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<?php |
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/** |
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Copyright (C) 2018-2020 KANOUN Salim |
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This program is free software; you can redistribute it and/or modify |
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it under the terms of the Affero GNU General Public v.3 License as published by |
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the Free Software Foundation; |
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This program is distributed in the hope that it will be useful, |
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but WITHOUT ANY WARRANTY; without even the implied warranty of |
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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Affero GNU General Public Public for more details. |
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You should have received a copy of the Affero GNU General Public Public along |
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with this program; if not, write to the Free Software Foundation, Inc., |
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51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA |
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*/ |
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/** |
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* Access visit data |
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*/ |
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class Visit { |
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private $linkpdo; |
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public $id_visit; |
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public $creatorName; |
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public $creationDate; |
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public $qcStatus; |
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public $reviewStatus; |
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public $statusDone; |
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public $reasonForNotDone; |
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public $uploadStatus; |
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public $uploadDate; |
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public $uploaderUsername; |
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public $acquisitionDate; |
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public $stateInvestigatorForm; |
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public $stateQualityControl; |
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public $formQualityControl; |
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public $imageQualityControl; |
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public $newSeriesUpload; |
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public $investigatorFormIsCorrected; |
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public $otherCorrectiveAction; |
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public $correctiveActionDecision; |
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public $formQualityComment; |
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public $imageQualityComment; |
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public $controllerUsername; |
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public $controlDate; |
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public $correctiveActionUsername; |
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public $correctiveActionDate; |
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public $visitTypeId; |
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public $study; |
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public $patientCode; |
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public $visitType; |
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public $reviewAvailable; |
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public $reviewConclusionDate; |
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public $reviewConclusion; |
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public $reviewTargetLesions; |
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public $lastReminderUpload; |
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public $deleted; |
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public $studyDicomObject; |
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public $visitGroupObject; |
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const QC_NOT_DONE="Not Done"; |
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const QC_ACCEPTED="Accepted"; |
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const QC_REFUSED="Refused"; |
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const QC_WAIT_DEFINITVE_CONCLUSION="Wait Definitive Conclusion"; |
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const QC_CORRECTIVE_ACTION_ASKED="Corrective Action Asked"; |
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const LOCAL_FORM_NOT_DONE="Not Done"; |
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const LOCAL_FORM_DRAFT="Draft"; |
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const LOCAL_FORM_DONE="Done"; |
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const DONE="Done"; |
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const NOT_DONE="Not Done"; |
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const UPLOAD_PROCESSING="Processing"; |
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const REVIEW_NOT_DONE='Not Done'; |
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const REVIEW_ONGOING='Ongoing'; |
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const REVIEW_WAIT_ADJUDICATION='Wait Adjudication'; |
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const REVIEW_DONE='Done'; |
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public function __construct($id_visit, PDO $linkpdo) { |
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$this->linkpdo=$linkpdo; |
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$this->id_visit=$id_visit; |
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$this->refreshVisitData(); |
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} |
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/** |
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* Refresh this current object proprieties from database |
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*/ |
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private function refreshVisitData() { |
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$visitQuery=$this->linkpdo->prepare('SELECT * FROM visits WHERE id_visit=:idVisit'); |
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$visitQuery->execute(array('idVisit' => $this->id_visit)); |
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$visitDbData=$visitQuery->fetch(PDO::FETCH_ASSOC); |
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$this->creatorName=$visitDbData['creator_name']; |
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$this->creationDate=$visitDbData['creation_date']; |
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$this->qcStatus=$visitDbData['state_quality_control']; |
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$this->controllerUsername=$visitDbData['controller_username']; |
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$this->controlDate=$visitDbData['control_date']; |
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$this->formQualityControl=$visitDbData['form_quality_control']; |
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$this->imageQualityControl=$visitDbData['image_quality_control']; |
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$this->formQualityComment=$visitDbData['form_quality_comment']; |
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$this->imageQualityComment=$visitDbData['image_quality_comment']; |
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$this->statusDone=$visitDbData['status_done']; |
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$this->reasonForNotDone=$visitDbData['reason_for_not_done']; |
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$this->visitTypeId=$visitDbData['visit_type_id']; |
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$this->patientCode=$visitDbData['patient_code']; |
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$this->uploadStatus=$visitDbData['upload_status']; |
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$this->acquisitionDate=$visitDbData['acquisition_date']; |
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$this->stateInvestigatorForm=$visitDbData['state_investigator_form']; |
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$this->stateQualityControl=$visitDbData['state_quality_control']; |
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$this->newSeriesUpload=$visitDbData['corrective_action_new_upload']; |
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$this->investigatorFormIsCorrected=$visitDbData['corrective_action_investigator_form']; |
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$this->otherCorrectiveAction=$visitDbData['corrective_action_other']; |
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$this->correctiveActionDecision=$visitDbData['corrective_action_decision']; |
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$this->reviewAvailable=$visitDbData['review_available']; |
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$this->reviewStatus=$visitDbData['review_status']; |
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$this->reviewConclusionDate=$visitDbData['review_conclusion_date']; |
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$this->reviewTargetLesions=$visitDbData['review_target_lesions']; |
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$this->reviewConclusion=$visitDbData['review_conclusion_value']; |
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$this->correctiveActionUsername=$visitDbData['corrective_action_username']; |
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$this->correctiveActionDate=$visitDbData['corrective_action_date']; |
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$this->deleted=$visitDbData['deleted']; |
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$this->lastReminderUpload=$visitDbData['last_reminder_upload']; |
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//Get VisitType detail |
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$this->visitTypeObject=new Visit_Type($this->linkpdo, $this->visitTypeId); |
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$this->visitType=$this->visitTypeObject->name; |
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//Get VisitGroup details |
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$this->visitGroupObject=new Visit_Group($this->linkpdo, $this->visitTypeObject->groupId); |
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$this->study=$this->visitGroupObject->studyName; |
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if ($this->uploadStatus == Visit::DONE) { |
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$studyDicomObject=$this->getStudyDicomDetails(); |
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$this->uploaderUsername=$studyDicomObject->uploaderUsername; |
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$this->uploadDate=$studyDicomObject->uploadDate; |
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} |
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} |
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public function getImmutableAcquisitionDate() { |
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return new DateTimeImmutable($this->acquisitionDate); |
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} |
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/** |
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* return Patient Object of this visit |
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* @return Patient |
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*/ |
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public function getPatient() { |
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return new Patient($this->patientCode, $this->linkpdo); |
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} |
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/** |
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* Update upload status of this visit |
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* if upload set to done, eventually skip local form/ QC and trgger upload notification method |
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* @param string $uploadStatus |
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* @param string $username |
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*/ |
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public function changeUploadStatus(string $uploadStatus, ?string $username=null) { |
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$changeStatusUpload=$this->linkpdo->prepare('UPDATE visits SET upload_status= :statusDone WHERE id_visit = :idvisit'); |
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$changeStatusUpload->execute(array( |
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'statusDone'=>$uploadStatus, |
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'idvisit'=> $this->id_visit) |
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); |
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//Update status in this object |
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$this->refreshVisitData(); |
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if ($uploadStatus == Visit::DONE) { |
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$this->skipQcIfNeeded(); |
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$this->sendUploadedVisitEmailToController($username); |
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} |
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} |
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public function updateLastReminderUpload() { |
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$changeReminderUpload=$this->linkpdo->prepare('UPDATE visits SET last_reminder_upload= :lastReminderDateTime WHERE id_visit = :idvisit'); |
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$changeReminderUpload->execute(array( |
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'lastReminderDateTime'=> date("Y-m-d H:i:s"), |
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'idvisit'=> $this->id_visit) |
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); |
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} |
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/** |
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* If Form and / or QC not needed skip these step by writing done in database for each status |
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*/ |
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private function skipQcIfNeeded() { |
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$visitType=$this->getVisitCharacteristics(); |
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if (!$visitType->localFormNeeded || !$visitType->qcNeeded) { |
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//If QC Not needed validate it |
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if (!$visitType->qcNeeded) { |
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$this->editQc(true, true, null, null, Visit::QC_ACCEPTED, null); |
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} |
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//If form Not Needed put investigator form to Done |
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if (!$visitType->localFormNeeded) { |
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$this->changeVisitStateInvestigatorForm(Visit::DONE); |
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} |
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} |
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} |
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/** |
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* Reset QC and corrective action of the visit |
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*/ |
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public function resetQC() { |
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$update=$this->linkpdo->prepare('UPDATE visits |
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SET state_quality_control = "Not Done", |
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controller_username=NULL, |
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control_date=NULL, |
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image_quality_control=0, |
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form_quality_control=0, |
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image_quality_comment=NULL, |
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form_quality_comment=NULL, |
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corrective_action_investigator_form=NULL, |
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corrective_action_date=NULL, |
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corrective_action_username=NULL, |
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corrective_action_other=NULL, |
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corrective_action_decision=NULL, |
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corrective_action_new_upload=0 |
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WHERE (id_visit = :id_visit AND deleted=0)'); |
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$update->execute(array('id_visit' => $this->id_visit)); |
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//Set visit to not review available (include a refresh of the current object) |
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$this->changeReviewAvailability(false); |
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} |
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/** |
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* Return visit type object related to this visit |
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* @return Visit_Type |
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*/ |
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public function getVisitCharacteristics() : Visit_Type { |
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return $this->visitTypeObject; |
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} |
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/** |
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* Return visit group object related to this visit |
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*/ |
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public function getVisitGroup() : Visit_Group { |
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return $this->visitGroupObject; |
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} |
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/** |
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* Retrun series Orthanc ID of this visit |
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* @param bool $deletedSeries |
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* @return String[] |
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*/ |
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public function getSeriesOrthancID(bool $deletedSeries=false) { |
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$seriesObjects=$this->getSeriesDetails($deletedSeries); |
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$orthancSeriesIDs=[]; |
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foreach ($seriesObjects as $seriesObject) { |
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$orthancSeriesIDs[]=$seriesObject->seriesOrthancID; |
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} |
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return $orthancSeriesIDs; |
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} |
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/** |
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* Return study details of this visit (only one if calling non deleted) |
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* @param bool $deletedStudies |
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* @return Study_Details|Study_Details[] |
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*/ |
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public function getStudyDicomDetails(bool $deletedStudies=false) { |
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$idFetcher=$this->linkpdo->prepare("SELECT Study_Orthanc_ID FROM orthanc_studies |
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WHERE deleted=:deleted |
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AND id_visit=:idVisit"); |
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$idFetcher->execute(array( |
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"idVisit" => $this->id_visit, |
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"deleted"=>intval($deletedStudies) |
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)); |
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$orthancStudyIDs=$idFetcher->fetchAll(PDO::FETCH_COLUMN); |
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$studyDetails=[]; |
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foreach ($orthancStudyIDs as $studyOrthancId) { |
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$studyDetails[]=new Study_Details($studyOrthancId, $this->linkpdo); |
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} |
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if (!$deletedStudies && !empty($studyDetails)) { |
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return $studyDetails[0]; |
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} |
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return $studyDetails; |
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} |
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/** |
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* Return series details of this visit |
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* @param bool $deletedSeries |
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* @return Series_Details[] |
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*/ |
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public function getSeriesDetails(bool $deletedSeries=false) { |
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$orthancSeriesObjects=[]; |
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318
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$studyDicomObject=$this->getStudyDicomDetails(); |
|
319
|
|
|
|
|
320
|
|
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if (!empty($studyDicomObject)) { |
|
321
|
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|
$childSeriesObjects=$studyDicomObject->getChildSeries(); |
|
322
|
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foreach ($childSeriesObjects as $seriesObject) { |
|
323
|
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|
if ($seriesObject->deleted == $deletedSeries) { |
|
324
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$orthancSeriesObjects[]=$seriesObject; |
|
325
|
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} |
|
326
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} |
|
327
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} |
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328
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329
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return $orthancSeriesObjects; |
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330
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|
331
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} |
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332
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|
333
|
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|
334
|
|
|
/** |
|
335
|
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|
* Return reviews (local or reviewer) of this visit |
|
336
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* @param bool $local |
|
337
|
|
|
* @return Review|Review[] |
|
338
|
|
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*/ |
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339
|
|
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public function getReviewsObject(bool $local, bool $onlyValidated=false) { |
|
340
|
|
|
if(!$onlyValidated){ |
|
341
|
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|
$reviewQuery=$this->linkpdo->prepare('SELECT id_review FROM reviews WHERE id_visit=:idVisit AND deleted=0 AND is_local=:isLocal'); |
|
342
|
|
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|
|
343
|
|
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}else{ |
|
344
|
|
|
$reviewQuery=$this->linkpdo->prepare('SELECT id_review FROM reviews WHERE id_visit=:idVisit AND deleted=0 AND validated=1 AND is_local=:isLocal'); |
|
345
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|
|
346
|
|
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} |
|
347
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|
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|
|
348
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$reviewQuery->execute(array('idVisit' => $this->id_visit, 'isLocal'=>intval($local))); |
|
349
|
|
|
$reviewResults=$reviewQuery->fetchAll(PDO::FETCH_COLUMN); |
|
350
|
|
|
|
|
351
|
|
|
if (empty($reviewResults)) { |
|
352
|
|
|
throw new Exception('No Review Found'); |
|
353
|
|
|
} |
|
354
|
|
|
|
|
355
|
|
|
if ($local && sizeof($reviewResults) == 1) { |
|
356
|
|
|
return new Review($reviewResults[0], $this->linkpdo); |
|
357
|
|
|
} |
|
358
|
|
|
//Else put review object in an Array |
|
359
|
|
|
$reviewObjects=[]; |
|
360
|
|
|
foreach ($reviewResults as $reviewID) { |
|
361
|
|
|
$reviewObjects[]=new Review($reviewID, $this->linkpdo); |
|
362
|
|
|
} |
|
363
|
|
|
|
|
364
|
|
|
return $reviewObjects; |
|
365
|
|
|
|
|
366
|
|
|
} |
|
367
|
|
|
|
|
368
|
|
|
|
|
369
|
|
|
/** |
|
370
|
|
|
* return the existing reviewer review for this visit |
|
371
|
|
|
* @throws Exception if not available review for reviewer |
|
372
|
|
|
*/ |
|
373
|
|
|
public function queryExistingReviewForReviewer($username) { |
|
374
|
|
|
|
|
375
|
|
|
$reviewsObjects=$this->getReviewsObject(false); |
|
376
|
|
|
$filteredReview=array_filter($reviewsObjects, function($review) use ($username) { |
|
377
|
|
|
if ($review->username == $username) { |
|
378
|
|
|
return true; |
|
379
|
|
|
}else { |
|
380
|
|
|
return false; |
|
381
|
|
|
} |
|
382
|
|
|
}); |
|
383
|
|
|
$filteredReview=array_values($filteredReview); |
|
384
|
|
|
if (sizeof($filteredReview) == 1) return $filteredReview[0]; |
|
385
|
|
|
else throw new Exception('No review for reviwer'); |
|
386
|
|
|
|
|
387
|
|
|
} |
|
388
|
|
|
|
|
389
|
|
|
/** |
|
390
|
|
|
* Check that no activated visit exsits for this visit |
|
391
|
|
|
* @return boolean |
|
392
|
|
|
*/ |
|
393
|
|
|
private function isNoOtherActivatedVisit() { |
|
394
|
|
|
$visitQuery=$this->linkpdo->prepare('SELECT id_visit FROM visits |
|
395
|
|
|
WHERE visit_type_id=:visitTypeID AND patient_code=:patientCode AND deleted=0; |
|
396
|
|
|
'); |
|
397
|
|
|
$visitQuery->execute(array('visitTypeID' => $this->visitTypeId, |
|
398
|
|
|
'patientCode'=>$this->patientCode)); |
|
399
|
|
|
|
|
400
|
|
|
$dataVisits=$visitQuery->fetchAll(PDO::FETCH_COLUMN); |
|
401
|
|
|
|
|
402
|
|
|
if (empty($dataVisits)) { |
|
403
|
|
|
return true; |
|
404
|
|
|
}else { |
|
405
|
|
|
return false; |
|
406
|
|
|
} |
|
407
|
|
|
|
|
408
|
|
|
} |
|
409
|
|
|
|
|
410
|
|
|
/** |
|
411
|
|
|
* Update quality control data |
|
412
|
|
|
* @param bool $formAccepted |
|
413
|
|
|
* @param bool $imageAccepted |
|
414
|
|
|
* @param $formComment |
|
415
|
|
|
* @param $imageComment |
|
416
|
|
|
* @param $controlDecision |
|
417
|
|
|
* @param $usernameController |
|
418
|
|
|
*/ |
|
419
|
|
|
public function editQc(bool $formAccepted, bool $imageAccepted, $formComment, $imageComment, $controlDecision, $usernameController) { |
|
420
|
|
|
|
|
421
|
|
|
$req_update=$this->linkpdo->prepare('UPDATE visits |
|
422
|
|
|
SET form_quality_control = :form, |
|
423
|
|
|
image_quality_control = :image, |
|
424
|
|
|
form_quality_comment = :form_comment, |
|
425
|
|
|
image_quality_comment = :image_comment, |
|
426
|
|
|
state_quality_control= :decision, |
|
427
|
|
|
controller_username=:username, |
|
428
|
|
|
control_date=:date |
|
429
|
|
|
WHERE id_visit = :id_visit'); |
|
430
|
|
|
|
|
431
|
|
|
$req_update->execute(array( |
|
432
|
|
|
'id_visit' => $this->id_visit, |
|
433
|
|
|
'form' => intval($formAccepted), |
|
434
|
|
|
'image' => intval($imageAccepted), |
|
435
|
|
|
'form_comment' => $formComment, |
|
436
|
|
|
'image_comment' => $imageComment, |
|
437
|
|
|
'decision' =>$controlDecision, |
|
438
|
|
|
'username'=>$usernameController, |
|
439
|
|
|
'date'=>date("Y-m-d H:i:s") |
|
440
|
|
|
)); |
|
441
|
|
|
|
|
442
|
|
|
$this->refreshVisitData(); |
|
443
|
|
|
|
|
444
|
|
|
if ($controlDecision == Visit::QC_ACCEPTED) { |
|
445
|
|
|
if ($this->getVisitCharacteristics()->reviewNeeded) { |
|
446
|
|
|
//If review needed make it available for reviewers |
|
447
|
|
|
$this->changeReviewAvailability(true); |
|
448
|
|
|
}else if( ! $this->getVisitCharacteristics()->qcNeeded) { |
|
449
|
|
|
//The visit is QC accepted and will not go further as Review is not needed |
|
450
|
|
|
//Inform supervisors that the visit is well recieved |
|
451
|
|
|
//Do this only if QC is not needed as supervisor will get QC notification otherwise (avoid dual mail) |
|
452
|
|
|
$this->sendUploadNotificationToSupervisor(); |
|
453
|
|
|
} |
|
454
|
|
|
}else if ($controlDecision == Visit::QC_REFUSED){ |
|
455
|
|
|
$this->changeReviewAvailability(false); |
|
456
|
|
|
} |
|
457
|
|
|
|
|
458
|
|
|
} |
|
459
|
|
|
|
|
460
|
|
|
/** |
|
461
|
|
|
* update corrective action data |
|
462
|
|
|
* @param bool $newSeries |
|
463
|
|
|
* @param bool $formCorrected |
|
464
|
|
|
* @param bool $correctiveActionDecision |
|
465
|
|
|
* @param string $otherComment |
|
466
|
|
|
* @param string $username |
|
467
|
|
|
*/ |
|
468
|
|
|
public function setCorrectiveAction(bool $newSeries, bool $formCorrected, bool $correctiveActionDecision, string $otherComment, string $username) { |
|
469
|
|
|
//Write in the database |
|
470
|
|
|
$req_update=$this->linkpdo->prepare('UPDATE visits |
|
471
|
|
|
SET corrective_action_username=:username, |
|
472
|
|
|
corrective_action_date=:date, |
|
473
|
|
|
corrective_action_new_upload = :new_series, |
|
474
|
|
|
corrective_action_other = :other_comment, |
|
475
|
|
|
corrective_action_investigator_form = :invest_form, |
|
476
|
|
|
corrective_action_decision=:corrective_action, |
|
477
|
|
|
state_quality_control="Wait Definitive Conclusion" |
|
478
|
|
|
WHERE visits.id_visit = :id_visit' ); |
|
479
|
|
|
|
|
480
|
|
|
$req_update->execute(array( |
|
481
|
|
|
'username'=>$username, |
|
482
|
|
|
'date'=>date("Y-m-d H:i:s"), |
|
483
|
|
|
'id_visit' => $this->id_visit, |
|
484
|
|
|
'new_series' => intval($newSeries), |
|
485
|
|
|
'other_comment' => $otherComment, |
|
486
|
|
|
'invest_form' => intval($formCorrected), |
|
487
|
|
|
'corrective_action'=>intval($correctiveActionDecision) |
|
488
|
|
|
)); |
|
489
|
|
|
|
|
490
|
|
|
$this->refreshVisitData(); |
|
491
|
|
|
} |
|
492
|
|
|
|
|
493
|
|
|
/** |
|
494
|
|
|
* Delete / reactivate visit |
|
495
|
|
|
* @param bool $delete |
|
496
|
|
|
* @return boolean |
|
497
|
|
|
*/ |
|
498
|
|
|
public function changeDeletionStatus(bool $delete) { |
|
499
|
|
|
|
|
500
|
|
|
//If reactivation of Visit check that not other same activated visit type exist in the DB for this patient |
|
501
|
|
|
if ($delete == false && !$this->isNoOtherActivatedVisit()) { |
|
|
|
|
|
|
502
|
|
|
return false; |
|
503
|
|
|
} |
|
504
|
|
|
|
|
505
|
|
|
$connecter=$this->linkpdo->prepare('UPDATE visits SET deleted=:deletion WHERE id_visit = :idvisit'); |
|
506
|
|
|
$connecter->execute(array( |
|
507
|
|
|
"idvisit" => $this->id_visit, |
|
508
|
|
|
"deletion"=>intval($delete) |
|
509
|
|
|
)); |
|
510
|
|
|
|
|
511
|
|
|
$this->refreshVisitData(); |
|
512
|
|
|
|
|
513
|
|
|
return true; |
|
514
|
|
|
} |
|
515
|
|
|
|
|
516
|
|
|
/** |
|
517
|
|
|
* Update the Local Investigator Form status |
|
518
|
|
|
* If Done inform controller that visit await QC (sent if Form and upload done and QC not done) |
|
519
|
|
|
* @param string $status see visit constant (Not Done, Draft or Done) |
|
520
|
|
|
* @param string $username |
|
521
|
|
|
*/ |
|
522
|
|
|
public function changeVisitStateInvestigatorForm(string $status, ?string $username=null) { |
|
523
|
|
|
//Update Visit table |
|
524
|
|
|
$update=$this->linkpdo->prepare('UPDATE visits SET |
|
525
|
|
|
state_investigator_form = :formStatus WHERE id_visit = :id_visit'); |
|
526
|
|
|
|
|
527
|
|
|
$update->execute(array('formStatus'=>$status, 'id_visit' => $this->id_visit)); |
|
528
|
|
|
|
|
529
|
|
|
//Update data in this object |
|
530
|
|
|
$this->refreshVisitData(); |
|
531
|
|
|
|
|
532
|
|
|
if ($status == Visit::LOCAL_FORM_DONE) { |
|
533
|
|
|
$this->sendUploadedVisitEmailToController($username); |
|
534
|
|
|
} |
|
535
|
|
|
} |
|
536
|
|
|
|
|
537
|
|
|
/** |
|
538
|
|
|
* Update the review availability status according to boolean argument |
|
539
|
|
|
* @param boolean $available |
|
540
|
|
|
*/ |
|
541
|
|
|
public function changeReviewAvailability(bool $available) { |
|
542
|
|
|
$dbStatus=$this->linkpdo->prepare('UPDATE visits SET review_available =:available WHERE visits.id_visit = :idVisit'); |
|
543
|
|
|
$dbStatus->execute(array('idVisit'=>$this->id_visit, 'available'=>intval($available))); |
|
544
|
|
|
|
|
545
|
|
|
$this->refreshVisitData(); |
|
546
|
|
|
|
|
547
|
|
|
if ($available) { |
|
548
|
|
|
//If available notify reviewers of this study by email |
|
549
|
|
|
$this->sendAvailableReviewMail(); |
|
550
|
|
|
} |
|
551
|
|
|
} |
|
552
|
|
|
|
|
553
|
|
|
/** |
|
554
|
|
|
* Update review conclusion |
|
555
|
|
|
* @param string $reviewStatus |
|
556
|
|
|
* @param $conclusionValue |
|
557
|
|
|
*/ |
|
558
|
|
|
public function changeVisitValidationStatus(string $reviewStatus, $conclusionValue=null) { |
|
559
|
|
|
|
|
560
|
|
|
if ($reviewStatus == Visit::DONE) { |
|
561
|
|
|
$date=date("Y-m-d H:i:s"); |
|
562
|
|
|
} |
|
563
|
|
|
|
|
564
|
|
|
$dbStatus=$this->linkpdo->prepare('UPDATE visits SET |
|
565
|
|
|
review_status = :conclusionStatus, |
|
566
|
|
|
review_conclusion_value=:conclusionValue, |
|
567
|
|
|
review_conclusion_date=:conclusionDate |
|
568
|
|
|
WHERE visits.id_visit = :id_visit'); |
|
569
|
|
|
$dbStatus->execute(array( |
|
570
|
|
|
'id_visit' => $this->id_visit, |
|
571
|
|
|
'conclusionStatus'=> $reviewStatus, |
|
572
|
|
|
'conclusionDate'=>isset($date) ? $date : null, |
|
573
|
|
|
'conclusionValue'=>isset($conclusionValue) ? $conclusionValue : null |
|
574
|
|
|
)); |
|
575
|
|
|
|
|
576
|
|
|
$this->refreshVisitData(); |
|
577
|
|
|
|
|
578
|
|
|
} |
|
579
|
|
|
|
|
580
|
|
|
/** |
|
581
|
|
|
* Store final target lesions in database |
|
582
|
|
|
*/ |
|
583
|
|
|
public function changeReviewTargetLesions(?array $targetLesions) : void { |
|
584
|
|
|
$dbStatus=$this->linkpdo->prepare('UPDATE visits SET |
|
585
|
|
|
review_target_lesions = :reviewTargetLesions |
|
586
|
|
|
WHERE visits.id_visit = :id_visit'); |
|
587
|
|
|
$dbStatus->execute(array( |
|
588
|
|
|
'id_visit' => $this->id_visit, |
|
589
|
|
|
'reviewTargetLesions'=> json_encode($targetLesions), |
|
590
|
|
|
)); |
|
591
|
|
|
|
|
592
|
|
|
$this->refreshVisitData(); |
|
593
|
|
|
} |
|
594
|
|
|
|
|
595
|
|
|
/** |
|
596
|
|
|
* Get the final target lesion for this visit |
|
597
|
|
|
*/ |
|
598
|
|
|
public function getReviewTargetLesionsArray() { |
|
599
|
|
|
return $this->reviewTargetLesions !=null ? json_decode($this->reviewTargetLesions, true) : null; |
|
600
|
|
|
} |
|
601
|
|
|
|
|
602
|
|
|
/** |
|
603
|
|
|
* Return the object sepecific instance for this visit to manage users form data |
|
604
|
|
|
* @param boolean $local |
|
605
|
|
|
* @param string $username |
|
606
|
|
|
* @return Form_Processor |
|
607
|
|
|
*/ |
|
608
|
|
|
public function getFromProcessor(bool $local, string $username) { |
|
609
|
|
|
//Destination of the specific post processing POO |
|
610
|
|
|
$modality=$this->visitGroupObject->groupModality; |
|
611
|
|
|
$specificObjectFile=$_SERVER["DOCUMENT_ROOT"].'/data/form/'.$this->study.'/Poo/'.$modality."_".$this->study."_".$this->visitType.".php"; |
|
612
|
|
|
|
|
613
|
|
|
$formProcessor=null; |
|
|
|
|
|
|
614
|
|
|
|
|
615
|
|
|
if (is_file($specificObjectFile)) { |
|
616
|
|
|
require_once($specificObjectFile); |
|
617
|
|
|
$objectName=$modality."_".$this->study."_".$this->visitType; |
|
618
|
|
|
$formProcessor=new $objectName($this, $local, $username, $this->linkpdo); |
|
619
|
|
|
}else { |
|
620
|
|
|
throw new Exception('Missing From Processor for this visit'); |
|
621
|
|
|
} |
|
622
|
|
|
|
|
623
|
|
|
return $formProcessor; |
|
624
|
|
|
|
|
625
|
|
|
} |
|
626
|
|
|
|
|
627
|
|
|
/** |
|
628
|
|
|
* Send uploaded confirmation to supervisors and uploader |
|
629
|
|
|
* will send email only if uploaded dicom and local form done and QC Not Done |
|
630
|
|
|
* @param string $username |
|
631
|
|
|
* @return boolean |
|
632
|
|
|
*/ |
|
633
|
|
|
private function sendUploadedVisitEmailToController(?string $username) { |
|
634
|
|
|
|
|
635
|
|
|
if ($this->uploadStatus == Visit::DONE |
|
636
|
|
|
&& $this->stateInvestigatorForm == Visit::DONE |
|
637
|
|
|
&& $this->stateQualityControl == Visit::NOT_DONE) { |
|
638
|
|
|
//Inform Controllers that Visit is uploaded and awaiting QC |
|
639
|
|
|
$emailObject=new Send_Email($this->linkpdo); |
|
640
|
|
|
$emailObject->addGroupEmails($this->study, User::CONTROLLER) |
|
641
|
|
|
->addGroupEmails($this->study, User::MONITOR) |
|
642
|
|
|
->addGroupEmails($this->study, User::SUPERVISOR); |
|
643
|
|
|
|
|
644
|
|
|
if ($username != null) { |
|
|
|
|
|
|
645
|
|
|
$emailObject->addEmail($emailObject->getUserEmails($username)); |
|
646
|
|
|
} |
|
647
|
|
|
$emailObject->sendUploadedVisitMessage($this->study, $this->patientCode, $this->visitType); |
|
648
|
|
|
|
|
649
|
|
|
return true; |
|
650
|
|
|
|
|
651
|
|
|
}else { |
|
652
|
|
|
return false; |
|
653
|
|
|
} |
|
654
|
|
|
} |
|
655
|
|
|
|
|
656
|
|
|
/** |
|
657
|
|
|
* Send emails to reviewers saying the visit is available for review |
|
658
|
|
|
*/ |
|
659
|
|
|
private function sendAvailableReviewMail() { |
|
660
|
|
|
$emailObject=new Send_Email($this->linkpdo); |
|
661
|
|
|
$emailObject->addEmailsReviewerWithNoReview($this->study, $this->id_visit); |
|
662
|
|
|
$emailObject->sendReviewReadyMessage($this->study, $this->patientCode, $this->visitType); |
|
663
|
|
|
} |
|
664
|
|
|
|
|
665
|
|
|
/** |
|
666
|
|
|
* Send emails to supervisors when visit recieved and QC done and does not need review process |
|
667
|
|
|
*/ |
|
668
|
|
|
private function sendUploadNotificationToSupervisor() { |
|
669
|
|
|
$emailObject=new Send_Email($this->linkpdo); |
|
670
|
|
|
$emailObject->addGroupEmails($this->study, User::SUPERVISOR); |
|
671
|
|
|
$emailObject->sendUploadedVisitMessage($this->study, $this->patientCode, $this->visitType); |
|
672
|
|
|
} |
|
673
|
|
|
|
|
674
|
|
|
/** |
|
675
|
|
|
* Return study object associated with this visit |
|
676
|
|
|
* @return Study |
|
677
|
|
|
*/ |
|
678
|
|
|
public function getParentStudyObject() { |
|
679
|
|
|
return new Study($this->study, $this->linkpdo); |
|
680
|
|
|
} |
|
681
|
|
|
|
|
682
|
|
|
/** |
|
683
|
|
|
* Return if the review is awaiting a review form for a specific reviewer |
|
684
|
|
|
* @param string $username |
|
685
|
|
|
* @return boolean |
|
686
|
|
|
*/ |
|
687
|
|
|
public function isAwaitingReviewForReviewerUser(string $username) { |
|
688
|
|
|
|
|
689
|
|
|
try { |
|
690
|
|
|
$reviewObject=$this->queryExistingReviewForReviewer($username); |
|
691
|
|
|
}catch (Exception $e) { |
|
692
|
|
|
//User does not have any review, so visit still awaiting it's review |
|
693
|
|
|
return true; |
|
694
|
|
|
} |
|
695
|
|
|
|
|
696
|
|
|
//If found look at validation status. |
|
697
|
|
|
//not awaiting review if form already validated |
|
698
|
|
|
if ($reviewObject->validated) { |
|
699
|
|
|
return false; |
|
700
|
|
|
}else { |
|
701
|
|
|
return true; |
|
702
|
|
|
} |
|
703
|
|
|
|
|
704
|
|
|
|
|
705
|
|
|
} |
|
706
|
|
|
|
|
707
|
|
|
/** |
|
708
|
|
|
* Create a new visit |
|
709
|
|
|
* @param $visitName |
|
710
|
|
|
* @param $study |
|
711
|
|
|
* @param $patientCode |
|
712
|
|
|
* @param $statusDone |
|
713
|
|
|
* @param $reasonNotDone |
|
714
|
|
|
* @param $acquisitionDate |
|
715
|
|
|
* @param $username |
|
716
|
|
|
* @param $linkpdo |
|
717
|
|
|
* @return string |
|
718
|
|
|
*/ |
|
719
|
|
|
public static function createVisit($visitName, $visitGroupId, $patientCode, $statusDone, $reasonNotDone, $acquisitionDate, $username, PDO $linkpdo) { |
|
720
|
|
|
|
|
721
|
|
|
$visitType=Visit_Type::getVisitTypeByName($visitGroupId, $visitName, $linkpdo); |
|
722
|
|
|
|
|
723
|
|
|
//Add visit verifying that this visit doesn't already have an active visite registered |
|
724
|
|
|
$insertion=$linkpdo->prepare('INSERT INTO visits(visit_type_id, status_done, patient_code, reason_for_not_done, acquisition_date, creator_name, creation_date) |
|
725
|
|
|
SELECT :visitTypeId, :status_done, :patient_code, :reason, :acquisition_date, :creator_name, :creation_date FROM DUAL |
|
726
|
|
|
WHERE NOT EXISTS (SELECT id_visit FROM visits WHERE patient_code=:patient_code AND visit_type_id=:visitTypeId AND deleted=0) ' ); |
|
727
|
|
|
|
|
728
|
|
|
$insertion->execute(array( |
|
729
|
|
|
'visitTypeId'=>$visitType->id, |
|
730
|
|
|
'status_done' => $statusDone, |
|
731
|
|
|
'patient_code' => $patientCode, |
|
732
|
|
|
'reason' => $reasonNotDone, |
|
733
|
|
|
'acquisition_date' => $acquisitionDate, |
|
734
|
|
|
'creator_name' => $username, |
|
735
|
|
|
'creation_date' => date("Y-m-d H:i:s") |
|
736
|
|
|
)); |
|
737
|
|
|
|
|
738
|
|
|
$createdId=$linkpdo->lastInsertId(); |
|
739
|
|
|
|
|
740
|
|
|
return new Visit($createdId, $linkpdo); |
|
|
|
|
|
|
741
|
|
|
} |
|
742
|
|
|
|
|
743
|
|
|
} |