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# -*- coding: utf-8 -*- |
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# |
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# This file is part of SENAITE.CORE. |
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# |
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# SENAITE.CORE is free software: you can redistribute it and/or modify it under |
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# the terms of the GNU General Public License as published by the Free Software |
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# Foundation, version 2. |
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# |
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# This program is distributed in the hope that it will be useful, but WITHOUT |
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# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS |
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# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more |
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# details. |
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# |
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# You should have received a copy of the GNU General Public License along with |
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# this program; if not, write to the Free Software Foundation, Inc., 51 |
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# Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. |
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# |
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# Copyright 2018-2019 by it's authors. |
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# Some rights reserved, see README and LICENSE. |
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import collections |
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import datetime |
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import json |
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from calendar import monthrange |
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from operator import itemgetter |
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from time import time |
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from DateTime import DateTime |
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from Products.Archetypes.public import DisplayList |
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from Products.CMFCore.utils import getToolByName |
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from Products.Five.browser.pagetemplatefile import ViewPageTemplateFile |
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from bika.lims import bikaMessageFactory as _ |
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from bika.lims import logger |
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from bika.lims.api import get_tool |
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from bika.lims.api import search |
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from bika.lims.browser import BrowserView |
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from bika.lims.catalog import CATALOG_ANALYSIS_LISTING |
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from bika.lims.catalog import CATALOG_ANALYSIS_REQUEST_LISTING |
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from bika.lims.catalog import CATALOG_WORKSHEET_LISTING |
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from bika.lims.utils import get_strings |
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from bika.lims.utils import get_unicode |
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from plone import api |
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from plone import protect |
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from plone.api.exc import InvalidParameterError |
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from plone.memoize import ram |
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from plone.memoize import view as viewcache |
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DASHBOARD_FILTER_COOKIE = 'dashboard_filter_cookie' |
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# Supported periodicities for evolution charts |
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PERIODICITY_DAILY = "d" |
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PERIODICITY_WEEKLY = "w" |
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PERIODICITY_MONTHLY = "m" |
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PERIODICITY_QUARTERLY = "q" |
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PERIODICITY_BIANNUAL = "b" |
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PERIODICITY_YEARLY = "y" |
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PERIODICITY_ALL = "a" |
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def get_dashboard_registry_record(): |
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""" |
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Return the 'bika.lims.dashboard_panels_visibility' values. |
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:return: A dictionary or None |
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""" |
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try: |
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registry = api.portal.get_registry_record( |
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'bika.lims.dashboard_panels_visibility') |
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return registry |
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except InvalidParameterError: |
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# No entry in the registry for dashboard panels roles. |
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# Maybe upgradestep 1.1.8 was not run? |
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logger.warn("Cannot find a record with name " |
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"'bika.lims.dashboard_panels_visibility' in " |
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"registry_record. Missed upgrade 1.1.8?") |
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return dict() |
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def set_dashboard_registry_record(registry_info): |
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""" |
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Sets the 'bika.lims.dashboard_panels_visibility' values. |
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:param registry_info: A dictionary type object with all its values as |
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*unicode* objects. |
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:return: A dictionary or None |
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""" |
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try: |
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api.portal.set_registry_record( |
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'bika.lims.dashboard_panels_visibility', registry_info) |
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except InvalidParameterError: |
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# No entry in the registry for dashboard panels roles. |
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# Maybe upgradestep 1.1.8 was not run? |
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logger.warn("Cannot find a record with name " |
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"'bika.lims.dashboard_panels_visibility' in " |
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"registry_record. Missed upgrade 1.1.8?") |
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def setup_dashboard_panels_visibility_registry(section_name): |
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""" |
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Initializes the values for panels visibility in registry_records. By |
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default, only users with LabManager or Manager roles can see the panels. |
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:param section_name: |
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:return: An string like: "role1,yes,role2,no,rol3,no" |
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""" |
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registry_info = get_dashboard_registry_record() |
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role_permissions_list = [] |
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# Getting roles defined in the system |
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roles = [] |
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acl_users = get_tool("acl_users") |
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roles_tree = acl_users.portal_role_manager.listRoleIds() |
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for role in roles_tree: |
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roles.append(role) |
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# Set view permissions to each role as 'yes': |
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# "role1,yes,role2,no,rol3,no" |
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for role in roles: |
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role_permissions_list.append(role) |
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visible = 'no' |
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if role in ['LabManager', 'Manager']: |
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visible = 'yes' |
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role_permissions_list.append(visible) |
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role_permissions = ','.join(role_permissions_list) |
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# Set permissions string into dict |
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registry_info[get_unicode(section_name)] = get_unicode(role_permissions) |
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# Set new values to registry record |
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set_dashboard_registry_record(registry_info) |
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return registry_info |
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def get_dashboard_panels_visibility_by_section(section_name): |
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""" |
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Return a list of pairs as values that represents the role-permission |
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view relation for the panel section passed in. |
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:param section_name: the panels section id. |
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:return: a list of tuples. |
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""" |
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registry_info = get_dashboard_registry_record() |
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if section_name not in registry_info: |
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# Registry hasn't been set, do it at least for this section |
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registry_info = \ |
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setup_dashboard_panels_visibility_registry(section_name) |
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pairs = registry_info.get(section_name) |
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pairs = get_strings(pairs) |
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if pairs is None: |
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# In the registry, but with None value? |
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setup_dashboard_panels_visibility_registry(section_name) |
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return get_dashboard_panels_visibility_by_section(section_name) |
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pairs = pairs.split(',') |
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if len(pairs) == 0 or len(pairs) % 2 != 0: |
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# Non-valid or malformed value |
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setup_dashboard_panels_visibility_registry(section_name) |
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return get_dashboard_panels_visibility_by_section(section_name) |
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result = [ |
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(pairs[i], pairs[i + 1]) for i in range(len(pairs)) if i % 2 == 0] |
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return result |
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def is_panel_visible_for_user(panel, user): |
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""" |
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Checks if the user is allowed to see the panel |
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:param panel: panel ID as string |
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:param user: a MemberData object |
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:return: Boolean |
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""" |
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roles = user.getRoles() |
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visibility = get_dashboard_panels_visibility_by_section(panel) |
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for pair in visibility: |
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if pair[0] in roles and pair[1] == 'yes': |
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return True |
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return False |
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class DashboardView(BrowserView): |
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template = ViewPageTemplateFile("templates/dashboard.pt") |
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def __init__(self, context, request): |
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BrowserView.__init__(self, context, request) |
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self.dashboard_cookie = None |
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self.member = None |
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def __call__(self): |
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frontpage_url = self.portal_url + "/senaite-frontpage" |
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if not self.context.bika_setup.getDashboardByDefault(): |
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# Do not render dashboard, render frontpage instead |
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self.request.response.redirect(frontpage_url) |
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return |
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mtool = getToolByName(self.context, 'portal_membership') |
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if mtool.isAnonymousUser(): |
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# Anonymous user, redirect to frontpage |
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self.request.response.redirect(frontpage_url) |
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return |
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self.member = mtool.getAuthenticatedMember() |
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self.periodicity = self.request.get('p', PERIODICITY_WEEKLY) |
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self.dashboard_cookie = self.check_dashboard_cookie() |
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date_range = self.get_date_range(self.periodicity) |
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self.date_from = date_range[0] |
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self.date_to = date_range[1] |
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return self.template() |
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def check_dashboard_cookie(self): |
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""" |
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Check if the dashboard cookie should exist through bikasetup |
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configuration. |
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If it should exist but doesn't exist yet, the function creates it |
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with all values as default. |
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If it should exist and already exists, it returns the value. |
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Otherwise, the function returns None. |
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:return: a dictionary of strings |
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""" |
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# Getting cookie |
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cookie_raw = self.request.get(DASHBOARD_FILTER_COOKIE, None) |
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# If it doesn't exist, create it with default values |
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if cookie_raw is None: |
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cookie_raw = self._create_raw_data() |
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self.request.response.setCookie( |
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DASHBOARD_FILTER_COOKIE, |
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json.dumps(cookie_raw), |
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quoted=False, |
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path='/') |
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return cookie_raw |
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return get_strings(json.loads(cookie_raw)) |
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def is_filter_selected(self, selection_id, value): |
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""" |
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Compares whether the 'selection_id' parameter value saved in the |
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cookie is the same value as the "value" parameter. |
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:param selection_id: a string as a dashboard_cookie key. |
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:param value: The value to compare against the value from |
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dashboard_cookie key. |
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:return: Boolean. |
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""" |
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selected = self.dashboard_cookie.get(selection_id) |
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return selected == value |
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def is_admin_user(self): |
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""" |
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Checks if the user is the admin or a SiteAdmin user. |
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:return: Boolean |
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""" |
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user = api.user.get_current() |
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roles = user.getRoles() |
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return "LabManager" in roles or "Manager" in roles |
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def _create_raw_data(self): |
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""" |
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Gathers the different sections ids and creates a string as first |
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cookie data. |
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:return: A dictionary like: |
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{'analyses':'all','analysisrequest':'all','worksheets':'all'} |
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""" |
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result = {} |
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for section in self.get_sections(): |
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result[section.get('id')] = 'all' |
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return result |
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def get_date_range(self, periodicity=PERIODICITY_WEEKLY): |
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"""Returns a date range (date from, date to) that suits with the passed |
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in periodicity. |
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:param periodicity: string that represents the periodicity |
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:type periodicity: str |
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:return: A date range |
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:rtype: [(DateTime, DateTime)] |
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""" |
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today = datetime.date.today() |
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if periodicity == PERIODICITY_DAILY: |
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# Daily, load last 30 days |
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date_from = DateTime() - 30 |
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date_to = DateTime() + 1 |
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return date_from, date_to |
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if periodicity == PERIODICITY_MONTHLY: |
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# Monthly, load last 2 years |
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min_year = today.year - 1 if today.month == 12 else today.year - 2 |
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min_month = 1 if today.month == 12 else today.month |
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date_from = DateTime(min_year, min_month, 1) |
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date_to = DateTime(today.year, today.month, |
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monthrange(today.year, today.month)[1], |
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23, 59, 59) |
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return date_from, date_to |
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if periodicity == PERIODICITY_QUARTERLY: |
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# Quarterly, load last 4 years |
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m = (((today.month - 1) / 3) * 3) + 1 |
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min_year = today.year - 4 if today.month == 12 else today.year - 5 |
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date_from = DateTime(min_year, m, 1) |
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date_to = DateTime(today.year, m + 2, |
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monthrange(today.year, m + 2)[1], 23, 59, |
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59) |
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return date_from, date_to |
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if periodicity == PERIODICITY_BIANNUAL: |
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# Biannual, load last 10 years |
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m = (((today.month - 1) / 6) * 6) + 1 |
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min_year = today.year - 10 if today.month == 12 else today.year - 11 |
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date_from = DateTime(min_year, m, 1) |
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date_to = DateTime(today.year, m + 5, |
|
306
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|
|
monthrange(today.year, m + 5)[1], 23, 59, |
|
307
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|
|
59) |
|
308
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|
return date_from, date_to |
|
309
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|
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|
310
|
|
|
if periodicity in [PERIODICITY_YEARLY, PERIODICITY_ALL]: |
|
311
|
|
|
# Yearly or All time, load last 15 years |
|
312
|
|
|
min_year = today.year - 15 if today.month == 12 else today.year - 16 |
|
313
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|
|
date_from = DateTime(min_year, 1, 1) |
|
314
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|
|
date_to = DateTime(today.year, 12, 31, 23, 59, 59) |
|
315
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|
|
return date_from, date_to |
|
316
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|
|
|
|
317
|
|
|
# Default Weekly, load last six months |
|
318
|
|
|
year, weeknum, dow = today.isocalendar() |
|
319
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|
|
min_year = today.year if today.month > 6 else today.year - 1 |
|
320
|
|
|
min_month = today.month - 6 if today.month > 6 \ |
|
321
|
|
|
else (today.month - 6) + 12 |
|
322
|
|
|
date_from = DateTime(min_year, min_month, 1) |
|
323
|
|
|
date_to = DateTime() - dow + 7 |
|
324
|
|
|
return date_from, date_to |
|
325
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|
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|
326
|
|
|
def get_sections(self): |
|
327
|
|
|
""" Returns an array with the sections to be displayed. |
|
328
|
|
|
Every section is a dictionary with the following structure: |
|
329
|
|
|
{'id': <section_identifier>, |
|
330
|
|
|
'title': <section_title>, |
|
331
|
|
|
'panels': <array of panels>} |
|
332
|
|
|
""" |
|
333
|
|
|
sections = [] |
|
334
|
|
|
user = api.user.get_current() |
|
335
|
|
|
if is_panel_visible_for_user('analyses', user): |
|
336
|
|
|
sections.append(self.get_analyses_section()) |
|
337
|
|
|
if is_panel_visible_for_user('analysisrequests', user): |
|
338
|
|
|
sections.append(self.get_analysisrequests_section()) |
|
339
|
|
|
if is_panel_visible_for_user('worksheets', user): |
|
340
|
|
|
sections.append(self.get_worksheets_section()) |
|
341
|
|
|
return sections |
|
342
|
|
|
|
|
343
|
|
|
def get_filter_options(self): |
|
344
|
|
|
""" |
|
345
|
|
|
Returns dasboard filter options. |
|
346
|
|
|
:return: Boolean |
|
347
|
|
|
""" |
|
348
|
|
|
dash_opt = DisplayList(( |
|
349
|
|
|
('all', _('All')), |
|
350
|
|
|
('mine', _('Mine')), |
|
351
|
|
|
)) |
|
352
|
|
|
return dash_opt |
|
353
|
|
|
|
|
354
|
|
|
def _getStatistics(self, name, description, url, catalog, criterias, total): |
|
355
|
|
|
out = {'type': 'simple-panel', |
|
356
|
|
|
'name': name, |
|
357
|
|
|
'class': 'informative', |
|
358
|
|
|
'description': description, |
|
359
|
|
|
'total': total, |
|
360
|
|
|
'link': self.portal_url + '/' + url} |
|
361
|
|
|
|
|
362
|
|
|
results = 0 |
|
363
|
|
|
ratio = 0 |
|
364
|
|
|
if total > 0: |
|
365
|
|
|
results = self.search_count(criterias, catalog.id) |
|
366
|
|
|
results = results if total >= results else total |
|
367
|
|
|
ratio = (float(results)/float(total))*100 if results > 0 else 0 |
|
368
|
|
|
ratio = str("%%.%sf" % 1) % ratio |
|
369
|
|
|
out['legend'] = _('of') + " " + str(total) + ' (' + ratio + '%)' |
|
370
|
|
|
out['number'] = results |
|
371
|
|
|
out['percentage'] = float(ratio) |
|
372
|
|
|
return out |
|
373
|
|
|
|
|
374
|
|
|
def get_analysisrequests_section(self): |
|
375
|
|
|
""" Returns the section dictionary related with Analysis |
|
376
|
|
|
Requests, that contains some informative panels (like |
|
377
|
|
|
ARs to be verified, ARs to be published, etc.) |
|
378
|
|
|
""" |
|
379
|
|
|
out = [] |
|
380
|
|
|
catalog = getToolByName(self.context, CATALOG_ANALYSIS_REQUEST_LISTING) |
|
381
|
|
|
query = {'portal_type': "AnalysisRequest", |
|
382
|
|
|
'is_active': True} |
|
383
|
|
|
|
|
384
|
|
|
# Check if dashboard_cookie contains any values to query |
|
385
|
|
|
# elements by |
|
386
|
|
|
query = self._update_criteria_with_filters(query, 'analysisrequests') |
|
387
|
|
|
|
|
388
|
|
|
# Active Samples (All) |
|
389
|
|
|
total = self.search_count(query, catalog.id) |
|
390
|
|
|
|
|
391
|
|
|
# Sampling workflow enabled? |
|
392
|
|
|
if self.context.bika_setup.getSamplingWorkflowEnabled(): |
|
393
|
|
|
# Samples awaiting to be sampled or scheduled |
|
394
|
|
|
name = _('Samples to be sampled') |
|
395
|
|
|
desc = _("To be sampled") |
|
396
|
|
|
purl = 'samples?samples_review_state=to_be_sampled' |
|
397
|
|
|
query['review_state'] = ['to_be_sampled', ] |
|
398
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
399
|
|
|
|
|
400
|
|
|
# Samples awaiting to be preserved |
|
401
|
|
|
name = _('Samples to be preserved') |
|
402
|
|
|
desc = _("To be preserved") |
|
403
|
|
|
purl = 'samples?samples_review_state=to_be_preserved' |
|
404
|
|
|
query['review_state'] = ['to_be_preserved', ] |
|
405
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
406
|
|
|
|
|
407
|
|
|
# Samples scheduled for Sampling |
|
408
|
|
|
name = _('Samples scheduled for sampling') |
|
409
|
|
|
desc = _("Sampling scheduled") |
|
410
|
|
|
purl = 'samples?samples_review_state=scheduled_sampling' |
|
411
|
|
|
query['review_state'] = ['scheduled_sampling', ] |
|
412
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
413
|
|
|
|
|
414
|
|
|
# Samples awaiting for reception |
|
415
|
|
|
name = _('Samples to be received') |
|
416
|
|
|
desc = _("Reception pending") |
|
417
|
|
|
purl = 'analysisrequests?analysisrequests_review_state=sample_due' |
|
418
|
|
|
query['review_state'] = ['sample_due', ] |
|
419
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
420
|
|
|
|
|
421
|
|
|
# Samples under way |
|
422
|
|
|
name = _('Samples with results pending') |
|
423
|
|
|
desc = _("Results pending") |
|
424
|
|
|
purl = 'analysisrequests?analysisrequests_review_state=sample_received' |
|
425
|
|
|
query['review_state'] = ['attachment_due', |
|
426
|
|
|
'sample_received', ] |
|
427
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
428
|
|
|
|
|
429
|
|
|
# Samples to be verified |
|
430
|
|
|
name = _('Samples to be verified') |
|
431
|
|
|
desc = _("To be verified") |
|
432
|
|
|
purl = 'analysisrequests?analysisrequests_review_state=to_be_verified' |
|
433
|
|
|
query['review_state'] = ['to_be_verified', ] |
|
434
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
435
|
|
|
|
|
436
|
|
|
# Samples verified (to be published) |
|
437
|
|
|
name = _('Samples verified') |
|
438
|
|
|
desc = _("Verified") |
|
439
|
|
|
purl = 'analysisrequests?analysisrequests_review_state=verified' |
|
440
|
|
|
query['review_state'] = ['verified', ] |
|
441
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
442
|
|
|
|
|
443
|
|
|
# Samples published |
|
444
|
|
|
name = _('Samples published') |
|
445
|
|
|
desc = _("Published") |
|
446
|
|
|
purl = 'analysisrequests?analysisrequests_review_state=published' |
|
447
|
|
|
query['review_state'] = ['published', ] |
|
448
|
|
|
out.append(self._getStatistics(name, desc, purl, catalog, query, total)) |
|
449
|
|
|
|
|
450
|
|
|
# Samples to be printed |
|
451
|
|
|
if self.context.bika_setup.getPrintingWorkflowEnabled(): |
|
452
|
|
|
name = _('Samples to be printed') |
|
453
|
|
|
desc = _("To be printed") |
|
454
|
|
|
purl = 'analysisrequests?analysisrequests_getPrinted=0' |
|
455
|
|
|
query['getPrinted'] = '0' |
|
456
|
|
|
query['review_state'] = ['published', ] |
|
457
|
|
|
out.append( |
|
458
|
|
|
self._getStatistics(name, desc, purl, catalog, query, total)) |
|
459
|
|
|
|
|
460
|
|
|
# Chart with the evolution of ARs over a period, grouped by |
|
461
|
|
|
# periodicity |
|
462
|
|
|
outevo = self.fill_dates_evo(catalog, query) |
|
463
|
|
|
out.append({'type': 'bar-chart-panel', |
|
464
|
|
|
'name': _('Evolution of Samples'), |
|
465
|
|
|
'class': 'informative', |
|
466
|
|
|
'description': _('Evolution of Samples'), |
|
467
|
|
|
'data': json.dumps(outevo), |
|
468
|
|
|
'datacolors': json.dumps(self.get_colors_palette())}) |
|
469
|
|
|
|
|
470
|
|
|
return {'id': 'analysisrequests', |
|
471
|
|
|
'title': _('Samples'), |
|
472
|
|
|
'panels': out} |
|
473
|
|
|
|
|
474
|
|
|
def get_worksheets_section(self): |
|
475
|
|
|
""" Returns the section dictionary related with Worksheets, |
|
476
|
|
|
that contains some informative panels (like |
|
477
|
|
|
WS to be verified, WS with results pending, etc.) |
|
478
|
|
|
""" |
|
479
|
|
|
out = [] |
|
480
|
|
|
bc = getToolByName(self.context, CATALOG_WORKSHEET_LISTING) |
|
481
|
|
|
query = {'portal_type': "Worksheet", } |
|
482
|
|
|
|
|
483
|
|
|
# Check if dashboard_cookie contains any values to query |
|
484
|
|
|
# elements by |
|
485
|
|
|
query = self._update_criteria_with_filters(query, 'worksheets') |
|
486
|
|
|
|
|
487
|
|
|
# Active Worksheets (all) |
|
488
|
|
|
total = self.search_count(query, bc.id) |
|
489
|
|
|
|
|
490
|
|
|
# Open worksheets |
|
491
|
|
|
name = _('Results pending') |
|
492
|
|
|
desc = _('Results pending') |
|
493
|
|
|
purl = 'worksheets?list_review_state=open' |
|
494
|
|
|
query['review_state'] = ['open', 'attachment_due'] |
|
495
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
496
|
|
|
|
|
497
|
|
|
# Worksheets to be verified |
|
498
|
|
|
name = _('To be verified') |
|
499
|
|
|
desc = _('To be verified') |
|
500
|
|
|
purl = 'worksheets?list_review_state=to_be_verified' |
|
501
|
|
|
query['review_state'] = ['to_be_verified', ] |
|
502
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
503
|
|
|
|
|
504
|
|
|
# Worksheets verified |
|
505
|
|
|
name = _('Verified') |
|
506
|
|
|
desc = _('Verified') |
|
507
|
|
|
purl = 'worksheets?list_review_state=verified' |
|
508
|
|
|
query['review_state'] = ['verified', ] |
|
509
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
510
|
|
|
|
|
511
|
|
|
# Chart with the evolution of WSs over a period, grouped by |
|
512
|
|
|
# periodicity |
|
513
|
|
|
outevo = self.fill_dates_evo(bc, query) |
|
514
|
|
|
out.append({'type': 'bar-chart-panel', |
|
515
|
|
|
'name': _('Evolution of Worksheets'), |
|
516
|
|
|
'class': 'informative', |
|
517
|
|
|
'description': _('Evolution of Worksheets'), |
|
518
|
|
|
'data': json.dumps(outevo), |
|
519
|
|
|
'datacolors': json.dumps(self.get_colors_palette())}) |
|
520
|
|
|
|
|
521
|
|
|
return {'id': 'worksheets', |
|
522
|
|
|
'title': _('Worksheets'), |
|
523
|
|
|
'panels': out} |
|
524
|
|
|
|
|
525
|
|
|
def get_analyses_section(self): |
|
526
|
|
|
""" Returns the section dictionary related with Analyses, |
|
527
|
|
|
that contains some informative panels (analyses pending |
|
528
|
|
|
analyses assigned, etc.) |
|
529
|
|
|
""" |
|
530
|
|
|
out = [] |
|
531
|
|
|
bc = getToolByName(self.context, CATALOG_ANALYSIS_LISTING) |
|
532
|
|
|
query = {'portal_type': "Analysis", 'is_active': True} |
|
533
|
|
|
|
|
534
|
|
|
# Check if dashboard_cookie contains any values to query elements by |
|
535
|
|
|
query = self._update_criteria_with_filters(query, 'analyses') |
|
536
|
|
|
|
|
537
|
|
|
# Active Analyses (All) |
|
538
|
|
|
total = self.search_count(query, bc.id) |
|
539
|
|
|
|
|
540
|
|
|
# Analyses to be assigned |
|
541
|
|
|
name = _('Assignment pending') |
|
542
|
|
|
desc = _('Assignment pending') |
|
543
|
|
|
purl = '#' |
|
544
|
|
|
query['review_state'] = ['unassigned'] |
|
545
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
546
|
|
|
|
|
547
|
|
|
# Analyses pending |
|
548
|
|
|
name = _('Results pending') |
|
549
|
|
|
desc = _('Results pending') |
|
550
|
|
|
purl = '#' |
|
551
|
|
|
query['review_state'] = ['unassigned', 'assigned', ] |
|
552
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
553
|
|
|
|
|
554
|
|
|
# Analyses to be verified |
|
555
|
|
|
name = _('To be verified') |
|
556
|
|
|
desc = _('To be verified') |
|
557
|
|
|
purl = '#' |
|
558
|
|
|
query['review_state'] = ['to_be_verified', ] |
|
559
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
560
|
|
|
|
|
561
|
|
|
# Analyses verified |
|
562
|
|
|
name = _('Verified') |
|
563
|
|
|
desc = _('Verified') |
|
564
|
|
|
purl = '#' |
|
565
|
|
|
query['review_state'] = ['verified', ] |
|
566
|
|
|
out.append(self._getStatistics(name, desc, purl, bc, query, total)) |
|
567
|
|
|
|
|
568
|
|
|
# Chart with the evolution of Analyses over a period, grouped by |
|
569
|
|
|
# periodicity |
|
570
|
|
|
outevo = self.fill_dates_evo(bc, query) |
|
571
|
|
|
out.append({'type': 'bar-chart-panel', |
|
572
|
|
|
'name': _('Evolution of Analyses'), |
|
573
|
|
|
'class': 'informative', |
|
574
|
|
|
'description': _('Evolution of Analyses'), |
|
575
|
|
|
'data': json.dumps(outevo), |
|
576
|
|
|
'datacolors': json.dumps(self.get_colors_palette())}) |
|
577
|
|
|
return {'id': 'analyses', |
|
578
|
|
|
'title': _('Analyses'), |
|
579
|
|
|
'panels': out} |
|
580
|
|
|
|
|
581
|
|
|
def get_states_map(self, portal_type): |
|
582
|
|
|
if portal_type == 'Analysis': |
|
583
|
|
|
return {'unassigned': _('Assignment pending'), |
|
584
|
|
|
'assigned': _('Results pending'), |
|
585
|
|
|
'to_be_verified': _('To be verified'), |
|
586
|
|
|
'rejected': _('Rejected'), |
|
587
|
|
|
'retracted': _('Retracted'), |
|
588
|
|
|
'verified': _('Verified'), |
|
589
|
|
|
'published': _('Published')} |
|
590
|
|
|
elif portal_type == 'AnalysisRequest': |
|
591
|
|
|
return {'to_be_sampled': _('To be sampled'), |
|
592
|
|
|
'to_be_preserved': _('To be preserved'), |
|
593
|
|
|
'scheduled_sampling': _('Sampling scheduled'), |
|
594
|
|
|
'sample_due': _('Reception pending'), |
|
595
|
|
|
'rejected': _('Rejected'), |
|
596
|
|
|
'invalid': _('Invalid'), |
|
597
|
|
|
'sample_received': _('Results pending'), |
|
598
|
|
|
'assigned': _('Results pending'), |
|
599
|
|
|
'attachment_due': _('Results pending'), |
|
600
|
|
|
'to_be_verified': _('To be verified'), |
|
601
|
|
|
'verified': _('Verified'), |
|
602
|
|
|
'published': _('Published')} |
|
603
|
|
|
elif portal_type == 'Worksheet': |
|
604
|
|
|
return {'open': _('Results pending'), |
|
605
|
|
|
'attachment_due': _('Results pending'), |
|
606
|
|
|
'to_be_verified': _('To be verified'), |
|
607
|
|
|
'verified': _('Verified')} |
|
608
|
|
|
|
|
609
|
|
|
def get_colors_palette(self): |
|
610
|
|
|
return { |
|
611
|
|
|
'to_be_sampled': '#917A4C', |
|
612
|
|
|
_('To be sampled'): '#917A4C', |
|
613
|
|
|
|
|
614
|
|
|
'to_be_preserved': '#C2803E', |
|
615
|
|
|
_('To be preserved'): '#C2803E', |
|
616
|
|
|
|
|
617
|
|
|
'scheduled_sampling': '#F38630', |
|
618
|
|
|
_('Sampling scheduled'): '#F38630', |
|
619
|
|
|
|
|
620
|
|
|
'sample_due': '#FA6900', |
|
621
|
|
|
_('Reception pending'): '#FA6900', |
|
622
|
|
|
|
|
623
|
|
|
'sample_received': '#E0E4CC', |
|
624
|
|
|
_('Assignment pending'): '#E0E4CC', |
|
625
|
|
|
_('Sample received'): '#E0E4CC', |
|
626
|
|
|
|
|
627
|
|
|
'assigned': '#dcdcdc', |
|
628
|
|
|
'attachment_due': '#dcdcdc', |
|
629
|
|
|
'open': '#dcdcdc', |
|
630
|
|
|
_('Results pending'): '#dcdcdc', |
|
631
|
|
|
|
|
632
|
|
|
'rejected': '#FF6B6B', |
|
633
|
|
|
'retracted': '#FF6B6B', |
|
634
|
|
|
_('Rejected'): '#FF6B6B', |
|
635
|
|
|
_('Retracted'): '#FF6B6B', |
|
636
|
|
|
|
|
637
|
|
|
'invalid': '#C44D58', |
|
638
|
|
|
_('Invalid'): '#C44D58', |
|
639
|
|
|
|
|
640
|
|
|
'to_be_verified': '#A7DBD8', |
|
641
|
|
|
_('To be verified'): '#A7DBD8', |
|
642
|
|
|
|
|
643
|
|
|
'verified': '#69D2E7', |
|
644
|
|
|
_('Verified'): '#69D2E7', |
|
645
|
|
|
|
|
646
|
|
|
'published': '#83AF9B', |
|
647
|
|
|
_('Published'): '#83AF9B', |
|
648
|
|
|
} |
|
649
|
|
|
|
|
650
|
|
|
def _getDateStr(self, period, created): |
|
651
|
|
|
if period == PERIODICITY_YEARLY: |
|
652
|
|
|
created = created.year() |
|
653
|
|
|
elif period == PERIODICITY_BIANNUAL: |
|
654
|
|
|
m = (((created.month()-1)/6)*6)+1 |
|
655
|
|
|
created = '%s-%s' % (str(created.year())[2:], str(m).zfill(2)) |
|
656
|
|
|
elif period == PERIODICITY_QUARTERLY: |
|
657
|
|
|
m = (((created.month()-1)/3)*3)+1 |
|
658
|
|
|
created = '%s-%s' % (str(created.year())[2:], str(m).zfill(2)) |
|
659
|
|
|
elif period == PERIODICITY_MONTHLY: |
|
660
|
|
|
created = '%s-%s' % (str(created.year())[2:], str(created.month()).zfill(2)) |
|
661
|
|
|
elif period == PERIODICITY_WEEKLY: |
|
662
|
|
|
d = (((created.day()-1)/7)*7)+1 |
|
663
|
|
|
year, weeknum, dow = created.asdatetime().isocalendar() |
|
664
|
|
|
created = created - dow |
|
665
|
|
|
created = '%s-%s-%s' % (str(created.year())[2:], str(created.month()).zfill(2), str(created.day()).zfill(2)) |
|
666
|
|
|
elif period == PERIODICITY_ALL: |
|
667
|
|
|
# All time, but evolution chart grouped by year |
|
668
|
|
|
created = created.year() |
|
669
|
|
|
else: |
|
670
|
|
|
created = '%s-%s-%s' % (str(created.year())[2:], str(created.month()).zfill(2), str(created.day()).zfill(2)) |
|
671
|
|
|
return created |
|
672
|
|
|
|
|
673
|
|
|
def fill_dates_evo(self, catalog, query): |
|
674
|
|
|
sorted_query = collections.OrderedDict(sorted(query.items())) |
|
675
|
|
|
query_json = json.dumps(sorted_query) |
|
676
|
|
|
return self._fill_dates_evo(query_json, catalog.id, self.periodicity) |
|
677
|
|
|
|
|
678
|
|
|
def _fill_dates_evo_cachekey(method, self, query_json, catalog_name, |
|
679
|
|
|
periodicity): |
|
680
|
|
|
hour = time() // (60 * 60 * 2) |
|
681
|
|
|
return hour, catalog_name, query_json, periodicity |
|
682
|
|
|
|
|
683
|
|
|
@ram.cache(_fill_dates_evo_cachekey) |
|
684
|
|
|
def _fill_dates_evo(self, query_json, catalog_name, periodicity): |
|
685
|
|
|
"""Returns an array of dictionaries, where each dictionary contains the |
|
686
|
|
|
amount of items created at a given date and grouped by review_state, |
|
687
|
|
|
based on the passed in periodicity. |
|
688
|
|
|
|
|
689
|
|
|
This is an expensive function that will not be called more than once |
|
690
|
|
|
every 2 hours (note cache decorator with `time() // (60 * 60 * 2) |
|
691
|
|
|
""" |
|
692
|
|
|
outevoidx = {} |
|
693
|
|
|
outevo = [] |
|
694
|
|
|
days = 1 |
|
695
|
|
|
if periodicity == PERIODICITY_YEARLY: |
|
696
|
|
|
days = 336 |
|
697
|
|
|
elif periodicity == PERIODICITY_BIANNUAL: |
|
698
|
|
|
days = 168 |
|
699
|
|
|
elif periodicity == PERIODICITY_QUARTERLY: |
|
700
|
|
|
days = 84 |
|
701
|
|
|
elif periodicity == PERIODICITY_MONTHLY: |
|
702
|
|
|
days = 28 |
|
703
|
|
|
elif periodicity == PERIODICITY_WEEKLY: |
|
704
|
|
|
days = 7 |
|
705
|
|
|
elif periodicity == PERIODICITY_ALL: |
|
706
|
|
|
days = 336 |
|
707
|
|
|
|
|
708
|
|
|
# Get the date range |
|
709
|
|
|
date_from, date_to = self.get_date_range(periodicity) |
|
710
|
|
|
query = json.loads(query_json) |
|
711
|
|
|
if 'review_state' in query: |
|
712
|
|
|
del query['review_state'] |
|
713
|
|
|
query['sort_on'] = 'created' |
|
714
|
|
|
query['created'] = {'query': (date_from, date_to), |
|
715
|
|
|
'range': 'min:max'} |
|
716
|
|
|
|
|
717
|
|
|
otherstate = _('Other status') |
|
718
|
|
|
statesmap = self.get_states_map(query['portal_type']) |
|
719
|
|
|
stats = statesmap.values() |
|
720
|
|
|
stats.sort() |
|
721
|
|
|
stats.append(otherstate) |
|
722
|
|
|
statscount = {s: 0 for s in stats} |
|
723
|
|
|
# Add first all periods, cause we want all segments to be displayed |
|
724
|
|
|
curr = date_from.asdatetime() |
|
725
|
|
|
end = date_to.asdatetime() |
|
726
|
|
|
while curr < end: |
|
727
|
|
|
currstr = self._getDateStr(periodicity, DateTime(curr)) |
|
728
|
|
|
if currstr not in outevoidx: |
|
729
|
|
|
outdict = {'date': currstr} |
|
730
|
|
|
for k in stats: |
|
731
|
|
|
outdict[k] = 0 |
|
732
|
|
|
outevo.append(outdict) |
|
733
|
|
|
outevoidx[currstr] = len(outevo)-1 |
|
734
|
|
|
curr = curr + datetime.timedelta(days=days) |
|
735
|
|
|
|
|
736
|
|
|
brains = search(query, catalog_name) |
|
737
|
|
|
for brain in brains: |
|
738
|
|
|
created = brain.created |
|
739
|
|
|
state = brain.review_state |
|
740
|
|
|
if state not in statesmap: |
|
741
|
|
|
logger.warn("'%s' State for '%s' not available" % (state, query['portal_type'])) |
|
742
|
|
|
state = statesmap[state] if state in statesmap else otherstate |
|
743
|
|
|
created = self._getDateStr(periodicity, created) |
|
744
|
|
|
statscount[state] += 1 |
|
745
|
|
|
if created in outevoidx: |
|
746
|
|
|
oidx = outevoidx[created] |
|
747
|
|
|
if state in outevo[oidx]: |
|
748
|
|
|
outevo[oidx][state] += 1 |
|
749
|
|
|
else: |
|
750
|
|
|
outevo[oidx][state] = 1 |
|
751
|
|
|
else: |
|
752
|
|
|
# Create new row |
|
753
|
|
|
currow = {'date': created, |
|
754
|
|
|
state: 1} |
|
755
|
|
|
outevo.append(currow) |
|
756
|
|
|
|
|
757
|
|
|
# Remove all those states for which there is no data |
|
758
|
|
|
rstates = [k for k, v in statscount.items() if v == 0] |
|
759
|
|
|
for o in outevo: |
|
760
|
|
|
for r in rstates: |
|
761
|
|
|
if r in o: |
|
762
|
|
|
del o[r] |
|
763
|
|
|
|
|
764
|
|
|
# Sort available status by number of occurences descending |
|
765
|
|
|
sorted_states = sorted(statscount.items(), key=itemgetter(1)) |
|
766
|
|
|
sorted_states = map(lambda item: item[0], sorted_states) |
|
767
|
|
|
sorted_states.reverse() |
|
768
|
|
|
return {'data': outevo, 'states': sorted_states} |
|
769
|
|
|
|
|
770
|
|
|
def search_count(self, query, catalog_name): |
|
771
|
|
|
sorted_query = collections.OrderedDict(sorted(query.items())) |
|
772
|
|
|
query_json = json.dumps(sorted_query) |
|
773
|
|
|
return self._search_count(query_json, catalog_name) |
|
774
|
|
|
|
|
775
|
|
|
@viewcache.memoize |
|
776
|
|
|
def _search_count(self, query_json, catalog_name): |
|
777
|
|
|
query = json.loads(query_json) |
|
778
|
|
|
brains = search(query, catalog_name) |
|
779
|
|
|
return len(brains) |
|
780
|
|
|
|
|
781
|
|
|
def _update_criteria_with_filters(self, query, section_name): |
|
782
|
|
|
""" |
|
783
|
|
|
This method updates the 'query' dictionary with the criteria stored in |
|
784
|
|
|
dashboard cookie. |
|
785
|
|
|
|
|
786
|
|
|
:param query: A dictionary with search criteria. |
|
787
|
|
|
:param section_name: The dashboard section name |
|
788
|
|
|
:return: The 'query' dictionary |
|
789
|
|
|
""" |
|
790
|
|
|
if self.dashboard_cookie is None: |
|
791
|
|
|
return query |
|
792
|
|
|
cookie_criteria = self.dashboard_cookie.get(section_name) |
|
793
|
|
|
if cookie_criteria == 'mine': |
|
794
|
|
|
query['Creator'] = self.member.getId() |
|
795
|
|
|
return query |
|
796
|
|
|
|
|
797
|
|
|
def get_dashboard_panels_visibility(self, section_name): |
|
798
|
|
|
""" |
|
799
|
|
|
Return a list of pairs as values that represents the role-permission |
|
800
|
|
|
view relation for the panel section. |
|
801
|
|
|
:param section_name: the panels section id. |
|
802
|
|
|
:return: a list of tuples. |
|
803
|
|
|
""" |
|
804
|
|
|
return get_dashboard_panels_visibility_by_section(section_name) |
|
805
|
|
|
|
|
806
|
|
|
|
|
807
|
|
|
class DashboardViewPermissionUpdate(BrowserView): |
|
808
|
|
|
""" |
|
809
|
|
|
Updates the values in 'bika.lims.dashboard_panels_visibility' registry. |
|
810
|
|
|
""" |
|
811
|
|
|
|
|
812
|
|
|
def __call__(self): |
|
813
|
|
|
protect.CheckAuthenticator(self.request) |
|
814
|
|
|
# Getting values from post |
|
815
|
|
|
section_name = self.request.get('section_name', None) |
|
816
|
|
|
if section_name is None: |
|
817
|
|
|
return None |
|
818
|
|
|
role_id = self.request.get('role_id', None) |
|
819
|
|
|
if role_id is None: |
|
820
|
|
|
return None |
|
821
|
|
|
check_state = self.request.get('check_state', None) |
|
822
|
|
|
if check_state is None: |
|
823
|
|
|
return None |
|
824
|
|
|
elif check_state == 'false': |
|
825
|
|
|
check_state = 'no' |
|
826
|
|
|
else: |
|
827
|
|
|
check_state = 'yes' |
|
828
|
|
|
# Update registry |
|
829
|
|
|
registry_info = get_dashboard_registry_record() |
|
830
|
|
|
pairs = get_dashboard_panels_visibility_by_section(section_name) |
|
831
|
|
|
role_permissions = list() |
|
832
|
|
|
for pair in pairs: |
|
833
|
|
|
visibility = pair[1] |
|
834
|
|
|
if pair[0] == role_id: |
|
835
|
|
|
visibility = check_state |
|
836
|
|
|
value = '{0},{1}'.format(pair[0], visibility) |
|
837
|
|
|
role_permissions.append(value) |
|
838
|
|
|
role_permissions = ','.join(role_permissions) |
|
839
|
|
|
# Set permissions string into dict |
|
840
|
|
|
registry_info[section_name] = get_unicode(role_permissions) |
|
841
|
|
|
set_dashboard_registry_record(registry_info) |
|
842
|
|
|
return True |
|
843
|
|
|
|
senaite /
senaite.core
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