name].type != cls: |
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super().__setitem__(name, MemoryAttribute(self, name, cls)) |
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for identifier in self.population: |
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try: |
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self.population[identifier][name] = cls(self.population[identifier][name]) |
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except (ValueError, TypeError): |
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self.population[identifier][name] = cls() |
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else: |
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super().__setitem__(name, MemoryAttribute(self, name, cls)) |
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for identifier in self.population: |
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self.population[identifier][name] = cls() |
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# pylint: disable=too-few-public-methods,abstract-method,super-init-not-called |
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class MemoryPopulation( |
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ContextHolder[MemoryContext], |
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IndividualsHolder['MemoryIndividual'], |
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Population[MemoryContext, MemoryModel, 'MemoryIndividual'] |
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): |
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""" |
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The :class:`MemoryPopulation` class is designed to define populations that resides in memory. It |
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inherits of all the behavior from the :class:`Population <galactic.context.Population>` class. |
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It's possible to change or to set individual values. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals=['0', '1'] |
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... ) |
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>>> population = context.population |
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>>> population['0'] = {'mybool': True} |
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>>> population['2'] = {'myint': 1} |
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>>> print(population['0']) |
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{'mybool': True, 'myint': 0} |
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>>> print(population['2']) |
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{'mybool': False, 'myint': 1} |
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It's possible to delete an individual using its identifier. |
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Example |
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------- |
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>>> from galactic.context.memory import MemoryContext |
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>>> context = MemoryContext( |
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... definition={'mybool': bool, 'myint': int}, |
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... individuals=['0', '1'] |
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... ) |
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>>> population = context.population |
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>>> del population['0'] |
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>>> {ident: str(context.population[ident]) for ident in context.population} |
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{'1': "{'mybool': False, 'myint': 0}"} |
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.. versionadded:: 0.0.1 |
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""" |
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def __init__( |
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self, |
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context: MemoryContext, |
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identifiers: Iterable[str] |
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): |
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""" |
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Initialise a population in memory. |
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Parameters |
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---------- |
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context : :class:`MemoryContext` |
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the underlying context |
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identifiers : :class:`Iterable[str] <python:collections.abc.Iterable>` |
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an iterable of identifiers |
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.. versionadded:: 0.0.1 |
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""" |
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super().__init__( |
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context=context, |
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individuals=[MemoryIndividual(self, identifier) for identifier in identifiers] |
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) |
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def __setitem__(self, identifier: str, values: Mapping[str, object]): |
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""" |
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Set an individual for a :class:`MemoryPopulation`. |
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Parameters |
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---------- |
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identifier : :class:`str` |
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the individual identifier |
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values : :class:`Mapping[str, object] <<python:collections.abc.mapping>>` |
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the initial values for some attributes |
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358
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Raises |
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359
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------ |
|
360
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KeyError |
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361
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if an attribute name does not belong to the underlying model. |
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ValueError |
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363
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if an attribute value does not correspond to its type |
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364
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365
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.. versionadded:: 0.0.1 |
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""" |
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367
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try: |
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368
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individual = self[identifier] |
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369
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except KeyError: |
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individual = MemoryIndividual(self, identifier) |
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super().__setitem__(identifier, individual) |
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for name, value in values.items(): |
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373
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if name not in self.model: |
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raise KeyError |
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375
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individual[name] = value |
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377
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378
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# pylint: disable=too-few-public-methods,abstract-method,super-init-not-called |
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379
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class MemoryIndividual( |
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380
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PopulationHolder[MemoryPopulation], |
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381
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ValuesHolder, |
|
382
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ConcreteIndividual, |
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383
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Individual[ |
|
384
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MemoryContext, |
|
385
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|
MemoryPopulation, |
|
386
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MemoryModel, |
|
387
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'MemoryIndividual', |
|
388
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|
'MemoryAttribute' |
|
389
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] |
|
390
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): |
|
391
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|
|
""" |
|
392
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|
|
The :class:`MemoryIndividual` is designed to define individuals that resides in memory. It |
|
393
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|
|
inherits of all the behavior from the :class:`Individual <galactic.context.Individual>` class. |
|
394
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|
395
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|
|
It's possible to modify a value for an individual using an attribute name. |
|
396
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|
397
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|
|
Example |
|
398
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------- |
|
399
|
|
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|
|
400
|
|
|
>>> from galactic.context.memory import MemoryContext |
|
401
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|
|
>>> context = MemoryContext( |
|
402
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|
|
... definition={'mybool': bool, 'myint': int}, |
|
403
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|
|
... individuals=['0', '1'] |
|
404
|
|
|
... ) |
|
405
|
|
|
>>> individual = context.population['0'] |
|
406
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|
|
>>> individual['mybool'] = True |
|
407
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|
|
>>> individual['myint'] = 1 |
|
408
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|
|
>>> {ident: str(context.population[ident]) for ident in context.population} |
|
409
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|
|
{'0': "{'mybool': True, 'myint': 1}", '1': "{'mybool': False, 'myint': 0}"} |
|
410
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|
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|
|
411
|
|
|
.. versionadded:: 0.0.1 |
|
412
|
|
|
""" |
|
413
|
|
|
|
|
414
|
|
|
def __init__( |
|
415
|
|
|
self, |
|
416
|
|
|
population: MemoryPopulation, |
|
417
|
|
|
identifier: str |
|
418
|
|
|
): |
|
419
|
|
|
""" |
|
420
|
|
|
Initialise an individual. |
|
421
|
|
|
|
|
422
|
|
|
Parameters |
|
423
|
|
|
---------- |
|
424
|
|
|
population : :class:`MemoryPopulation` |
|
425
|
|
|
the population |
|
426
|
|
|
identifier : :class:`str` |
|
427
|
|
|
the individual identifier |
|
428
|
|
|
|
|
429
|
|
|
.. versionadded:: 0.0.1 |
|
430
|
|
|
""" |
|
431
|
|
|
super().__init__( |
|
432
|
|
|
population=population, |
|
433
|
|
|
identifier=identifier, |
|
434
|
|
|
values={name: attribute.type() for name, attribute in population.model.items()} |
|
435
|
|
|
) |
|
436
|
|
|
|
|
437
|
|
|
def __setitem__(self, name: str, value): |
|
438
|
|
|
""" |
|
439
|
|
|
Set an individual's attribute value using either the attribute or its name. |
|
440
|
|
|
|
|
441
|
|
|
Parameters |
|
442
|
|
|
---------- |
|
443
|
|
|
name: :class:`str` |
|
444
|
|
|
the attribute name |
|
445
|
|
|
value : :class:`object` |
|
446
|
|
|
the value |
|
447
|
|
|
|
|
448
|
|
|
Raises |
|
449
|
|
|
------ |
|
450
|
|
|
KeyError |
|
451
|
|
|
if the attribute does not belong to the underlying context |
|
452
|
|
|
ValueError |
|
453
|
|
|
if the value passed in argument has its type different of the attribute type |
|
454
|
|
|
|
|
455
|
|
|
.. versionadded:: 0.0.1 |
|
456
|
|
|
""" |
|
457
|
|
|
attribute = self.model[name] |
|
458
|
|
|
if not isinstance(value, attribute.type): |
|
459
|
|
|
value = attribute.type(value) |
|
460
|
|
|
super().__setitem__(name, value) |
|
461
|
|
|
|
|
462
|
|
|
def __delitem__(self, name: str): |
|
463
|
|
|
""" |
|
464
|
|
|
Delete an individual value. |
|
465
|
|
|
|
|
466
|
|
|
Parameters |
|
467
|
|
|
---------- |
|
468
|
|
|
name: :class:`str` |
|
469
|
|
|
the attribute name |
|
470
|
|
|
|
|
471
|
|
|
Raises |
|
472
|
|
|
------ |
|
473
|
|
|
ValueError |
|
474
|
|
|
if the attribute is in the model (which should be always the case) |
|
475
|
|
|
|
|
476
|
|
|
.. versionadded:: 0.0.1 |
|
477
|
|
|
""" |
|
478
|
|
|
if name in self.model: |
|
479
|
|
|
raise ValueError |
|
480
|
|
|
else: |
|
481
|
|
|
super().__delitem__(name) |
|
482
|
|
|
|
|
483
|
|
|
|
|
484
|
|
|
# pylint: disable=too-few-public-methods,abstract-method,super-init-not-called |
|
485
|
|
|
class MemoryAttribute( |
|
486
|
|
|
ModelHolder[MemoryModel], |
|
487
|
|
|
ConcreteAttribute, |
|
488
|
|
|
Attribute[ |
|
489
|
|
|
MemoryContext, |
|
490
|
|
|
MemoryPopulation, |
|
491
|
|
|
MemoryModel, |
|
492
|
|
|
MemoryIndividual, |
|
493
|
|
|
'MemoryAttribute' |
|
494
|
|
|
] |
|
495
|
|
|
): |
|
496
|
|
|
""" |
|
497
|
|
|
The :class:`MemoryAttribute` is designed to define attributes that resides in memory. It |
|
498
|
|
|
inherits of all the behavior from the :class:`Attribute <galactic.context.Attribute>` class. |
|
499
|
|
|
|
|
500
|
|
|
It's possible to modify a value for an attribute using an individual identifier. |
|
501
|
|
|
|
|
502
|
|
|
Example |
|
503
|
|
|
------- |
|
504
|
|
|
|
|
505
|
|
|
>>> from galactic.context.memory import MemoryContext |
|
506
|
|
|
>>> context = MemoryContext( |
|
507
|
|
|
... definition={'mybool': bool, 'myint': int}, |
|
508
|
|
|
... individuals=['0', '1'] |
|
509
|
|
|
... ) |
|
510
|
|
|
>>> attribute = context.model['myint'] |
|
511
|
|
|
>>> attribute['0'] = 3 |
|
512
|
|
|
>>> attribute['1'] = 4 |
|
513
|
|
|
>>> {ident: str(context.population[ident]) for ident in context.population} |
|
514
|
|
|
{'0': "{'mybool': False, 'myint': 3}", '1': "{'mybool': False, 'myint': 4}"} |
|
515
|
|
|
|
|
516
|
|
|
.. versionadded:: 0.0.1 |
|
517
|
|
|
""" |
|
518
|
|
|
|
|
519
|
|
|
def __init__( |
|
520
|
|
|
self, |
|
521
|
|
|
model: MemoryModel, |
|
522
|
|
|
name: str, |
|
523
|
|
|
cls: 'type' |
|
524
|
|
|
): |
|
525
|
|
|
""" |
|
526
|
|
|
Initialise an attribute. |
|
527
|
|
|
|
|
528
|
|
|
Parameters |
|
529
|
|
|
---------- |
|
530
|
|
|
model : :class:`MemoryModel` |
|
531
|
|
|
the underlying model |
|
532
|
|
|
name : :class:`str` |
|
533
|
|
|
the attribute name |
|
534
|
|
|
cls : :class:`type <python:type>` |
|
535
|
|
|
the attribute type |
|
536
|
|
|
|
|
537
|
|
|
.. versionadded:: 0.0.1 |
|
538
|
|
|
""" |
|
539
|
|
|
super().__init__( |
|
540
|
|
|
model=model, |
|
541
|
|
|
name=name, |
|
542
|
|
|
type=cls |
|
543
|
|
|
) |
|
544
|
|
|
|
|
545
|
|
|
def __setitem__(self, identifier: str, value): |
|
546
|
|
|
""" |
|
547
|
|
|
Set an individual's attribute value using either the individual or its identifier. |
|
548
|
|
|
|
|
549
|
|
|
This method raises a :class:`KeyError` exception if the attribute does not belong to |
|
550
|
|
|
the underlying context and a :class:`ValueError` exception if the value passed in argument |
|
551
|
|
|
has its type different of the attribute type. |
|
552
|
|
|
|
|
553
|
|
|
Parameters |
|
554
|
|
|
---------- |
|
555
|
|
|
identifier : :class:`str` |
|
556
|
|
|
the individual identifier |
|
557
|
|
|
value : :class:`object` |
|
558
|
|
|
the value |
|
559
|
|
|
|
|
560
|
|
|
Raises |
|
561
|
|
|
------ |
|
562
|
|
|
KeyError |
|
563
|
|
|
if the individual does not exists |
|
564
|
|
|
ValueError |
|
565
|
|
|
if the value is not of the attribute type |
|
566
|
|
|
|
|
567
|
|
|
.. versionadded:: 0.0.1 |
|
568
|
|
|
""" |
|
569
|
|
|
self.population[identifier][self.name] = value |
|
570
|
|
|
|