@@ -60,12 +60,19 @@ |
||
| 60 | 60 | */ |
| 61 | 61 | |
| 62 | 62 | public function isDocumentationAllowedForRole(String $role){ |
| 63 | - if($role==User::INVESTIGATOR) return $this->accessInvestigator; |
|
| 64 | - else if($role==User::CONTROLLER) return $this->accessController; |
|
| 65 | - else if($role==User::MONITOR) return $this->accessMonitor; |
|
| 66 | - else if($role==User::REVIEWER) return $this->accessReviewer; |
|
| 67 | - else if($role==User::SUPERVISOR) return true; |
|
| 68 | - else return false; |
|
| 63 | + if($role==User::INVESTIGATOR) { |
|
| 64 | + return $this->accessInvestigator; |
|
| 65 | + } else if($role==User::CONTROLLER) { |
|
| 66 | + return $this->accessController; |
|
| 67 | + } else if($role==User::MONITOR) { |
|
| 68 | + return $this->accessMonitor; |
|
| 69 | + } else if($role==User::REVIEWER) { |
|
| 70 | + return $this->accessReviewer; |
|
| 71 | + } else if($role==User::SUPERVISOR) { |
|
| 72 | + return true; |
|
| 73 | + } else { |
|
| 74 | + return false; |
|
| 75 | + } |
|
| 69 | 76 | } |
| 70 | 77 | |
| 71 | 78 | /** |
@@ -148,7 +148,7 @@ discard block |
||
| 148 | 148 | require_once($specificObjectFile); |
| 149 | 149 | $objectName=$this->patientStudy."_Patient_Visit_Manager"; |
| 150 | 150 | return new $objectName($this, $visitGroupObject, $this->linkpdo); |
| 151 | - }else{ |
|
| 151 | + } else{ |
|
| 152 | 152 | return new Patient_Visit_Manager($this, $visitGroupObject, $this->linkpdo); |
| 153 | 153 | } |
| 154 | 154 | |
@@ -207,7 +207,7 @@ discard block |
||
| 207 | 207 | foreach($possiblevisitsGroups as $visitGroup){ |
| 208 | 208 | try{ |
| 209 | 209 | $availableVisits=$this->getPatientVisitManager($visitGroup)->getAvailableVisitsToCreate(); |
| 210 | - }catch (Exception $e){ |
|
| 210 | + } catch (Exception $e){ |
|
| 211 | 211 | $availableVisits=array($e->getMessage()); |
| 212 | 212 | } |
| 213 | 213 | |
@@ -124,7 +124,9 @@ |
||
| 124 | 124 | $visitObject = new Visit($visitId, $this->linkpdo); |
| 125 | 125 | |
| 126 | 126 | if (!empty($username)) { |
| 127 | - if ($visitObject->isAwaitingReviewForReviewerUser($username)) $visitObjectArray[] = $visitObject; |
|
| 127 | + if ($visitObject->isAwaitingReviewForReviewerUser($username)) { |
|
| 128 | + $visitObjectArray[] = $visitObject; |
|
| 129 | + } |
|
| 128 | 130 | } else { |
| 129 | 131 | $visitObjectArray[] = $visitObject; |
| 130 | 132 | } |
@@ -143,7 +143,7 @@ |
||
| 143 | 143 | |
| 144 | 144 | if(in_array($this->sopClassUid, $scUids)){ |
| 145 | 145 | return true; |
| 146 | - }else { |
|
| 146 | + } else { |
|
| 147 | 147 | return false; |
| 148 | 148 | } |
| 149 | 149 | |
@@ -47,10 +47,10 @@ discard block |
||
| 47 | 47 | session_unset(); // unset $_SESSION variable for the run-time |
| 48 | 48 | session_destroy(); // destroy session data in storage |
| 49 | 49 | self::redirectAndEndScript(); |
| 50 | - }else if(empty($_SESSION)){ |
|
| 50 | + } else if(empty($_SESSION)){ |
|
| 51 | 51 | //if session already empty |
| 52 | 52 | self::redirectAndEndScript(); |
| 53 | - }else{ |
|
| 53 | + } else{ |
|
| 54 | 54 | $_SESSION['LAST_ACTIVITY'] = time(); // update last activity time stamp |
| 55 | 55 | } |
| 56 | 56 | |
@@ -84,14 +84,16 @@ discard block |
||
| 84 | 84 | //Instanciate PDO connexion with SSL or not |
| 85 | 85 | if(DATABASE_SSL){ |
| 86 | 86 | $linkpdo= new PDO('mysql:host='.DATABASE_HOST.';dbname='.DATABASE_NAME.';charset=UTF8', ''.DATABASE_USERNAME.'', ''.DATABASE_PASSWORD.'', self::getSSLPDOArrayOptions() ); |
| 87 | - }else{ |
|
| 87 | + } else{ |
|
| 88 | 88 | $linkpdo= new PDO('mysql:host='.DATABASE_HOST.';dbname='.DATABASE_NAME.';charset=UTF8', ''.DATABASE_USERNAME.'', ''.DATABASE_PASSWORD.''); |
| 89 | 89 | } |
| 90 | 90 | |
| 91 | 91 | $linkpdo->setAttribute(PDO::ATTR_ERRMODE, PDO::ERRMODE_EXCEPTION); |
| 92 | 92 | |
| 93 | 93 | //Load preferences from the database |
| 94 | - if(! defined('GAELO_PATIENT_CODE_LENGHT') ) Session::loadPreferencesInConstants($linkpdo); |
|
| 94 | + if(! defined('GAELO_PATIENT_CODE_LENGHT') ) { |
|
| 95 | + Session::loadPreferencesInConstants($linkpdo); |
|
| 96 | + } |
|
| 95 | 97 | |
| 96 | 98 | return $linkpdo; |
| 97 | 99 | } |
@@ -121,7 +123,7 @@ discard block |
||
| 121 | 123 | $log->pushHandler(new RotatingFileHandler($_SERVER["DOCUMENT_ROOT"].'/data/logs/gaelO.log', Logger::INFO)); |
| 122 | 124 | $log->pushProcessor(new WebProcessor()); |
| 123 | 125 | $log->info($stringInfo); |
| 124 | - }else{ |
|
| 126 | + } else{ |
|
| 125 | 127 | error_log("Can't write logs folder"); |
| 126 | 128 | } |
| 127 | 129 | } |
@@ -34,7 +34,7 @@ |
||
| 34 | 34 | 'role' => $role |
| 35 | 35 | )); |
| 36 | 36 | |
| 37 | - }else{ |
|
| 37 | + } else{ |
|
| 38 | 38 | $queryTracker = $linkpdo->prepare('SELECT * FROM tracker WHERE study = :study AND role=:role'); |
| 39 | 39 | $queryTracker->execute(array('study' => $study, |
| 40 | 40 | 'role' => $role, |
@@ -58,8 +58,7 @@ discard block |
||
| 58 | 58 | if(GAELO_DATE_FORMAT=='m.d.Y'){ |
| 59 | 59 | $birthDay=intval($birthDateArray[1]); |
| 60 | 60 | $birthMonth=intval($birthDateArray[0]); |
| 61 | - } |
|
| 62 | - else if(GAELO_DATE_FORMAT=='d.m.Y'){ |
|
| 61 | + } else if(GAELO_DATE_FORMAT=='d.m.Y'){ |
|
| 63 | 62 | $birthDay=intval($birthDateArray[0]); |
| 64 | 63 | $birthMonth=intval($birthDateArray[1]); |
| 65 | 64 | } |
@@ -71,8 +70,7 @@ discard block |
||
| 71 | 70 | //Store the patient result import process in this object |
| 72 | 71 | if ($insertddb){ |
| 73 | 72 | $this->sucessList[] = $patientNumber; |
| 74 | - } |
|
| 75 | - else{ |
|
| 73 | + } else{ |
|
| 76 | 74 | $patientFailed['PatientNumber']=$patientNumber; |
| 77 | 75 | $patientFailed['Reason']="Can't write to DB, wrong date or other wrong input"; |
| 78 | 76 | $this->failList[]=$patientFailed; |
@@ -84,8 +82,7 @@ discard block |
||
| 84 | 82 | if(!$isExistingCenter) { |
| 85 | 83 | if( empty($patientInvestigatorNumCenter) ){ |
| 86 | 84 | $this->failList['Missing Num Center'][]=$patientNumber; |
| 87 | - } |
|
| 88 | - else { |
|
| 85 | + } else { |
|
| 89 | 86 | $this->failList['Unknown Center'][]=$patientNumber; |
| 90 | 87 | } |
| 91 | 88 | |
@@ -117,8 +114,7 @@ discard block |
||
| 117 | 114 | if(GAELO_DATE_FORMAT=='m.d.Y'){ |
| 118 | 115 | $registrationDay=intval($dateNbArray[1]); |
| 119 | 116 | $registrationMonth=intval($dateNbArray[0]); |
| 120 | - } |
|
| 121 | - else if(GAELO_DATE_FORMAT=='d.m.Y'){ |
|
| 117 | + } else if(GAELO_DATE_FORMAT=='d.m.Y'){ |
|
| 122 | 118 | $registrationDay=intval($dateNbArray[0]); |
| 123 | 119 | $registrationMonth=intval($dateNbArray[1]); |
| 124 | 120 | } |
@@ -148,7 +144,7 @@ discard block |
||
| 148 | 144 | private function isNewPatient($patientCode){ |
| 149 | 145 | try{ |
| 150 | 146 | new Patient($patientCode, $this->linkpdo); |
| 151 | - }catch(Exception $e1){ |
|
| 147 | + } catch(Exception $e1){ |
|
| 152 | 148 | return true; |
| 153 | 149 | } |
| 154 | 150 | |
@@ -176,11 +172,13 @@ discard block |
||
| 176 | 172 | * @return boolean |
| 177 | 173 | */ |
| 178 | 174 | private function isExistingCenter($patientNumCenter){ |
| 179 | - if(is_null($patientNumCenter) || strlen($patientNumCenter)==0) return false; |
|
| 175 | + if(is_null($patientNumCenter) || strlen($patientNumCenter)==0) { |
|
| 176 | + return false; |
|
| 177 | + } |
|
| 180 | 178 | |
| 181 | 179 | try{ |
| 182 | 180 | new Center($this->linkpdo, $patientNumCenter); |
| 183 | - }catch(Exception $e1){ |
|
| 181 | + } catch(Exception $e1){ |
|
| 184 | 182 | return false; |
| 185 | 183 | } |
| 186 | 184 | |
@@ -250,11 +248,14 @@ discard block |
||
| 250 | 248 | foreach ($this->failList as $key=>$value){ |
| 251 | 249 | if(! empty($value)){ |
| 252 | 250 | $failReport=$failReport.$key.':<br>'; |
| 253 | - if(is_array($value)) $failReport=$failReport.implode('<br>',$value).'<br>'; |
|
| 254 | - else $failReport=$failReport.$value.'<br>'; |
|
| 251 | + if(is_array($value)) { |
|
| 252 | + $failReport=$failReport.implode('<br>',$value).'<br>'; |
|
| 253 | + } else { |
|
| 254 | + $failReport=$failReport.$value.'<br>'; |
|
| 255 | + } |
|
| 255 | 256 | } |
| 256 | 257 | } |
| 257 | - }else{ |
|
| 258 | + } else{ |
|
| 258 | 259 | $failReport=$failReport.' None <br>' ; |
| 259 | 260 | } |
| 260 | 261 | |
@@ -64,10 +64,10 @@ discard block |
||
| 64 | 64 | } |
| 65 | 65 | $this->visitObject->changeUploadStatus(Visit::DONE, $this->username); |
| 66 | 66 | |
| 67 | - }catch(Exception $e1){ |
|
| 67 | + } catch(Exception $e1){ |
|
| 68 | 68 | throw new Exception("Error during import ".$e1->getMessage()); |
| 69 | 69 | } |
| 70 | - }else{ |
|
| 70 | + } else{ |
|
| 71 | 71 | throw new Exception("Error during import Study Already Known"); |
| 72 | 72 | } |
| 73 | 73 | } |
@@ -267,12 +267,12 @@ discard block |
||
| 267 | 267 | if($dateObject!==false){ |
| 268 | 268 | $parsedDateTime=$dateObject->format('H:i:s'); |
| 269 | 269 | } |
| 270 | - }else if($type==1){ |
|
| 270 | + } else if($type==1){ |
|
| 271 | 271 | $dateObject=DateTime::createFromFormat('Ymd', $string); |
| 272 | 272 | if($dateObject!==false){ |
| 273 | 273 | $parsedDateTime=$dateObject->format('Y-m-d'); |
| 274 | 274 | } |
| 275 | - }else if($type==0){ |
|
| 275 | + } else if($type==0){ |
|
| 276 | 276 | $dateObject=DateTime::createFromFormat('YmdHis', $string); |
| 277 | 277 | if($dateObject!==false){ |
| 278 | 278 | $parsedDateTime=$dateObject->format('Y-m-d H:i:s'); |
@@ -55,7 +55,7 @@ |
||
| 55 | 55 | ) |
| 56 | 56 | ); |
| 57 | 57 | |
| 58 | - }else{ |
|
| 58 | + } else{ |
|
| 59 | 59 | $this->url=$url; |
| 60 | 60 | $this->context = $context; |
| 61 | 61 | } |