| 1 |  |  | # -*- coding: utf-8 -*- | 
            
                                                                                                            
                            
            
                                    
            
            
                | 2 |  |  | # | 
            
                                                                                                            
                            
            
                                    
            
            
                | 3 |  |  | # This file is part of SENAITE.CORE | 
            
                                                                                                            
                            
            
                                    
            
            
                | 4 |  |  | # | 
            
                                                                                                            
                            
            
                                    
            
            
                | 5 |  |  | # Copyright 2018 by it's authors. | 
            
                                                                                                            
                            
            
                                    
            
            
                | 6 |  |  | # Some rights reserved. See LICENSE.rst, CONTRIBUTORS.rst. | 
            
                                                                                                            
                            
            
                                    
            
            
                | 7 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 8 |  |  | from bika.lims import api | 
            
                                                                                                            
                            
            
                                    
            
            
                | 9 |  |  | from bika.lims import bikaMessageFactory as _ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 10 |  |  | from bika.lims.browser import BrowserView | 
            
                                                                                                            
                            
            
                                    
            
            
                | 11 |  |  | from bika.lims.browser.worksheet.tools import showRejectionMessage | 
            
                                                                                                            
                            
            
                                    
            
            
                | 12 |  |  | from bika.lims.config import WORKSHEET_LAYOUT_OPTIONS | 
            
                                                                                                            
                            
            
                                    
            
            
                | 13 |  |  | from bika.lims.utils import getUsers | 
            
                                                                                                            
                            
            
                                    
            
            
                | 14 |  |  | from plone.app.layout.globals.interfaces import IViewView | 
            
                                                                                                            
                            
            
                                    
            
            
                | 15 |  |  | from Products.Archetypes.public import DisplayList | 
            
                                                                                                            
                            
            
                                    
            
            
                | 16 |  |  | from Products.CMFCore.utils import getToolByName | 
            
                                                                                                            
                            
            
                                    
            
            
                | 17 |  |  | from Products.CMFPlone.utils import safe_unicode | 
            
                                                                                                            
                            
            
                                    
            
            
                | 18 |  |  | from Products.Five.browser.pagetemplatefile import ViewPageTemplateFile | 
            
                                                                                                            
                            
            
                                    
            
            
                | 19 |  |  | from zope.interface import implements | 
            
                                                                                                            
                            
            
                                    
            
            
                | 20 |  |  | from plone.memoize import view | 
            
                                                                                                            
                            
            
                                    
            
            
                | 21 |  |  | from bika.lims.permissions import EditWorksheet | 
            
                                                                                                            
                            
            
                                    
            
            
                | 22 |  |  | from bika.lims.permissions import ManageWorksheets | 
            
                                                                                                            
                            
            
                                    
            
            
                | 23 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 24 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 25 |  |  | class ManageResultsView(BrowserView): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 26 |  |  |     """Worksheet Manage Results View | 
            
                                                                                                            
                            
            
                                    
            
            
                | 27 |  |  |     """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 28 |  |  |     implements(IViewView) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 29 |  |  |     template = ViewPageTemplateFile("../templates/results.pt") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 30 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 31 |  |  |     def __init__(self, context, request): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 32 |  |  |         super(ManageResultsView, self).__init__(context, request) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 33 |  |  |         self.icon = "{}/{}".format( | 
            
                                                                                                            
                            
            
                                    
            
            
                | 34 |  |  |             self.portal_url, | 
            
                                                                                                            
                            
            
                                    
            
            
                | 35 |  |  |             "/++resource++bika.lims.images/worksheet_big.png" | 
            
                                                                                                            
                            
            
                                    
            
            
                | 36 |  |  |         ) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 37 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 38 |  |  |         self.layout_displaylist = WORKSHEET_LAYOUT_OPTIONS | 
            
                                                                                                            
                            
            
                                    
            
            
                | 39 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 40 |  |  |     def __call__(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 41 |  |  |         # TODO: Refactor Worfklow | 
            
                                                                                                            
                            
            
                                    
            
            
                | 42 |  |  |         if not self.is_edit_allowed(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 43 |  |  |             redirect_url = api.get_url(self.context) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 44 |  |  |             return self.request.response.redirect(redirect_url) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 45 |  |  |         # TODO: Refactor this function call | 
            
                                                                                                            
                            
            
                                    
            
            
                | 46 |  |  |         showRejectionMessage(self.context) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 47 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 48 |  |  |         # Save the results layout | 
            
                                                                                                            
                            
            
                                    
            
            
                | 49 |  |  |         rlayout = self.request.get("resultslayout", "") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 50 |  |  |         if rlayout and rlayout in WORKSHEET_LAYOUT_OPTIONS.keys() \ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 51 |  |  |            and rlayout != self.context.getResultsLayout(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 52 |  |  |             self.context.setResultsLayout(rlayout) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 53 |  |  |             message = _("Changes saved.") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 54 |  |  |             self.context.plone_utils.addPortalMessage(message, "info") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 55 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 56 |  |  |         # Classic/Transposed View Switch | 
            
                                                                                                            
                            
            
                                    
            
            
                | 57 |  |  |         if self.context.getResultsLayout() == "1": | 
            
                                                                                                            
                            
            
                                    
            
            
                | 58 |  |  |             view = "analyses_classic_view" | 
            
                                                                                                            
                            
            
                                    
            
            
                | 59 |  |  |             self.Analyses = api.get_view( | 
            
                                                                                                            
                            
            
                                    
            
            
                | 60 |  |  |                 view, context=self.context, request=self.request) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 61 |  |  |         else: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 62 |  |  |             view = "analyses_transposed_view" | 
            
                                                                                                            
                            
            
                                    
            
            
                | 63 |  |  |             self.Analyses = api.get_view( | 
            
                                                                                                            
                            
            
                                    
            
            
                | 64 |  |  |                 view, context=self.context, request=self.request) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 65 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 66 |  |  |         self.analystname = self.context.getAnalystName() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 67 |  |  |         self.instrumenttitle = self.get_instrument_title() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 68 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 69 |  |  |         # Check if the instruments used are valid | 
            
                                                                                                            
                            
            
                                    
            
            
                | 70 |  |  |         self.checkInstrumentsValidity() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 71 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 72 |  |  |         return self.template() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 73 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 74 |  |  |     def get_analysts(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 75 |  |  |         """Returns Analysts | 
            
                                                                                                            
                            
            
                                    
            
            
                | 76 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 77 |  |  |         roles = ["Manager", "LabManager", "Analyst"] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 78 |  |  |         return getUsers(self.context, roles) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 79 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 80 |  |  |     @view.memoize | 
            
                                                                                                            
                            
            
                                    
            
            
                | 81 |  |  |     def get_instrument_title(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 82 |  |  |         """Return the current instrument title | 
            
                                                                                                            
                            
            
                                    
            
            
                | 83 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 84 |  |  |         instrument = self.context.getInstrument() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 85 |  |  |         if not instrument: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 86 |  |  |             return "" | 
            
                                                                                                            
                            
            
                                    
            
            
                | 87 |  |  |         return api.get_title(instrument) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 88 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 89 |  |  |     @view.memoize | 
            
                                                                                                            
                            
            
                                    
            
            
                | 90 |  |  |     def is_edit_allowed(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 91 |  |  |         """Check if edit is allowed | 
            
                                                                                                            
                            
            
                                    
            
            
                | 92 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 93 |  |  |         checkPermission = self.context.portal_membership.checkPermission | 
            
                                                                                                            
                            
            
                                    
            
            
                | 94 |  |  |         return checkPermission(EditWorksheet, self.context) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 95 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 96 |  |  |     @view.memoize | 
            
                                                                                                            
                            
            
                                    
            
            
                | 97 |  |  |     def is_manage_allowed(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 98 |  |  |         """Check if manage is allowed | 
            
                                                                                                            
                            
            
                                    
            
            
                | 99 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 100 |  |  |         checkPermission = self.context.portal_membership.checkPermission | 
            
                                                                                                            
                            
            
                                    
            
            
                | 101 |  |  |         return checkPermission(ManageWorksheets, self.context) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 102 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 103 |  |  |     @view.memoize | 
            
                                                                                                            
                            
            
                                    
            
            
                | 104 |  |  |     def is_assignment_allowed(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 105 |  |  |         """Check if analyst assignment is allowed | 
            
                                                                                                            
                            
            
                                    
            
            
                | 106 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 107 |  |  |         if not self.is_manage_allowed(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 108 |  |  |             return False | 
            
                                                                                                            
                            
            
                                    
            
            
                | 109 |  |  |         review_state = api.get_workflow_status_of(self.context) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 110 |  |  |         edit_states = ["open", "attachment_due", "to_be_verified"] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 111 |  |  |         return review_state in edit_states | 
            
                                                                                                            
                            
            
                                    
            
            
                | 112 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 113 |  |  |     def getInstruments(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 114 |  |  |         # TODO: Return only the allowed instruments for at least one contained | 
            
                                                                                                            
                            
            
                                    
            
            
                | 115 |  |  |         # analysis | 
            
                                                                                                            
                            
            
                                    
            
            
                | 116 |  |  |         bsc = getToolByName(self, 'bika_setup_catalog') | 
            
                                                                                                            
                            
            
                                    
            
            
                | 117 |  |  |         items = [('', '')] + [(o.UID, o.Title) for o in | 
            
                                                                                                            
                            
            
                                    
            
            
                | 118 |  |  |                               bsc(portal_type='Instrument', | 
            
                                                                                                            
                            
            
                                    
            
            
                | 119 |  |  |                                   inactive_state='active')] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 120 |  |  |         o = self.context.getInstrument() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 121 |  |  |         if o and o.UID() not in [i[0] for i in items]: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 122 |  |  |             items.append((o.UID(), o.Title())) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 123 |  |  |         items.sort(lambda x, y: cmp(x[1].lower(), y[1].lower())) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 124 |  |  |         return DisplayList(list(items)) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 125 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 126 |  |  |     def get_wide_interims(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 127 |  |  |         """Returns a dictionary with the analyses services from the current | 
            
                                                                                                            
                            
            
                                    
            
            
                | 128 |  |  |         worksheet which have at least one interim with 'Wide' attribute set to | 
            
                                                                                                            
                            
            
                                    
            
            
                | 129 |  |  |         true and that have not been yet submitted | 
            
                                                                                                            
                            
            
                                    
            
            
                | 130 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 131 |  |  |         The structure of the returned dictionary is the following: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 132 |  |  |         <Analysis_keyword>: { | 
            
                                                                                                            
                            
            
                                    
            
            
                | 133 |  |  |             'analysis': <Analysis_name>, | 
            
                                                                                                            
                            
            
                                    
            
            
                | 134 |  |  |             'keyword': <Analysis_keyword>, | 
            
                                                                                                            
                            
            
                                    
            
            
                | 135 |  |  |             'interims': { | 
            
                                                                                                            
                            
            
                                    
            
            
                | 136 |  |  |                 <Interim_keyword>: { | 
            
                                                                                                            
                            
            
                                    
            
            
                | 137 |  |  |                     'value': <Interim_default_value>, | 
            
                                                                                                            
                            
            
                                    
            
            
                | 138 |  |  |                     'keyword': <Interim_key>, | 
            
                                                                                                            
                            
            
                                    
            
            
                | 139 |  |  |                     'title': <Interim_title> | 
            
                                                                                                            
                            
            
                                    
            
            
                | 140 |  |  |                 } | 
            
                                                                                                            
                            
            
                                    
            
            
                | 141 |  |  |             } | 
            
                                                                                                            
                            
            
                                    
            
            
                | 142 |  |  |         } | 
            
                                                                                                            
                            
            
                                    
            
            
                | 143 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 144 |  |  |         outdict = {} | 
            
                                                                                                            
                            
            
                                    
            
            
                | 145 |  |  |         allowed_states = ['assigned', 'unassigned'] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 146 |  |  |         for analysis in self._getAnalyses(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 147 |  |  |             # TODO Workflow - Analysis Use a query instead of this | 
            
                                                                                                            
                            
            
                                    
            
            
                | 148 |  |  |             if api.get_workflow_status_of(analysis) not in allowed_states: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 149 |  |  |                 continue | 
            
                                                                                                            
                            
            
                                    
            
            
                | 150 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 151 |  |  |             if analysis.getKeyword() in outdict.keys(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 152 |  |  |                 continue | 
            
                                                                                                            
                            
            
                                    
            
            
                | 153 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 154 |  |  |             calculation = analysis.getCalculation() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 155 |  |  |             if not calculation: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 156 |  |  |                 continue | 
            
                                                                                                            
                            
            
                                    
            
            
                | 157 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 158 |  |  |             andict = { | 
            
                                                                                                            
                            
            
                                    
            
            
                | 159 |  |  |                 "analysis": analysis.Title(), | 
            
                                                                                                            
                            
            
                                    
            
            
                | 160 |  |  |                 "keyword": analysis.getKeyword(), | 
            
                                                                                                            
                            
            
                                    
            
            
                | 161 |  |  |                 "interims": {} | 
            
                                                                                                            
                            
            
                                    
            
            
                | 162 |  |  |             } | 
            
                                                                                                            
                            
            
                                    
            
            
                | 163 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 164 |  |  |             # Analysis Service interim defaults | 
            
                                                                                                            
                            
            
                                    
            
            
                | 165 |  |  |             for field in analysis.getInterimFields(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 166 |  |  |                 if field.get("wide", False): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 167 |  |  |                     andict["interims"][field["keyword"]] = field | 
            
                                                                                                            
                            
            
                                    
            
            
                | 168 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 169 |  |  |             # Interims from calculation | 
            
                                                                                                            
                            
            
                                    
            
            
                | 170 |  |  |             for field in calculation.getInterimFields(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 171 |  |  |                 if field["keyword"] not in andict["interims"].keys() \ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 172 |  |  |                    and field.get("wide", False): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 173 |  |  |                     andict["interims"][field["keyword"]] = field | 
            
                                                                                                            
                            
            
                                    
            
            
                | 174 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 175 |  |  |             if andict["interims"]: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 176 |  |  |                 outdict[analysis.getKeyword()] = andict | 
            
                                                                                                            
                            
            
                                    
            
            
                | 177 |  |  |         return outdict | 
            
                                                                                                            
                            
            
                                    
            
            
                | 178 |  |  |  | 
            
                                                                                                            
                            
            
                                                                    
                                                                                                        
            
            
                | 179 |  | View Code Duplication |     def checkInstrumentsValidity(self): | 
                            
                    |  |  |  | 
                                                                                        
                                                                                     | 
            
                                                                                                            
                            
            
                                    
            
            
                | 180 |  |  |         """Checks the validity of the instruments used in the Analyses If an | 
            
                                                                                                            
                            
            
                                    
            
            
                | 181 |  |  |         analysis with an invalid instrument (out-of-date or with calibration | 
            
                                                                                                            
                            
            
                                    
            
            
                | 182 |  |  |         tests failed) is found, a warn message will be displayed. | 
            
                                                                                                            
                            
            
                                    
            
            
                | 183 |  |  |         """ | 
            
                                                                                                            
                            
            
                                    
            
            
                | 184 |  |  |         invalid = [] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 185 |  |  |         ans = self.context.getAnalyses() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 186 |  |  |         for an in ans: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 187 |  |  |             valid = an.isInstrumentValid() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 188 |  |  |             if not valid: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 189 |  |  |                 instrument = an.getInstrument() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 190 |  |  |                 inv = "%s (%s)" % ( | 
            
                                                                                                            
                            
            
                                    
            
            
                | 191 |  |  |                     safe_unicode(an.Title()), safe_unicode(instrument.Title())) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 192 |  |  |                 if inv not in invalid: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 193 |  |  |                     invalid.append(inv) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 194 |  |  |         if len(invalid) > 0: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 195 |  |  |             message = _("Some analyses use out-of-date or uncalibrated " | 
            
                                                                                                            
                            
            
                                    
            
            
                | 196 |  |  |                         "instruments. Results edition not allowed") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 197 |  |  |             message = "%s: %s" % (message, (", ".join(invalid))) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 198 |  |  |             self.context.plone_utils.addPortalMessage(message, "warning") | 
            
                                                                                                            
                            
            
                                    
            
            
                | 199 |  |  |  |