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# -*- coding: utf-8 -*- |
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""" |
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Updated `conda-api` to include additional methods, queued worker processes |
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calling `QProcess` instead of `subprocess.Popen`. |
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""" |
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# Standard library imports |
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from os.path import basename, isdir, join |
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from collections import deque |
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import json |
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import os |
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import platform |
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import re |
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import sys |
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import time |
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import yaml |
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# Third party imports |
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from qtpy.QtCore import QByteArray, QObject, QProcess, QTimer, Signal |
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# Local imports |
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from conda_manager.utils.findpip import PIP_LIST_SCRIPT |
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from conda_manager.utils.logs import logger |
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__version__ = '1.3.0' |
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# --- Errors |
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# ----------------------------------------------------------------------------- |
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class PipError(Exception): |
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"""General pip error.""" |
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pass |
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class CondaError(Exception): |
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"""General Conda error.""" |
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pass |
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class CondaProcessWorker(CondaError): |
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"""General Conda error.""" |
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pass |
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class CondaEnvExistsError(CondaError): |
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"""Conda environment already exists.""" |
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pass |
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# --- Helpers |
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# ----------------------------------------------------------------------------- |
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PY2 = sys.version[0] == '2' |
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PY3 = sys.version[0] == '3' |
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DEBUG = False |
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def to_text_string(obj, encoding=None): |
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"""Convert `obj` to (unicode) text string.""" |
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if PY2: |
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# Python 2 |
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if encoding is None: |
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return unicode(obj) |
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else: |
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return unicode(obj, encoding) |
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else: |
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# Python 3 |
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if encoding is None: |
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return str(obj) |
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elif isinstance(obj, str): |
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# In case this function is not used properly, this could happen |
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return obj |
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else: |
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return str(obj, encoding) |
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def handle_qbytearray(obj, encoding): |
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""" |
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Qt/Python3 compatibility helper. |
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""" |
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if isinstance(obj, QByteArray): |
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obj = obj.data() |
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return to_text_string(obj, encoding=encoding) |
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class ProcessWorker(QObject): |
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""" |
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""" |
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sig_finished = Signal(object, object, object) |
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sig_partial = Signal(object, object, object) |
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def __init__(self, cmd_list, parse=False, pip=False, callback=None, |
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extra_kwargs={}): |
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super(ProcessWorker, self).__init__() |
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self._result = None |
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self._cmd_list = cmd_list |
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self._parse = parse |
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self._pip = pip |
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self._conda = not pip |
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self._callback = callback |
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self._fired = False |
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self._communicate_first = False |
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self._partial_stdout = None |
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self._extra_kwargs = extra_kwargs |
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self._timer = QTimer() |
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self._process = QProcess() |
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self._timer.setInterval(150) |
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self._timer.timeout.connect(self._communicate) |
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# self._process.finished.connect(self._communicate) |
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self._process.readyReadStandardOutput.connect(self._partial) |
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def _partial(self): |
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raw_stdout = self._process.readAllStandardOutput() |
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stdout = handle_qbytearray(raw_stdout, _CondaAPI.UTF8) |
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json_stdout = stdout.replace('\n\x00', '') |
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try: |
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json_stdout = json.loads(json_stdout) |
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except Exception: |
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json_stdout = stdout |
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if self._partial_stdout is None: |
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self._partial_stdout = stdout |
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else: |
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self._partial_stdout += stdout |
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self.sig_partial.emit(self, json_stdout, None) |
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def _communicate(self): |
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""" |
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""" |
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if not self._communicate_first: |
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if self._process.state() == QProcess.NotRunning: |
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self.communicate() |
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elif self._fired: |
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self._timer.stop() |
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def communicate(self): |
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""" |
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""" |
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self._communicate_first = True |
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self._process.waitForFinished() |
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if self._partial_stdout is None: |
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raw_stdout = self._process.readAllStandardOutput() |
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stdout = handle_qbytearray(raw_stdout, _CondaAPI.UTF8) |
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else: |
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stdout = self._partial_stdout |
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raw_stderr = self._process.readAllStandardError() |
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stderr = handle_qbytearray(raw_stderr, _CondaAPI.UTF8) |
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result = [stdout.encode(_CondaAPI.UTF8), stderr.encode(_CondaAPI.UTF8)] |
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# FIXME: Why does anaconda client print to stderr??? |
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if PY2: |
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stderr = stderr.decode() |
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if 'using anaconda cloud api site' not in stderr.lower(): |
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if stderr.strip() and self._conda: |
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raise Exception('{0}:\n' |
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'STDERR:\n{1}\nEND' |
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''.format(' '.join(self._cmd_list), |
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stderr)) |
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# elif stderr.strip() and self._pip: |
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# raise PipError(self._cmd_list) |
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else: |
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result[-1] = '' |
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if self._parse and stdout: |
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try: |
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result = json.loads(stdout), result[-1] |
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except ValueError as error: |
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result = stdout, error |
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if 'error' in result[0]: |
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error = '{0}: {1}'.format(" ".join(self._cmd_list), |
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result[0]['error']) |
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result = result[0], error |
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if self._callback: |
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result = self._callback(result[0], result[-1], |
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**self._extra_kwargs), result[-1] |
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self._result = result |
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self.sig_finished.emit(self, result[0], result[-1]) |
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if result[-1]: |
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logger.error(str(('error', result[-1]))) |
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self._fired = True |
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return result |
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def close(self): |
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""" |
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""" |
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self._process.close() |
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def is_finished(self): |
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""" |
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""" |
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return self._process.state() == QProcess.NotRunning and self._fired |
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def start(self): |
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""" |
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""" |
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logger.debug(str(' '.join(self._cmd_list))) |
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if not self._fired: |
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self._partial_ouput = None |
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self._process.start(self._cmd_list[0], self._cmd_list[1:]) |
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self._timer.start() |
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else: |
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raise CondaProcessWorker('A Conda ProcessWorker can only run once ' |
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'per method call.') |
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# --- API |
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# ----------------------------------------------------------------------------- |
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class _CondaAPI(QObject): |
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""" |
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""" |
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ROOT_PREFIX = None |
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ENCODING = 'ascii' |
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UTF8 = 'utf-8' |
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DEFAULT_CHANNELS = ['https://repo.continuum.io/pkgs/pro', |
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'https://repo.continuum.io/pkgs/free'] |
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def __init__(self, parent=None): |
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super(_CondaAPI, self).__init__() |
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self._parent = parent |
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self._queue = deque() |
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self._timer = QTimer() |
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self._current_worker = None |
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self._workers = [] |
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self._timer.setInterval(1000) |
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self._timer.timeout.connect(self._clean) |
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self.set_root_prefix() |
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def _clean(self): |
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""" |
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Periodically check for inactive workers and remove their references. |
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""" |
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if self._workers: |
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for w in self._workers: |
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if w.is_finished(): |
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self._workers.remove(w) |
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else: |
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self._current_worker = None |
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self._timer.stop() |
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def _start(self): |
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""" |
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""" |
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if len(self._queue) == 1: |
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self._current_worker = self._queue.popleft() |
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self._workers.append(self._current_worker) |
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self._current_worker.start() |
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self._timer.start() |
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def is_active(self): |
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""" |
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Check if a worker is still active. |
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""" |
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return len(self._workers) == 0 |
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def terminate_all_processes(self): |
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""" |
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Kill all working processes. |
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""" |
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for worker in self._workers: |
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worker.close() |
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# --- Conda api |
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# ------------------------------------------------------------------------- |
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def _call_conda(self, extra_args, abspath=True, parse=False, |
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callback=None): |
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""" |
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Call conda with the list of extra arguments, and return the worker. |
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The result can be force by calling worker.communicate(), which returns |
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the tuple (stdout, stderr). |
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""" |
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if abspath: |
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if sys.platform == 'win32': |
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python = join(self.ROOT_PREFIX, 'python.exe') |
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conda = join(self.ROOT_PREFIX, 'Scripts', |
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'conda-script.py') |
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else: |
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python = join(self.ROOT_PREFIX, 'bin/python') |
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conda = join(self.ROOT_PREFIX, 'bin/conda') |
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cmd_list = [python, conda] |
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else: |
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# Just use whatever conda is on the path |
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cmd_list = ['conda'] |
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cmd_list.extend(extra_args) |
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process_worker = ProcessWorker(cmd_list, parse=parse, |
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callback=callback) |
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process_worker.sig_finished.connect(self._start) |
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self._queue.append(process_worker) |
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self._start() |
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return process_worker |
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def _call_and_parse(self, extra_args, abspath=True, callback=None): |
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""" |
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""" |
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return self._call_conda(extra_args, abspath=abspath, parse=True, |
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callback=callback) |
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def _setup_install_commands_from_kwargs(self, kwargs, keys=tuple()): |
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cmd_list = [] |
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if kwargs.get('override_channels', False) and 'channel' not in kwargs: |
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raise TypeError('conda search: override_channels requires channel') |
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if 'env' in kwargs: |
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cmd_list.extend(['--name', kwargs.pop('env')]) |
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if 'prefix' in kwargs: |
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cmd_list.extend(['--prefix', kwargs.pop('prefix')]) |
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if 'channel' in kwargs: |
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channel = kwargs.pop('channel') |
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if isinstance(channel, str): |
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cmd_list.extend(['--channel', channel]) |
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else: |
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cmd_list.append('--channel') |
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cmd_list.extend(channel) |
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for key in keys: |
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if key in kwargs and kwargs[key]: |
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cmd_list.append('--' + key.replace('_', '-')) |
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return cmd_list |
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def set_root_prefix(self, prefix=None): |
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""" |
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Set the prefix to the root environment (default is /opt/anaconda). |
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This function should only be called once (right after importing |
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conda_api). |
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""" |
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if prefix: |
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self.ROOT_PREFIX = prefix |
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else: |
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# Find some conda instance, and then use info to get 'root_prefix' |
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worker = self._call_and_parse(['info', '--json'], abspath=False) |
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info = worker.communicate()[0] |
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self.ROOT_PREFIX = info['root_prefix'] |
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def get_conda_version(self): |
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""" |
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Return the version of conda being used (invoked) as a string. |
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""" |
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return self._call_conda(['--version'], |
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callback=self._get_conda_version) |
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def _get_conda_version(self, stdout, stderr): |
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# argparse outputs version to stderr in Python < 3.4. |
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# http://bugs.python.org/issue18920 |
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pat = re.compile(r'conda:?\s+(\d+\.\d\S+|unknown)') |
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m = pat.match(stderr.decode().strip()) |
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if m is None: |
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m = pat.match(stdout.decode().strip()) |
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if m is None: |
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raise Exception('output did not match: {0}'.format(stderr)) |
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return m.group(1) |
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def get_envs(self): |
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""" |
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Return all of the (named) environment (this does not include the root |
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environment), as a list of absolute path to their prefixes. |
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""" |
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logger.debug('') |
381
|
|
|
# return self._call_and_parse(['info', '--json'], |
382
|
|
|
# callback=lambda o, e: o['envs']) |
383
|
|
|
envs = os.listdir(os.sep.join([self.ROOT_PREFIX, 'envs'])) |
384
|
|
|
envs = [os.sep.join([self.ROOT_PREFIX, 'envs', i]) for i in envs] |
385
|
|
|
|
386
|
|
|
valid_envs = [e for e in envs if os.path.isdir(e) and |
387
|
|
|
self.environment_exists(prefix=e)] |
388
|
|
|
|
389
|
|
|
return valid_envs |
390
|
|
|
|
391
|
|
|
def get_prefix_envname(self, name): |
392
|
|
|
""" |
393
|
|
|
Given the name of an environment return its full prefix path, or None |
394
|
|
|
if it cannot be found. |
395
|
|
|
""" |
396
|
|
|
prefix = None |
397
|
|
|
if name == 'root': |
398
|
|
|
prefix = self.ROOT_PREFIX |
399
|
|
|
|
400
|
|
|
# envs, error = self.get_envs().communicate() |
401
|
|
|
envs = self.get_envs() |
402
|
|
|
for p in envs: |
403
|
|
|
if basename(p) == name: |
404
|
|
|
prefix = p |
405
|
|
|
|
406
|
|
|
return prefix |
407
|
|
|
|
408
|
|
|
def linked(self, prefix): |
409
|
|
|
""" |
410
|
|
|
Return the (set of canonical names) of linked packages in `prefix`. |
411
|
|
|
""" |
412
|
|
|
logger.debug(str(prefix)) |
413
|
|
|
|
414
|
|
|
if not isdir(prefix): |
415
|
|
|
raise Exception('no such directory: {0}'.format(prefix)) |
416
|
|
|
|
417
|
|
|
meta_dir = join(prefix, 'conda-meta') |
418
|
|
|
if not isdir(meta_dir): |
419
|
|
|
# We might have nothing in linked (and no conda-meta directory) |
420
|
|
|
return set() |
421
|
|
|
|
422
|
|
|
return set(fn[:-5] for fn in os.listdir(meta_dir) |
423
|
|
|
if fn.endswith('.json')) |
424
|
|
|
|
425
|
|
|
def split_canonical_name(self, cname): |
426
|
|
|
""" |
427
|
|
|
Split a canonical package name into (name, version, build) strings. |
428
|
|
|
""" |
429
|
|
|
return tuple(cname.rsplit('-', 2)) |
430
|
|
|
|
431
|
|
|
def info(self, abspath=True): |
432
|
|
|
""" |
433
|
|
|
Return a dictionary with configuration information. |
434
|
|
|
No guarantee is made about which keys exist. Therefore this function |
435
|
|
|
should only be used for testing and debugging. |
436
|
|
|
""" |
437
|
|
|
logger.debug(str('')) |
438
|
|
|
return self._call_and_parse(['info', '--json'], abspath=abspath) |
439
|
|
|
|
440
|
|
|
def package_info(self, package, abspath=True): |
441
|
|
|
""" |
442
|
|
|
Return a dictionary with package information. |
443
|
|
|
""" |
444
|
|
|
return self._call_and_parse(['info', package, '--json'], |
445
|
|
|
abspath=abspath) |
446
|
|
|
|
447
|
|
View Code Duplication |
def search(self, regex=None, spec=None, **kwargs): |
|
|
|
|
448
|
|
|
""" |
449
|
|
|
Search for packages. |
450
|
|
|
""" |
451
|
|
|
cmd_list = ['search', '--json'] |
452
|
|
|
|
453
|
|
|
if regex and spec: |
454
|
|
|
raise TypeError('conda search: only one of regex or spec allowed') |
455
|
|
|
|
456
|
|
|
if regex: |
457
|
|
|
cmd_list.append(regex) |
458
|
|
|
|
459
|
|
|
if spec: |
460
|
|
|
cmd_list.extend(['--spec', spec]) |
461
|
|
|
|
462
|
|
|
if 'platform' in kwargs: |
463
|
|
|
cmd_list.extend(['--platform', kwargs.pop('platform')]) |
464
|
|
|
|
465
|
|
|
cmd_list.extend( |
466
|
|
|
self._setup_install_commands_from_kwargs( |
467
|
|
|
kwargs, |
468
|
|
|
('canonical', 'unknown', 'use_index_cache', 'outdated', |
469
|
|
|
'override_channels'))) |
470
|
|
|
|
471
|
|
|
return self._call_and_parse(cmd_list, |
472
|
|
|
abspath=kwargs.get('abspath', True)) |
473
|
|
|
|
474
|
|
|
|
475
|
|
|
def create_from_yaml(self, name, yamlfile): |
476
|
|
|
""" |
477
|
|
|
Create new environment using conda-env to allow creation to a yaml spec. |
478
|
|
|
|
479
|
|
|
Unlike other methods, this calls conda-env, and requires a named |
480
|
|
|
environment and uses channels as defined in rcfiles. |
481
|
|
|
|
482
|
|
|
Parameters |
483
|
|
|
---------- |
484
|
|
|
name : string |
485
|
|
|
Environment name |
486
|
|
|
yamlfile : string |
487
|
|
|
Path to yaml file with package spec (as created by conda env export |
488
|
|
|
""" |
489
|
|
|
logger.debug(str((name, yamlfile))) |
490
|
|
|
cmd_list = ['env', 'create', '-n', name, '-f', yamlfile] |
491
|
|
|
return self._call_and_parse(cmd_list) |
492
|
|
|
|
493
|
|
|
def create(self, name=None, prefix=None, pkgs=None, channels=None): |
494
|
|
|
""" |
495
|
|
|
Create an environment either by name or path with a specified set of |
496
|
|
|
packages. |
497
|
|
|
""" |
498
|
|
|
logger.debug(str((prefix, pkgs, channels))) |
499
|
|
|
|
500
|
|
|
# TODO: Fix temporal hack |
501
|
|
|
if not pkgs or not isinstance(pkgs, (list, tuple, str)): |
502
|
|
|
raise TypeError('must specify a list of one or more packages to ' |
503
|
|
|
'install into new environment') |
504
|
|
|
|
505
|
|
|
cmd_list = ['create', '--yes', '--quiet', '--json', '--mkdir'] |
506
|
|
|
if name: |
507
|
|
|
ref = name |
508
|
|
|
search = [os.path.join(d, name) for d in |
509
|
|
|
self.info().communicate()[0]['envs_dirs']] |
510
|
|
|
cmd_list.extend(['--name', name]) |
511
|
|
|
elif prefix: |
512
|
|
|
ref = prefix |
513
|
|
|
search = [prefix] |
514
|
|
|
cmd_list.extend(['--prefix', prefix]) |
515
|
|
|
else: |
516
|
|
|
raise TypeError('must specify either an environment name or a ' |
517
|
|
|
'path for new environment') |
518
|
|
|
|
519
|
|
|
if any(os.path.exists(prefix) for prefix in search): |
520
|
|
|
raise CondaEnvExistsError('Conda environment {0} already ' |
521
|
|
|
'exists'.format(ref)) |
522
|
|
|
|
523
|
|
|
# TODO: Fix temporal hack |
524
|
|
|
if isinstance(pkgs, (list, tuple)): |
525
|
|
|
cmd_list.extend(pkgs) |
526
|
|
|
elif isinstance(pkgs, str): |
527
|
|
|
cmd_list.extend(['--file', pkgs]) |
528
|
|
|
|
529
|
|
|
# TODO: Check if correct |
530
|
|
|
if channels: |
531
|
|
|
cmd_list.extend(['--override-channels']) |
532
|
|
|
|
533
|
|
|
for channel in channels: |
534
|
|
|
cmd_list.extend(['--channel']) |
535
|
|
|
cmd_list.extend([channel]) |
536
|
|
|
|
537
|
|
|
return self._call_and_parse(cmd_list) |
538
|
|
|
|
539
|
|
|
def parse_token_channel(self, channel, token): |
540
|
|
|
""" |
541
|
|
|
Adapt a channel to include the authentication token of the logged |
542
|
|
|
user. |
543
|
|
|
|
544
|
|
|
Ignore default channels |
545
|
|
|
""" |
546
|
|
|
if token and channel not in self.DEFAULT_CHANNELS: |
547
|
|
|
url_parts = channel.split('/') |
548
|
|
|
start = url_parts[:-1] |
549
|
|
|
middle = 't/{0}'.format(token) |
550
|
|
|
end = url_parts[-1] |
551
|
|
|
token_channel = '{0}/{1}/{2}'.format('/'.join(start), middle, end) |
552
|
|
|
return token_channel |
553
|
|
|
else: |
554
|
|
|
return channel |
555
|
|
|
|
556
|
|
|
def install(self, name=None, prefix=None, pkgs=None, dep=True, |
557
|
|
|
channels=None, token=None): |
558
|
|
|
""" |
559
|
|
|
Install packages into an environment either by name or path with a |
560
|
|
|
specified set of packages. |
561
|
|
|
|
562
|
|
|
If token is specified, the channels different from the defaults will |
563
|
|
|
get the token appended. |
564
|
|
|
""" |
565
|
|
|
logger.debug(str((prefix, pkgs, channels))) |
566
|
|
|
|
567
|
|
|
# TODO: Fix temporal hack |
568
|
|
|
if not pkgs or not isinstance(pkgs, (list, tuple, str)): |
569
|
|
|
raise TypeError('must specify a list of one or more packages to ' |
570
|
|
|
'install into existing environment') |
571
|
|
|
|
572
|
|
|
cmd_list = ['install', '--yes', '--json', '--force-pscheck'] |
573
|
|
|
if name: |
574
|
|
|
cmd_list.extend(['--name', name]) |
575
|
|
|
elif prefix: |
576
|
|
|
cmd_list.extend(['--prefix', prefix]) |
577
|
|
|
else: |
578
|
|
|
# Just install into the current environment, whatever that is |
579
|
|
|
pass |
580
|
|
|
|
581
|
|
|
# TODO: Check if correct |
582
|
|
|
if channels: |
583
|
|
|
cmd_list.extend(['--override-channels']) |
584
|
|
|
|
585
|
|
|
for channel in channels: |
586
|
|
|
cmd_list.extend(['--channel']) |
587
|
|
|
channel = self.parse_token_channel(channel, token) |
588
|
|
|
cmd_list.extend([channel]) |
589
|
|
|
|
590
|
|
|
# TODO: Fix temporal hack |
591
|
|
|
if isinstance(pkgs, (list, tuple)): |
592
|
|
|
cmd_list.extend(pkgs) |
593
|
|
|
elif isinstance(pkgs, str): |
594
|
|
|
cmd_list.extend(['--file', pkgs]) |
595
|
|
|
|
596
|
|
|
if not dep: |
597
|
|
|
cmd_list.extend(['--no-deps']) |
598
|
|
|
|
599
|
|
|
return self._call_and_parse(cmd_list) |
600
|
|
|
|
601
|
|
|
def update(self, *pkgs, **kwargs): |
602
|
|
|
""" |
603
|
|
|
Update package(s) (in an environment) by name. |
604
|
|
|
""" |
605
|
|
|
cmd_list = ['update', '--json', '--quiet', '--yes'] |
606
|
|
|
|
607
|
|
|
if not pkgs and not kwargs.get('all'): |
608
|
|
|
raise TypeError("Must specify at least one package to update, or " |
609
|
|
|
"all=True.") |
610
|
|
|
|
611
|
|
|
cmd_list.extend( |
612
|
|
|
self._setup_install_commands_from_kwargs( |
613
|
|
|
kwargs, |
614
|
|
|
('dry_run', 'no_deps', 'override_channels', |
615
|
|
|
'no_pin', 'force', 'all', 'use_index_cache', 'use_local', |
616
|
|
|
'alt_hint'))) |
617
|
|
|
|
618
|
|
|
cmd_list.extend(pkgs) |
619
|
|
|
|
620
|
|
|
return self._call_and_parse(cmd_list, abspath=kwargs.get('abspath', |
621
|
|
|
True)) |
622
|
|
|
|
623
|
|
|
def remove(self, name=None, prefix=None, pkgs=None, all_=False): |
624
|
|
|
""" |
625
|
|
|
Remove a package (from an environment) by name. |
626
|
|
|
|
627
|
|
|
Returns { |
628
|
|
|
success: bool, (this is always true), |
629
|
|
|
(other information) |
630
|
|
|
} |
631
|
|
|
""" |
632
|
|
|
logger.debug(str((prefix, pkgs))) |
633
|
|
|
|
634
|
|
|
cmd_list = ['remove', '--json', '--quiet', '--yes'] |
635
|
|
|
|
636
|
|
|
if not pkgs and not all_: |
637
|
|
|
raise TypeError("Must specify at least one package to remove, or " |
638
|
|
|
"all=True.") |
639
|
|
|
|
640
|
|
|
if name: |
641
|
|
|
cmd_list.extend(['--name', name]) |
642
|
|
|
elif prefix: |
643
|
|
|
cmd_list.extend(['--prefix', prefix]) |
644
|
|
View Code Duplication |
else: |
|
|
|
|
645
|
|
|
raise TypeError('must specify either an environment name or a ' |
646
|
|
|
'path for package removal') |
647
|
|
|
|
648
|
|
|
if all_: |
649
|
|
|
cmd_list.extend(['--all']) |
650
|
|
|
else: |
651
|
|
|
cmd_list.extend(pkgs) |
652
|
|
|
|
653
|
|
|
return self._call_and_parse(cmd_list) |
654
|
|
|
|
655
|
|
|
def remove_environment(self, name=None, path=None, **kwargs): |
656
|
|
|
""" |
657
|
|
|
Remove an environment entirely. |
658
|
|
|
|
659
|
|
|
See ``remove``. |
660
|
|
|
""" |
661
|
|
|
return self.remove(name=name, path=path, all=True, **kwargs) |
662
|
|
|
|
663
|
|
|
def clone_environment(self, clone, name=None, prefix=None, **kwargs): |
664
|
|
|
""" |
665
|
|
|
Clone the environment `clone` into `name` or `prefix`. |
666
|
|
|
""" |
667
|
|
|
cmd_list = ['create', '--json', '--quiet'] |
668
|
|
|
|
669
|
|
|
if (name and prefix) or not (name or prefix): |
670
|
|
|
raise TypeError("conda clone_environment: exactly one of `name` " |
671
|
|
|
"or `path` required") |
672
|
|
|
|
673
|
|
|
if name: |
674
|
|
|
cmd_list.extend(['--name', name]) |
675
|
|
|
|
676
|
|
|
if prefix: |
677
|
|
|
cmd_list.extend(['--prefix', prefix]) |
678
|
|
|
|
679
|
|
|
cmd_list.extend(['--clone', clone]) |
680
|
|
|
|
681
|
|
|
cmd_list.extend( |
682
|
|
|
self._setup_install_commands_from_kwargs( |
683
|
|
|
kwargs, |
684
|
|
|
('dry_run', 'unknown', 'use_index_cache', 'use_local', |
685
|
|
|
'no_pin', 'force', 'all', 'channel', 'override_channels', |
686
|
|
|
'no_default_packages'))) |
687
|
|
|
|
688
|
|
|
return self._call_and_parse(cmd_list, abspath=kwargs.get('abspath', |
689
|
|
|
True)) |
690
|
|
|
|
691
|
|
|
# FIXME: |
692
|
|
|
def process(self, name=None, prefix=None, cmd=None): |
693
|
|
|
""" |
694
|
|
|
Create a Popen process for cmd using the specified args but in the |
695
|
|
|
conda environment specified by name or prefix. |
696
|
|
|
|
697
|
|
|
The returned object will need to be invoked with p.communicate() or |
698
|
|
|
similar. |
699
|
|
|
""" |
700
|
|
|
if bool(name) == bool(prefix): |
701
|
|
|
raise TypeError('exactly one of name or prefix must be specified') |
702
|
|
|
|
703
|
|
|
if not cmd: |
704
|
|
|
raise TypeError('cmd to execute must be specified') |
705
|
|
|
|
706
|
|
|
if not args: |
707
|
|
|
args = [] |
708
|
|
|
|
709
|
|
|
if name: |
710
|
|
|
prefix = self.get_prefix_envname(name) |
711
|
|
|
|
712
|
|
|
conda_env = dict(os.environ) |
713
|
|
|
sep = os.pathsep |
714
|
|
|
|
715
|
|
|
if sys.platform == 'win32': |
716
|
|
|
conda_env['PATH'] = join(prefix, |
717
|
|
|
'Scripts') + sep + conda_env['PATH'] |
718
|
|
|
else: |
719
|
|
|
# Unix |
720
|
|
|
conda_env['PATH'] = join(prefix, 'bin') + sep + conda_env['PATH'] |
721
|
|
|
|
722
|
|
|
conda_env['PATH'] = prefix + os.pathsep + conda_env['PATH'] |
723
|
|
|
|
724
|
|
|
cmd_list = [cmd] |
725
|
|
|
cmd_list.extend(args) |
726
|
|
|
|
727
|
|
|
# = self.subprocess.process(cmd_list, env=conda_env, stdin=stdin, |
728
|
|
|
# stdout=stdout, stderr=stderr) |
729
|
|
|
|
730
|
|
|
def _setup_config_from_kwargs(self, kwargs): |
731
|
|
|
cmd_list = ['--json', '--force'] |
732
|
|
|
|
733
|
|
|
if 'file' in kwargs: |
734
|
|
|
cmd_list.extend(['--file', kwargs['file']]) |
735
|
|
|
|
736
|
|
|
if 'system' in kwargs: |
737
|
|
|
cmd_list.append('--system') |
738
|
|
|
|
739
|
|
|
return cmd_list |
740
|
|
|
|
741
|
|
|
def config_path(self, **kwargs): |
742
|
|
|
""" |
743
|
|
|
Get the path to the config file. |
744
|
|
|
""" |
745
|
|
|
cmd_list = ['config', '--get'] |
746
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
747
|
|
|
|
748
|
|
|
return self._call_and_parse(cmd_list, |
749
|
|
|
abspath=kwargs.get('abspath', True), |
750
|
|
|
callback=lambda o, e: o['rc_path']) |
751
|
|
|
|
752
|
|
|
def config_get(self, *keys, **kwargs): |
753
|
|
|
""" |
754
|
|
|
Get the values of configuration keys. |
755
|
|
|
|
756
|
|
|
Returns a dictionary of values. Note, the key may not be in the |
757
|
|
|
dictionary if the key wasn't set in the configuration file. |
758
|
|
|
""" |
759
|
|
|
cmd_list = ['config', '--get'] |
760
|
|
|
cmd_list.extend(keys) |
761
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
762
|
|
|
|
763
|
|
|
return self._call_and_parse(cmd_list, |
764
|
|
|
abspath=kwargs.get('abspath', True), |
765
|
|
|
callback=lambda o, e: o['get']) |
766
|
|
|
|
767
|
|
|
def config_set(self, key, value, **kwargs): |
768
|
|
|
""" |
769
|
|
|
Set a key to a (bool) value. |
770
|
|
|
|
771
|
|
|
Returns a list of warnings Conda may have emitted. |
772
|
|
|
""" |
773
|
|
|
cmd_list = ['config', '--set', key, str(value)] |
774
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
775
|
|
|
|
776
|
|
|
return self._call_and_parse( |
777
|
|
|
cmd_list, |
778
|
|
|
abspath=kwargs.get('abspath', True), |
779
|
|
|
callback=lambda o, e: o.get('warnings', [])) |
780
|
|
|
|
781
|
|
|
def config_add(self, key, value, **kwargs): |
782
|
|
|
""" |
783
|
|
|
Add a value to a key. |
784
|
|
|
|
785
|
|
|
Returns a list of warnings Conda may have emitted. |
786
|
|
|
""" |
787
|
|
|
cmd_list = ['config', '--add', key, value] |
788
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
789
|
|
|
|
790
|
|
|
return self._call_and_parse( |
791
|
|
|
cmd_list, |
792
|
|
|
abspath=kwargs.get('abspath', True), |
793
|
|
|
callback=lambda o, e: o.get('warnings', [])) |
794
|
|
|
|
795
|
|
|
def config_remove(self, key, value, **kwargs): |
796
|
|
|
""" |
797
|
|
|
Remove a value from a key. |
798
|
|
|
|
799
|
|
|
Returns a list of warnings Conda may have emitted. |
800
|
|
|
""" |
801
|
|
|
cmd_list = ['config', '--remove', key, value] |
802
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
803
|
|
|
|
804
|
|
|
return self._call_and_parse( |
805
|
|
|
cmd_list, |
806
|
|
|
abspath=kwargs.get('abspath', True), |
807
|
|
|
callback=lambda o, e: o.get('warnings', [])) |
808
|
|
|
|
809
|
|
|
def config_delete(self, key, **kwargs): |
810
|
|
|
""" |
811
|
|
|
Remove a key entirely. |
812
|
|
|
|
813
|
|
|
Returns a list of warnings Conda may have emitted. |
814
|
|
|
""" |
815
|
|
|
cmd_list = ['config', '--remove-key', key] |
816
|
|
|
cmd_list.extend(self._setup_config_from_kwargs(kwargs)) |
817
|
|
|
|
818
|
|
|
return self._call_and_parse( |
819
|
|
|
cmd_list, |
820
|
|
|
abspath=kwargs.get('abspath', True), |
821
|
|
|
callback=lambda o, e: o.get('warnings', [])) |
822
|
|
|
|
823
|
|
|
def run(self, command, abspath=True): |
824
|
|
|
""" |
825
|
|
|
Launch the specified app by name or full package name. |
826
|
|
|
|
827
|
|
|
Returns a dictionary containing the key "fn", whose value is the full |
828
|
|
|
package (ending in ``.tar.bz2``) of the app. |
829
|
|
|
""" |
830
|
|
|
cmd_list = ['run', '--json', command] |
831
|
|
|
|
832
|
|
|
return self._call_and_parse(cmd_list, abspath=abspath) |
833
|
|
|
|
834
|
|
|
# --- Additional methods |
835
|
|
|
# ----------------------------------------------------------------------------- |
836
|
|
|
def dependencies(self, name=None, prefix=None, pkgs=None, channels=None, |
837
|
|
|
dep=True): |
838
|
|
|
""" |
839
|
|
|
Get dependenciy list for packages to be installed into an environment |
840
|
|
|
defined either by 'name' or 'prefix'. |
841
|
|
|
""" |
842
|
|
|
if not pkgs or not isinstance(pkgs, (list, tuple)): |
843
|
|
|
raise TypeError('must specify a list of one or more packages to ' |
844
|
|
|
'install into existing environment') |
845
|
|
|
|
846
|
|
|
cmd_list = ['install', '--dry-run', '--json', '--force-pscheck'] |
847
|
|
|
|
848
|
|
|
if not dep: |
849
|
|
|
cmd_list.extend(['--no-deps']) |
850
|
|
|
|
851
|
|
|
if name: |
852
|
|
|
cmd_list.extend(['--name', name]) |
853
|
|
|
elif prefix: |
854
|
|
|
cmd_list.extend(['--prefix', prefix]) |
855
|
|
|
else: |
856
|
|
|
pass |
857
|
|
|
|
858
|
|
|
cmd_list.extend(pkgs) |
859
|
|
|
|
860
|
|
|
# TODO: Check if correct |
861
|
|
|
if channels: |
862
|
|
|
cmd_list.extend(['--override-channels']) |
863
|
|
|
|
864
|
|
|
for channel in channels: |
865
|
|
|
cmd_list.extend(['--channel']) |
866
|
|
|
cmd_list.extend([channel]) |
867
|
|
|
|
868
|
|
|
return self._call_and_parse(cmd_list) |
869
|
|
|
|
870
|
|
|
def environment_exists(self, name=None, prefix=None, abspath=True): |
871
|
|
|
""" |
872
|
|
|
Check if an environment exists by 'name' or by 'prefix'. If query is |
873
|
|
|
by 'name' only the default conda environments directory is searched. |
874
|
|
|
""" |
875
|
|
|
logger.debug(str((name, prefix))) |
876
|
|
|
|
877
|
|
|
if name and prefix: |
878
|
|
|
raise TypeError("Exactly one of 'name' or 'prefix' is required.") |
879
|
|
|
|
880
|
|
|
if name: |
881
|
|
|
prefix = self.get_prefix_envname(name) |
882
|
|
|
|
883
|
|
|
if prefix is None: |
884
|
|
|
prefix = self.ROOT_PREFIX |
885
|
|
|
|
886
|
|
|
return os.path.isdir(os.path.join(prefix, 'conda-meta')) |
887
|
|
|
|
888
|
|
|
def clear_lock(self, abspath=True): |
889
|
|
|
""" |
890
|
|
|
Clean any conda lock in the system. |
891
|
|
|
""" |
892
|
|
|
cmd_list = ['clean', '--lock', '--json'] |
893
|
|
|
return self._call_and_parse(cmd_list, abspath=abspath) |
894
|
|
|
|
895
|
|
|
def package_version(self, prefix=None, name=None, pkg=None): |
896
|
|
|
""" |
897
|
|
|
""" |
898
|
|
|
package_versions = {} |
899
|
|
|
|
900
|
|
|
if name and prefix: |
901
|
|
|
raise TypeError("Exactly one of 'name' or 'prefix' is required.") |
902
|
|
|
|
903
|
|
|
if name: |
904
|
|
|
prefix = self.get_prefix_envname(name) |
905
|
|
|
|
906
|
|
|
if self.environment_exists(prefix=prefix): |
907
|
|
|
|
908
|
|
|
for package in self.linked(prefix): |
909
|
|
|
if pkg in package: |
910
|
|
|
n, v, b = self.split_canonical_name(package) |
911
|
|
|
package_versions[n] = v |
912
|
|
|
|
913
|
|
|
return package_versions.get(pkg, None) |
914
|
|
|
|
915
|
|
|
def get_platform(self): |
916
|
|
|
""" |
917
|
|
|
Get platform of current system (system and bitness). |
918
|
|
|
""" |
919
|
|
|
_sys_map = {'linux2': 'linux', 'linux': 'linux', |
920
|
|
|
'darwin': 'osx', 'win32': 'win', 'openbsd5': 'openbsd'} |
921
|
|
|
|
922
|
|
|
non_x86_linux_machines = {'armv6l', 'armv7l', 'ppc64le'} |
923
|
|
|
sys_platform = _sys_map.get(sys.platform, 'unknown') |
924
|
|
|
bits = 8 * tuple.__itemsize__ |
925
|
|
|
|
926
|
|
|
if (sys_platform == 'linux' and |
927
|
|
|
platform.machine() in non_x86_linux_machines): |
928
|
|
|
arch_name = platform.machine() |
929
|
|
|
subdir = 'linux-{0}'.format(arch_name) |
930
|
|
|
else: |
931
|
|
|
arch_name = {64: 'x86_64', 32: 'x86'}[bits] |
932
|
|
|
subdir = '{0}-{1}'.format(sys_platform, bits) |
933
|
|
|
|
934
|
|
|
return subdir |
935
|
|
|
|
936
|
|
|
def get_condarc_channels(self): |
937
|
|
|
""" |
938
|
|
|
Returns all the channel urls defined in .condarc using the defined |
939
|
|
|
`channel_alias`. |
940
|
|
|
|
941
|
|
|
If no condarc file is found, use the default channels. |
942
|
|
|
""" |
943
|
|
|
# First get the location of condarc file and parse it to get |
944
|
|
|
# the channel alias and the channels. |
945
|
|
|
default_channel_alias = 'https://conda.anaconda.org' |
946
|
|
|
default_urls = ['https://repo.continuum.io/pkgs/free', |
947
|
|
|
'https://repo.continuum.io/pkgs/pro'] |
948
|
|
|
|
949
|
|
|
condarc_path = os.path.abspath(os.path.expanduser('~/.condarc')) |
950
|
|
|
channels = default_urls[:] |
951
|
|
|
|
952
|
|
|
if not os.path.isfile(condarc_path): |
953
|
|
|
condarc = None |
954
|
|
|
channel_alias = default_channel_alias |
955
|
|
|
else: |
956
|
|
|
with open(condarc_path, 'r') as f: |
957
|
|
|
data = f.read() |
958
|
|
|
condarc = yaml.load(data) |
959
|
|
|
channels += condarc.get('channels', []) |
960
|
|
|
channel_alias = condarc.get('channel_alias', |
961
|
|
|
default_channel_alias) |
962
|
|
|
|
963
|
|
|
if channel_alias[-1] == '/': |
964
|
|
|
template = "{0}{1}" |
965
|
|
|
else: |
966
|
|
|
template = "{0}/{1}" |
967
|
|
|
|
968
|
|
|
if 'defaults' in channels: |
969
|
|
|
channels.remove('defaults') |
970
|
|
|
|
971
|
|
|
channel_urls = [] |
972
|
|
|
for channel in channels: |
973
|
|
|
if not channel.startswith('http'): |
974
|
|
|
channel_url = template.format(channel_alias, channel) |
975
|
|
|
else: |
976
|
|
|
channel_url = channel |
977
|
|
|
channel_urls.append(channel_url) |
978
|
|
|
|
979
|
|
|
return channel_urls |
980
|
|
|
|
981
|
|
|
# --- Pip commands |
982
|
|
|
# ------------------------------------------------------------------------- |
983
|
|
|
def _call_pip(self, name=None, prefix=None, extra_args=None, |
984
|
|
|
callback=None): |
985
|
|
|
""" """ |
986
|
|
|
cmd_list = self._pip_cmd(name=name, prefix=prefix) |
987
|
|
|
cmd_list.extend(extra_args) |
988
|
|
|
|
989
|
|
|
process_worker = ProcessWorker(cmd_list, pip=True, callback=callback) |
990
|
|
|
process_worker.sig_finished.connect(self._start) |
991
|
|
|
self._queue.append(process_worker) |
992
|
|
|
self._start() |
993
|
|
|
|
994
|
|
|
return process_worker |
995
|
|
|
|
996
|
|
|
def _pip_cmd(self, name=None, prefix=None): |
997
|
|
|
""" |
998
|
|
|
Get pip location based on environment `name` or `prefix`. |
999
|
|
|
""" |
1000
|
|
|
if (name and prefix) or not (name or prefix): |
1001
|
|
|
raise TypeError("conda pip: exactly one of 'name' ""or 'prefix' " |
1002
|
|
|
"required.") |
1003
|
|
|
|
1004
|
|
|
if name and self.environment_exists(name=name): |
1005
|
|
|
prefix = self.get_prefix_envname(name) |
1006
|
|
|
|
1007
|
|
|
if sys.platform == 'win32': |
1008
|
|
|
python = join(prefix, 'python.exe') # FIXME: |
1009
|
|
|
pip = join(prefix, 'pip.exe') # FIXME: |
1010
|
|
|
else: |
1011
|
|
|
python = join(prefix, 'bin/python') |
1012
|
|
|
pip = join(prefix, 'bin/pip') |
1013
|
|
|
|
1014
|
|
|
cmd_list = [python, pip] |
1015
|
|
|
|
1016
|
|
|
return cmd_list |
1017
|
|
|
|
1018
|
|
|
def pip_list(self, name=None, prefix=None, abspath=True): |
1019
|
|
|
""" |
1020
|
|
|
Get list of pip installed packages. |
1021
|
|
|
""" |
1022
|
|
|
if (name and prefix) or not (name or prefix): |
1023
|
|
|
raise TypeError("conda pip: exactly one of 'name' ""or 'prefix' " |
1024
|
|
|
"required.") |
1025
|
|
|
|
1026
|
|
|
if name: |
1027
|
|
|
prefix = self.get_prefix_envname(name) |
1028
|
|
|
|
1029
|
|
|
pip_command = os.sep.join([prefix, 'bin', 'python']) |
1030
|
|
|
cmd_list = [pip_command, PIP_LIST_SCRIPT] |
1031
|
|
|
process_worker = ProcessWorker(cmd_list, pip=True, parse=True, |
1032
|
|
|
callback=self._pip_list, |
1033
|
|
|
extra_kwargs={'prefix': prefix}) |
1034
|
|
|
process_worker.sig_finished.connect(self._start) |
1035
|
|
|
self._queue.append(process_worker) |
1036
|
|
|
self._start() |
1037
|
|
|
|
1038
|
|
|
return process_worker |
1039
|
|
|
|
1040
|
|
|
# if name: |
1041
|
|
|
# cmd_list = ['list', '--name', name] |
1042
|
|
|
# if prefix: |
1043
|
|
|
# cmd_list = ['list', '--prefix', prefix] |
1044
|
|
|
|
1045
|
|
|
# return self._call_conda(cmd_list, abspath=abspath, |
1046
|
|
|
# callback=self._pip_list) |
1047
|
|
|
|
1048
|
|
|
def _pip_list(self, stdout, stderr, prefix=None): |
1049
|
|
|
""" |
1050
|
|
|
""" |
1051
|
|
|
result = stdout # A dict |
1052
|
|
|
linked = self.linked(prefix) |
1053
|
|
|
|
1054
|
|
|
pip_only = [] |
1055
|
|
|
|
1056
|
|
|
linked_names = [self.split_canonical_name(l)[0] for l in linked] |
1057
|
|
|
|
1058
|
|
|
for pkg in result: |
1059
|
|
|
name = self.split_canonical_name(pkg)[0] |
1060
|
|
|
if name not in linked_names: |
1061
|
|
|
pip_only.append(pkg) |
1062
|
|
|
# FIXME: NEED A MORE ROBUST WAY! |
1063
|
|
|
# if '<pip>' in line and '#' not in line: |
1064
|
|
|
# temp = line.split()[:-1] + ['pip'] |
1065
|
|
|
# temp = '-'.join(temp) |
1066
|
|
|
# if '-(' in temp: |
1067
|
|
|
# start = temp.find('-(') |
1068
|
|
|
# end = temp.find(')') |
1069
|
|
|
# substring = temp[start:end+1] |
1070
|
|
|
# temp = temp.replace(substring, '') |
1071
|
|
|
# result.append(temp) |
1072
|
|
|
|
1073
|
|
|
return pip_only |
1074
|
|
|
|
1075
|
|
|
def pip_remove(self, name=None, prefix=None, pkgs=None): |
1076
|
|
|
""" |
1077
|
|
|
Remove a pip package in given environment by `name` or `prefix`. |
1078
|
|
|
""" |
1079
|
|
|
logger.debug(str((prefix, pkgs))) |
1080
|
|
|
|
1081
|
|
|
if isinstance(pkgs, list) or isinstance(pkgs, tuple): |
1082
|
|
|
pkg = ' '.join(pkgs) |
1083
|
|
|
else: |
1084
|
|
|
pkg = pkgs |
1085
|
|
|
|
1086
|
|
|
extra_args = ['uninstall', '--yes', pkg] |
1087
|
|
|
|
1088
|
|
|
return self._call_pip(name=name, prefix=prefix, extra_args=extra_args) |
1089
|
|
|
|
1090
|
|
|
def pip_search(self, search_string=None): |
1091
|
|
|
""" |
1092
|
|
|
Search for pip installable python packages in PyPI matching |
1093
|
|
|
`search_string`. |
1094
|
|
|
""" |
1095
|
|
|
extra_args = ['search', search_string] |
1096
|
|
|
return self._call_pip(name='root', extra_args=extra_args, |
1097
|
|
|
callback=self._pip_search) |
1098
|
|
|
|
1099
|
|
|
# if stderr: |
1100
|
|
|
# raise PipError(stderr) |
1101
|
|
|
# You are using pip version 7.1.2, however version 8.0.2 is available. |
1102
|
|
|
# You should consider upgrading via the 'pip install --upgrade pip' |
1103
|
|
|
# command. |
1104
|
|
|
|
1105
|
|
|
def _pip_search(self, stdout, stderr): |
1106
|
|
|
result = {} |
1107
|
|
|
lines = to_text_string(stdout).split('\n') |
1108
|
|
|
while '' in lines: |
1109
|
|
|
lines.remove('') |
1110
|
|
|
|
1111
|
|
|
for line in lines: |
1112
|
|
|
if ' - ' in line: |
1113
|
|
|
parts = line.split(' - ') |
1114
|
|
|
name = parts[0].strip() |
1115
|
|
|
description = parts[1].strip() |
1116
|
|
|
result[name] = description |
1117
|
|
|
|
1118
|
|
|
return result |
1119
|
|
|
|
1120
|
|
|
|
1121
|
|
|
CONDA_API = None |
1122
|
|
|
|
1123
|
|
|
|
1124
|
|
|
def CondaAPI(): |
1125
|
|
|
global CONDA_API |
1126
|
|
|
|
1127
|
|
|
if CONDA_API is None: |
1128
|
|
|
CONDA_API = _CondaAPI() |
1129
|
|
|
|
1130
|
|
|
return CONDA_API |
1131
|
|
|
|
1132
|
|
|
COUNTER = 0 |
1133
|
|
|
|
1134
|
|
|
|
1135
|
|
|
def ready_print(worker, output, error): |
1136
|
|
|
global COUNTER |
1137
|
|
|
COUNTER += 1 |
1138
|
|
|
print(COUNTER, output, error) |
1139
|
|
|
|
1140
|
|
|
|
1141
|
|
|
def test(): |
1142
|
|
|
""" |
1143
|
|
|
""" |
1144
|
|
|
from conda_manager.utils.qthelpers import qapplication |
1145
|
|
|
|
1146
|
|
|
app = qapplication() |
1147
|
|
|
conda_api = CondaAPI() |
1148
|
|
|
# print(conda_api.get_condarc_channels()) |
1149
|
|
|
# worker = conda_api.info() |
1150
|
|
|
## worker.sig_finished.connect(ready_print) |
1151
|
|
|
# worker = conda_api.info() |
1152
|
|
|
# worker = conda_api.info() |
1153
|
|
|
# worker = conda_api.info() |
1154
|
|
|
# worker = conda_api.info() |
1155
|
|
|
# worker = conda_api.info() |
1156
|
|
|
# worker = conda_api.info() |
1157
|
|
|
# worker = conda_api.info() |
1158
|
|
|
# worker = conda_api.info() |
1159
|
|
|
# worker = conda_api.info() |
1160
|
|
|
# worker = conda_api.info() |
1161
|
|
|
# worker = conda_api.pip_search('spyder') |
1162
|
|
|
# worker.sig_finished.connect(ready_print) |
1163
|
|
|
worker = conda_api.pip_list(name='py3') |
1164
|
|
|
worker.sig_finished.connect(ready_print) |
1165
|
|
|
# print(conda_api.package_version(name='root', pkg='spyder')) |
1166
|
|
|
|
1167
|
|
|
app.exec_() |
1168
|
|
|
|
1169
|
|
|
|
1170
|
|
|
if __name__ == '__main__': |
1171
|
|
|
test() |
1172
|
|
|
|