salimkanoun / GaelO

src/index.php

Spacing +1 added lines, -1 removed lines

@@ -20,6 +20,6 @@
  * @author      Salim Kanoun <Salim.Kanoun@gmail.com>

  */

 

-header( 'content-type: text/html; charset=utf-8' );

+header('content-type: text/html; charset=utf-8');

 require_once('vendor/autoload.php');

 require 'router.php';
\ No newline at end of file

src/models/Documentation.php

Spacing +14 added lines, -14 removed lines

@@ -33,9 +33,9 @@ 
     public $deleted;
     
     
-    public function __construct(PDO $linkpdo, int $idDocumentation){
+    public function __construct(PDO $linkpdo, int $idDocumentation) {
     	
-    	$documentationQuery = $linkpdo->prepare("SELECT * FROM documentation WHERE id_documentation = :idDocumentation");
+    	$documentationQuery=$linkpdo->prepare("SELECT * FROM documentation WHERE id_documentation = :idDocumentation");
     	$documentationQuery->execute(array('idDocumentation' => $idDocumentation));
     	$documentation=$documentationQuery->fetch(PDO::FETCH_ASSOC);
     	
@@ -50,7 +50,7 @@ 
         $this->accessReviewer=$documentation['reviewer'];
         $this->deleted=$documentation['deleted'];
         
-        $this->documentFileLocation = ($_SERVER['DOCUMENT_ROOT']."/data/upload/documentation/".$this->study."/".$this->documentName);
+        $this->documentFileLocation=($_SERVER['DOCUMENT_ROOT']."/data/upload/documentation/".$this->study."/".$this->documentName);
     }
     
     /**
@@ -59,12 +59,12 @@ 
      * @return boolean
      */
     
-    public function isDocumentationAllowedForRole(String $role){
-        if($role==User::INVESTIGATOR) return $this->accessInvestigator;
-        else if($role==User::CONTROLLER) return $this->accessController;
-        else if($role==User::MONITOR) return $this->accessMonitor;
-        else if($role==User::REVIEWER) return $this->accessReviewer;
-        else if($role==User::SUPERVISOR) return true;
+    public function isDocumentationAllowedForRole(String $role) {
+        if ($role == User::INVESTIGATOR) return $this->accessInvestigator;
+        else if ($role == User::CONTROLLER) return $this->accessController;
+        else if ($role == User::MONITOR) return $this->accessMonitor;
+        else if ($role == User::REVIEWER) return $this->accessReviewer;
+        else if ($role == User::SUPERVISOR) return true;
         else return false;
     }
     
@@ -78,8 +78,8 @@ 
      * @param bool $reviewer
      * @param bool $deleted
      */
-    public static function updateDocumentation(PDO $linkpdo, int $idDocumentation, bool $investigator, bool $monitor, bool $controller, bool $reviewer, bool $deleted){
-        $update = $linkpdo->prepare('UPDATE documentation
+    public static function updateDocumentation(PDO $linkpdo, int $idDocumentation, bool $investigator, bool $monitor, bool $controller, bool $reviewer, bool $deleted) {
+        $update=$linkpdo->prepare('UPDATE documentation
                                     SET investigator = :investigator,
                                         controller = :controller,
                                         monitor = :monitor,
@@ -92,7 +92,7 @@ 
             'monitor' => intval($monitor),
             'reviewer' =>intval($reviewer),
             'deleted'=>intval($deleted),
-            'id' => $idDocumentation ));
+            'id' => $idDocumentation));
     }
     
     /**
@@ -102,8 +102,8 @@ 
      * @param String $study
      * @param String $version
      */
-    public static function insertDocumentation(PDO $linkpdo, String $uploadedFilename, String $study, String $version){
-        $insertion = $linkpdo->prepare('INSERT INTO documentation (name, document_date, study, version)
+    public static function insertDocumentation(PDO $linkpdo, String $uploadedFilename, String $study, String $version) {
+        $insertion=$linkpdo->prepare('INSERT INTO documentation (name, document_date, study, version)
 																			VALUES (:name, :doc_date, :study, :version)');
         $insertion->execute(array(
             'name' => $uploadedFilename,

src/models/TagAnon.php

Spacing +1 added lines, -1 removed lines

@@ -26,7 +26,7 @@
     public $choice;

     public $newValue;

     

-    public function __construct($tag, $choice, $newValue=null){

+    public function __construct($tag, $choice, $newValue=null) {

         $this->tag=$tag;

         $this->choice=$choice;

         $this->newValue=$newValue;

src/models/Center.php

Spacing +10 added lines, -10 removed lines

@@ -17,7 +17,7 @@ 
  * Center management in the plateform
  */
 
-Class Center{
+Class Center {
 	public $name;
 	public $code;
 	public $countryCode;
@@ -30,13 +30,13 @@ 
 	 * @param $code
 	 * @throws Exception
 	 */
-	public function __construct(PDO $linkpdo, $code){
+	public function __construct(PDO $linkpdo, $code) {
 	    
-	    $centerQuery = $linkpdo->prepare('SELECT * FROM centers WHERE code=:code');
+	    $centerQuery=$linkpdo->prepare('SELECT * FROM centers WHERE code=:code');
 	    $centerQuery->execute(array('code'=>$code));
 	    $center=$centerQuery->fetch(PDO::FETCH_ASSOC);
 	    
-	    if(empty($center)){
+	    if (empty($center)) {
 	        throw new Exception("Non Existing Center");
 	    }
 	    $this->linkpdo=$linkpdo;
@@ -51,8 +51,8 @@ 
 	 * @param string $name
 	 * @param string $countryCode
 	 */
-	public function updateCenter(string $name, string $countryCode){
-	    $updatePatient = $this->linkpdo->prepare("UPDATE centers
+	public function updateCenter(string $name, string $countryCode) {
+	    $updatePatient=$this->linkpdo->prepare("UPDATE centers
                                             SET name = :centerName,
                                             country_code = :countryCode
                                             WHERE code = :code");
@@ -69,7 +69,7 @@ 
 	 * @param $center
 	 * @return User[]
 	 */
-	public static function getUsersAffiliatedToCenter(PDO $linkpdo, $center){
+	public static function getUsersAffiliatedToCenter(PDO $linkpdo, $center) {
 		
 		//Select All users that has a matching center
 		$queryUsersEmail=$linkpdo->prepare('
@@ -87,7 +87,7 @@ 
 		$users=$queryUsersEmail->fetchAll(PDO::FETCH_COLUMN);
 		
 		$usersObjects=[];
-		foreach ($users as $user){
+		foreach ($users as $user) {
 			$usersObjects[]=new User($user, $linkpdo);
 			
 		}
@@ -102,8 +102,8 @@ 
 	 * @param $name
 	 * @param string $countryCode
 	 */
-	public static function addCenter(PDO $linkpdo, $code, String $name, String $countryCode){
-		$insertion = $linkpdo->prepare('INSERT INTO centers (code, name, country_code) VALUES (:code, :name, :countryCode)' );
+	public static function addCenter(PDO $linkpdo, $code, String $name, String $countryCode) {
+		$insertion=$linkpdo->prepare('INSERT INTO centers (code, name, country_code) VALUES (:code, :name, :countryCode)');
 		$insertion->execute(array(
 				'name' => $name,
 				'code' => $code,

src/models/Patient.php

Spacing +30 added lines, -30 removed lines

@@ -17,7 +17,7 @@ 
  * Access Patient data
  */
 
-class Patient{
+class Patient {
     
     public $patient;
     private $linkpdo;
@@ -40,13 +40,13 @@ 
     
     function __construct($patientCode, PDO $linkpdo) {
         $this->patient=$patientCode;
-        $this->linkpdo= $linkpdo;
+        $this->linkpdo=$linkpdo;
         
-        $queryPatientsData = $this->linkpdo->prepare('SELECT * FROM patients WHERE code = :patient');
+        $queryPatientsData=$this->linkpdo->prepare('SELECT * FROM patients WHERE code = :patient');
         $queryPatientsData->execute(array('patient' => $this->patient));
-        $dataPatient = $queryPatientsData->fetch(PDO::FETCH_ASSOC);
+        $dataPatient=$queryPatientsData->fetch(PDO::FETCH_ASSOC);
         
-        if(empty($dataPatient)){
+        if (empty($dataPatient)) {
             throw new Exception("Non Existing Patient");
         }
         
@@ -86,9 +86,9 @@ 
      * @param string $withdrawDate
      * @param string $withdrawReason
      */
-    public function changeWithdrawStatus(bool $withdraw, ?string $withdrawDate, ?string $withdrawReason){
+    public function changeWithdrawStatus(bool $withdraw, ?string $withdrawDate, ?string $withdrawReason) {
         
-        $insertion = $this->linkpdo->prepare('UPDATE patients
+        $insertion=$this->linkpdo->prepare('UPDATE patients
                                             SET withdraw = :withdraw,
                                             withdraw_date = :withdraw_date,
                                             withdraw_reason = :withdraw_reason
@@ -110,8 +110,8 @@ 
      * @param $investigator
      * @param $centerCode
      */
-    public function editPatientDetails($initials, $gender, $birthDate, $registrationDate, $investigator, $centerCode){
-            $insertion = $this->linkpdo->prepare("UPDATE patients
+    public function editPatientDetails($initials, $gender, $birthDate, $registrationDate, $investigator, $centerCode) {
+            $insertion=$this->linkpdo->prepare("UPDATE patients
                                             SET first_name = :firstName,
                                             last_name = :lastName,
                                             gender = :gender,
@@ -144,11 +144,11 @@ 
         //Look if specific patient visit manager exists for this study
         $specificObjectFile=$_SERVER["DOCUMENT_ROOT"].'/data/form/'.$this->patientStudy.'/Poo/'.$this->patientStudy."_Patient_Visit_Manager.php";
             
-        if(is_file($specificObjectFile)){
+        if (is_file($specificObjectFile)) {
             require_once($specificObjectFile);
             $objectName=$this->patientStudy."_Patient_Visit_Manager";
             return new $objectName($this, $visitGroupObject, $this->linkpdo);
-        }else{
+        }else {
             return new Patient_Visit_Manager($this, $visitGroupObject, $this->linkpdo);
         }
 
@@ -166,13 +166,13 @@ 
     /**
      * Return visits created for this patient without group filter
      */
-    public function getAllCreatedPatientsVisits(bool $deletedVisits = false) : Array
+    public function getAllCreatedPatientsVisits(bool $deletedVisits=false) : Array
     {
         $possibleStudyGroups=$this->getAllPossibleVisitGroup();
 
-        $visitsObjectArray = [];
+        $visitsObjectArray=[];
 
-        foreach($possibleStudyGroups as $studyGroup){
+        foreach ($possibleStudyGroups as $studyGroup) {
             $createdVisits=$this->getPatientVisitManager($studyGroup)->getCreatedPatientsVisits($deletedVisits);
             array_push($visitsObjectArray, ...$createdVisits);
         }
@@ -184,13 +184,13 @@ 
      /**
      * Return visits uploaded for this patient without group filter
      */
-    public function getAllQcDonePatientsVisits(bool $deletedVisits = false) : Array
+    public function getAllQcDonePatientsVisits(bool $deletedVisits=false) : Array
     {
         $possibleStudyGroups=$this->getAllPossibleVisitGroup();
 
-        $visitsObjectArray = [];
+        $visitsObjectArray=[];
 
-        foreach($possibleStudyGroups as $studyGroup){
+        foreach ($possibleStudyGroups as $studyGroup) {
             $createdVisits=$this->getPatientVisitManager($studyGroup)->getQcDonePatientsVisits($deletedVisits);
             array_push($visitsObjectArray, ...$createdVisits);
         }
@@ -202,42 +202,42 @@ 
 
         $possiblevisitsGroups=$this->getAllPossibleVisitGroup();
 
-        $visitsObjectArray = [];
+        $visitsObjectArray=[];
 
-        foreach($possiblevisitsGroups as $visitGroup){
-            try{
+        foreach ($possiblevisitsGroups as $visitGroup) {
+            try {
                 $availableVisits=$this->getPatientVisitManager($visitGroup)->getAvailableVisitsToCreate();
-            }catch (Exception $e){
+            }catch (Exception $e) {
                 $availableVisits=array($e->getMessage());
             }
 
-            $visitsObjectArray [$visitGroup->groupModality]['visitsName'] = $availableVisits;
-            $visitsObjectArray [$visitGroup->groupModality]['groupId'] = $visitGroup->groupId;
+            $visitsObjectArray [$visitGroup->groupModality]['visitsName']=$availableVisits;
+            $visitsObjectArray [$visitGroup->groupModality]['groupId']=$visitGroup->groupId;
         }
 
         return $visitsObjectArray;
 
     }
 
-    public function isMissingVisit(){
+    public function isMissingVisit() {
 
         $modalitiesMissingVisits=$this->getMissingVisitModalities();
 
-        $isMissingSomeVisits= ( sizeof($modalitiesMissingVisits) > 0 ) ;
+        $isMissingSomeVisits=(sizeof($modalitiesMissingVisits) > 0);
 
-        return $isMissingSomeVisits ; 
+        return $isMissingSomeVisits; 
 
     }
 
-    public function getMissingVisitModalities(){
+    public function getMissingVisitModalities() {
 
         $possiblevisitsGroups=$this->getAllPossibleVisitGroup();
 
-        $visitsMissingGroupsArray = [];
+        $visitsMissingGroupsArray=[];
 
-        foreach($possiblevisitsGroups as $visitGroup){
+        foreach ($possiblevisitsGroups as $visitGroup) {
             $missingVisit=$this->getPatientVisitManager($visitGroup)->isMissingVisit();
-            if($missingVisit){
+            if ($missingVisit) {
                 $visitsMissingGroupsArray[]=$visitGroup->groupModality;
             }
         }

src/models/Orthanc_Patient.php

Spacing +8 added lines, -8 removed lines

@@ -19,7 +19,7 @@ 
  * This class is not used anymore ...
  */
 
-class Orthanc_Patient{
+class Orthanc_Patient {
 	public $patientName;
 	public $patientID;
 	public $patientSex;
@@ -31,10 +31,10 @@ 
 	private $context;
 	
 	
-	public function __construct($patientOrthancID, $url, $context){
+	public function __construct($patientOrthancID, $url, $context) {
 	    //Set orthanc address
 	    $this->url=$url;
-	    $this->context = $context;
+	    $this->context=$context;
 	    //Set current patient Orthanc ID
 		$this->patientOrthancID=$patientOrthancID;
 	}
@@ -42,9 +42,9 @@ 
 	/** 
 	 * Get and store the main tags of the patient level
 	 */
-	public function retrievePatientData(){
-	    $context  = stream_context_create($this->context);
-	    $json = file_get_contents($this->url.'/patients/'.$this->patientOrthancID, false, $context);
+	public function retrievePatientData() {
+	    $context=stream_context_create($this->context);
+	    $json=file_get_contents($this->url.'/patients/'.$this->patientOrthancID, false, $context);
 		$patientJson=json_decode($json, true);
 		//Add needed informations in this object
 		$this->patientName=$patientJson['MainDicomTags']['PatientName'];
@@ -58,8 +58,8 @@ 
 	/**
 	 * Retrieve data from study level
 	 */
-	public function getStudiesData(){
-		foreach ($this->studiesOrthancID as $studyID){
+	public function getStudiesData() {
+		foreach ($this->studiesOrthancID as $studyID) {
 			//Create a study object of each study
 			$study=new Orthanc_Study($studyID, $this->url, $this->context);
 			//fetch the data of the study level

src/models/Study_Review_Manager.php

Spacing +26 added lines, -26 removed lines

@@ -25,16 +25,16 @@ 
 
 	public function __construct(Study $studyObject)
 	{
-		$this->studyObject = $studyObject;
+		$this->studyObject=$studyObject;
 	}
 
 	private function getAvailableReviewersName(): Array
 	{
 		//List the Reviewers declared in the study
-		$reviewerUsersObjects = $this->studyObject->getUsersByRoleInStudy(User::REVIEWER);
-		$availableReviewers = [];
+		$reviewerUsersObjects=$this->studyObject->getUsersByRoleInStudy(User::REVIEWER);
+		$availableReviewers=[];
 		foreach ($reviewerUsersObjects as $reviewerObject) {
-			$availableReviewers[] = $reviewerObject->lastName . " " . $reviewerObject->firstName;
+			$availableReviewers[]=$reviewerObject->lastName." ".$reviewerObject->firstName;
 		}
 
 		return $availableReviewers;
@@ -48,45 +48,45 @@ 
 	public function getReviewsDetailsByVisit() : Array
 	{
 
-		$availableReviewers = $this->getAvailableReviewersName();
+		$availableReviewers=$this->getAvailableReviewersName();
 		//Retrieve created Visit from the study Object
-		$createdVisitObjects = $this->studyObject->getAllCreatedVisits();
+		$createdVisitObjects=$this->studyObject->getAllCreatedVisits();
 
 		//GlobalMap
-		$reviewdetailsMap = [];
+		$reviewdetailsMap=[];
 
 		foreach ($createdVisitObjects as $createdVisit) {
 			if ($createdVisit->stateQualityControl == Visit::QC_ACCEPTED && $createdVisit->visitTypeObject->reviewNeeded) {
 				//If QC Accepted and review needed we analyze it
-				$newVisit['visitId'] = $createdVisit->id_visit;
-				$newVisit['visitModality'] = $createdVisit->visitGroupObject->groupModality;
-				$newVisit['patientNumber'] = $createdVisit->patientCode;
-				$newVisit['visit'] = $createdVisit->visitType;
-				$newVisit['acquisitionDate'] = $createdVisit->acquisitionDate;
-				$newVisit['reviewStatus'] = $createdVisit->reviewStatus;
+				$newVisit['visitId']=$createdVisit->id_visit;
+				$newVisit['visitModality']=$createdVisit->visitGroupObject->groupModality;
+				$newVisit['patientNumber']=$createdVisit->patientCode;
+				$newVisit['visit']=$createdVisit->visitType;
+				$newVisit['acquisitionDate']=$createdVisit->acquisitionDate;
+				$newVisit['reviewStatus']=$createdVisit->reviewStatus;
 				//Retrieve review
 				try {
-					$reviewObjects = $createdVisit->getReviewsObject(false);
-				} catch (Exception $e) {
-					$reviewObjects = [];
+					$reviewObjects=$createdVisit->getReviewsObject(false);
+				}catch (Exception $e) {
+					$reviewObjects=[];
 				}
 
-				$newVisit['numberOfReview'] = count($reviewObjects);
-				$newVisit['reviewDoneBy'] = [];
-				$newVisit['reviewDetailsArray'] = [];
+				$newVisit['numberOfReview']=count($reviewObjects);
+				$newVisit['reviewDoneBy']=[];
+				$newVisit['reviewDetailsArray']=[];
 				foreach ($reviewObjects as $review) {
-					$reviewerObject = $review->getUserObject();
-					$details['user'] = $reviewerObject->lastName . " " . $reviewerObject->firstName;
-					$details['date'] = $review->reviewDate;
-					$newVisit['reviewDetailsArray'][] = $details;
-					$newVisit['reviewDoneBy'][] = $reviewerObject->lastName . " " . $reviewerObject->firstName;
+					$reviewerObject=$review->getUserObject();
+					$details['user']=$reviewerObject->lastName." ".$reviewerObject->firstName;
+					$details['date']=$review->reviewDate;
+					$newVisit['reviewDetailsArray'][]=$details;
+					$newVisit['reviewDoneBy'][]=$reviewerObject->lastName." ".$reviewerObject->firstName;
 				}
 
 				//Determine missing reviewer for this visit
-				$newVisit['reviewNotDoneBy'] = array_diff($availableReviewers, $newVisit['reviewDoneBy']);
+				$newVisit['reviewNotDoneBy']=array_diff($availableReviewers, $newVisit['reviewDoneBy']);
 
 				//Add all data to the global map
-				$reviewdetailsMap[$createdVisit->id_visit] = $newVisit;
+				$reviewdetailsMap[$createdVisit->id_visit]=$newVisit;
 			}
 		}
 		return $reviewdetailsMap;

src/models/Visit_Type.php

Spacing +9 added lines, -9 removed lines

@@ -16,7 +16,7 @@ 
 /**
  * Acces data of Visit Type table
  */
-Class Visit_Type{
+Class Visit_Type {
     
     public $id;
     public $groupId;
@@ -33,10 +33,10 @@ 
 
     public $linkpdo;
     
-    public function __construct(PDO $linkpdo, int $visitTypeId){
+    public function __construct(PDO $linkpdo, int $visitTypeId) {
         
         $this->linkpdo=$linkpdo;
-        $visitTypeQuery = $this->linkpdo->prepare('SELECT * FROM visit_type WHERE id = :visitTypeId');
+        $visitTypeQuery=$this->linkpdo->prepare('SELECT * FROM visit_type WHERE id = :visitTypeId');
         $visitTypeQuery->execute(array('visitTypeId' => $visitTypeId));
         $visitType=$visitTypeQuery->fetch(PDO::FETCH_ASSOC);
 
@@ -55,8 +55,8 @@ 
         
     }
 
-    public static function getVisitTypeByName($groupId, String $visitName,PDO $linkpdo) : Visit_Type {
-        $visitTypeQuery = $linkpdo->prepare('SELECT id FROM visit_type WHERE group_id = :groupId AND name= :name');
+    public static function getVisitTypeByName($groupId, String $visitName, PDO $linkpdo) : Visit_Type {
+        $visitTypeQuery=$linkpdo->prepare('SELECT id FROM visit_type WHERE group_id = :groupId AND name= :name');
         $visitTypeQuery->execute(array('groupId' => $groupId, 'name'=>$visitName));
         $visitTypeId=$visitTypeQuery->fetch(PDO::FETCH_COLUMN);
         return new Visit_Type($linkpdo, $visitTypeId);
@@ -82,7 +82,7 @@ 
      * @return array
      */
     public function getSpecificTableInputType() : Array {
-        $query = $this->linkpdo->prepare('SELECT COLUMN_NAME, COLUMN_TYPE FROM INFORMATION_SCHEMA.COLUMNS WHERE TABLE_NAME="'.$this->tableReviewSpecificName.'"');
+        $query=$this->linkpdo->prepare('SELECT COLUMN_NAME, COLUMN_TYPE FROM INFORMATION_SCHEMA.COLUMNS WHERE TABLE_NAME="'.$this->tableReviewSpecificName.'"');
         $query->execute();
         $datas=$query->fetchAll(PDO::FETCH_ASSOC);
         
@@ -94,9 +94,9 @@ 
         return new Visit_Group($this->linkpdo, $this->groupId);
     }
     
-    public static function createVisitType(string $studyName, Visit_Group $visitGroup, String $visitName, int $order, int $limitLowDays, int $limitUpDays, bool $localFormNeed, bool $qcNeeded, bool $reviewNeeded, bool $optional, String $anonProfile, PDO $linkpdo){
+    public static function createVisitType(string $studyName, Visit_Group $visitGroup, String $visitName, int $order, int $limitLowDays, int $limitUpDays, bool $localFormNeed, bool $qcNeeded, bool $reviewNeeded, bool $optional, String $anonProfile, PDO $linkpdo) {
         
-        $req = $linkpdo->prepare('INSERT INTO visit_type (group_id, name, table_review_specific, visit_order, local_form_needed, qc_needed, review_needed, optional, limit_low_days, limit_up_days, anon_profile)
+        $req=$linkpdo->prepare('INSERT INTO visit_type (group_id, name, table_review_specific, visit_order, local_form_needed, qc_needed, review_needed, optional, limit_low_days, limit_up_days, anon_profile)
                                       VALUES(:groupId, :visitName, :tableSpecific, :order, :localFormNeeded, :qcNeeded, :reviewNeeded, :optional, :limitLowDays, :limitUpDays, :anonProfile)');
         
         $tableSpecificName=$visitGroup->groupModality."_".$studyName."_".$visitName;
@@ -115,7 +115,7 @@ 
         ));
         
         //Create specific table of the visit for form with relation with the review table
-        $req = $linkpdo->prepare(' CREATE TABLE '.$tableSpecificName.' (id_review integer(11) NOT NULL, PRIMARY KEY (id_review));
+        $req=$linkpdo->prepare(' CREATE TABLE '.$tableSpecificName.' (id_review integer(11) NOT NULL, PRIMARY KEY (id_review));
             ALTER TABLE '.$tableSpecificName.' ADD FOREIGN KEY fk_idReview (id_review) REFERENCES reviews(id_review);
             ALTER TABLE '.$tableSpecificName.' ADD PRIMARY KEY (`id_review`); ');
         

src/models/Orthanc_Serie.php

Spacing +17 added lines, -17 removed lines

@@ -17,7 +17,7 @@ 
  * Collect serie's data from Orthanc Server
  */
 
-Class Orthanc_Serie{
+Class Orthanc_Serie {
 	
 	public $serieOrthancID;
 	public $parentStudyOrthancID;
@@ -52,7 +52,7 @@ 
 	public function __construct($seriesOrthancID, $url, $context) {
 	    //Set Orthanc http address
 	    $this->url=$url;
-	    $this->context = $context;
+	    $this->context=$context;
 	    
 		//Set the current serie's Orthanc ID
 		$this->serieOrthancID=$seriesOrthancID;
@@ -61,12 +61,12 @@ 
 	/**
 	 *Get Series related data and store them in this object
 	 */
-	public function retrieveSeriesData(){
-	    $context  = stream_context_create($this->context);
+	public function retrieveSeriesData() {
+	    $context=stream_context_create($this->context);
 	    //Store all shared tags
-	    $this->sharedTags = json_decode(file_get_contents($this->url.'/series/'.$this->serieOrthancID.'/shared-tags', false, $context));
+	    $this->sharedTags=json_decode(file_get_contents($this->url.'/series/'.$this->serieOrthancID.'/shared-tags', false, $context));
 		//parse main series informations
-	    $json = file_get_contents($this->url.'/series/'.$this->serieOrthancID, false, $context);
+	    $json=file_get_contents($this->url.'/series/'.$this->serieOrthancID, false, $context);
 		$seriesJson=json_decode($json, true);
 		//add needed informations in the current object
 		$this->seriesManufacturer=$seriesJson['MainDicomTags']['Manufacturer'];
@@ -76,7 +76,7 @@ 
 		$this->seriesDescription=$seriesJson['MainDicomTags']['SeriesDescription'];
 		$this->seriesInstanceUID=$seriesJson['MainDicomTags']['SeriesInstanceUID'];
 		$this->seriesNumber=$seriesJson['MainDicomTags']['SeriesNumber'];
-		$this->seriesIsStable= $seriesJson['IsStable'];
+		$this->seriesIsStable=$seriesJson['IsStable'];
 		$this->parentStudyOrthancID=$seriesJson['ParentStudy'];
 		$this->seriesInstances=$seriesJson['Instances'];
 		$this->numberOfInstanceInOrthanc=sizeof($seriesJson['Instances']);
@@ -93,9 +93,9 @@ 
 	/**
 	 * Get statistics of the series (size in MB)
 	 */
-	private function retrieveSeriesStatistics(){
-	    $context  = stream_context_create($this->context);
-	    $json = file_get_contents($this->url.'/series/'.$this->serieOrthancID.'/statistics/', false, $context);
+	private function retrieveSeriesStatistics() {
+	    $context=stream_context_create($this->context);
+	    $json=file_get_contents($this->url.'/series/'.$this->serieOrthancID.'/statistics/', false, $context);
 	    $statisticsJson=json_decode($json, true);
 	    $this->diskSizeMb=$statisticsJson['DiskSizeMB'];
 	    $this->uncompressedSizeMb=$statisticsJson['UncompressedSizeMB'];
@@ -106,16 +106,16 @@ 
 	 * Store some data only available in the Instance level 
 	 * @param $instanceID
 	 */
-	private function retrieveInstancesData($instanceID){
-	    $context  = stream_context_create($this->context);
-	    $json = file_get_contents($this->url.'/instances/'.$instanceID.'/tags/', false, $context);
+	private function retrieveInstancesData($instanceID) {
+	    $context=stream_context_create($this->context);
+	    $json=file_get_contents($this->url.'/instances/'.$instanceID.'/tags/', false, $context);
 	    $instanceJson=json_decode($json, true);
 	    $this->patientWeight=$instanceJson['0010,1030']['Value'];
 	    $this->seriesModelName=$instanceJson['0008,1090']['Value'];
 	    $this->injectedDose=$instanceJson['0054,0016']['Value'][0]['0018,1074']['Value'];
 	    //SK InjectedTime est deprecie en faveur de DateTime, A surveiller pour la suite
-	    $this->injectedTime=$instanceJson['0054,0016']['Value'][0]['0018,1072']['Value'] ;
-	    $this->injectedDateTime=$instanceJson['0054,0016']['Value'][0]['0018,1078']['Value'] ;
+	    $this->injectedTime=$instanceJson['0054,0016']['Value'][0]['0018,1072']['Value'];
+	    $this->injectedDateTime=$instanceJson['0054,0016']['Value'][0]['0018,1078']['Value'];
 	    $this->injectedActivity=$instanceJson['0054,0016']['Value'][0]['0018,1077']['Value'];
 	    $this->radiopharmaceutical=$instanceJson['0054,0016']['Value'][0]['0018,0031']['Value'];
 	    $this->halfLife=$instanceJson['0054,0016']['Value'][0]['0018,1075']['Value'];
@@ -126,7 +126,7 @@ 
 	 * Return if this serie  in a secondary capture type
 	 * @return boolean
 	 */
-	public function isSecondaryCapture(){
+	public function isSecondaryCapture() {
 		$scUids[]="1.2.840.10008.5.1.4.1.1.7";
 		$scUids[]="1.2.840.10008.5.1.4.1.1.7.1";
 		$scUids[]="1.2.840.10008.5.1.4.1.1.7.2";
@@ -141,7 +141,7 @@ 
 		$scUids[]="1.2.840.10008.5.1.4.1.1.88.65";
 		$scUids[]="1.2.840.10008.5.1.4.1.1.88.67";
 		
-		if(in_array($this->sopClassUid, $scUids)){
+		if (in_array($this->sopClassUid, $scUids)) {
 			return true;
 		}else {
 			return false;