|
1
|
|
|
# -*- coding: utf-8 -*-
|
|
2
|
|
|
#
|
|
3
|
|
|
# This file is part of SENAITE.CORE.
|
|
4
|
|
|
#
|
|
5
|
|
|
# SENAITE.CORE is free software: you can redistribute it and/or modify it under
|
|
6
|
|
|
# the terms of the GNU General Public License as published by the Free Software
|
|
7
|
|
|
# Foundation, version 2.
|
|
8
|
|
|
#
|
|
9
|
|
|
# This program is distributed in the hope that it will be useful, but WITHOUT
|
|
10
|
|
|
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
|
|
11
|
|
|
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
|
|
12
|
|
|
# details.
|
|
13
|
|
|
#
|
|
14
|
|
|
# You should have received a copy of the GNU General Public License along with
|
|
15
|
|
|
# this program; if not, write to the Free Software Foundation, Inc., 51
|
|
16
|
|
|
# Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
|
17
|
|
|
#
|
|
18
|
|
|
# Copyright 2018-2021 by it's authors.
|
|
19
|
|
|
# Some rights reserved, see README and LICENSE.
|
|
20
|
|
|
|
|
21
|
|
|
|
|
22
|
|
|
import json
|
|
23
|
|
|
import plone.protect
|
|
24
|
|
|
from AccessControl import ClassSecurityInfo
|
|
25
|
|
|
from bika.lims import bikaMessageFactory as _
|
|
26
|
|
|
from bika.lims.browser.fields import UIDReferenceField
|
|
27
|
|
|
from bika.lims.browser.widgets import ReferenceWidget
|
|
28
|
|
|
from bika.lims.catalog.bikasetup_catalog import SETUP_CATALOG
|
|
29
|
|
|
from bika.lims.config import PROJECTNAME
|
|
30
|
|
|
from bika.lims.content.bikaschema import BikaSchema
|
|
31
|
|
|
from bika.lims.interfaces import IContainer
|
|
32
|
|
|
from bika.lims.interfaces import IDeactivable
|
|
33
|
|
|
from magnitude import mg
|
|
34
|
|
|
from operator import itemgetter
|
|
35
|
|
|
from Products.Archetypes.atapi import registerType
|
|
36
|
|
|
from Products.Archetypes.BaseContent import BaseContent
|
|
37
|
|
|
from Products.Archetypes.Field import BooleanField
|
|
38
|
|
|
from Products.Archetypes.Field import StringField
|
|
39
|
|
|
from Products.Archetypes.Schema import Schema
|
|
40
|
|
|
from Products.Archetypes.Widget import BooleanWidget
|
|
41
|
|
|
from Products.Archetypes.Widget import StringWidget
|
|
42
|
|
|
from Products.CMFCore.utils import getToolByName
|
|
43
|
|
|
from senaite.core.p3compat import cmp
|
|
44
|
|
|
from zope.interface import implements
|
|
45
|
|
|
|
|
46
|
|
|
schema = BikaSchema.copy() + Schema((
|
|
47
|
|
|
UIDReferenceField(
|
|
48
|
|
|
"ContainerType",
|
|
49
|
|
|
required=0,
|
|
50
|
|
|
allowed_types=("ContainerType",),
|
|
51
|
|
|
widget=ReferenceWidget(
|
|
52
|
|
|
label=_("Container Type"),
|
|
53
|
|
|
showOn=True,
|
|
54
|
|
|
catalog_name=SETUP_CATALOG,
|
|
55
|
|
|
base_query={
|
|
56
|
|
|
"is_active": True,
|
|
57
|
|
|
"sort_on": "sortable_title",
|
|
58
|
|
|
"sort_order": "ascending"
|
|
59
|
|
|
},
|
|
60
|
|
|
),
|
|
61
|
|
|
),
|
|
62
|
|
|
StringField('Capacity',
|
|
63
|
|
|
required = 1,
|
|
64
|
|
|
default = "0 ml",
|
|
65
|
|
|
widget = StringWidget(
|
|
66
|
|
|
label=_("Capacity"),
|
|
67
|
|
|
description=_("Maximum possible size or volume of samples."),
|
|
68
|
|
|
),
|
|
69
|
|
|
),
|
|
70
|
|
|
BooleanField('PrePreserved',
|
|
71
|
|
|
validators = ('container_prepreservation_validator'),
|
|
72
|
|
|
default = False,
|
|
73
|
|
|
widget = BooleanWidget(
|
|
74
|
|
|
label=_("Pre-preserved"),
|
|
75
|
|
|
description = _(
|
|
76
|
|
|
"Check this box if this container is already preserved."
|
|
77
|
|
|
"Setting this will short-circuit the preservation workflow "
|
|
78
|
|
|
"for sample partitions stored in this container."),
|
|
79
|
|
|
),
|
|
80
|
|
|
),
|
|
81
|
|
|
UIDReferenceField(
|
|
82
|
|
|
"Preservation",
|
|
83
|
|
|
required=0,
|
|
84
|
|
|
allowed_types=("Preservation",),
|
|
85
|
|
|
widget=ReferenceWidget(
|
|
86
|
|
|
label=_("Preservation"),
|
|
87
|
|
|
description=_(
|
|
88
|
|
|
"If this container is pre-preserved, then the preservation "
|
|
89
|
|
|
"method could be selected here."
|
|
90
|
|
|
),
|
|
91
|
|
|
showOn=True,
|
|
92
|
|
|
catalog_name=SETUP_CATALOG,
|
|
93
|
|
|
base_query={
|
|
94
|
|
|
"is_active": True,
|
|
95
|
|
|
"sort_on": "sortable_title",
|
|
96
|
|
|
"sort_order": "ascending"
|
|
97
|
|
|
},
|
|
98
|
|
|
),
|
|
99
|
|
|
),
|
|
100
|
|
|
BooleanField('SecuritySealIntact',
|
|
101
|
|
|
default = True,
|
|
102
|
|
|
widget = BooleanWidget(
|
|
103
|
|
|
label=_("Security Seal Intact Y/N"),
|
|
104
|
|
|
),
|
|
105
|
|
|
),
|
|
106
|
|
|
))
|
|
107
|
|
|
schema['description'].widget.visible = True
|
|
108
|
|
|
schema['description'].schemata = 'default'
|
|
109
|
|
|
|
|
110
|
|
|
|
|
111
|
|
|
class Container(BaseContent):
|
|
112
|
|
|
implements(IContainer, IDeactivable)
|
|
113
|
|
|
security = ClassSecurityInfo()
|
|
114
|
|
|
displayContentsTab = False
|
|
115
|
|
|
schema = schema
|
|
|
|
|
|
|
116
|
|
|
|
|
117
|
|
|
_at_rename_after_creation = True
|
|
118
|
|
|
def _renameAfterCreation(self, check_auto_id=False):
|
|
119
|
|
|
from bika.lims.idserver import renameAfterCreation
|
|
120
|
|
|
renameAfterCreation(self)
|
|
121
|
|
|
|
|
122
|
|
View Code Duplication |
def getJSCapacity(self, **kw):
|
|
|
|
|
|
|
123
|
|
|
"""Try convert the Capacity to 'ml' or 'g' so that JS has an
|
|
124
|
|
|
easier time working with it. If conversion fails, return raw value.
|
|
125
|
|
|
"""
|
|
126
|
|
|
default = self.Schema()['Capacity'].get(self)
|
|
127
|
|
|
try:
|
|
128
|
|
|
mgdefault = default.split(' ', 1)
|
|
129
|
|
|
mgdefault = mg(float(mgdefault[0]), mgdefault[1])
|
|
130
|
|
|
except Exception:
|
|
131
|
|
|
mgdefault = mg(0, 'ml')
|
|
132
|
|
|
try:
|
|
133
|
|
|
return str(mgdefault.ounit('ml'))
|
|
134
|
|
|
except Exception:
|
|
135
|
|
|
pass
|
|
136
|
|
|
try:
|
|
137
|
|
|
return str(mgdefault.ounit('g'))
|
|
138
|
|
|
except Exception:
|
|
139
|
|
|
pass
|
|
140
|
|
|
return str(default)
|
|
141
|
|
|
|
|
142
|
|
|
|
|
143
|
|
|
registerType(Container, PROJECTNAME)
|
|
144
|
|
|
|
|
145
|
|
|
|
|
146
|
|
|
# TODO: Refactor!
|
|
147
|
|
|
# This class is registered as `getcontainers` and used in artemplate to
|
|
148
|
|
|
# populate the combogrid field
|
|
149
|
|
View Code Duplication |
class ajaxGetContainers:
|
|
|
|
|
|
|
150
|
|
|
|
|
151
|
|
|
catalog_name='senaite_catalog_setup'
|
|
152
|
|
|
contentFilter = {'portal_type': 'SampleContainer',
|
|
153
|
|
|
'is_active': True}
|
|
154
|
|
|
|
|
155
|
|
|
def __init__(self, context, request):
|
|
156
|
|
|
self.context = context
|
|
157
|
|
|
self.request = request
|
|
158
|
|
|
|
|
159
|
|
|
def __call__(self):
|
|
160
|
|
|
|
|
161
|
|
|
plone.protect.CheckAuthenticator(self.request)
|
|
162
|
|
|
searchTerm = 'searchTerm' in self.request and self.request[
|
|
163
|
|
|
'searchTerm'].lower() or ''
|
|
164
|
|
|
page = self.request['page']
|
|
165
|
|
|
nr_rows = self.request['rows']
|
|
166
|
|
|
sord = self.request['sord']
|
|
167
|
|
|
sidx = self.request['sidx']
|
|
168
|
|
|
rows = []
|
|
169
|
|
|
|
|
170
|
|
|
# lookup objects from ZODB
|
|
171
|
|
|
catalog = getToolByName(self.context, self.catalog_name)
|
|
172
|
|
|
brains = catalog(self.contentFilter)
|
|
173
|
|
|
brains = searchTerm and \
|
|
174
|
|
|
[p for p in brains if p.Title.lower().find(searchTerm) > -1] \
|
|
175
|
|
|
or brains
|
|
176
|
|
|
|
|
177
|
|
|
rows = [{'UID': p.UID,
|
|
178
|
|
|
'container_uid': p.UID,
|
|
179
|
|
|
'Container': p.Title,
|
|
180
|
|
|
'Description': p.Description}
|
|
181
|
|
|
for p in brains]
|
|
182
|
|
|
|
|
183
|
|
|
rows = sorted(rows, cmp=lambda x, y: cmp(x.lower(
|
|
184
|
|
|
), y.lower()), key=itemgetter(sidx and sidx or 'Container'))
|
|
185
|
|
|
if sord == 'desc':
|
|
186
|
|
|
rows.reverse()
|
|
187
|
|
|
pages = len(rows) / int(nr_rows)
|
|
188
|
|
|
pages += divmod(len(rows), int(nr_rows))[1] and 1 or 0
|
|
189
|
|
|
ret = {'page': page,
|
|
190
|
|
|
'total': pages,
|
|
191
|
|
|
'records': len(rows),
|
|
192
|
|
|
'rows': rows[(int(page) - 1) * int(nr_rows): int(page) * int(nr_rows)]}
|
|
193
|
|
|
return json.dumps(ret)
|
|
194
|
|
|
|