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# -*- coding: utf-8 -*- |
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# |
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# This file is part of SENAITE.CORE |
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# |
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# Copyright 2018 by it's authors. |
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# Some rights reserved. See LICENSE.rst, CONTRIBUTORS.rst. |
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import sys |
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from decimal import Decimal |
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from operator import methodcaller |
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from AccessControl import ClassSecurityInfo |
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from bika.lims import api |
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from bika.lims import bikaMessageFactory as _ |
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from bika.lims import deprecated |
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from bika.lims import logger |
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# Bika Fields |
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from bika.lims.browser.fields import ARAnalysesField |
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from bika.lims.browser.fields import DateTimeField |
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from bika.lims.browser.fields import ProxyField |
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from bika.lims.browser.fields import UIDReferenceField |
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# Bika Widgets |
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from bika.lims.browser.fields.remarksfield import RemarksField |
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from bika.lims.browser.widgets import DateTimeWidget |
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from bika.lims.browser.widgets import RemarksWidget |
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from bika.lims.browser.widgets import DecimalWidget |
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from bika.lims.browser.widgets import PrioritySelectionWidget |
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from bika.lims.browser.widgets import ReferenceWidget |
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from bika.lims.browser.widgets import RejectionWidget |
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from bika.lims.browser.widgets import SelectionWidget as BikaSelectionWidget |
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from bika.lims.catalog import CATALOG_ANALYSIS_LISTING |
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from bika.lims.config import PRIORITIES |
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from bika.lims.config import PROJECTNAME |
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from bika.lims.content.analysisspec import ResultsRangeDict |
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from bika.lims.content.bikaschema import BikaSchema |
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# Bika Interfaces |
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from bika.lims.interfaces import IAnalysisRequest |
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# Bika Permissions |
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from bika.lims.permissions import EditARContact |
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from bika.lims.permissions import ManageInvoices |
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from bika.lims.permissions import SampleSample |
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from bika.lims.permissions import ScheduleSampling |
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from bika.lims.permissions import Verify as VerifyPermission |
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# Bika Utils |
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from bika.lims.utils import getUsers |
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from bika.lims.utils import user_email |
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from bika.lims.utils import user_fullname |
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# Bika Workflow |
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from bika.lims.workflow import getReviewHistoryActionsList |
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from bika.lims.workflow import getTransitionDate |
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from bika.lims.workflow import getTransitionUsers |
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from bika.lims.workflow.analysisrequest import events |
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from bika.lims.workflow.analysisrequest import guards |
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from DateTime import DateTime |
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from plone import api as ploneapi |
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from Products.Archetypes.atapi import BaseFolder |
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from Products.Archetypes.atapi import BooleanField |
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from Products.Archetypes.atapi import BooleanWidget |
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from Products.Archetypes.atapi import ComputedField |
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from Products.Archetypes.atapi import ComputedWidget |
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from Products.Archetypes.atapi import DisplayList |
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from Products.Archetypes.atapi import FileField |
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from Products.Archetypes.atapi import FileWidget |
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from Products.Archetypes.atapi import FixedPointField |
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from Products.Archetypes.atapi import ReferenceField |
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from Products.Archetypes.atapi import StringField |
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from Products.Archetypes.atapi import StringWidget |
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from Products.Archetypes.atapi import TextAreaWidget |
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from Products.Archetypes.atapi import TextField |
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from Products.Archetypes.atapi import registerType |
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from Products.Archetypes.config import REFERENCE_CATALOG |
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from Products.Archetypes.public import Schema |
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from Products.Archetypes.references import HoldingReference |
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from Products.Archetypes.Widget import RichWidget |
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# AT Fields and AT Widgets |
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from Products.ATExtensions.field import RecordsField |
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from Products.CMFCore.permissions import ModifyPortalContent |
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from Products.CMFCore.permissions import View |
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from Products.CMFCore.utils import getToolByName |
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from Products.CMFPlone.utils import _createObjectByType |
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from Products.CMFPlone.utils import safe_unicode |
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from zope.interface import implements |
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# SCHEMA DEFINITION |
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schema = BikaSchema.copy() + Schema(( |
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UIDReferenceField( |
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'Contact', |
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required=1, |
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default_method='getContactUIDForUser', |
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allowed_types=('Contact',), |
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mode="rw", |
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read_permission=View, |
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write_permission=EditARContact, |
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widget=ReferenceWidget( |
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label=_("Contact"), |
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render_own_label=True, |
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size=20, |
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helper_js=("bika_widgets/referencewidget.js", |
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"++resource++bika.lims.js/contact.js"), |
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description=_("The primary contact of this analysis request, " |
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"who will receive notifications and publications " |
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"via email"), |
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visible={ |
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'edit': 'visible', |
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'view': 'visible', |
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'add': 'edit', |
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'header_table': 'prominent', |
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'sample_registered': { |
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'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
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'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
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'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
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'sampled': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
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'sample_due': {'view': 'visible', 'edit': 'visible'}, |
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'sample_received': {'view': 'visible', 'edit': 'visible'}, |
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'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
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'verified': {'view': 'visible', 'edit': 'invisible'}, |
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'published': {'view': 'visible', 'edit': 'invisible'}, |
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'invalid': {'view': 'visible', 'edit': 'invisible'}, |
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'rejected': {'view': 'visible', 'edit': 'invisible'}, |
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}, |
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base_query={'inactive_state': 'active'}, |
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showOn=True, |
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popup_width='400px', |
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colModel=[ |
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{'columnName': 'UID', 'hidden': True}, |
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{'columnName': 'Fullname', 'width': '50', |
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'label': _('Name')}, |
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{'columnName': 'EmailAddress', 'width': '50', |
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'label': _('Email Address')}, |
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], |
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), |
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), |
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ReferenceField( |
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'CCContact', |
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multiValued=1, |
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vocabulary_display_path_bound=sys.maxsize, |
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allowed_types=('Contact',), |
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referenceClass=HoldingReference, |
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relationship='AnalysisRequestCCContact', |
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mode="rw", |
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read_permission=View, |
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write_permission=EditARContact, |
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widget=ReferenceWidget( |
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label=_("CC Contacts"), |
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description=_("The contacts used in CC for email notifications"), |
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render_own_label=True, |
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size=20, |
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visible={ |
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'edit': 'visible', |
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'view': 'visible', |
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'add': 'edit', |
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'header_table': 'prominent', |
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'sample_registered': { |
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'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
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'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
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'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
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'sampled': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
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'sample_due': {'view': 'visible', 'edit': 'visible'}, |
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'sample_received': {'view': 'visible', 'edit': 'visible'}, |
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'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
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'verified': {'view': 'visible', 'edit': 'invisible'}, |
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'published': {'view': 'visible', 'edit': 'invisible'}, |
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'invalid': {'view': 'visible', 'edit': 'invisible'}, |
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'rejected': {'view': 'visible', 'edit': 'invisible'}, |
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}, |
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base_query={'inactive_state': 'active'}, |
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showOn=True, |
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popup_width='400px', |
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colModel=[ |
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{'columnName': 'UID', 'hidden': True}, |
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{'columnName': 'Fullname', 'width': '50', |
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'label': _('Name')}, |
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{'columnName': 'EmailAddress', 'width': '50', |
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'label': _('Email Address')}, |
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], |
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), |
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), |
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StringField( |
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'CCEmails', |
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mode="rw", |
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read_permission=View, |
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write_permission=EditARContact, |
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acquire=True, |
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acquire_fieldname="CCEmails", |
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widget=StringWidget( |
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label=_("CC Emails"), |
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description=_("Additional email addresses to be notified"), |
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visible={ |
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'edit': 'visible', |
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'view': 'visible', |
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'add': 'edit', |
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'header_table': 'prominent', |
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'sample_registered': { |
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'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
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'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
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'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
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'sampled': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
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'sample_received': {'view': 'visible', 'edit': 'visible'}, |
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'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
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'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
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'verified': {'view': 'visible', 'edit': 'invisible'}, |
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'published': {'view': 'visible', 'edit': 'invisible'}, |
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'invalid': {'view': 'visible', 'edit': 'invisible'}, |
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'rejected': {'view': 'visible', 'edit': 'invisible'}, |
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}, |
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render_own_label=True, |
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size=20, |
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), |
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), |
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ReferenceField( |
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'Client', |
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required=1, |
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allowed_types=('Client',), |
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relationship='AnalysisRequestClient', |
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mode="rw", |
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read_permission=View, |
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write_permission=ModifyPortalContent, |
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widget=ReferenceWidget( |
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label=_("Client"), |
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description=_("The assigned client of this request"), |
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size=20, |
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render_own_label=True, |
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visible={ |
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'edit': 'visible', |
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'view': 'visible', |
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'add': 'edit', |
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'header_table': 'visible', |
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'sample_registered': { |
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'view': 'invisible', 'edit': 'visible', 'add': 'edit'}, |
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'to_be_sampled': {'view': 'invisible', 'edit': 'invisible'}, |
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'scheduled_sampling': { |
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'view': 'invisible', 'edit': 'invisible'}, |
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'sampled': {'view': 'invisible', 'edit': 'invisible'}, |
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'to_be_preserved': {'view': 'invisible', 'edit': 'invisible'}, |
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'sample_received': {'view': 'invisible', 'edit': 'invisible'}, |
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'attachment_due': {'view': 'invisible', 'edit': 'invisible'}, |
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'to_be_verified': {'view': 'invisible', 'edit': 'invisible'}, |
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'verified': {'view': 'invisible', 'edit': 'invisible'}, |
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'published': {'view': 'invisible', 'edit': 'invisible'}, |
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'invalid': {'view': 'invisible', 'edit': 'invisible'}, |
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'rejected': {'view': 'invisible', 'edit': 'invisible'}, |
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}, |
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base_query={'review_state': 'active'}, |
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showOn=True, |
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add_button={ |
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'visible': True, |
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'url': 'clients/createObject?type_name=Client', |
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'return_fields': ['Title'], |
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'js_controllers': ['#client-base-edit'], |
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'overlay_handler': 'ClientOverlayHandler', |
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} |
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), |
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), |
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UIDReferenceField( |
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'Sample', |
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allowed_types=('Sample',), |
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mode="rw", |
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read_permission=View, |
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write_permission=ModifyPortalContent, |
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widget=ReferenceWidget( |
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label=_("Sample"), |
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description=_("Select a sample to create a secondary AR"), |
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size=20, |
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render_own_label=True, |
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visible={ |
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'edit': 'visible', |
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'view': 'visible', |
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'add': 'edit', |
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'header_table': 'visible', |
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'sample_registered': { |
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'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
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'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
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'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
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'sampled': {'view': 'visible', 'edit': 'invisible'}, |
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'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
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'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
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'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
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'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
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'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
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'verified': {'view': 'visible', 'edit': 'invisible'}, |
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'published': {'view': 'visible', 'edit': 'invisible'}, |
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'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
294
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
295
|
|
|
}, |
|
296
|
|
|
catalog_name='bika_catalog', |
|
297
|
|
|
base_query={'cancellation_state': 'active', |
|
298
|
|
|
'review_state': ['sample_due', 'sample_received', ]}, |
|
299
|
|
|
showOn=True, |
|
300
|
|
|
), |
|
301
|
|
|
), |
|
302
|
|
|
|
|
303
|
|
|
ReferenceField( |
|
304
|
|
|
'Batch', |
|
305
|
|
|
allowed_types=('Batch',), |
|
306
|
|
|
relationship='AnalysisRequestBatch', |
|
307
|
|
|
mode="rw", |
|
308
|
|
|
read_permission=View, |
|
309
|
|
|
write_permission=ModifyPortalContent, |
|
310
|
|
|
widget=ReferenceWidget( |
|
311
|
|
|
label=_("Batch"), |
|
312
|
|
|
size=20, |
|
313
|
|
|
description=_("The assigned batch of this request"), |
|
314
|
|
|
render_own_label=True, |
|
315
|
|
|
visible={ |
|
316
|
|
|
'edit': 'visible', |
|
317
|
|
|
'view': 'visible', |
|
318
|
|
|
'add': 'edit', |
|
319
|
|
|
'header_table': 'visible', |
|
320
|
|
|
'sample_registered': { |
|
321
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
322
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
323
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
324
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
325
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
326
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
327
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
328
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
329
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
330
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
331
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
332
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
333
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
334
|
|
|
}, |
|
335
|
|
|
catalog_name='bika_catalog', |
|
336
|
|
|
base_query={'review_state': 'open', |
|
337
|
|
|
'cancellation_state': 'active'}, |
|
338
|
|
|
showOn=True, |
|
339
|
|
|
), |
|
340
|
|
|
), |
|
341
|
|
|
|
|
342
|
|
|
ReferenceField( |
|
343
|
|
|
'SamplingRound', |
|
344
|
|
|
allowed_types=('SamplingRound',), |
|
345
|
|
|
relationship='AnalysisRequestSamplingRound', |
|
346
|
|
|
mode="rw", |
|
347
|
|
|
read_permission=View, |
|
348
|
|
|
write_permission=ModifyPortalContent, |
|
349
|
|
|
widget=ReferenceWidget( |
|
350
|
|
|
label=_("Sampling Round"), |
|
351
|
|
|
description=_("The assigned sampling round of this request"), |
|
352
|
|
|
size=20, |
|
353
|
|
|
render_own_label=True, |
|
354
|
|
|
visible={ |
|
355
|
|
|
'edit': 'visible', |
|
356
|
|
|
'view': 'visible', |
|
357
|
|
|
'add': 'edit', |
|
358
|
|
|
'header_table': 'visible', |
|
359
|
|
|
'sample_registered': { |
|
360
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
361
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
362
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
363
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
364
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
365
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
366
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
367
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
368
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
369
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
370
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
371
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
372
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
373
|
|
|
}, |
|
374
|
|
|
catalog_name='portal_catalog', |
|
375
|
|
|
base_query={}, |
|
376
|
|
|
showOn=True, |
|
377
|
|
|
), |
|
378
|
|
|
), |
|
379
|
|
|
|
|
380
|
|
|
ReferenceField( |
|
381
|
|
|
'SubGroup', |
|
382
|
|
|
required=False, |
|
383
|
|
|
allowed_types=('SubGroup',), |
|
384
|
|
|
referenceClass=HoldingReference, |
|
385
|
|
|
relationship='AnalysisRequestSubGroup', |
|
386
|
|
|
widget=ReferenceWidget( |
|
387
|
|
|
label=_("Batch Sub-group"), |
|
388
|
|
|
description=_("The assigned batch sub group of this request"), |
|
389
|
|
|
size=20, |
|
390
|
|
|
render_own_label=True, |
|
391
|
|
|
visible={ |
|
392
|
|
|
'edit': 'visible', |
|
393
|
|
|
'view': 'visible', |
|
394
|
|
|
'add': 'edit', |
|
395
|
|
|
'header_table': 'visible', |
|
396
|
|
|
'sample_registered': { |
|
397
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
398
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
399
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
400
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
401
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
402
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
403
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
404
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
405
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
406
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
407
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
408
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
409
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
410
|
|
|
}, |
|
411
|
|
|
catalog_name='bika_setup_catalog', |
|
412
|
|
|
colModel=[ |
|
413
|
|
|
{'columnName': 'Title', 'width': '30', |
|
414
|
|
|
'label': _('Title'), 'align': 'left'}, |
|
415
|
|
|
{'columnName': 'Description', 'width': '70', |
|
416
|
|
|
'label': _('Description'), 'align': 'left'}, |
|
417
|
|
|
{'columnName': 'SortKey', 'hidden': True}, |
|
418
|
|
|
{'columnName': 'UID', 'hidden': True}, |
|
419
|
|
|
], |
|
420
|
|
|
base_query={'inactive_state': 'active'}, |
|
421
|
|
|
sidx='SortKey', |
|
422
|
|
|
sord='asc', |
|
423
|
|
|
showOn=True, |
|
424
|
|
|
), |
|
425
|
|
|
), |
|
426
|
|
|
|
|
427
|
|
|
ReferenceField( |
|
428
|
|
|
'Template', |
|
429
|
|
|
allowed_types=('ARTemplate',), |
|
430
|
|
|
referenceClass=HoldingReference, |
|
431
|
|
|
relationship='AnalysisRequestARTemplate', |
|
432
|
|
|
mode="rw", |
|
433
|
|
|
read_permission=View, |
|
434
|
|
|
write_permission=ModifyPortalContent, |
|
435
|
|
|
widget=ReferenceWidget( |
|
436
|
|
|
label=_("AR Template"), |
|
437
|
|
|
description=_("The predefined values of the AR template are set " |
|
438
|
|
|
"in the request"), |
|
439
|
|
|
size=20, |
|
440
|
|
|
render_own_label=True, |
|
441
|
|
|
visible={ |
|
442
|
|
|
'edit': 'visible', |
|
443
|
|
|
'view': 'visible', |
|
444
|
|
|
'add': 'edit', |
|
445
|
|
|
'secondary': 'disabled', |
|
446
|
|
|
'header_table': 'visible', |
|
447
|
|
|
'sample_registered': { |
|
448
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
449
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
450
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
|
451
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
452
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
453
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
454
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
455
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
456
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
457
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
458
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
459
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
460
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
461
|
|
|
}, |
|
462
|
|
|
catalog_name='bika_setup_catalog', |
|
463
|
|
|
base_query={'inactive_state': 'active'}, |
|
464
|
|
|
showOn=True, |
|
465
|
|
|
), |
|
466
|
|
|
), |
|
467
|
|
|
|
|
468
|
|
|
# TODO: Profile'll be delated |
|
469
|
|
|
ReferenceField( |
|
470
|
|
|
'Profile', |
|
471
|
|
|
allowed_types=('AnalysisProfile',), |
|
472
|
|
|
referenceClass=HoldingReference, |
|
473
|
|
|
relationship='AnalysisRequestAnalysisProfile', |
|
474
|
|
|
mode="rw", |
|
475
|
|
|
read_permission=View, |
|
476
|
|
|
write_permission=ModifyPortalContent, |
|
477
|
|
|
widget=ReferenceWidget( |
|
478
|
|
|
label=_("Analysis Profile"), |
|
479
|
|
|
description=_("Analysis profiles apply a certain set of analyses"), |
|
480
|
|
|
size=20, |
|
481
|
|
|
render_own_label=True, |
|
482
|
|
|
visible=False, |
|
483
|
|
|
catalog_name='bika_setup_catalog', |
|
484
|
|
|
base_query={'inactive_state': 'active'}, |
|
485
|
|
|
showOn=False, |
|
486
|
|
|
), |
|
487
|
|
|
), |
|
488
|
|
|
|
|
489
|
|
|
ReferenceField( |
|
490
|
|
|
'Profiles', |
|
491
|
|
|
multiValued=1, |
|
492
|
|
|
allowed_types=('AnalysisProfile',), |
|
493
|
|
|
referenceClass=HoldingReference, |
|
494
|
|
|
vocabulary_display_path_bound=sys.maxsize, |
|
495
|
|
|
relationship='AnalysisRequestAnalysisProfiles', |
|
496
|
|
|
mode="rw", |
|
497
|
|
|
read_permission=View, |
|
498
|
|
|
write_permission=ModifyPortalContent, |
|
499
|
|
|
widget=ReferenceWidget( |
|
500
|
|
|
label=_("Analysis Profiles"), |
|
501
|
|
|
description=_("Analysis profiles apply a certain set of analyses"), |
|
502
|
|
|
size=20, |
|
503
|
|
|
render_own_label=True, |
|
504
|
|
|
visible={ |
|
505
|
|
|
'edit': 'visible', |
|
506
|
|
|
'view': 'visible', |
|
507
|
|
|
'add': 'edit', |
|
508
|
|
|
'header_table': 'visible', |
|
509
|
|
|
'sample_registered': { |
|
510
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
511
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
512
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
|
513
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
514
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
515
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
516
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
517
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
518
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
519
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
520
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
521
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
522
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
523
|
|
|
}, |
|
524
|
|
|
catalog_name='bika_setup_catalog', |
|
525
|
|
|
base_query={'inactive_state': 'active'}, |
|
526
|
|
|
showOn=True, |
|
527
|
|
|
), |
|
528
|
|
|
), |
|
529
|
|
|
# This field is a mirror of a field in Sample with the same name |
|
530
|
|
|
# TODO Workflow - Request - Fix DateSampled inconsistencies. At the moment, |
|
531
|
|
|
# one can create an AR (using code) with DateSampled set when sampling_wf at |
|
532
|
|
|
# the same time sampling workflow is active. This might cause |
|
533
|
|
|
# inconsistencies: AR still in `to_be_sampled`, but getDateSampled returns |
|
534
|
|
|
# a valid date! |
|
535
|
|
|
ProxyField( |
|
536
|
|
|
'DateSampled', |
|
537
|
|
|
proxy="context.getSample()", |
|
538
|
|
|
mode="rw", |
|
539
|
|
|
read_permission=View, |
|
540
|
|
|
write_permission=ModifyPortalContent, |
|
541
|
|
|
widget=DateTimeWidget( |
|
542
|
|
|
label=_("Date Sampled"), |
|
543
|
|
|
description=_("The date when the sample was taken"), |
|
544
|
|
|
size=20, |
|
545
|
|
|
show_time=True, |
|
546
|
|
|
datepicker_nofuture=1, |
|
547
|
|
|
visible={ |
|
548
|
|
|
'edit': 'visible', |
|
549
|
|
|
'view': 'visible', |
|
550
|
|
|
'add': 'edit', |
|
551
|
|
|
'secondary': 'disabled', |
|
552
|
|
|
'header_table': 'prominent', |
|
553
|
|
|
'sample_registered': { |
|
554
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
555
|
|
|
'to_be_sampled': {'view': 'invisible', 'edit': 'visible'}, |
|
556
|
|
|
'scheduled_sampling': {'view': 'invisible', 'edit': 'visible'}, |
|
557
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
558
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
559
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
560
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
561
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
562
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
563
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
564
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
565
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
566
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
567
|
|
|
}, |
|
568
|
|
|
render_own_label=True, |
|
569
|
|
|
), |
|
570
|
|
|
), |
|
571
|
|
|
# This field is a mirror of a field in Sample with the same name |
|
572
|
|
|
ProxyField( |
|
573
|
|
|
'Sampler', |
|
574
|
|
|
proxy="context.getSample()", |
|
575
|
|
|
mode="rw", |
|
576
|
|
|
read_permission=View, |
|
577
|
|
|
write_permission=SampleSample, |
|
578
|
|
|
vocabulary='getSamplers', |
|
579
|
|
|
widget=BikaSelectionWidget( |
|
580
|
|
|
format='select', |
|
581
|
|
|
label=_("Sampler"), |
|
582
|
|
|
description=_("The person who took the sample"), |
|
583
|
|
|
# see SamplingWOrkflowWidgetVisibility |
|
584
|
|
|
visible={ |
|
585
|
|
|
'edit': 'visible', |
|
586
|
|
|
'view': 'visible', |
|
587
|
|
|
'add': 'edit', |
|
588
|
|
|
'header_table': 'prominent', |
|
589
|
|
|
'sample_registered': { |
|
590
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
591
|
|
|
'to_be_sampled': {'view': 'invisible', 'edit': 'visible'}, |
|
592
|
|
|
'scheduled_sampling': {'view': 'invisible', 'edit': 'visible'}, |
|
593
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
594
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
595
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
596
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
597
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
598
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
599
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
600
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
601
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
602
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
603
|
|
|
}, |
|
604
|
|
|
render_own_label=True, |
|
605
|
|
|
), |
|
606
|
|
|
), |
|
607
|
|
|
|
|
608
|
|
|
# Sample field |
|
609
|
|
|
ProxyField( |
|
610
|
|
|
'ScheduledSamplingSampler', |
|
611
|
|
|
proxy="context.getSample()", |
|
612
|
|
|
mode="rw", |
|
613
|
|
|
read_permission=View, |
|
614
|
|
|
write_permission=ScheduleSampling, |
|
615
|
|
|
vocabulary='getSamplers', |
|
616
|
|
|
widget=BikaSelectionWidget( |
|
617
|
|
|
description=_("Define the sampler supposed to do the sample in " |
|
618
|
|
|
"the scheduled date"), |
|
619
|
|
|
format='select', |
|
620
|
|
|
label=_("Sampler for scheduled sampling"), |
|
621
|
|
|
visible={ |
|
622
|
|
|
'edit': 'visible', |
|
623
|
|
|
'view': 'visible', |
|
624
|
|
|
'header_table': 'visible', |
|
625
|
|
|
'sample_registered': { |
|
626
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
627
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
628
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
629
|
|
|
'sampled': {'view': 'invisible', 'edit': 'invisible'}, |
|
630
|
|
|
'to_be_preserved': {'view': 'invisible', 'edit': 'invisible'}, |
|
631
|
|
|
'sample_due': {'view': 'invisible', 'edit': 'invisible'}, |
|
632
|
|
|
'sample_received': {'view': 'invisible', 'edit': 'invisible'}, |
|
633
|
|
|
'expired': {'view': 'invisible', 'edit': 'invisible'}, |
|
634
|
|
|
'disposed': {'view': 'invisible', 'edit': 'invisible'}, |
|
635
|
|
|
}, |
|
636
|
|
|
render_own_label=True, |
|
637
|
|
|
), |
|
638
|
|
|
), # This field is a mirror of a Sample field with the same name |
|
639
|
|
|
|
|
640
|
|
|
# Sample field |
|
641
|
|
|
ProxyField( |
|
642
|
|
|
'SamplingDate', |
|
643
|
|
|
required=0, |
|
644
|
|
|
proxy="context.getSample()", |
|
645
|
|
|
mode="rw", |
|
646
|
|
|
read_permission=View, |
|
647
|
|
|
write_permission=ModifyPortalContent, |
|
648
|
|
|
widget=DateTimeWidget( |
|
649
|
|
|
label=_("Expected Sampling Date"), |
|
650
|
|
|
description=_("The date when the sample will be taken"), |
|
651
|
|
|
size=20, |
|
652
|
|
|
show_time=True, |
|
653
|
|
|
render_own_label=True, |
|
654
|
|
|
datepicker_nopast=1, |
|
655
|
|
|
# We must use SamplingWOrkflowWidgetVisibility soon. |
|
656
|
|
|
# For now we will handle it through JS |
|
657
|
|
|
# see SamplingWOrkflowWidgetVisibility |
|
658
|
|
|
visible={ |
|
659
|
|
|
'edit': 'visible', |
|
660
|
|
|
'view': 'visible', |
|
661
|
|
|
'add': 'edit', |
|
662
|
|
|
'header_table': 'visible', |
|
663
|
|
|
'secondary': 'disabled', |
|
664
|
|
|
'sample_registered': { |
|
665
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
666
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
667
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
668
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
669
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
670
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
671
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
672
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
673
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
674
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
675
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
676
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
677
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
678
|
|
|
}, |
|
679
|
|
|
), |
|
680
|
|
|
), |
|
681
|
|
|
|
|
682
|
|
|
# Sample field |
|
683
|
|
|
ProxyField( |
|
684
|
|
|
'SampleType', |
|
685
|
|
|
proxy="context.getSample()", |
|
686
|
|
|
required=1, |
|
687
|
|
|
allowed_types='SampleType', |
|
688
|
|
|
relationship='AnalysisRequestSampleType', |
|
689
|
|
|
mode="rw", |
|
690
|
|
|
read_permission=View, |
|
691
|
|
|
write_permission=ModifyPortalContent, |
|
692
|
|
|
widget=ReferenceWidget( |
|
693
|
|
|
label=_("Sample Type"), |
|
694
|
|
|
description=_("Create a new sample of this type"), |
|
695
|
|
|
size=20, |
|
696
|
|
|
render_own_label=True, |
|
697
|
|
|
visible={ |
|
698
|
|
|
'edit': 'visible', |
|
699
|
|
|
'view': 'visible', |
|
700
|
|
|
'add': 'edit', |
|
701
|
|
|
'secondary': 'disabled', |
|
702
|
|
|
'header_table': 'visible', |
|
703
|
|
|
'sample_registered': {'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
704
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
705
|
|
|
'scheduled_sampling': {'view': 'invisible', 'edit': 'visible'}, |
|
706
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
707
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
708
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
709
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
710
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
711
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
712
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
713
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
714
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
715
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
716
|
|
|
}, |
|
717
|
|
|
catalog_name='bika_setup_catalog', |
|
718
|
|
|
base_query={'inactive_state': 'active'}, |
|
719
|
|
|
showOn=True, |
|
720
|
|
|
), |
|
721
|
|
|
), |
|
722
|
|
|
|
|
723
|
|
|
RecordsField( |
|
724
|
|
|
'RejectionReasons', |
|
725
|
|
|
widget=RejectionWidget( |
|
726
|
|
|
label=_("Sample Rejection"), |
|
727
|
|
|
description=_("Set the Sample Rejection workflow and the reasons"), |
|
728
|
|
|
render_own_label=False, |
|
729
|
|
|
visible={ |
|
730
|
|
|
'edit': 'visible', |
|
731
|
|
|
'view': 'visible', |
|
732
|
|
|
'add': 'edit', |
|
733
|
|
|
'secondary': 'disabled', |
|
734
|
|
|
'header_table': 'visible', |
|
735
|
|
|
'sample_registered': { |
|
736
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
737
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
738
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
739
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
740
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
741
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
742
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
743
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
744
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
745
|
|
|
'published': {'view': 'visible', 'edit': 'visible'}, |
|
746
|
|
|
'invalid': {'view': 'visible', 'edit': 'visible'}, |
|
747
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
748
|
|
|
}, |
|
749
|
|
|
), |
|
750
|
|
|
), |
|
751
|
|
|
|
|
752
|
|
|
ReferenceField( |
|
753
|
|
|
'Specification', |
|
754
|
|
|
required=0, |
|
755
|
|
|
allowed_types='AnalysisSpec', |
|
756
|
|
|
relationship='AnalysisRequestAnalysisSpec', |
|
757
|
|
|
mode="rw", |
|
758
|
|
|
read_permission=View, |
|
759
|
|
|
write_permission=ModifyPortalContent, |
|
760
|
|
|
widget=ReferenceWidget( |
|
761
|
|
|
label=_("Analysis Specification"), |
|
762
|
|
|
description=_("Choose default AR specification values"), |
|
763
|
|
|
size=20, |
|
764
|
|
|
render_own_label=True, |
|
765
|
|
|
visible={ |
|
766
|
|
|
'edit': 'visible', |
|
767
|
|
|
'view': 'visible', |
|
768
|
|
|
'add': 'edit', |
|
769
|
|
|
'header_table': 'visible', |
|
770
|
|
|
'sample_registered': { |
|
771
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
772
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
773
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
774
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
775
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
776
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
777
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
778
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
779
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
780
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
781
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
782
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
783
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
784
|
|
|
}, |
|
785
|
|
|
catalog_name='bika_setup_catalog', |
|
786
|
|
|
colModel=[ |
|
787
|
|
|
{'columnName': 'contextual_title', |
|
788
|
|
|
'width': '30', |
|
789
|
|
|
'label': _('Title'), |
|
790
|
|
|
'align': 'left'}, |
|
791
|
|
|
{'columnName': 'SampleTypeTitle', |
|
792
|
|
|
'width': '70', |
|
793
|
|
|
'label': _('SampleType'), |
|
794
|
|
|
'align': 'left'}, |
|
795
|
|
|
# UID is required in colModel |
|
796
|
|
|
{'columnName': 'UID', 'hidden': True}, |
|
797
|
|
|
], |
|
798
|
|
|
showOn=True, |
|
799
|
|
|
), |
|
800
|
|
|
), |
|
801
|
|
|
|
|
802
|
|
|
# see setResultsRange below. |
|
803
|
|
|
RecordsField( |
|
804
|
|
|
'ResultsRange', |
|
805
|
|
|
required=0, |
|
806
|
|
|
type='resultsrange', |
|
807
|
|
|
subfields=('keyword', 'min', 'max', 'warn_min', 'warn_max', 'hidemin', |
|
808
|
|
|
'hidemax', 'rangecomment', 'min_operator', 'max_operator'), |
|
809
|
|
|
widget=ComputedWidget(visible=False), |
|
810
|
|
|
), |
|
811
|
|
|
|
|
812
|
|
|
ReferenceField( |
|
813
|
|
|
'PublicationSpecification', |
|
814
|
|
|
required=0, |
|
815
|
|
|
allowed_types='AnalysisSpec', |
|
816
|
|
|
relationship='AnalysisRequestPublicationSpec', |
|
817
|
|
|
mode="rw", |
|
818
|
|
|
read_permission=View, |
|
819
|
|
|
write_permission=View, |
|
820
|
|
|
widget=ReferenceWidget( |
|
821
|
|
|
label=_("Publication Specification"), |
|
822
|
|
|
description=_( |
|
823
|
|
|
"Set the specification to be used before publishing an AR."), |
|
824
|
|
|
size=20, |
|
825
|
|
|
render_own_label=True, |
|
826
|
|
|
visible={ |
|
827
|
|
|
'edit': 'visible', |
|
828
|
|
|
'view': 'visible', |
|
829
|
|
|
'header_table': 'visible', |
|
830
|
|
|
'sample_registered': { |
|
831
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
832
|
|
|
'to_be_sampled': {'view': 'invisible', 'edit': 'invisible'}, |
|
833
|
|
|
'scheduled_sampling': { |
|
834
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
835
|
|
|
'sampled': {'view': 'invisible', 'edit': 'invisible'}, |
|
836
|
|
|
'to_be_preserved': {'view': 'invisible', 'edit': 'invisible'}, |
|
837
|
|
|
'sample_due': {'view': 'invisible', 'edit': 'invisible'}, |
|
838
|
|
|
'sample_received': {'view': 'invisible', 'edit': 'invisible'}, |
|
839
|
|
|
'attachment_due': {'view': 'invisible', 'edit': 'invisible'}, |
|
840
|
|
|
'to_be_verified': {'view': 'invisible', 'edit': 'invisible'}, |
|
841
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
842
|
|
|
'published': {'view': 'visible', 'edit': 'visible'}, |
|
843
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
844
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
845
|
|
|
}, |
|
846
|
|
|
catalog_name='bika_setup_catalog', |
|
847
|
|
|
base_query={'inactive_state': 'active'}, |
|
848
|
|
|
showOn=True, |
|
849
|
|
|
), |
|
850
|
|
|
), |
|
851
|
|
|
|
|
852
|
|
|
# Sample field |
|
853
|
|
|
ProxyField( |
|
854
|
|
|
'SamplePoint', |
|
855
|
|
|
proxy="context.getSample()", |
|
856
|
|
|
allowed_types='SamplePoint', |
|
857
|
|
|
relationship='AnalysisRequestSamplePoint', |
|
858
|
|
|
mode="rw", |
|
859
|
|
|
read_permission=View, |
|
860
|
|
|
write_permission=ModifyPortalContent, |
|
861
|
|
|
widget=ReferenceWidget( |
|
862
|
|
|
label=_("Sample Point"), |
|
863
|
|
|
description=_("Location where sample was taken"), |
|
864
|
|
|
size=20, |
|
865
|
|
|
render_own_label=True, |
|
866
|
|
|
visible={ |
|
867
|
|
|
'edit': 'visible', |
|
868
|
|
|
'view': 'visible', |
|
869
|
|
|
'add': 'edit', |
|
870
|
|
|
'secondary': 'disabled', |
|
871
|
|
|
'header_table': 'visible', |
|
872
|
|
|
'sample_registered': { |
|
873
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
874
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
875
|
|
|
# LIMS-1159 |
|
876
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
877
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
878
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
879
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
880
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
881
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
882
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
883
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
884
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
885
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
886
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
887
|
|
|
}, |
|
888
|
|
|
catalog_name='bika_setup_catalog', |
|
889
|
|
|
base_query={'inactive_state': 'active'}, |
|
890
|
|
|
showOn=True, |
|
891
|
|
|
), |
|
892
|
|
|
), |
|
893
|
|
|
|
|
894
|
|
|
# Sample field |
|
895
|
|
|
ProxyField( |
|
896
|
|
|
'StorageLocation', |
|
897
|
|
|
proxy="context.getSample()", |
|
898
|
|
|
allowed_types='StorageLocation', |
|
899
|
|
|
relationship='AnalysisRequestStorageLocation', |
|
900
|
|
|
mode="rw", |
|
901
|
|
|
read_permission=View, |
|
902
|
|
|
write_permission=ModifyPortalContent, |
|
903
|
|
|
widget=ReferenceWidget( |
|
904
|
|
|
label=_("Storage Location"), |
|
905
|
|
|
description=_("Location where sample is kept"), |
|
906
|
|
|
size=20, |
|
907
|
|
|
render_own_label=True, |
|
908
|
|
|
visible={ |
|
909
|
|
|
'edit': 'visible', |
|
910
|
|
|
'view': 'visible', |
|
911
|
|
|
'add': 'edit', |
|
912
|
|
|
'secondary': 'disabled', |
|
913
|
|
|
'header_table': 'visible', |
|
914
|
|
|
'sample_registered': |
|
915
|
|
|
{'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
916
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
917
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
918
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
919
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
920
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
921
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
922
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
923
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
924
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
925
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
926
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
927
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
928
|
|
|
}, |
|
929
|
|
|
catalog_name='bika_setup_catalog', |
|
930
|
|
|
base_query={'inactive_state': 'active'}, |
|
931
|
|
|
showOn=True, |
|
932
|
|
|
), |
|
933
|
|
|
), |
|
934
|
|
|
|
|
935
|
|
|
StringField( |
|
936
|
|
|
'ClientOrderNumber', |
|
937
|
|
|
mode="rw", |
|
938
|
|
|
read_permission=View, |
|
939
|
|
|
write_permission=ModifyPortalContent, |
|
940
|
|
|
widget=StringWidget( |
|
941
|
|
|
label=_("Client Order Number"), |
|
942
|
|
|
description=_("The client side order number for this request"), |
|
943
|
|
|
size=20, |
|
944
|
|
|
render_own_label=True, |
|
945
|
|
|
visible={ |
|
946
|
|
|
'edit': 'visible', |
|
947
|
|
|
'view': 'visible', |
|
948
|
|
|
'add': 'edit', |
|
949
|
|
|
'header_table': 'visible', |
|
950
|
|
|
'sample_registered': { |
|
951
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
952
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
953
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
954
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
955
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
956
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
957
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
958
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
959
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
960
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
961
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
962
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
963
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
964
|
|
|
}, |
|
965
|
|
|
), |
|
966
|
|
|
), |
|
967
|
|
|
|
|
968
|
|
|
# Sample field |
|
969
|
|
|
ProxyField( |
|
970
|
|
|
'ClientReference', |
|
971
|
|
|
proxy="context.getSample()", |
|
972
|
|
|
mode="rw", |
|
973
|
|
|
read_permission=View, |
|
974
|
|
|
write_permission=ModifyPortalContent, |
|
975
|
|
|
widget=StringWidget( |
|
976
|
|
|
label=_("Client Reference"), |
|
977
|
|
|
description=_("The client side reference for this request"), |
|
978
|
|
|
size=20, |
|
979
|
|
|
render_own_label=True, |
|
980
|
|
|
visible={ |
|
981
|
|
|
'edit': 'visible', |
|
982
|
|
|
'view': 'visible', |
|
983
|
|
|
'add': 'edit', |
|
984
|
|
|
'secondary': 'disabled', |
|
985
|
|
|
'header_table': 'visible', |
|
986
|
|
|
'sample_registered': |
|
987
|
|
|
{'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
988
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
989
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
990
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
991
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
992
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
993
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
994
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
995
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
996
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
997
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
998
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
999
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1000
|
|
|
}, |
|
1001
|
|
|
), |
|
1002
|
|
|
), |
|
1003
|
|
|
|
|
1004
|
|
|
# Sample field |
|
1005
|
|
|
ProxyField( |
|
1006
|
|
|
'ClientSampleID', |
|
1007
|
|
|
proxy="context.getSample()", |
|
1008
|
|
|
mode="rw", |
|
1009
|
|
|
read_permission=View, |
|
1010
|
|
|
write_permission=ModifyPortalContent, |
|
1011
|
|
|
widget=StringWidget( |
|
1012
|
|
|
label=_("Client Sample ID"), |
|
1013
|
|
|
description=_("The client side identifier of the sample"), |
|
1014
|
|
|
size=20, |
|
1015
|
|
|
render_own_label=True, |
|
1016
|
|
|
visible={ |
|
1017
|
|
|
'edit': 'visible', |
|
1018
|
|
|
'view': 'visible', |
|
1019
|
|
|
'add': 'edit', |
|
1020
|
|
|
'secondary': 'disabled', |
|
1021
|
|
|
'header_table': 'visible', |
|
1022
|
|
|
'sample_registered': {'view': 'visible', 'edit': 'visible'}, |
|
1023
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1024
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
|
1025
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1026
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
1027
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1028
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1029
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1030
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1031
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1032
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1033
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1034
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1035
|
|
|
}, |
|
1036
|
|
|
), |
|
1037
|
|
|
), |
|
1038
|
|
|
|
|
1039
|
|
|
# Sample field |
|
1040
|
|
|
ProxyField( |
|
1041
|
|
|
'SamplingDeviation', |
|
1042
|
|
|
proxy="context.getSample()", |
|
1043
|
|
|
allowed_types=('SamplingDeviation',), |
|
1044
|
|
|
relationship='AnalysisRequestSamplingDeviation', |
|
1045
|
|
|
referenceClass=HoldingReference, |
|
1046
|
|
|
mode="rw", |
|
1047
|
|
|
read_permission=View, |
|
1048
|
|
|
write_permission=ModifyPortalContent, |
|
1049
|
|
|
widget=ReferenceWidget( |
|
1050
|
|
|
label=_("Sampling Deviation"), |
|
1051
|
|
|
description=_("Deviation between the sample and how it " |
|
1052
|
|
|
"was sampled"), |
|
1053
|
|
|
size=20, |
|
1054
|
|
|
render_own_label=True, |
|
1055
|
|
|
visible={ |
|
1056
|
|
|
'edit': 'visible', |
|
1057
|
|
|
'view': 'visible', |
|
1058
|
|
|
'add': 'edit', |
|
1059
|
|
|
'secondary': 'disabled', |
|
1060
|
|
|
'header_table': 'visible', |
|
1061
|
|
|
'sample_registered': { |
|
1062
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1063
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1064
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1065
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1066
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1067
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
1068
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1069
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1070
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1071
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1072
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1073
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1074
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1075
|
|
|
}, |
|
1076
|
|
|
catalog_name='bika_setup_catalog', |
|
1077
|
|
|
base_query={'inactive_state': 'active'}, |
|
1078
|
|
|
showOn=True, |
|
1079
|
|
|
), |
|
1080
|
|
|
), |
|
1081
|
|
|
|
|
1082
|
|
|
# Sample field |
|
1083
|
|
|
ProxyField( |
|
1084
|
|
|
'SampleCondition', |
|
1085
|
|
|
proxy="context.getSample()", |
|
1086
|
|
|
allowed_types=('SampleCondition',), |
|
1087
|
|
|
relationship='AnalysisRequestSampleCondition', |
|
1088
|
|
|
referenceClass=HoldingReference, |
|
1089
|
|
|
mode="rw", |
|
1090
|
|
|
read_permission=View, |
|
1091
|
|
|
write_permission=ModifyPortalContent, |
|
1092
|
|
|
widget=ReferenceWidget( |
|
1093
|
|
|
label=_("Sample condition"), |
|
1094
|
|
|
description=_("The current condition of the sample"), |
|
1095
|
|
|
size=20, |
|
1096
|
|
|
render_own_label=True, |
|
1097
|
|
|
visible={ |
|
1098
|
|
|
'edit': 'visible', |
|
1099
|
|
|
'view': 'visible', |
|
1100
|
|
|
'add': 'edit', |
|
1101
|
|
|
'secondary': 'disabled', |
|
1102
|
|
|
'header_table': 'visible', |
|
1103
|
|
|
'sample_registered': { |
|
1104
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1105
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1106
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1107
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1108
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1109
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
1110
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1111
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1112
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1113
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1114
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1115
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1116
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1117
|
|
|
}, |
|
1118
|
|
|
catalog_name='bika_setup_catalog', |
|
1119
|
|
|
base_query={'inactive_state': 'active'}, |
|
1120
|
|
|
showOn=True, |
|
1121
|
|
|
), |
|
1122
|
|
|
), |
|
1123
|
|
|
|
|
1124
|
|
|
StringField( |
|
1125
|
|
|
'Priority', |
|
1126
|
|
|
default='3', |
|
1127
|
|
|
vocabulary=PRIORITIES, |
|
1128
|
|
|
mode='rw', |
|
1129
|
|
|
read_permission=View, |
|
1130
|
|
|
write_permission=ModifyPortalContent, |
|
1131
|
|
|
widget=PrioritySelectionWidget( |
|
1132
|
|
|
label=_('Priority'), |
|
1133
|
|
|
format='select', |
|
1134
|
|
|
visible={ |
|
1135
|
|
|
'edit': 'visible', |
|
1136
|
|
|
'view': 'visible', |
|
1137
|
|
|
'add': 'edit', |
|
1138
|
|
|
'header_table': 'visible', |
|
1139
|
|
|
'sample_registered': |
|
1140
|
|
|
{'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1141
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1142
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1143
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1144
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1145
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
1146
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
1147
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
1148
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
1149
|
|
|
'verified': {'view': 'visible', 'edit': 'visible'}, |
|
1150
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1151
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1152
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1153
|
|
|
}, |
|
1154
|
|
|
), |
|
1155
|
|
|
), |
|
1156
|
|
|
# Sample field |
|
1157
|
|
|
ProxyField( |
|
1158
|
|
|
'EnvironmentalConditions', |
|
1159
|
|
|
proxy="context.getSample()", |
|
1160
|
|
|
mode="rw", |
|
1161
|
|
|
read_permission=View, |
|
1162
|
|
|
write_permission=ModifyPortalContent, |
|
1163
|
|
|
widget=StringWidget( |
|
1164
|
|
|
label=_("Environmental conditions"), |
|
1165
|
|
|
description=_("The environmental condition during sampling"), |
|
1166
|
|
|
visible={ |
|
1167
|
|
|
'edit': 'visible', |
|
1168
|
|
|
'view': 'visible', |
|
1169
|
|
|
'add': 'edit', |
|
1170
|
|
|
'header_table': 'prominent', |
|
1171
|
|
|
'sample_registered': { |
|
1172
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1173
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1174
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1175
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1176
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1177
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
1178
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
1179
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
1180
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1181
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1182
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1183
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1184
|
|
|
}, |
|
1185
|
|
|
render_own_label=True, |
|
1186
|
|
|
size=20, |
|
1187
|
|
|
), |
|
1188
|
|
|
), |
|
1189
|
|
|
|
|
1190
|
|
|
ReferenceField( |
|
1191
|
|
|
'DefaultContainerType', |
|
1192
|
|
|
allowed_types=('ContainerType',), |
|
1193
|
|
|
relationship='AnalysisRequestContainerType', |
|
1194
|
|
|
referenceClass=HoldingReference, |
|
1195
|
|
|
mode="rw", |
|
1196
|
|
|
read_permission=View, |
|
1197
|
|
|
write_permission=ModifyPortalContent, |
|
1198
|
|
|
widget=ReferenceWidget( |
|
1199
|
|
|
label=_("Default Container"), |
|
1200
|
|
|
description=_("Default container for new sample partitions"), |
|
1201
|
|
|
size=20, |
|
1202
|
|
|
render_own_label=True, |
|
1203
|
|
|
visible={ |
|
1204
|
|
|
'edit': 'visible', |
|
1205
|
|
|
'view': 'visible', |
|
1206
|
|
|
'add': 'edit', |
|
1207
|
|
|
'secondary': 'disabled', |
|
1208
|
|
|
'header_table': 'visible', |
|
1209
|
|
|
'sample_registered': { |
|
1210
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1211
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1212
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
|
1213
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1214
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
1215
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1216
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1217
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1218
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1219
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1220
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1221
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1222
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1223
|
|
|
}, |
|
1224
|
|
|
catalog_name='bika_setup_catalog', |
|
1225
|
|
|
base_query={'inactive_state': 'active'}, |
|
1226
|
|
|
showOn=True, |
|
1227
|
|
|
), |
|
1228
|
|
|
), |
|
1229
|
|
|
|
|
1230
|
|
|
# Sample field |
|
1231
|
|
|
ProxyField( |
|
1232
|
|
|
'AdHoc', |
|
1233
|
|
|
proxy="context.getSample()", |
|
1234
|
|
|
default=False, |
|
1235
|
|
|
mode="rw", |
|
1236
|
|
|
read_permission=View, |
|
1237
|
|
|
write_permission=ModifyPortalContent, |
|
1238
|
|
|
widget=BooleanWidget( |
|
1239
|
|
|
label=_("Sampled AdHoc"), |
|
1240
|
|
|
description=_("Was the sample taken in non-scheduled matter, " \ |
|
1241
|
|
|
"e.g. out of a recurring sampling schedule?"), |
|
1242
|
|
|
render_own_label=True, |
|
1243
|
|
|
visible={ |
|
1244
|
|
|
'edit': 'visible', |
|
1245
|
|
|
'view': 'visible', |
|
1246
|
|
|
'add': 'edit', |
|
1247
|
|
|
'secondary': 'disabled', |
|
1248
|
|
|
'header_table': 'visible', |
|
1249
|
|
|
'sample_registered': |
|
1250
|
|
|
{'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1251
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1252
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'invisible'}, |
|
1253
|
|
|
'sampled': {'view': 'visible', 'edit': 'invisible'}, |
|
1254
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'invisible'}, |
|
1255
|
|
|
'sample_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1256
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1257
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1258
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1259
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1260
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1261
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1262
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1263
|
|
|
}, |
|
1264
|
|
|
), |
|
1265
|
|
|
), |
|
1266
|
|
|
|
|
1267
|
|
|
# Sample field |
|
1268
|
|
|
ProxyField( |
|
1269
|
|
|
'Composite', |
|
1270
|
|
|
proxy="context.getSample()", |
|
1271
|
|
|
default=False, |
|
1272
|
|
|
mode="rw", |
|
1273
|
|
|
read_permission=View, |
|
1274
|
|
|
write_permission=ModifyPortalContent, |
|
1275
|
|
|
widget=BooleanWidget( |
|
1276
|
|
|
label=_("Composite"), |
|
1277
|
|
|
render_own_label=True, |
|
1278
|
|
|
visible={ |
|
1279
|
|
|
'edit': 'visible', |
|
1280
|
|
|
'view': 'visible', |
|
1281
|
|
|
'add': 'edit', |
|
1282
|
|
|
'secondary': 'disabled', |
|
1283
|
|
|
'header_table': 'visible', |
|
1284
|
|
|
'sample_registered': { |
|
1285
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1286
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1287
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1288
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1289
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1290
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
1291
|
|
|
'sample_received': {'view': 'visible', 'edit': 'visible'}, |
|
1292
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'visible'}, |
|
1293
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'visible'}, |
|
1294
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1295
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1296
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1297
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1298
|
|
|
}, |
|
1299
|
|
|
), |
|
1300
|
|
|
), |
|
1301
|
|
|
|
|
1302
|
|
|
BooleanField( |
|
1303
|
|
|
'InvoiceExclude', |
|
1304
|
|
|
default=False, |
|
1305
|
|
|
mode="rw", |
|
1306
|
|
|
read_permission=View, |
|
1307
|
|
|
write_permission=ModifyPortalContent, |
|
1308
|
|
|
widget=BooleanWidget( |
|
1309
|
|
|
label=_("Invoice Exclude"), |
|
1310
|
|
|
description=_("Should the analyses be excluded from the invoice?"), |
|
1311
|
|
|
render_own_label=True, |
|
1312
|
|
|
visible={ |
|
1313
|
|
|
'edit': 'visible', |
|
1314
|
|
|
'view': 'visible', |
|
1315
|
|
|
'add': 'edit', |
|
1316
|
|
|
'header_table': 'visible', |
|
1317
|
|
|
'sample_registered': { |
|
1318
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'edit'}, |
|
1319
|
|
|
'to_be_sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1320
|
|
|
'scheduled_sampling': {'view': 'visible', 'edit': 'visible'}, |
|
1321
|
|
|
'sampled': {'view': 'visible', 'edit': 'visible'}, |
|
1322
|
|
|
'to_be_preserved': {'view': 'visible', 'edit': 'visible'}, |
|
1323
|
|
|
'sample_due': {'view': 'visible', 'edit': 'visible'}, |
|
1324
|
|
|
'sample_received': {'view': 'visible', 'edit': 'invisible'}, |
|
1325
|
|
|
'attachment_due': {'view': 'visible', 'edit': 'invisible'}, |
|
1326
|
|
|
'to_be_verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1327
|
|
|
'verified': {'view': 'visible', 'edit': 'invisible'}, |
|
1328
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1329
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1330
|
|
|
'rejected': {'view': 'visible', 'edit': 'invisible'}, |
|
1331
|
|
|
}, |
|
1332
|
|
|
), |
|
1333
|
|
|
), |
|
1334
|
|
|
|
|
1335
|
|
|
ARAnalysesField( |
|
1336
|
|
|
'Analyses', |
|
1337
|
|
|
required=1, |
|
1338
|
|
|
mode="rw", |
|
1339
|
|
|
read_permission=View, |
|
1340
|
|
|
write_permission=ModifyPortalContent, |
|
1341
|
|
|
widget=ComputedWidget( |
|
1342
|
|
|
visible={ |
|
1343
|
|
|
'edit': 'invisible', |
|
1344
|
|
|
'view': 'invisible', |
|
1345
|
|
|
'sample_registered': { |
|
1346
|
|
|
'view': 'visible', 'edit': 'visible', 'add': 'invisible'}, |
|
1347
|
|
|
} |
|
1348
|
|
|
), |
|
1349
|
|
|
), |
|
1350
|
|
|
|
|
1351
|
|
|
ReferenceField( |
|
1352
|
|
|
'Attachment', |
|
1353
|
|
|
multiValued=1, |
|
1354
|
|
|
allowed_types=('Attachment',), |
|
1355
|
|
|
referenceClass=HoldingReference, |
|
1356
|
|
|
relationship='AnalysisRequestAttachment', |
|
1357
|
|
|
mode="rw", |
|
1358
|
|
|
read_permission=View, |
|
1359
|
|
|
write_permission=ModifyPortalContent, |
|
1360
|
|
|
widget=ComputedWidget( |
|
1361
|
|
|
visible={ |
|
1362
|
|
|
'edit': 'invisible', |
|
1363
|
|
|
'view': 'invisible', |
|
1364
|
|
|
}, |
|
1365
|
|
|
) |
|
1366
|
|
|
), |
|
1367
|
|
|
|
|
1368
|
|
|
# This is a virtual field and handled only by AR Add View to allow multi |
|
1369
|
|
|
# attachment upload in AR Add. It should never contain an own value! |
|
1370
|
|
|
FileField( |
|
1371
|
|
|
'_ARAttachment', |
|
1372
|
|
|
widget=FileWidget( |
|
1373
|
|
|
label=_("Attachment"), |
|
1374
|
|
|
description=_("Add one or more attachments to describe the " |
|
1375
|
|
|
"sample in this analysis request, or to specify " |
|
1376
|
|
|
"your request."), |
|
1377
|
|
|
render_own_label=True, |
|
1378
|
|
|
visible={ |
|
1379
|
|
|
'view': 'invisible', |
|
1380
|
|
|
'add': 'edit', |
|
1381
|
|
|
'header_table': 'invisible', |
|
1382
|
|
|
}, |
|
1383
|
|
|
) |
|
1384
|
|
|
), |
|
1385
|
|
|
|
|
1386
|
|
|
ReferenceField( |
|
1387
|
|
|
'Invoice', |
|
1388
|
|
|
vocabulary_display_path_bound=sys.maxsize, |
|
1389
|
|
|
allowed_types=('Invoice',), |
|
1390
|
|
|
referenceClass=HoldingReference, |
|
1391
|
|
|
relationship='AnalysisRequestInvoice', |
|
1392
|
|
|
mode="rw", |
|
1393
|
|
|
read_permission=View, |
|
1394
|
|
|
write_permission=ModifyPortalContent, |
|
1395
|
|
|
widget=ComputedWidget( |
|
1396
|
|
|
visible={ |
|
1397
|
|
|
'edit': 'invisible', |
|
1398
|
|
|
'view': 'invisible', |
|
1399
|
|
|
}, |
|
1400
|
|
|
) |
|
1401
|
|
|
), |
|
1402
|
|
|
# This field is a mirror of a field in Sample with the same name |
|
1403
|
|
|
ProxyField( |
|
1404
|
|
|
'DateReceived', |
|
1405
|
|
|
proxy="context.getSample()", |
|
1406
|
|
|
mode="rw", |
|
1407
|
|
|
read_permission=View, |
|
1408
|
|
|
write_permission=ModifyPortalContent, |
|
1409
|
|
|
widget=DateTimeWidget( |
|
1410
|
|
|
label=_("Date Sample Received"), |
|
1411
|
|
|
show_time=True, |
|
1412
|
|
|
description=_("The date when the sample was received"), |
|
1413
|
|
|
render_own_label=True, |
|
1414
|
|
|
visible={ |
|
1415
|
|
|
'edit': 'invisible', |
|
1416
|
|
|
'view': 'visible', |
|
1417
|
|
|
'header_table': 'visible', |
|
1418
|
|
|
}, |
|
1419
|
|
|
), |
|
1420
|
|
|
), |
|
1421
|
|
|
ComputedField( |
|
1422
|
|
|
'DatePublished', |
|
1423
|
|
|
mode="r", |
|
1424
|
|
|
read_permission=View, |
|
1425
|
|
|
expression="here.getDatePublished().strftime('%Y-%m-%d %H:%M %p') if here.getDatePublished() else ''", |
|
1426
|
|
|
widget=DateTimeWidget( |
|
1427
|
|
|
label=_("Date Published"), |
|
1428
|
|
|
visible={ |
|
1429
|
|
|
'edit': 'visible', |
|
1430
|
|
|
'view': 'visible', |
|
1431
|
|
|
'add': 'invisible', |
|
1432
|
|
|
'secondary': 'invisible', |
|
1433
|
|
|
'header_table': 'visible', |
|
1434
|
|
|
'sample_registered': { |
|
1435
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
1436
|
|
|
'to_be_sampled': {'view': 'invisible', 'edit': 'invisible'}, |
|
1437
|
|
|
'scheduled_sampling': { |
|
1438
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
1439
|
|
|
'sampled': {'view': 'invisible', 'edit': 'invisible'}, |
|
1440
|
|
|
'to_be_preserved': {'view': 'invisible', 'edit': 'invisible'}, |
|
1441
|
|
|
'sample_due': {'view': 'invisible', 'edit': 'invisible'}, |
|
1442
|
|
|
'sample_received': {'view': 'invisible', 'edit': 'invisible'}, |
|
1443
|
|
|
'attachment_due': {'view': 'invisible', 'edit': 'invisible'}, |
|
1444
|
|
|
'to_be_verified': {'view': 'invisible', 'edit': 'invisible'}, |
|
1445
|
|
|
'verified': {'view': 'invisible', 'edit': 'invisible'}, |
|
1446
|
|
|
'published': {'view': 'visible', 'edit': 'invisible'}, |
|
1447
|
|
|
'invalid': {'view': 'visible', 'edit': 'invisible'}, |
|
1448
|
|
|
'rejected': {'view': 'invisible', 'edit': 'invisible'}, |
|
1449
|
|
|
}, |
|
1450
|
|
|
), |
|
1451
|
|
|
), |
|
1452
|
|
|
|
|
1453
|
|
|
RemarksField( |
|
1454
|
|
|
'Remarks', |
|
1455
|
|
|
searchable=True, |
|
1456
|
|
|
widget=RemarksWidget( |
|
1457
|
|
|
label=_("Remarks"), |
|
1458
|
|
|
description=_("Remarks and comments for this request"), |
|
1459
|
|
|
render_own_label=True, |
|
1460
|
|
|
visible={ |
|
1461
|
|
|
'edit': 'visible', |
|
1462
|
|
|
'view': 'visible', |
|
1463
|
|
|
'add': 'edit' |
|
1464
|
|
|
}, |
|
1465
|
|
|
), |
|
1466
|
|
|
), |
|
1467
|
|
|
|
|
1468
|
|
|
FixedPointField( |
|
1469
|
|
|
'MemberDiscount', |
|
1470
|
|
|
default_method='getDefaultMemberDiscount', |
|
1471
|
|
|
mode="rw", |
|
1472
|
|
|
read_permission=View, |
|
1473
|
|
|
write_permission=ModifyPortalContent, |
|
1474
|
|
|
widget=DecimalWidget( |
|
1475
|
|
|
label=_("Member discount %"), |
|
1476
|
|
|
description=_("Enter percentage value eg. 33.0"), |
|
1477
|
|
|
render_own_label=True, |
|
1478
|
|
|
visible={ |
|
1479
|
|
|
'edit': 'visible', |
|
1480
|
|
|
'view': 'visible', |
|
1481
|
|
|
'add': 'invisible', |
|
1482
|
|
|
'sample_registered': { |
|
1483
|
|
|
'view': 'invisible', 'edit': 'invisible'}, |
|
1484
|
|
|
}, |
|
1485
|
|
|
), |
|
1486
|
|
|
), |
|
1487
|
|
|
# TODO-catalog: move all these computed fields to methods |
|
1488
|
|
|
ComputedField( |
|
1489
|
|
|
'ClientUID', |
|
1490
|
|
|
expression='here.aq_parent.UID()', |
|
1491
|
|
|
widget=ComputedWidget( |
|
1492
|
|
|
visible=False, |
|
1493
|
|
|
), |
|
1494
|
|
|
), |
|
1495
|
|
|
|
|
1496
|
|
|
ComputedField( |
|
1497
|
|
|
'SampleTypeTitle', |
|
1498
|
|
|
expression="here.getSampleType().Title() if here.getSampleType() " |
|
1499
|
|
|
"else ''", |
|
1500
|
|
|
widget=ComputedWidget( |
|
1501
|
|
|
visible=False, |
|
1502
|
|
|
), |
|
1503
|
|
|
), |
|
1504
|
|
|
|
|
1505
|
|
|
ComputedField( |
|
1506
|
|
|
'SamplePointTitle', |
|
1507
|
|
|
expression="here.getSamplePoint().Title() if here.getSamplePoint() " |
|
1508
|
|
|
"else ''", |
|
1509
|
|
|
widget=ComputedWidget( |
|
1510
|
|
|
visible=False, |
|
1511
|
|
|
), |
|
1512
|
|
|
), |
|
1513
|
|
|
|
|
1514
|
|
|
ComputedField( |
|
1515
|
|
|
'SampleUID', |
|
1516
|
|
|
expression="here.getSample() and here.getSample().UID() or ''", |
|
1517
|
|
|
widget=ComputedWidget( |
|
1518
|
|
|
visible=False, |
|
1519
|
|
|
), |
|
1520
|
|
|
), |
|
1521
|
|
|
|
|
1522
|
|
|
ComputedField( |
|
1523
|
|
|
'SampleID', |
|
1524
|
|
|
expression="here.getSample() and here.getSample().getId() or ''", |
|
1525
|
|
|
widget=ComputedWidget( |
|
1526
|
|
|
visible=False, |
|
1527
|
|
|
), |
|
1528
|
|
|
), |
|
1529
|
|
|
|
|
1530
|
|
|
ComputedField( |
|
1531
|
|
|
'ContactUID', |
|
1532
|
|
|
expression="here.getContact() and here.getContact().UID() or ''", |
|
1533
|
|
|
widget=ComputedWidget( |
|
1534
|
|
|
visible=False, |
|
1535
|
|
|
), |
|
1536
|
|
|
), |
|
1537
|
|
|
|
|
1538
|
|
|
ComputedField( |
|
1539
|
|
|
'ProfilesUID', |
|
1540
|
|
|
expression="[p.UID() for p in here.getProfiles()] " \ |
|
1541
|
|
|
"if here.getProfiles() else []", |
|
1542
|
|
|
widget=ComputedWidget( |
|
1543
|
|
|
visible=False, |
|
1544
|
|
|
), |
|
1545
|
|
|
), |
|
1546
|
|
|
|
|
1547
|
|
|
ComputedField( |
|
1548
|
|
|
'Invoiced', |
|
1549
|
|
|
expression='here.getInvoice() and True or False', |
|
1550
|
|
|
default=False, |
|
1551
|
|
|
widget=ComputedWidget( |
|
1552
|
|
|
visible=False, |
|
1553
|
|
|
), |
|
1554
|
|
|
), |
|
1555
|
|
|
ComputedField( |
|
1556
|
|
|
'ReceivedBy', |
|
1557
|
|
|
expression='here.getReceivedBy()', |
|
1558
|
|
|
default='', |
|
1559
|
|
|
widget=ComputedWidget(visible=False,), |
|
1560
|
|
|
), |
|
1561
|
|
|
ComputedField( |
|
1562
|
|
|
'CreatorFullName', |
|
1563
|
|
|
expression="here._getCreatorFullName()", |
|
1564
|
|
|
widget=ComputedWidget(visible=False), |
|
1565
|
|
|
), |
|
1566
|
|
|
ComputedField( |
|
1567
|
|
|
'CreatorEmail', |
|
1568
|
|
|
expression="here._getCreatorEmail()", |
|
1569
|
|
|
widget=ComputedWidget(visible=False), |
|
1570
|
|
|
), |
|
1571
|
|
|
ComputedField( |
|
1572
|
|
|
'SamplingRoundUID', |
|
1573
|
|
|
expression="here.getSamplingRound().UID() " \ |
|
1574
|
|
|
"if here.getSamplingRound() else ''", |
|
1575
|
|
|
widget=ComputedWidget(visible=False), |
|
1576
|
|
|
), |
|
1577
|
|
|
ComputedField( |
|
1578
|
|
|
'SampleURL', |
|
1579
|
|
|
expression="here.getSample().absolute_url_path() " \ |
|
1580
|
|
|
"if here.getSample() else ''", |
|
1581
|
|
|
widget=ComputedWidget(visible=False), |
|
1582
|
|
|
), |
|
1583
|
|
|
ComputedField( |
|
1584
|
|
|
'SamplerFullName', |
|
1585
|
|
|
expression="here._getSamplerFullName()", |
|
1586
|
|
|
widget=ComputedWidget(visible=False), |
|
1587
|
|
|
), |
|
1588
|
|
|
ComputedField( |
|
1589
|
|
|
'SamplerEmail', |
|
1590
|
|
|
expression="here._getSamplerEmail()", |
|
1591
|
|
|
widget=ComputedWidget(visible=False), |
|
1592
|
|
|
), |
|
1593
|
|
|
ComputedField( |
|
1594
|
|
|
'BatchID', |
|
1595
|
|
|
expression="here.getBatch().getId() if here.getBatch() else ''", |
|
1596
|
|
|
widget=ComputedWidget(visible=False), |
|
1597
|
|
|
), |
|
1598
|
|
|
ComputedField( |
|
1599
|
|
|
'BatchURL', |
|
1600
|
|
|
expression="here.getBatch().absolute_url_path() " \ |
|
1601
|
|
|
"if here.getBatch() else ''", |
|
1602
|
|
|
widget=ComputedWidget(visible=False), |
|
1603
|
|
|
), |
|
1604
|
|
|
ComputedField( |
|
1605
|
|
|
'ClientUID', |
|
1606
|
|
|
expression="here.getClient().UID() if here.getClient() else ''", |
|
1607
|
|
|
widget=ComputedWidget(visible=False), |
|
1608
|
|
|
), |
|
1609
|
|
|
ComputedField( |
|
1610
|
|
|
'ClientTitle', |
|
1611
|
|
|
expression="here.getClient().Title() if here.getClient() else ''", |
|
1612
|
|
|
widget=ComputedWidget(visible=False), |
|
1613
|
|
|
), |
|
1614
|
|
|
ComputedField( |
|
1615
|
|
|
'ClientURL', |
|
1616
|
|
|
expression="here.getClient().absolute_url_path() " \ |
|
1617
|
|
|
"if here.getClient() else ''", |
|
1618
|
|
|
widget=ComputedWidget(visible=False), |
|
1619
|
|
|
), |
|
1620
|
|
|
ComputedField( |
|
1621
|
|
|
'ContactUsername', |
|
1622
|
|
|
expression="here.getContact().getUsername() " \ |
|
1623
|
|
|
"if here.getContact() else ''", |
|
1624
|
|
|
widget=ComputedWidget(visible=False), |
|
1625
|
|
|
), |
|
1626
|
|
|
ComputedField( |
|
1627
|
|
|
'ContactFullName', |
|
1628
|
|
|
expression="here.getContact().getFullname() " \ |
|
1629
|
|
|
"if here.getContact() else ''", |
|
1630
|
|
|
widget=ComputedWidget(visible=False), |
|
1631
|
|
|
), |
|
1632
|
|
|
ComputedField( |
|
1633
|
|
|
'ContactEmail', |
|
1634
|
|
|
expression="here.getContact().getEmailAddress() " \ |
|
1635
|
|
|
"if here.getContact() else ''", |
|
1636
|
|
|
widget=ComputedWidget(visible=False), |
|
1637
|
|
|
), |
|
1638
|
|
|
ComputedField( |
|
1639
|
|
|
'SampleTypeUID', |
|
1640
|
|
|
expression="here.getSampleType().UID() " \ |
|
1641
|
|
|
"if here.getSampleType() else ''", |
|
1642
|
|
|
widget=ComputedWidget(visible=False), |
|
1643
|
|
|
), |
|
1644
|
|
|
ComputedField( |
|
1645
|
|
|
'SamplePointUID', |
|
1646
|
|
|
expression="here.getSamplePoint().UID() " \ |
|
1647
|
|
|
"if here.getSamplePoint() else ''", |
|
1648
|
|
|
widget=ComputedWidget(visible=False), |
|
1649
|
|
|
), |
|
1650
|
|
|
ComputedField( |
|
1651
|
|
|
'StorageLocationUID', |
|
1652
|
|
|
expression="here.getStorageLocation().UID() " \ |
|
1653
|
|
|
"if here.getStorageLocation() else ''", |
|
1654
|
|
|
widget=ComputedWidget(visible=False), |
|
1655
|
|
|
), |
|
1656
|
|
|
ComputedField( |
|
1657
|
|
|
'ProfilesURL', |
|
1658
|
|
|
expression="[p.absolute_url_path() for p in here.getProfiles()] " \ |
|
1659
|
|
|
"if here.getProfiles() else []", |
|
1660
|
|
|
widget=ComputedWidget(visible=False), |
|
1661
|
|
|
), |
|
1662
|
|
|
ComputedField( |
|
1663
|
|
|
'ProfilesTitle', |
|
1664
|
|
|
expression="[p.Title() for p in here.getProfiles()] " \ |
|
1665
|
|
|
"if here.getProfiles() else []", |
|
1666
|
|
|
widget=ComputedWidget(visible=False), |
|
1667
|
|
|
), |
|
1668
|
|
|
ComputedField( |
|
1669
|
|
|
'ProfilesTitleStr', |
|
1670
|
|
|
expression="', '.join([p.Title() for p in here.getProfiles()]) " \ |
|
1671
|
|
|
"if here.getProfiles() else ''", |
|
1672
|
|
|
widget=ComputedWidget(visible=False), |
|
1673
|
|
|
), |
|
1674
|
|
|
ComputedField( |
|
1675
|
|
|
'TemplateUID', |
|
1676
|
|
|
expression="here.getTemplate().UID() if here.getTemplate() else ''", |
|
1677
|
|
|
widget=ComputedWidget(visible=False), |
|
1678
|
|
|
), |
|
1679
|
|
|
ComputedField( |
|
1680
|
|
|
'TemplateURL', |
|
1681
|
|
|
expression="here.getTemplate().absolute_url_path() " \ |
|
1682
|
|
|
"if here.getTemplate() else ''", |
|
1683
|
|
|
widget=ComputedWidget(visible=False), |
|
1684
|
|
|
), |
|
1685
|
|
|
ComputedField( |
|
1686
|
|
|
'TemplateTitle', |
|
1687
|
|
|
expression="here.getTemplate().Title() if here.getTemplate() else ''", |
|
1688
|
|
|
widget=ComputedWidget(visible=False), |
|
1689
|
|
|
), |
|
1690
|
|
|
|
|
1691
|
|
|
ReferenceField( |
|
1692
|
|
|
'ParentAnalysisRequest', |
|
1693
|
|
|
allowed_types=('AnalysisRequest',), |
|
1694
|
|
|
relationship='AnalysisRequestParentAnalysisRequest', |
|
1695
|
|
|
referenceClass=HoldingReference, |
|
1696
|
|
|
mode="rw", |
|
1697
|
|
|
read_permission=View, |
|
1698
|
|
|
write_permission=ModifyPortalContent, |
|
1699
|
|
|
widget=ReferenceWidget( |
|
1700
|
|
|
visible=False, |
|
1701
|
|
|
), |
|
1702
|
|
|
), |
|
1703
|
|
|
|
|
1704
|
|
|
# The Analysis Request the current Analysis Request comes from because of |
|
1705
|
|
|
# an invalidation of the former |
|
1706
|
|
|
ReferenceField( |
|
1707
|
|
|
'Invalidated', |
|
1708
|
|
|
allowed_types=('AnalysisRequest',), |
|
1709
|
|
|
relationship='AnalysisRequestRetracted', |
|
1710
|
|
|
referenceClass=HoldingReference, |
|
1711
|
|
|
mode="rw", |
|
1712
|
|
|
read_permission=View, |
|
1713
|
|
|
write_permission=ModifyPortalContent, |
|
1714
|
|
|
widget=ReferenceWidget( |
|
1715
|
|
|
visible=False, |
|
1716
|
|
|
), |
|
1717
|
|
|
), |
|
1718
|
|
|
|
|
1719
|
|
|
# The Analysis Request that was automatically generated due to the |
|
1720
|
|
|
# invalidation of the current Analysis Request |
|
1721
|
|
|
ComputedField( |
|
1722
|
|
|
'Retest', |
|
1723
|
|
|
expression="here.get_retest()", |
|
1724
|
|
|
widget=ComputedWidget(visible=False) |
|
1725
|
|
|
), |
|
1726
|
|
|
|
|
1727
|
|
|
# For comments or results interpretation |
|
1728
|
|
|
# Old one, to be removed because of the incorporation of |
|
1729
|
|
|
# ResultsInterpretationDepts (due to LIMS-1628) |
|
1730
|
|
|
TextField( |
|
1731
|
|
|
'ResultsInterpretation', |
|
1732
|
|
|
mode="rw", |
|
1733
|
|
|
default_content_type='text/html', |
|
1734
|
|
|
# Input content type for the textfield |
|
1735
|
|
|
default_output_type='text/x-html-safe', |
|
1736
|
|
|
# getResultsInterpretation returns a str with html tags |
|
1737
|
|
|
# to conserve the txt format in the report. |
|
1738
|
|
|
read_permission=View, |
|
1739
|
|
|
write_permission=ModifyPortalContent, |
|
1740
|
|
|
widget=RichWidget( |
|
1741
|
|
|
description=_("Comments or results interpretation"), |
|
1742
|
|
|
label=_("Results Interpretation"), |
|
1743
|
|
|
size=10, |
|
1744
|
|
|
allow_file_upload=False, |
|
1745
|
|
|
default_mime_type='text/x-rst', |
|
1746
|
|
|
output_mime_type='text/x-html', |
|
1747
|
|
|
rows=3, |
|
1748
|
|
|
visible=False), |
|
1749
|
|
|
), |
|
1750
|
|
|
|
|
1751
|
|
|
RecordsField('ResultsInterpretationDepts', |
|
1752
|
|
|
subfields=('uid', |
|
1753
|
|
|
'richtext'), |
|
1754
|
|
|
subfield_labels={'uid': _('Department'), |
|
1755
|
|
|
'richtext': _('Results Interpreation')}, |
|
1756
|
|
|
widget=RichWidget(visible=False), |
|
1757
|
|
|
), |
|
1758
|
|
|
# Custom settings for the assigned analysis services |
|
1759
|
|
|
# https://jira.bikalabs.com/browse/LIMS-1324 |
|
1760
|
|
|
# Fields: |
|
1761
|
|
|
# - uid: Analysis Service UID |
|
1762
|
|
|
# - hidden: True/False. Hide/Display in results reports |
|
1763
|
|
|
RecordsField('AnalysisServicesSettings', |
|
1764
|
|
|
required=0, |
|
1765
|
|
|
subfields=('uid', 'hidden',), |
|
1766
|
|
|
widget=ComputedWidget(visible=False), |
|
1767
|
|
|
), |
|
1768
|
|
|
StringField( |
|
1769
|
|
|
'Printed', |
|
1770
|
|
|
mode="rw", |
|
1771
|
|
|
read_permission=View, |
|
1772
|
|
|
widget=StringWidget( |
|
1773
|
|
|
label=_("Printed"), |
|
1774
|
|
|
description=_("Indicates if the last ARReport is printed,"), |
|
1775
|
|
|
visible={'view': 'invisible', |
|
1776
|
|
|
'edit': 'invisible'}, |
|
1777
|
|
|
), |
|
1778
|
|
|
), |
|
1779
|
|
|
) |
|
1780
|
|
|
) |
|
1781
|
|
|
|
|
1782
|
|
|
|
|
1783
|
|
|
# Some schema rearrangement |
|
1784
|
|
|
schema['title'].required = False |
|
1785
|
|
|
schema['id'].widget.visible = { |
|
1786
|
|
|
'edit': 'invisible', |
|
1787
|
|
|
'view': 'invisible', |
|
1788
|
|
|
} |
|
1789
|
|
|
schema['title'].widget.visible = { |
|
1790
|
|
|
'edit': 'invisible', |
|
1791
|
|
|
'view': 'invisible', |
|
1792
|
|
|
} |
|
1793
|
|
|
schema.moveField('Client', before='Contact') |
|
1794
|
|
|
schema.moveField('ResultsInterpretation', pos='bottom') |
|
1795
|
|
|
schema.moveField('ResultsInterpretationDepts', pos='bottom') |
|
1796
|
|
|
|
|
1797
|
|
|
|
|
1798
|
|
|
class AnalysisRequest(BaseFolder): |
|
1799
|
|
|
implements(IAnalysisRequest) |
|
1800
|
|
|
security = ClassSecurityInfo() |
|
1801
|
|
|
displayContentsTab = False |
|
1802
|
|
|
schema = schema |
|
|
|
|
|
|
1803
|
|
|
|
|
1804
|
|
|
_at_rename_after_creation = True |
|
1805
|
|
|
|
|
1806
|
|
|
def _renameAfterCreation(self, check_auto_id=False): |
|
1807
|
|
|
from bika.lims.idserver import renameAfterCreation |
|
1808
|
|
|
renameAfterCreation(self) |
|
1809
|
|
|
|
|
1810
|
|
|
def _getCatalogTool(self): |
|
1811
|
|
|
from bika.lims.catalog import getCatalog |
|
1812
|
|
|
return getCatalog(self) |
|
1813
|
|
|
|
|
1814
|
|
|
def Title(self): |
|
1815
|
|
|
""" Return the Request ID as title """ |
|
1816
|
|
|
return self.getId() |
|
1817
|
|
|
|
|
1818
|
|
|
def sortable_title(self): |
|
1819
|
|
|
""" |
|
1820
|
|
|
Some lists expects this index |
|
1821
|
|
|
""" |
|
1822
|
|
|
return self.getId() |
|
1823
|
|
|
|
|
1824
|
|
|
def Description(self): |
|
1825
|
|
|
"""Returns searchable data as Description""" |
|
1826
|
|
|
descr = " ".join((self.getId(), self.aq_parent.Title())) |
|
1827
|
|
|
return safe_unicode(descr).encode('utf-8') |
|
1828
|
|
|
|
|
1829
|
|
|
def getClient(self): |
|
1830
|
|
|
if self.aq_parent.portal_type == 'Client': |
|
1831
|
|
|
return self.aq_parent |
|
1832
|
|
|
if self.aq_parent.portal_type == 'Batch': |
|
1833
|
|
|
return self.aq_parent.getClient() |
|
1834
|
|
|
return '' |
|
1835
|
|
|
|
|
1836
|
|
|
def getClientPath(self): |
|
1837
|
|
|
return "/".join(self.aq_parent.getPhysicalPath()) |
|
1838
|
|
|
|
|
1839
|
|
|
def getProfilesTitle(self): |
|
1840
|
|
|
return [profile.Title() for profile in self.getProfiles()] |
|
1841
|
|
|
|
|
1842
|
|
|
def setPublicationSpecification(self, value): |
|
1843
|
|
|
"""Never contains a value; this field is here for the UI." \ |
|
1844
|
|
|
""" |
|
1845
|
|
|
return value |
|
1846
|
|
|
|
|
1847
|
|
|
def getAnalysisService(self): |
|
1848
|
|
|
proxies = self.getAnalyses(full_objects=False) |
|
1849
|
|
|
value = set() |
|
1850
|
|
|
for proxy in proxies: |
|
1851
|
|
|
value.add(proxy.Title) |
|
1852
|
|
|
return list(value) |
|
1853
|
|
|
|
|
1854
|
|
|
def getAnalysts(self): |
|
1855
|
|
|
proxies = self.getAnalyses(full_objects=True) |
|
1856
|
|
|
value = [] |
|
1857
|
|
|
for proxy in proxies: |
|
1858
|
|
|
val = proxy.getAnalyst() |
|
1859
|
|
|
if val not in value: |
|
1860
|
|
|
value.append(val) |
|
1861
|
|
|
return value |
|
1862
|
|
|
|
|
1863
|
|
|
def getDistrict(self): |
|
1864
|
|
|
client = self.aq_parent |
|
1865
|
|
|
return client.getDistrict() |
|
1866
|
|
|
|
|
1867
|
|
|
def getProvince(self): |
|
1868
|
|
|
client = self.aq_parent |
|
1869
|
|
|
return client.getProvince() |
|
1870
|
|
|
|
|
1871
|
|
|
@security.public |
|
1872
|
|
|
def getBatch(self): |
|
1873
|
|
|
# The parent type may be "Batch" during ar_add. |
|
1874
|
|
|
# This function fills the hidden field in ar_add.pt |
|
1875
|
|
|
if self.aq_parent.portal_type == 'Batch': |
|
1876
|
|
|
return self.aq_parent |
|
1877
|
|
|
else: |
|
1878
|
|
|
return self.Schema()['Batch'].get(self) |
|
1879
|
|
|
|
|
1880
|
|
|
@security.public |
|
1881
|
|
|
def getBatchUID(self): |
|
1882
|
|
|
batch = self.getBatch() |
|
1883
|
|
|
if batch: |
|
1884
|
|
|
return batch.UID() |
|
1885
|
|
|
|
|
1886
|
|
|
@security.public |
|
1887
|
|
|
def setBatch(self, value=None): |
|
1888
|
|
|
original_value = self.Schema().getField('Batch').get(self) |
|
1889
|
|
|
if original_value != value: |
|
1890
|
|
|
self.Schema().getField('Batch').set(self, value) |
|
1891
|
|
|
self._reindexAnalyses(['getBatchUID'], False) |
|
1892
|
|
|
|
|
1893
|
|
|
def getDefaultMemberDiscount(self): |
|
1894
|
|
|
"""Compute default member discount if it applies |
|
1895
|
|
|
""" |
|
1896
|
|
|
if hasattr(self, 'getMemberDiscountApplies'): |
|
1897
|
|
|
if self.getMemberDiscountApplies(): |
|
1898
|
|
|
settings = self.bika_setup |
|
1899
|
|
|
return settings.getMemberDiscount() |
|
1900
|
|
|
else: |
|
1901
|
|
|
return "0.00" |
|
1902
|
|
|
|
|
1903
|
|
|
@security.public |
|
1904
|
|
|
def getAnalysesNum(self): |
|
1905
|
|
|
""" Returns an array with the number of analyses for the current AR in |
|
1906
|
|
|
different statuses, like follows: |
|
1907
|
|
|
[verified, total, not_submitted, to_be_verified] |
|
1908
|
|
|
""" |
|
1909
|
|
|
an_nums = [0, 0, 0, 0] |
|
1910
|
|
|
for analysis in self.getAnalyses(): |
|
1911
|
|
|
review_state = analysis.review_state |
|
1912
|
|
|
if review_state in ['retracted', 'rejected', 'cancelled']: |
|
1913
|
|
|
continue |
|
1914
|
|
|
if review_state == 'to_be_verified': |
|
1915
|
|
|
an_nums[3] += 1 |
|
1916
|
|
|
elif review_state in ['published', 'verified']: |
|
1917
|
|
|
an_nums[0] += 1 |
|
1918
|
|
|
else: |
|
1919
|
|
|
an_nums[2] += 1 |
|
1920
|
|
|
an_nums[1] += 1 |
|
1921
|
|
|
return an_nums |
|
1922
|
|
|
|
|
1923
|
|
|
@security.public |
|
1924
|
|
|
def getResponsible(self): |
|
1925
|
|
|
"""Return all manager info of responsible departments |
|
1926
|
|
|
""" |
|
1927
|
|
|
managers = {} |
|
1928
|
|
|
for department in self.getDepartments(): |
|
1929
|
|
|
manager = department.getManager() |
|
1930
|
|
|
if manager is None: |
|
1931
|
|
|
continue |
|
1932
|
|
|
manager_id = manager.getId() |
|
1933
|
|
|
if manager_id not in managers: |
|
1934
|
|
|
managers[manager_id] = {} |
|
1935
|
|
|
managers[manager_id]['salutation'] = safe_unicode( |
|
1936
|
|
|
manager.getSalutation()) |
|
1937
|
|
|
managers[manager_id]['name'] = safe_unicode( |
|
1938
|
|
|
manager.getFullname()) |
|
1939
|
|
|
managers[manager_id]['email'] = safe_unicode( |
|
1940
|
|
|
manager.getEmailAddress()) |
|
1941
|
|
|
managers[manager_id]['phone'] = safe_unicode( |
|
1942
|
|
|
manager.getBusinessPhone()) |
|
1943
|
|
|
managers[manager_id]['job_title'] = safe_unicode( |
|
1944
|
|
|
manager.getJobTitle()) |
|
1945
|
|
|
if manager.getSignature(): |
|
1946
|
|
|
managers[manager_id]['signature'] = \ |
|
1947
|
|
|
'{}/Signature'.format(manager.absolute_url()) |
|
1948
|
|
|
else: |
|
1949
|
|
|
managers[manager_id]['signature'] = False |
|
1950
|
|
|
managers[manager_id]['departments'] = '' |
|
1951
|
|
|
mngr_dept = managers[manager_id]['departments'] |
|
1952
|
|
|
if mngr_dept: |
|
1953
|
|
|
mngr_dept += ', ' |
|
1954
|
|
|
mngr_dept += safe_unicode(department.Title()) |
|
1955
|
|
|
managers[manager_id]['departments'] = mngr_dept |
|
1956
|
|
|
mngr_keys = managers.keys() |
|
1957
|
|
|
mngr_info = {'ids': mngr_keys, 'dict': managers} |
|
1958
|
|
|
|
|
1959
|
|
|
return mngr_info |
|
1960
|
|
|
|
|
1961
|
|
|
@security.public |
|
1962
|
|
|
def getManagers(self): |
|
1963
|
|
|
"""Return all managers of responsible departments |
|
1964
|
|
|
""" |
|
1965
|
|
|
manager_ids = [] |
|
1966
|
|
|
manager_list = [] |
|
1967
|
|
|
for department in self.getDepartments(): |
|
1968
|
|
|
manager = department.getManager() |
|
1969
|
|
|
if manager is None: |
|
1970
|
|
|
continue |
|
1971
|
|
|
manager_id = manager.getId() |
|
1972
|
|
|
if manager_id not in manager_ids: |
|
1973
|
|
|
manager_ids.append(manager_id) |
|
1974
|
|
|
manager_list.append(manager) |
|
1975
|
|
|
return manager_list |
|
1976
|
|
|
|
|
1977
|
|
|
def getDueDate(self): |
|
1978
|
|
|
"""Returns the earliest due date of the analyses this Analysis Request |
|
1979
|
|
|
contains.""" |
|
1980
|
|
|
due_dates = map(lambda an: an.getDueDate, self.getAnalyses()) |
|
1981
|
|
|
return due_dates and min(due_dates) or None |
|
1982
|
|
|
|
|
1983
|
|
|
security.declareProtected(View, 'getLate') |
|
1984
|
|
|
|
|
1985
|
|
|
def getLate(self): |
|
1986
|
|
|
"""Return True if there is at least one late analysis in this Request |
|
1987
|
|
|
""" |
|
1988
|
|
|
for analysis in self.getAnalyses(): |
|
1989
|
|
|
if analysis.review_state == "retracted": |
|
1990
|
|
|
continue |
|
1991
|
|
|
analysis_obj = api.get_object(analysis) |
|
1992
|
|
|
if analysis_obj.isLateAnalysis(): |
|
1993
|
|
|
return True |
|
1994
|
|
|
return False |
|
1995
|
|
|
|
|
1996
|
|
|
def getPrinted(self): |
|
1997
|
|
|
""" returns "0", "1" or "2" to indicate Printed state. |
|
1998
|
|
|
0 -> Never printed. |
|
1999
|
|
|
1 -> Printed after last publish |
|
2000
|
|
|
2 -> Printed but republished afterwards. |
|
2001
|
|
|
""" |
|
2002
|
|
|
workflow = getToolByName(self, 'portal_workflow') |
|
2003
|
|
|
review_state = workflow.getInfoFor(self, 'review_state', '') |
|
2004
|
|
|
if review_state not in ['published']: |
|
2005
|
|
|
return "0" |
|
2006
|
|
|
report_list = sorted(self.objectValues('ARReport'), |
|
2007
|
|
|
key=lambda report: report.getDatePublished()) |
|
2008
|
|
|
if not report_list: |
|
2009
|
|
|
return "0" |
|
2010
|
|
|
last_report = report_list[-1] |
|
2011
|
|
|
if last_report.getDatePrinted(): |
|
2012
|
|
|
return "1" |
|
2013
|
|
|
else: |
|
2014
|
|
|
for report in report_list: |
|
2015
|
|
|
if report.getDatePrinted(): |
|
2016
|
|
|
return "2" |
|
2017
|
|
|
return "0" |
|
2018
|
|
|
|
|
2019
|
|
|
def printLastReport(self): |
|
2020
|
|
|
"""Setting Printed Time of the last report, so its Printed value will be 1 |
|
2021
|
|
|
""" |
|
2022
|
|
|
workflow = getToolByName(self, 'portal_workflow') |
|
2023
|
|
|
review_state = workflow.getInfoFor(self, 'review_state', '') |
|
2024
|
|
|
if review_state not in ['published']: |
|
2025
|
|
|
return |
|
2026
|
|
|
last_report = sorted(self.objectValues('ARReport'), |
|
2027
|
|
|
key=lambda report: report.getDatePublished())[-1] |
|
2028
|
|
|
if last_report and not last_report.getDatePrinted(): |
|
2029
|
|
|
last_report.setDatePrinted(DateTime()) |
|
2030
|
|
|
self.reindexObject(idxs=['getPrinted']) |
|
2031
|
|
|
|
|
2032
|
|
|
security.declareProtected(View, 'getBillableItems') |
|
2033
|
|
|
|
|
2034
|
|
|
def getBillableItems(self): |
|
2035
|
|
|
"""Returns the items to be billed |
|
2036
|
|
|
""" |
|
2037
|
|
|
def get_keywords_set(profiles): |
|
2038
|
|
|
keys = list() |
|
2039
|
|
|
for profile in profiles: |
|
2040
|
|
|
keys += map(lambda s: s.getKeyword(), profile.getService()) |
|
2041
|
|
|
return set(keys) |
|
2042
|
|
|
|
|
2043
|
|
|
# Profiles with a fixed price, regardless of their analyses |
|
2044
|
|
|
profiles = self.getProfiles() |
|
2045
|
|
|
billable_items = filter(lambda pr: pr.getUseAnalysisProfilePrice(), |
|
2046
|
|
|
profiles) |
|
2047
|
|
|
# Profiles w/o a fixed price. The price is the sum of the individual |
|
2048
|
|
|
# price for each analysis |
|
2049
|
|
|
non_billable = filter(lambda p: p not in billable_items, profiles) |
|
2050
|
|
|
billable_keys = get_keywords_set(non_billable) - \ |
|
2051
|
|
|
get_keywords_set(billable_items) |
|
2052
|
|
|
|
|
2053
|
|
|
# Get the analyses to be billed |
|
2054
|
|
|
exclude_rs = ['retracted', 'rejected'] |
|
2055
|
|
|
for analysis in self.getAnalyses(cancellation_state="active"): |
|
2056
|
|
|
if analysis.review_state in exclude_rs: |
|
2057
|
|
|
continue |
|
2058
|
|
|
if analysis.getKeyword not in billable_keys: |
|
2059
|
|
|
continue |
|
2060
|
|
|
billable_items.append(api.get_object(analysis)) |
|
2061
|
|
|
|
|
2062
|
|
|
# Return the analyses that need to be billed individually, together with |
|
2063
|
|
|
# the profiles with a fixed price |
|
2064
|
|
|
return billable_items |
|
2065
|
|
|
|
|
2066
|
|
|
# TODO Cleanup - Remove this function, only used in invoice and too complex |
|
2067
|
|
|
def getServicesAndProfiles(self): |
|
2068
|
|
|
"""This function gets all analysis services and all profiles and removes |
|
2069
|
|
|
the services belonging to a profile. |
|
2070
|
|
|
|
|
2071
|
|
|
:returns: a tuple of three lists, where the first list contains the |
|
2072
|
|
|
analyses and the second list the profiles. |
|
2073
|
|
|
The third contains the analyses objects used by the profiles. |
|
2074
|
|
|
""" |
|
2075
|
|
|
# profile_analyses contains the profile's analyses (analysis != |
|
2076
|
|
|
# service") objects to obtain |
|
2077
|
|
|
# the correct price later |
|
2078
|
|
|
exclude_rs = ['retracted', 'rejected'] |
|
2079
|
|
|
analyses = filter(lambda an: an.review_state not in exclude_rs, |
|
2080
|
|
|
self.getAnalyses(cancellation_state='active')) |
|
2081
|
|
|
analyses = map(api.get_object, analyses) |
|
2082
|
|
|
profiles = self.getProfiles() |
|
2083
|
|
|
|
|
2084
|
|
|
# Get the service keys from all profiles |
|
2085
|
|
|
profiles_keys = list() |
|
2086
|
|
|
for profile in profiles: |
|
2087
|
|
|
profile_keys = map(lambda s: s.getKeyword(), profile.getService()) |
|
2088
|
|
|
profiles_keys.extend(profile_keys) |
|
2089
|
|
|
|
|
2090
|
|
|
# Extract the analyses which service is present in at least one profile |
|
2091
|
|
|
# and those not present (orphan) |
|
2092
|
|
|
profile_analyses = list() |
|
2093
|
|
|
orphan_analyses = list() |
|
2094
|
|
|
for an in analyses: |
|
2095
|
|
|
if an.getKeyword() in profiles_keys: |
|
2096
|
|
|
profile_analyses.append(an) |
|
2097
|
|
|
else: |
|
2098
|
|
|
orphan_analyses.append(an) |
|
2099
|
|
|
return analyses, profiles, profile_analyses |
|
2100
|
|
|
|
|
2101
|
|
|
security.declareProtected(View, 'getSubtotal') |
|
2102
|
|
|
|
|
2103
|
|
|
def getSubtotal(self): |
|
2104
|
|
|
"""Compute Subtotal (without member discount and without vat) |
|
2105
|
|
|
""" |
|
2106
|
|
|
return sum([Decimal(obj.getPrice()) for obj in self.getBillableItems()]) |
|
2107
|
|
|
|
|
2108
|
|
|
security.declareProtected(View, 'getSubtotalVATAmount') |
|
2109
|
|
|
|
|
2110
|
|
|
def getSubtotalVATAmount(self): |
|
2111
|
|
|
"""Compute VAT amount without member discount |
|
2112
|
|
|
""" |
|
2113
|
|
|
return sum([Decimal(o.getVATAmount()) for o in self.getBillableItems()]) |
|
2114
|
|
|
|
|
2115
|
|
|
security.declareProtected(View, 'getSubtotalTotalPrice') |
|
2116
|
|
|
|
|
2117
|
|
|
def getSubtotalTotalPrice(self): |
|
2118
|
|
|
"""Compute the price with VAT but no member discount |
|
2119
|
|
|
""" |
|
2120
|
|
|
return self.getSubtotal() + self.getSubtotalVATAmount() |
|
2121
|
|
|
|
|
2122
|
|
|
security.declareProtected(View, 'getDiscountAmount') |
|
2123
|
|
|
|
|
2124
|
|
|
def getDiscountAmount(self): |
|
2125
|
|
|
"""It computes and returns the analysis service's discount amount |
|
2126
|
|
|
without VAT |
|
2127
|
|
|
""" |
|
2128
|
|
|
has_client_discount = self.aq_parent.getMemberDiscountApplies() |
|
2129
|
|
|
if has_client_discount: |
|
2130
|
|
|
discount = Decimal(self.getDefaultMemberDiscount()) |
|
2131
|
|
|
return Decimal(self.getSubtotal() * discount / 100) |
|
2132
|
|
|
else: |
|
2133
|
|
|
return 0 |
|
2134
|
|
|
|
|
2135
|
|
|
def getVATAmount(self): |
|
2136
|
|
|
"""It computes the VAT amount from (subtotal-discount.)*VAT/100, but |
|
2137
|
|
|
each analysis has its own VAT! |
|
2138
|
|
|
|
|
2139
|
|
|
:returns: the analysis request VAT amount with the discount |
|
2140
|
|
|
""" |
|
2141
|
|
|
has_client_discount = self.aq_parent.getMemberDiscountApplies() |
|
2142
|
|
|
VATAmount = self.getSubtotalVATAmount() |
|
2143
|
|
|
if has_client_discount: |
|
2144
|
|
|
discount = Decimal(self.getDefaultMemberDiscount()) |
|
2145
|
|
|
return Decimal((1 - discount / 100) * VATAmount) |
|
2146
|
|
|
else: |
|
2147
|
|
|
return VATAmount |
|
2148
|
|
|
|
|
2149
|
|
|
security.declareProtected(View, 'getTotalPrice') |
|
2150
|
|
|
|
|
2151
|
|
|
def getTotalPrice(self): |
|
2152
|
|
|
"""It gets the discounted price from analyses and profiles to obtain the |
|
2153
|
|
|
total value with the VAT and the discount applied |
|
2154
|
|
|
|
|
2155
|
|
|
:returns: analysis request's total price including VATs and discounts |
|
2156
|
|
|
""" |
|
2157
|
|
|
price = (self.getSubtotal() - self.getDiscountAmount() + |
|
2158
|
|
|
self.getVATAmount()) |
|
2159
|
|
|
return price |
|
2160
|
|
|
|
|
2161
|
|
|
getTotal = getTotalPrice |
|
2162
|
|
|
|
|
2163
|
|
|
security.declareProtected(ManageInvoices, 'issueInvoice') |
|
2164
|
|
|
|
|
2165
|
|
|
# noinspection PyUnusedLocal |
|
2166
|
|
|
def issueInvoice(self, REQUEST=None, RESPONSE=None): |
|
2167
|
|
|
"""Issue invoice |
|
2168
|
|
|
""" |
|
2169
|
|
|
# check for an adhoc invoice batch for this month |
|
2170
|
|
|
# noinspection PyCallingNonCallable |
|
2171
|
|
|
now = DateTime() |
|
2172
|
|
|
batch_month = now.strftime('%b %Y') |
|
2173
|
|
|
batch_title = '%s - %s' % (batch_month, 'ad hoc') |
|
2174
|
|
|
invoice_batch = None |
|
2175
|
|
|
for b_proxy in self.portal_catalog(portal_type='InvoiceBatch', |
|
2176
|
|
|
Title=batch_title): |
|
2177
|
|
|
invoice_batch = b_proxy.getObject() |
|
2178
|
|
|
if not invoice_batch: |
|
2179
|
|
|
# noinspection PyCallingNonCallable |
|
2180
|
|
|
first_day = DateTime(now.year(), now.month(), 1) |
|
2181
|
|
|
start_of_month = first_day.earliestTime() |
|
2182
|
|
|
last_day = first_day + 31 |
|
2183
|
|
|
# noinspection PyUnresolvedReferences |
|
2184
|
|
|
while last_day.month() != now.month(): |
|
2185
|
|
|
last_day -= 1 |
|
2186
|
|
|
# noinspection PyUnresolvedReferences |
|
2187
|
|
|
end_of_month = last_day.latestTime() |
|
2188
|
|
|
|
|
2189
|
|
|
invoices = self.invoices |
|
2190
|
|
|
batch_id = invoices.generateUniqueId('InvoiceBatch') |
|
2191
|
|
|
invoice_batch = _createObjectByType("InvoiceBatch", invoices, |
|
2192
|
|
|
batch_id) |
|
2193
|
|
|
invoice_batch.edit( |
|
2194
|
|
|
title=batch_title, |
|
2195
|
|
|
BatchStartDate=start_of_month, |
|
2196
|
|
|
BatchEndDate=end_of_month, |
|
2197
|
|
|
) |
|
2198
|
|
|
invoice_batch.processForm() |
|
2199
|
|
|
|
|
2200
|
|
|
client_uid = self.getClientUID() |
|
2201
|
|
|
# Get the created invoice |
|
2202
|
|
|
invoice = invoice_batch.createInvoice(client_uid, [self, ]) |
|
2203
|
|
|
invoice.setAnalysisRequest(self) |
|
2204
|
|
|
# Set the created invoice in the schema |
|
2205
|
|
|
self.Schema()['Invoice'].set(self, invoice) |
|
2206
|
|
|
|
|
2207
|
|
|
security.declarePublic('printInvoice') |
|
2208
|
|
|
|
|
2209
|
|
|
# noinspection PyUnusedLocal |
|
2210
|
|
|
def printInvoice(self, REQUEST=None, RESPONSE=None): |
|
2211
|
|
|
"""Print invoice |
|
2212
|
|
|
""" |
|
2213
|
|
|
invoice = self.getInvoice() |
|
2214
|
|
|
invoice_url = invoice.absolute_url() |
|
2215
|
|
|
RESPONSE.redirect('{}/invoice_print'.format(invoice_url)) |
|
2216
|
|
|
|
|
2217
|
|
|
@deprecated("addARAttachment will be removed in senaite.core 1.3.0") |
|
2218
|
|
|
def addARAttachment(self, REQUEST=None, RESPONSE=None): |
|
2219
|
|
|
"""Add the file as an attachment |
|
2220
|
|
|
""" |
|
2221
|
|
|
workflow = getToolByName(self, 'portal_workflow') |
|
2222
|
|
|
|
|
2223
|
|
|
this_file = self.REQUEST.form['AttachmentFile_file'] |
|
2224
|
|
|
if 'Analysis' in self.REQUEST.form: |
|
2225
|
|
|
analysis_uid = self.REQUEST.form['Analysis'] |
|
2226
|
|
|
else: |
|
2227
|
|
|
analysis_uid = None |
|
2228
|
|
|
|
|
2229
|
|
|
attachmentid = self.generateUniqueId('Attachment') |
|
2230
|
|
|
attachment = _createObjectByType("Attachment", self.aq_parent, |
|
2231
|
|
|
attachmentid) |
|
2232
|
|
|
attachment.edit( |
|
2233
|
|
|
AttachmentFile=this_file, |
|
2234
|
|
|
AttachmentType=self.REQUEST.form.get('AttachmentType', ''), |
|
2235
|
|
|
AttachmentKeys=self.REQUEST.form['AttachmentKeys']) |
|
2236
|
|
|
attachment.processForm() |
|
2237
|
|
|
attachment.reindexObject() |
|
2238
|
|
|
|
|
2239
|
|
|
if analysis_uid: |
|
2240
|
|
|
tool = getToolByName(self, REFERENCE_CATALOG) |
|
2241
|
|
|
analysis = tool.lookupObject(analysis_uid) |
|
2242
|
|
|
others = analysis.getAttachment() |
|
2243
|
|
|
attachments = [] |
|
2244
|
|
|
for other in others: |
|
2245
|
|
|
attachments.append(other.UID()) |
|
2246
|
|
|
attachments.append(attachment.UID()) |
|
2247
|
|
|
analysis.setAttachment(attachments) |
|
2248
|
|
|
else: |
|
2249
|
|
|
others = self.getAttachment() |
|
2250
|
|
|
attachments = [] |
|
2251
|
|
|
for other in others: |
|
2252
|
|
|
attachments.append(other.UID()) |
|
2253
|
|
|
attachments.append(attachment.UID()) |
|
2254
|
|
|
|
|
2255
|
|
|
self.setAttachment(attachments) |
|
2256
|
|
|
|
|
2257
|
|
|
if REQUEST['HTTP_REFERER'].endswith('manage_results'): |
|
2258
|
|
|
RESPONSE.redirect('{}/manage_results'.format(self.absolute_url())) |
|
2259
|
|
|
else: |
|
2260
|
|
|
RESPONSE.redirect(self.absolute_url()) |
|
2261
|
|
|
|
|
2262
|
|
|
@deprecated("delARAttachment will be removed in senaite.core 1.3.0") |
|
2263
|
|
|
def delARAttachment(self, REQUEST=None, RESPONSE=None): |
|
2264
|
|
|
"""Delete the attachment |
|
2265
|
|
|
""" |
|
2266
|
|
|
tool = getToolByName(self, REFERENCE_CATALOG) |
|
2267
|
|
|
if 'Attachment' in self.REQUEST.form: |
|
2268
|
|
|
attachment_uid = self.REQUEST.form['Attachment'] |
|
2269
|
|
|
attachment = tool.lookupObject(attachment_uid) |
|
2270
|
|
|
parent_r = attachment.getRequest() |
|
2271
|
|
|
parent_a = attachment.getAnalysis() |
|
2272
|
|
|
|
|
2273
|
|
|
parent = parent_a if parent_a else parent_r |
|
2274
|
|
|
others = parent.getAttachment() |
|
2275
|
|
|
attachments = [] |
|
2276
|
|
|
for other in others: |
|
2277
|
|
|
if not other.UID() == attachment_uid: |
|
2278
|
|
|
attachments.append(other.UID()) |
|
2279
|
|
|
parent.setAttachment(attachments) |
|
2280
|
|
|
client = attachment.aq_parent |
|
2281
|
|
|
ids = [attachment.getId(), ] |
|
2282
|
|
|
BaseFolder.manage_delObjects(client, ids, REQUEST) |
|
2283
|
|
|
|
|
2284
|
|
|
RESPONSE.redirect(self.REQUEST.get_header('referer')) |
|
2285
|
|
|
|
|
2286
|
|
|
security.declarePublic('getVerifier') |
|
2287
|
|
|
|
|
2288
|
|
|
@deprecated("Use getVerifiers instead") |
|
2289
|
|
|
def getVerifier(self): |
|
2290
|
|
|
"""Returns the user that verified the whole Analysis Request. Since the |
|
2291
|
|
|
verification is done automatically as soon as all the analyses it |
|
2292
|
|
|
contains are verified, this function returns the user that verified the |
|
2293
|
|
|
last analysis pending. |
|
2294
|
|
|
""" |
|
2295
|
|
|
wtool = getToolByName(self, 'portal_workflow') |
|
2296
|
|
|
mtool = getToolByName(self, 'portal_membership') |
|
2297
|
|
|
|
|
2298
|
|
|
verifier = None |
|
2299
|
|
|
# noinspection PyBroadException |
|
2300
|
|
|
try: |
|
2301
|
|
|
review_history = wtool.getInfoFor(self, 'review_history') |
|
2302
|
|
|
except: # noqa FIXME: remove blind except! |
|
2303
|
|
|
return 'access denied' |
|
2304
|
|
|
|
|
2305
|
|
|
if not review_history: |
|
2306
|
|
|
return 'no history' |
|
2307
|
|
|
for items in review_history: |
|
2308
|
|
|
action = items.get('action') |
|
2309
|
|
|
if action != 'verify': |
|
2310
|
|
|
continue |
|
2311
|
|
|
actor = items.get('actor') |
|
2312
|
|
|
member = mtool.getMemberById(actor) |
|
2313
|
|
|
verifier = member.getProperty('fullname') |
|
2314
|
|
|
if verifier is None or verifier == '': |
|
2315
|
|
|
verifier = actor |
|
2316
|
|
|
return verifier |
|
2317
|
|
|
|
|
2318
|
|
|
@security.public |
|
2319
|
|
|
def getVerifiersIDs(self): |
|
2320
|
|
|
"""Returns the ids from users that have verified at least one analysis |
|
2321
|
|
|
from this Analysis Request |
|
2322
|
|
|
""" |
|
2323
|
|
|
verifiers_ids = list() |
|
2324
|
|
|
for brain in self.getAnalyses(): |
|
2325
|
|
|
verifiers_ids += brain.getVerificators |
|
2326
|
|
|
return list(set(verifiers_ids)) |
|
2327
|
|
|
|
|
2328
|
|
|
@security.public |
|
2329
|
|
|
def getVerifiers(self): |
|
2330
|
|
|
"""Returns the list of lab contacts that have verified at least one |
|
2331
|
|
|
analysis from this Analysis Request |
|
2332
|
|
|
""" |
|
2333
|
|
|
contacts = list() |
|
2334
|
|
|
for verifier in self.getVerifiersIDs(): |
|
2335
|
|
|
user = api.get_user(verifier) |
|
2336
|
|
|
contact = api.get_user_contact(user, ["LabContact"]) |
|
2337
|
|
|
if contact: |
|
2338
|
|
|
contacts.append(contact) |
|
2339
|
|
|
return contacts |
|
2340
|
|
|
|
|
2341
|
|
|
security.declarePublic('getContactUIDForUser') |
|
2342
|
|
|
|
|
2343
|
|
|
def getContactUIDForUser(self): |
|
2344
|
|
|
"""get the UID of the contact associated with the authenticated user |
|
2345
|
|
|
""" |
|
2346
|
|
|
mt = getToolByName(self, 'portal_membership') |
|
2347
|
|
|
user = mt.getAuthenticatedMember() |
|
2348
|
|
|
user_id = user.getUserName() |
|
2349
|
|
|
pc = getToolByName(self, 'portal_catalog') |
|
2350
|
|
|
r = pc(portal_type='Contact', |
|
2351
|
|
|
getUsername=user_id) |
|
2352
|
|
|
if len(r) == 1: |
|
2353
|
|
|
return r[0].UID |
|
2354
|
|
|
|
|
2355
|
|
|
security.declarePublic('current_date') |
|
2356
|
|
|
|
|
2357
|
|
|
def current_date(self): |
|
2358
|
|
|
"""return current date |
|
2359
|
|
|
""" |
|
2360
|
|
|
# noinspection PyCallingNonCallable |
|
2361
|
|
|
return DateTime() |
|
2362
|
|
|
|
|
2363
|
|
|
def getQCAnalyses(self, qctype=None, review_state=None): |
|
2364
|
|
|
"""return the QC analyses performed in the worksheet in which, at |
|
2365
|
|
|
least, one sample of this AR is present. |
|
2366
|
|
|
|
|
2367
|
|
|
Depending on qctype value, returns the analyses of: |
|
2368
|
|
|
|
|
2369
|
|
|
- 'b': all Blank Reference Samples used in related worksheet/s |
|
2370
|
|
|
- 'c': all Control Reference Samples used in related worksheet/s |
|
2371
|
|
|
- 'd': duplicates only for samples contained in this AR |
|
2372
|
|
|
|
|
2373
|
|
|
If qctype==None, returns all type of qc analyses mentioned above |
|
2374
|
|
|
""" |
|
2375
|
|
|
qcanalyses = [] |
|
2376
|
|
|
suids = [] |
|
2377
|
|
|
ans = self.getAnalyses() |
|
2378
|
|
|
wf = getToolByName(self, 'portal_workflow') |
|
2379
|
|
|
for an in ans: |
|
2380
|
|
|
an = an.getObject() |
|
2381
|
|
|
if an.getServiceUID() not in suids: |
|
2382
|
|
|
suids.append(an.getServiceUID()) |
|
2383
|
|
|
|
|
2384
|
|
|
def valid_dup(wan): |
|
2385
|
|
|
if wan.portal_type == 'ReferenceAnalysis': |
|
2386
|
|
|
return False |
|
2387
|
|
|
an_state = wf.getInfoFor(wan, 'review_state') |
|
2388
|
|
|
return \ |
|
2389
|
|
|
wan.portal_type == 'DuplicateAnalysis' \ |
|
2390
|
|
|
and wan.getRequestID() == self.id \ |
|
2391
|
|
|
and (review_state is None or an_state in review_state) |
|
2392
|
|
|
|
|
2393
|
|
|
def valid_ref(wan): |
|
2394
|
|
|
if wan.portal_type != 'ReferenceAnalysis': |
|
2395
|
|
|
return False |
|
2396
|
|
|
an_state = wf.getInfoFor(wan, 'review_state') |
|
2397
|
|
|
an_reftype = wan.getReferenceType() |
|
2398
|
|
|
return wan.getServiceUID() in suids \ |
|
2399
|
|
|
and wan not in qcanalyses \ |
|
2400
|
|
|
and (qctype is None or an_reftype == qctype) \ |
|
2401
|
|
|
and (review_state is None or an_state in review_state) |
|
2402
|
|
|
|
|
2403
|
|
|
for an in ans: |
|
2404
|
|
|
an = an.getObject() |
|
2405
|
|
|
ws = an.getWorksheet() |
|
2406
|
|
|
if not ws: |
|
2407
|
|
|
continue |
|
2408
|
|
|
was = ws.getAnalyses() |
|
2409
|
|
|
for wa in was: |
|
2410
|
|
|
if valid_dup(wa): |
|
2411
|
|
|
qcanalyses.append(wa) |
|
2412
|
|
|
elif valid_ref(wa): |
|
2413
|
|
|
qcanalyses.append(wa) |
|
2414
|
|
|
|
|
2415
|
|
|
return qcanalyses |
|
2416
|
|
|
|
|
2417
|
|
|
def isInvalid(self): |
|
2418
|
|
|
"""return if the Analysis Request has been invalidated |
|
2419
|
|
|
""" |
|
2420
|
|
|
workflow = getToolByName(self, 'portal_workflow') |
|
2421
|
|
|
return workflow.getInfoFor(self, 'review_state') == 'invalid' |
|
2422
|
|
|
|
|
2423
|
|
|
def getSamplingRoundUID(self): |
|
2424
|
|
|
"""Obtains the sampling round UID |
|
2425
|
|
|
:returns: UID |
|
2426
|
|
|
""" |
|
2427
|
|
|
sr = self.getSamplingRound() |
|
2428
|
|
|
if sr: |
|
2429
|
|
|
return sr.UID() |
|
2430
|
|
|
else: |
|
2431
|
|
|
return '' |
|
2432
|
|
|
|
|
2433
|
|
|
def getStorageLocationTitle(self): |
|
2434
|
|
|
""" A method for AR listing catalog metadata |
|
2435
|
|
|
:return: Title of Storage Location |
|
2436
|
|
|
""" |
|
2437
|
|
|
sl = self.getStorageLocation() |
|
2438
|
|
|
if sl: |
|
2439
|
|
|
return sl.Title() |
|
2440
|
|
|
return '' |
|
2441
|
|
|
|
|
2442
|
|
|
@security.public |
|
2443
|
|
|
def getResultsRange(self): |
|
2444
|
|
|
"""Returns the valid result ranges for the analyses this Analysis |
|
2445
|
|
|
Request contains. |
|
2446
|
|
|
|
|
2447
|
|
|
By default uses the result ranges defined in the Analysis Specification |
|
2448
|
|
|
set in "Specification" field if any. Values manually set through |
|
2449
|
|
|
`ResultsRange` field for any given analysis keyword have priority over |
|
2450
|
|
|
the result ranges defined in "Specification" field. |
|
2451
|
|
|
|
|
2452
|
|
|
:return: A list of dictionaries, where each dictionary defines the |
|
2453
|
|
|
result range to use for any analysis contained in this Analysis |
|
2454
|
|
|
Request for the keyword specified. Each dictionary has, at least, |
|
2455
|
|
|
the following keys: "keyword", "min", "max" |
|
2456
|
|
|
:rtype: dict |
|
2457
|
|
|
""" |
|
2458
|
|
|
specs_range = [] |
|
2459
|
|
|
specification = self.getSpecification() |
|
2460
|
|
|
if specification: |
|
2461
|
|
|
specs_range = specification.getResultsRange() |
|
2462
|
|
|
specs_range = specs_range and specs_range or [] |
|
2463
|
|
|
|
|
2464
|
|
|
# Override with AR's custom ranges |
|
2465
|
|
|
ar_range = self.Schema().getField("ResultsRange").get(self) |
|
2466
|
|
|
if not ar_range: |
|
2467
|
|
|
return specs_range |
|
2468
|
|
|
|
|
2469
|
|
|
# Remove those analysis ranges that neither min nor max are floatable |
|
2470
|
|
|
an_specs = [an for an in ar_range if |
|
2471
|
|
|
api.is_floatable(an.get('min', None)) or |
|
2472
|
|
|
api.is_floatable(an.get('max', None))] |
|
2473
|
|
|
# Want to know which are the analyses that needs to be overriden |
|
2474
|
|
|
keywords = map(lambda item: item.get('keyword'), an_specs) |
|
2475
|
|
|
# Get rid of those analyses to be overriden |
|
2476
|
|
|
out_specs = [sp for sp in specs_range if sp['keyword'] not in keywords] |
|
2477
|
|
|
# Add manually set ranges |
|
2478
|
|
|
out_specs.extend(an_specs) |
|
2479
|
|
|
return map(lambda spec: ResultsRangeDict(spec), out_specs) |
|
2480
|
|
|
|
|
2481
|
|
|
def getDatePublished(self): |
|
2482
|
|
|
""" |
|
2483
|
|
|
Returns the transition date from the Analysis Request object |
|
2484
|
|
|
""" |
|
2485
|
|
|
return getTransitionDate(self, 'publish', return_as_datetime=True) |
|
2486
|
|
|
|
|
2487
|
|
|
security.declarePublic('getSamplingDeviationTitle') |
|
2488
|
|
|
|
|
2489
|
|
|
def getSamplingDeviationTitle(self): |
|
2490
|
|
|
""" |
|
2491
|
|
|
It works as a metacolumn. |
|
2492
|
|
|
""" |
|
2493
|
|
|
sd = self.getSamplingDeviation() |
|
2494
|
|
|
if sd: |
|
2495
|
|
|
return sd.Title() |
|
2496
|
|
|
return '' |
|
2497
|
|
|
|
|
2498
|
|
|
security.declarePublic('getHazardous') |
|
2499
|
|
|
|
|
2500
|
|
|
def getHazardous(self): |
|
2501
|
|
|
""" |
|
2502
|
|
|
It works as a metacolumn. |
|
2503
|
|
|
""" |
|
2504
|
|
|
sample_type = self.getSampleType() |
|
2505
|
|
|
if sample_type: |
|
2506
|
|
|
return sample_type.getHazardous() |
|
2507
|
|
|
return False |
|
2508
|
|
|
|
|
2509
|
|
|
security.declarePublic('getContactURL') |
|
2510
|
|
|
|
|
2511
|
|
|
def getContactURL(self): |
|
2512
|
|
|
""" |
|
2513
|
|
|
It works as a metacolumn. |
|
2514
|
|
|
""" |
|
2515
|
|
|
contact = self.getContact() |
|
2516
|
|
|
if contact: |
|
2517
|
|
|
return contact.absolute_url_path() |
|
2518
|
|
|
return '' |
|
2519
|
|
|
|
|
2520
|
|
|
security.declarePublic('getSamplingWorkflowEnabled') |
|
2521
|
|
|
|
|
2522
|
|
|
def getSamplingWorkflowEnabled(self): |
|
2523
|
|
|
""" |
|
2524
|
|
|
It works as a metacolumn. |
|
2525
|
|
|
""" |
|
2526
|
|
|
sample = self.getSample() |
|
2527
|
|
|
if sample: |
|
2528
|
|
|
return sample.getSamplingWorkflowEnabled() |
|
2529
|
|
|
return '' |
|
2530
|
|
|
|
|
2531
|
|
|
def getSamplers(self): |
|
2532
|
|
|
return getUsers(self, ['Sampler', ]) |
|
2533
|
|
|
|
|
2534
|
|
|
def getDepartments(self): |
|
2535
|
|
|
"""Returns a list of the departments assigned to the Analyses |
|
2536
|
|
|
from this Analysis Request |
|
2537
|
|
|
""" |
|
2538
|
|
|
bsc = getToolByName(self, 'bika_setup_catalog') |
|
2539
|
|
|
dept_uids = [] |
|
2540
|
|
|
for an in self.getAnalyses(): |
|
2541
|
|
|
deptuid = None |
|
2542
|
|
|
if hasattr(an, 'getDepartmentUID'): |
|
2543
|
|
|
deptuid = an.getDepartmentUID |
|
2544
|
|
|
if not deptuid and hasattr(an, 'getObject'): |
|
2545
|
|
|
deptuid = an.getObject().getDepartmentUID() |
|
2546
|
|
|
if deptuid: |
|
2547
|
|
|
dept_uids.append(deptuid) |
|
2548
|
|
|
brains = bsc(portal_type='Department', UID=dept_uids) |
|
2549
|
|
|
depts = [b.getObject() for b in brains] |
|
2550
|
|
|
return list(set(depts)) |
|
2551
|
|
|
|
|
2552
|
|
|
def getDepartmentUIDs(self): |
|
2553
|
|
|
"""Return a list of the UIDs of departments assigned to the Analyses |
|
2554
|
|
|
from this Analysis Request. |
|
2555
|
|
|
""" |
|
2556
|
|
|
return [dept.UID() for dept in self.getDepartments()] |
|
2557
|
|
|
|
|
2558
|
|
|
def getResultsInterpretationByDepartment(self, department=None): |
|
2559
|
|
|
"""Returns the results interpretation for this Analysis Request |
|
2560
|
|
|
and department. If department not set, returns the results |
|
2561
|
|
|
interpretation tagged as 'General'. |
|
2562
|
|
|
|
|
2563
|
|
|
:returns: a dict with the following keys: |
|
2564
|
|
|
{'uid': <department_uid> or 'general', 'richtext': <text/plain>} |
|
2565
|
|
|
""" |
|
2566
|
|
|
uid = department.UID() if department else 'general' |
|
2567
|
|
|
rows = self.Schema()['ResultsInterpretationDepts'].get(self) |
|
2568
|
|
|
row = [row for row in rows if row.get('uid') == uid] |
|
2569
|
|
|
if len(row) > 0: |
|
2570
|
|
|
row = row[0] |
|
2571
|
|
|
elif uid == 'general' \ |
|
2572
|
|
|
and hasattr(self, 'getResultsInterpretation') \ |
|
2573
|
|
|
and self.getResultsInterpretation(): |
|
2574
|
|
|
row = {'uid': uid, 'richtext': self.getResultsInterpretation()} |
|
2575
|
|
|
else: |
|
2576
|
|
|
row = {'uid': uid, 'richtext': ''} |
|
2577
|
|
|
return row |
|
2578
|
|
|
|
|
2579
|
|
|
def getAnalysisServiceSettings(self, uid): |
|
2580
|
|
|
"""Returns a dictionary with the settings for the analysis service that |
|
2581
|
|
|
match with the uid provided. |
|
2582
|
|
|
|
|
2583
|
|
|
If there are no settings for the analysis service and |
|
2584
|
|
|
analysis requests: |
|
2585
|
|
|
|
|
2586
|
|
|
1. looks for settings in AR's ARTemplate. If found, returns the |
|
2587
|
|
|
settings for the AnalysisService set in the Template |
|
2588
|
|
|
2. If no settings found, looks in AR's ARProfile. If found, returns the |
|
2589
|
|
|
settings for the AnalysisService from the AR Profile. Otherwise, |
|
2590
|
|
|
returns a one entry dictionary with only the key 'uid' |
|
2591
|
|
|
""" |
|
2592
|
|
|
sets = [s for s in self.getAnalysisServicesSettings() |
|
2593
|
|
|
if s.get('uid', '') == uid] |
|
2594
|
|
|
|
|
2595
|
|
|
# Created by using an ARTemplate? |
|
2596
|
|
|
if not sets and self.getTemplate(): |
|
2597
|
|
|
adv = self.getTemplate().getAnalysisServiceSettings(uid) |
|
2598
|
|
|
sets = [adv] if 'hidden' in adv else [] |
|
2599
|
|
|
|
|
2600
|
|
|
# Created by using an AR Profile? |
|
2601
|
|
|
if not sets and self.getProfiles(): |
|
2602
|
|
|
adv = [] |
|
2603
|
|
|
adv += [profile.getAnalysisServiceSettings(uid) for profile in |
|
2604
|
|
|
self.getProfiles()] |
|
2605
|
|
|
sets = adv if 'hidden' in adv[0] else [] |
|
2606
|
|
|
|
|
2607
|
|
|
return sets[0] if sets else {'uid': uid} |
|
2608
|
|
|
|
|
2609
|
|
|
def getPartitions(self): |
|
2610
|
|
|
"""This functions returns the partitions from the analysis request's |
|
2611
|
|
|
analyses. |
|
2612
|
|
|
|
|
2613
|
|
|
:returns: a list with the full partition objects |
|
2614
|
|
|
""" |
|
2615
|
|
|
partitions = [] |
|
2616
|
|
|
for analysis in self.getAnalyses(full_objects=True): |
|
2617
|
|
|
if analysis.getSamplePartition() not in partitions: |
|
2618
|
|
|
partitions.append(analysis.getSamplePartition()) |
|
2619
|
|
|
return partitions |
|
2620
|
|
|
|
|
2621
|
|
|
def getContainers(self): |
|
2622
|
|
|
"""This functions returns the containers from the analysis request's |
|
2623
|
|
|
analyses |
|
2624
|
|
|
|
|
2625
|
|
|
:returns: a list with the full partition objects |
|
2626
|
|
|
""" |
|
2627
|
|
|
partitions = self.getPartitions() |
|
2628
|
|
|
containers = [] |
|
2629
|
|
|
for partition in partitions: |
|
2630
|
|
|
if partition.getContainer(): |
|
2631
|
|
|
containers.append(partition.getContainer()) |
|
2632
|
|
|
return containers |
|
2633
|
|
|
|
|
2634
|
|
View Code Duplication |
def isAnalysisServiceHidden(self, uid): |
|
|
|
|
|
|
2635
|
|
|
"""Checks if the analysis service that match with the uid provided must |
|
2636
|
|
|
be hidden in results. If no hidden assignment has been set for the |
|
2637
|
|
|
analysis in this request, returns the visibility set to the analysis |
|
2638
|
|
|
itself. |
|
2639
|
|
|
|
|
2640
|
|
|
Raise a TypeError if the uid is empty or None |
|
2641
|
|
|
|
|
2642
|
|
|
Raise a ValueError if there is no hidden assignment in this request or |
|
2643
|
|
|
no analysis service found for this uid. |
|
2644
|
|
|
""" |
|
2645
|
|
|
if not uid: |
|
2646
|
|
|
raise TypeError('None type or empty uid') |
|
2647
|
|
|
sets = self.getAnalysisServiceSettings(uid) |
|
2648
|
|
|
if 'hidden' not in sets: |
|
2649
|
|
|
uc = getToolByName(self, 'uid_catalog') |
|
2650
|
|
|
serv = uc(UID=uid) |
|
2651
|
|
|
if serv and len(serv) == 1: |
|
2652
|
|
|
return serv[0].getObject().getRawHidden() |
|
2653
|
|
|
else: |
|
2654
|
|
|
raise ValueError('{} is not valid'.format(uid)) |
|
2655
|
|
|
return sets.get('hidden', False) |
|
2656
|
|
|
|
|
2657
|
|
|
def getRejecter(self): |
|
2658
|
|
|
"""If the Analysis Request has been rejected, returns the user who did the |
|
2659
|
|
|
rejection. If it was not rejected or the current user has not enough |
|
2660
|
|
|
privileges to access to this information, returns None. |
|
2661
|
|
|
""" |
|
2662
|
|
|
wtool = getToolByName(self, 'portal_workflow') |
|
2663
|
|
|
mtool = getToolByName(self, 'portal_membership') |
|
2664
|
|
|
# noinspection PyBroadException |
|
2665
|
|
|
try: |
|
2666
|
|
|
review_history = wtool.getInfoFor(self, 'review_history') |
|
2667
|
|
|
except: # noqa FIXME: remove blind except! |
|
2668
|
|
|
return None |
|
2669
|
|
|
for items in review_history: |
|
2670
|
|
|
action = items.get('action') |
|
2671
|
|
|
if action != 'reject': |
|
2672
|
|
|
continue |
|
2673
|
|
|
actor = items.get('actor') |
|
2674
|
|
|
return mtool.getMemberById(actor) |
|
2675
|
|
|
return None |
|
2676
|
|
|
|
|
2677
|
|
|
def getReceivedBy(self): |
|
2678
|
|
|
""" |
|
2679
|
|
|
Returns the User who received the analysis request. |
|
2680
|
|
|
:returns: the user id |
|
2681
|
|
|
""" |
|
2682
|
|
|
user = getTransitionUsers(self, 'receive', last_user=True) |
|
2683
|
|
|
return user[0] if user else '' |
|
2684
|
|
|
|
|
2685
|
|
|
def getDateVerified(self): |
|
2686
|
|
|
""" |
|
2687
|
|
|
Returns the date of verification as a DateTime object. |
|
2688
|
|
|
""" |
|
2689
|
|
|
return getTransitionDate(self, 'verify', return_as_datetime=True) |
|
2690
|
|
|
|
|
2691
|
|
|
@security.public |
|
2692
|
|
|
def getPrioritySortkey(self): |
|
2693
|
|
|
"""Returns the key that will be used to sort the current Analysis |
|
2694
|
|
|
Request based on both its priority and creation date. On ASC sorting, |
|
2695
|
|
|
the oldest item with highest priority will be displayed. |
|
2696
|
|
|
:return: string used for sorting |
|
2697
|
|
|
""" |
|
2698
|
|
|
priority = self.getPriority() |
|
2699
|
|
|
created_date = self.created().ISO8601() |
|
2700
|
|
|
return '%s.%s' % (priority, created_date) |
|
2701
|
|
|
|
|
2702
|
|
|
@security.public |
|
2703
|
|
|
def setPriority(self, value): |
|
2704
|
|
|
if not value: |
|
2705
|
|
|
value = self.Schema().getField('Priority').getDefault(self) |
|
2706
|
|
|
original_value = self.Schema().getField('Priority').get(self) |
|
2707
|
|
|
if original_value != value: |
|
2708
|
|
|
self.Schema().getField('Priority').set(self, value) |
|
2709
|
|
|
self._reindexAnalyses(['getPrioritySortkey'], True) |
|
2710
|
|
|
|
|
2711
|
|
|
@security.private |
|
2712
|
|
|
def _reindexAnalyses(self, idxs=None, update_metadata=False): |
|
2713
|
|
|
if not idxs and not update_metadata: |
|
2714
|
|
|
return |
|
2715
|
|
|
if not idxs: |
|
2716
|
|
|
idxs = [] |
|
2717
|
|
|
analyses = self.getAnalyses() |
|
2718
|
|
|
catalog = getToolByName(self, CATALOG_ANALYSIS_LISTING) |
|
2719
|
|
|
for analysis in analyses: |
|
2720
|
|
|
analysis_obj = analysis.getObject() |
|
2721
|
|
|
catalog.reindexObject(analysis_obj, idxs=idxs, update_metadata=1) |
|
2722
|
|
|
|
|
2723
|
|
|
def _getCreatorFullName(self): |
|
2724
|
|
|
""" |
|
2725
|
|
|
Returns the full name of this analysis request's creator. |
|
2726
|
|
|
""" |
|
2727
|
|
|
return user_fullname(self, self.Creator()) |
|
2728
|
|
|
|
|
2729
|
|
|
def _getCreatorEmail(self): |
|
2730
|
|
|
""" |
|
2731
|
|
|
Returns the email of this analysis request's creator. |
|
2732
|
|
|
""" |
|
2733
|
|
|
return user_email(self, self.Creator()) |
|
2734
|
|
|
|
|
2735
|
|
|
def _getSamplerFullName(self): |
|
2736
|
|
|
""" |
|
2737
|
|
|
Returns the full name's defined sampler. |
|
2738
|
|
|
""" |
|
2739
|
|
|
return user_fullname(self, self.getSampler()) |
|
2740
|
|
|
|
|
2741
|
|
|
def _getSamplerEmail(self): |
|
2742
|
|
|
""" |
|
2743
|
|
|
Returns the email of this analysis request's sampler. |
|
2744
|
|
|
""" |
|
2745
|
|
|
return user_email(self, self.Creator()) |
|
2746
|
|
|
|
|
2747
|
|
View Code Duplication |
def getObjectWorkflowStates(self): |
|
|
|
|
|
|
2748
|
|
|
""" |
|
2749
|
|
|
This method is used as a metacolumn. |
|
2750
|
|
|
Returns a dictionary with the workflow id as key and workflow state as |
|
2751
|
|
|
value. |
|
2752
|
|
|
:returns: {'review_state':'active',...} |
|
2753
|
|
|
""" |
|
2754
|
|
|
workflow = getToolByName(self, 'portal_workflow') |
|
2755
|
|
|
states = {} |
|
2756
|
|
|
for w in workflow.getWorkflowsFor(self): |
|
2757
|
|
|
state = w._getWorkflowStateOf(self).id |
|
2758
|
|
|
states[w.state_var] = state |
|
2759
|
|
|
return states |
|
2760
|
|
|
|
|
2761
|
|
|
@security.public |
|
2762
|
|
|
def guard_to_be_preserved(self): |
|
2763
|
|
|
return guards.to_be_preserved(self) |
|
2764
|
|
|
|
|
2765
|
|
|
@security.public |
|
2766
|
|
|
def guard_unassign_transition(self): |
|
2767
|
|
|
return guards.unassign(self) |
|
2768
|
|
|
|
|
2769
|
|
|
@security.public |
|
2770
|
|
|
def guard_assign_transition(self): |
|
2771
|
|
|
return guards.assign(self) |
|
2772
|
|
|
|
|
2773
|
|
|
@security.public |
|
2774
|
|
|
def guard_receive_transition(self): |
|
2775
|
|
|
return guards.receive(self) |
|
2776
|
|
|
|
|
2777
|
|
|
@security.public |
|
2778
|
|
|
def guard_schedule_sampling_transition(self): |
|
2779
|
|
|
return guards.schedule_sampling(self) |
|
2780
|
|
|
|
|
2781
|
|
|
@security.public |
|
2782
|
|
|
def guard_prepublish_transition(self): |
|
2783
|
|
|
return guards.prepublish(self) |
|
2784
|
|
|
|
|
2785
|
|
|
def SearchableText(self): |
|
2786
|
|
|
""" |
|
2787
|
|
|
Override searchable text logic based on the requirements. |
|
2788
|
|
|
|
|
2789
|
|
|
This method constructs a text blob which contains all full-text |
|
2790
|
|
|
searchable text for this content item. |
|
2791
|
|
|
https://docs.plone.org/develop/plone/searching_and_indexing/indexing.html#full-text-searching |
|
2792
|
|
|
""" |
|
2793
|
|
|
|
|
2794
|
|
|
# Speed up string concatenation ops by using a buffer |
|
2795
|
|
|
entries = [] |
|
2796
|
|
|
|
|
2797
|
|
|
# plain text fields we index from ourself, |
|
2798
|
|
|
# a list of accessor methods of the class |
|
2799
|
|
|
plain_text_fields = ("getId", ) |
|
2800
|
|
|
|
|
2801
|
|
|
def read(acc): |
|
2802
|
|
|
""" |
|
2803
|
|
|
Call a class accessor method to give a value for certain Archetypes |
|
2804
|
|
|
field. |
|
2805
|
|
|
""" |
|
2806
|
|
|
try: |
|
2807
|
|
|
val = acc() |
|
2808
|
|
|
except Exception as e: |
|
2809
|
|
|
message = "Error getting the accessor parameter in " \ |
|
2810
|
|
|
"SearchableText from the Analysis Request Object " \ |
|
2811
|
|
|
"{}: {}".format(self.getId(), e.message) |
|
2812
|
|
|
logger.error(message) |
|
2813
|
|
|
val = "" |
|
2814
|
|
|
|
|
2815
|
|
|
if val is None: |
|
2816
|
|
|
val = "" |
|
2817
|
|
|
|
|
2818
|
|
|
return val |
|
2819
|
|
|
|
|
2820
|
|
|
# Concatenate plain text fields as they are |
|
2821
|
|
|
for f in plain_text_fields: |
|
2822
|
|
|
accessor = getattr(self, f) |
|
2823
|
|
|
value = read(accessor) |
|
2824
|
|
|
entries.append(value) |
|
2825
|
|
|
|
|
2826
|
|
|
# Adding HTML Fields to SearchableText can be uncommented if necessary |
|
2827
|
|
|
# transforms = getToolByName(self, 'portal_transforms') |
|
2828
|
|
|
# |
|
2829
|
|
|
# # Run HTML valued fields through text/plain conversion |
|
2830
|
|
|
# for f in html_fields: |
|
2831
|
|
|
# accessor = getattr(self, f) |
|
2832
|
|
|
# value = read(accessor) |
|
2833
|
|
|
# |
|
2834
|
|
|
# if value != "": |
|
2835
|
|
|
# stream = transforms.convertTo('text/plain', value, |
|
2836
|
|
|
# mimetype='text/html') |
|
2837
|
|
|
# value = stream.getData() |
|
2838
|
|
|
# |
|
2839
|
|
|
# entries.append(value) |
|
2840
|
|
|
|
|
2841
|
|
|
# Plone accessor methods assume utf-8 |
|
2842
|
|
|
def convertToUTF8(text): |
|
2843
|
|
|
if type(text) == unicode: |
|
2844
|
|
|
return text.encode("utf-8") |
|
2845
|
|
|
return text |
|
2846
|
|
|
|
|
2847
|
|
|
entries = [convertToUTF8(entry) for entry in entries] |
|
2848
|
|
|
|
|
2849
|
|
|
# Concatenate all strings to one text blob |
|
2850
|
|
|
return " ".join(entries) |
|
2851
|
|
|
|
|
2852
|
|
|
def getPriorityText(self): |
|
2853
|
|
|
""" |
|
2854
|
|
|
This function looks up the priority text from priorities vocab |
|
2855
|
|
|
:returns: the priority text or '' |
|
2856
|
|
|
""" |
|
2857
|
|
|
if self.getPriority(): |
|
2858
|
|
|
return PRIORITIES.getValue(self.getPriority()) |
|
2859
|
|
|
return '' |
|
2860
|
|
|
|
|
2861
|
|
|
def get_ARAttachment(self): |
|
2862
|
|
|
logger.warn("_ARAttachment is a virtual field used in AR Add. " |
|
2863
|
|
|
"It can not hold an own value!") |
|
2864
|
|
|
return None |
|
2865
|
|
|
|
|
2866
|
|
|
def set_ARAttachment(self, value): |
|
2867
|
|
|
logger.warn("_ARAttachment is a virtual field used in AR Add. " |
|
2868
|
|
|
"It can not hold an own value!") |
|
2869
|
|
|
return None |
|
2870
|
|
|
|
|
2871
|
|
|
def get_retest(self): |
|
2872
|
|
|
"""Returns the Analysis Request automatically generated because of the |
|
2873
|
|
|
retraction of the current analysis request |
|
2874
|
|
|
""" |
|
2875
|
|
|
relationship = "AnalysisRequestRetracted" |
|
2876
|
|
|
retest = self.getBackReferences(relationship=relationship) |
|
2877
|
|
|
if retest and len(retest) > 1: |
|
2878
|
|
|
logger.warn("More than one retest for {0}".format(self.getId())) |
|
2879
|
|
|
return retest and retest[0] or None |
|
2880
|
|
|
|
|
2881
|
|
|
def getAncestors(self, all_ancestors=True): |
|
2882
|
|
|
"""Returns the ancestor(s) of this Analysis Request |
|
2883
|
|
|
param all_ancestors: include all ancestors, not only the parent |
|
2884
|
|
|
""" |
|
2885
|
|
|
parent = self.getParentAnalysisRequest() |
|
2886
|
|
|
if not parent: |
|
2887
|
|
|
return list() |
|
2888
|
|
|
if not all_ancestors: |
|
2889
|
|
|
return [parent] |
|
2890
|
|
|
return [parent] + parent.getAncestors(all_ancestors=True) |
|
2891
|
|
|
|
|
2892
|
|
|
def isRootAncestor(self): |
|
2893
|
|
|
"""Returns True if the AR is the root ancestor |
|
2894
|
|
|
|
|
2895
|
|
|
:returns: True if the AR has no more parents |
|
2896
|
|
|
""" |
|
2897
|
|
|
parent = self.getParentAnalysisRequest() |
|
2898
|
|
|
if parent: |
|
2899
|
|
|
return False |
|
2900
|
|
|
return True |
|
2901
|
|
|
|
|
2902
|
|
|
def getDescendants(self, all_descendants=False): |
|
2903
|
|
|
"""Returns the descendant Analysis Requests |
|
2904
|
|
|
|
|
2905
|
|
|
:param all_descendants: recursively include all descendants |
|
2906
|
|
|
""" |
|
2907
|
|
|
|
|
2908
|
|
|
# N.B. full objects returned here from |
|
2909
|
|
|
# `Products.Archetypes.Referenceable.getBRefs` |
|
2910
|
|
|
# -> don't add this method into Metadata |
|
2911
|
|
|
children = self.getBackReferences( |
|
2912
|
|
|
"AnalysisRequestParentAnalysisRequest") |
|
2913
|
|
|
|
|
2914
|
|
|
descendants = [] |
|
2915
|
|
|
|
|
2916
|
|
|
# recursively include all children |
|
2917
|
|
|
if all_descendants: |
|
2918
|
|
|
for child in children: |
|
2919
|
|
|
descendants.append(child) |
|
2920
|
|
|
descendants += child.getDescendants(all_descendants=True) |
|
2921
|
|
|
else: |
|
2922
|
|
|
descendants = children |
|
2923
|
|
|
|
|
2924
|
|
|
return descendants |
|
2925
|
|
|
|
|
2926
|
|
|
def getDescendantsUIDs(self, all_descendants=False): |
|
2927
|
|
|
"""Returns the UIDs of the descendant Analysis Requests |
|
2928
|
|
|
|
|
2929
|
|
|
This method is used as metadata |
|
2930
|
|
|
""" |
|
2931
|
|
|
descendants = self.getDescendants(all_descendants=all_descendants) |
|
2932
|
|
|
return map(api.get_uid, descendants) |
|
2933
|
|
|
|
|
2934
|
|
|
def isPartition(self): |
|
2935
|
|
|
"""Returns true if this Analysis Request is a partition |
|
2936
|
|
|
""" |
|
2937
|
|
|
return not self.isRootAncestor() |
|
2938
|
|
|
|
|
2939
|
|
|
|
|
2940
|
|
|
registerType(AnalysisRequest, PROJECTNAME) |
|
2941
|
|
|
|
senaite /
senaite.core
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