ClinicalDocument::getReferenceManager() - Code Metrics - Inspection of "trying to publish to packagist, with no access to..." - pgee70/cda - Measure and Improve Code Quality continuously with Scrutinizer

Passed

Push — master ( 26e0e4...4a85b9 )

by Peter

created 2018-08-31 11:09 UTC

ClinicalDocument::getReferenceManager() A

↳ Parent: ClinicalDocument

Complexity

Conditions	1
Paths	1

Size

Total Lines	3
Code Lines	1

Duplication

Lines	0
Ratio	0 %

Importance

Changes

Metric	Value
eloc	1
dl	0
loc	3
rs	10
c	0
b	0
f	0
cc	1
nc	1
nop	0

<?php

/**
 * The MIT License
 *
 * Copyright 2016 Julien Fastré <[email protected]>.
 *
 * Permission is hereby granted, free of charge, to any person obtaining a copy
 * of this software and associated documentation files (the "Software"), to deal
 * in the Software without restriction, including without limitation the rights
 * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 * copies of the Software, and to permit persons to whom the Software is
 * furnished to do so, subject to the following conditions:
 *
 * The above copyright notice and this permission notice shall be included in
 * all copies or substantial portions of the Software.
 *
 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE AND NON INFRINGEMENT. IN NO EVENT SHALL THE
 * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 * THE SOFTWARE.
 */

namespace i3Soft\CDA;

use i3Soft\CDA\DataType\Identifier\InstanceIdentifier;
use i3Soft\CDA\Elements\TypeId;
use i3Soft\CDA\Helper\ReferenceManager;
use i3Soft\CDA\Interfaces\ClassCodeInterface;
use i3Soft\CDA\Interfaces\MoodCodeInterface;
use i3Soft\CDA\Traits\AuthenticatorTrait;
use i3Soft\CDA\Traits\AuthorizationTrait;
use i3Soft\CDA\Traits\AuthorsTrait;
use i3Soft\CDA\Traits\ClassCodeTrait;
use i3Soft\CDA\Traits\CodeTrait;
use i3Soft\CDA\Traits\CompletionCodeTrait;
use i3Soft\CDA\Traits\ConfidentialityCodeTrait;
use i3Soft\CDA\Traits\CopyTimeTrait;
use i3Soft\CDA\Traits\CustodianTrait;
use i3Soft\CDA\Traits\DataEntererTrait;
use i3Soft\CDA\Traits\DocumentationOfsTrait;
use i3Soft\CDA\Traits\EffectiveTimeTrait;
use i3Soft\CDA\Traits\IdTrait;
use i3Soft\CDA\Traits\InformantsTrait;
use i3Soft\CDA\Traits\InformationRecipientsTrait;
use i3Soft\CDA\Traits\LanguageCodeTrait;
use i3Soft\CDA\Traits\LegalAuthenticatorTrait;
use i3Soft\CDA\Traits\MoodCodeTrait;
use i3Soft\CDA\Traits\ParticipantsTrait;
use i3Soft\CDA\Traits\RealmCodesTrait;
use i3Soft\CDA\Traits\RecordTargetsTrait;
use i3Soft\CDA\Traits\SetIdTrait;
use i3Soft\CDA\Traits\TemplateIdsTrait;
use i3Soft\CDA\Traits\TitleTrait;
use i3Soft\CDA\Traits\TypeIdTrait;
use i3Soft\CDA\Traits\VersionNumberTrait;

/**
 * Root class for clinical document
 *
 * @author Julien Fastré <[email protected]>
 * @author Peter Gee <https://github.com/pgee70>
 */
class ClinicalDocument implements ClassCodeInterface, MoodCodeInterface
{
    const NS_CDA     = '';
    const NS_CDA_URI = 'urn:hl7-org:v3';
    const NS_XSI_URI = 'http://www.w3.org/2001/XMLSchema-instance';

    use RealmCodesTrait;
    use TypeIdTrait;
    use TemplateIdsTrait;
    use IdTrait;
    use CodeTrait;
    use TitleTrait;
    use EffectiveTimeTrait;
    use ConfidentialityCodeTrait;
    use LanguageCodeTrait;
    use SetIdTrait;
    use VersionNumberTrait;
    use CompletionCodeTrait;
    use CopyTimeTrait;
    use RecordTargetsTrait;
    use AuthorsTrait;
    use DataEntererTrait;
    use InformantsTrait;
    use CustodianTrait;
    use InformationRecipientsTrait;
    use legalAuthenticatorTrait;
    use AuthenticatorTrait;
    use ParticipantsTrait;
    // use InFulfillmentOfsTrait;
    use DocumentationOfsTrait;
    // use RelatedDocumentsTrait;
    use AuthorizationTrait;

    // use ComponentOfTrait;
    // use ComponentTrait;
    use ClassCodeTrait;
    use MoodCodeTrait;

    /**
     * Refeger assigned to this document  *
     *
     * @var ReferenceManager
     */
    private $referenceManager;
    /**
     * the root component
     *
     * @var Component\RootBodyComponent
     */
    private $rootComponent;
    private $informationRecipient;

    private $inFulfillmentOf;

    private $documentationOf;

    private $relatedDocument;


    /**
     * ClinicalDocument constructor.
     */
    public function __construct()
    {
        $this->rootComponent    = new Component\RootBodyComponent();
        $this->referenceManager = new ReferenceManager();
        $this->setTypeId(new TypeId(new InstanceIdentifier('2.16.840.1.113883.1.3', 'POCD_HD000040')))
          ->setAcceptableClassCodes(['', ClassCodeInterface::CLINICAL_DOCUMENT])
          ->setClassCode('')
          ->setAcceptableMoodCodes(['', MoodCodeInterface::EVENT])
          ->setMoodCode('');
    }

    /**
     *
     * @return ReferenceManager
     */
    public function getReferenceManager(): ReferenceManager
    {
        return $this->referenceManager;
    }


    /**
     *
     * @param \DOMDocument|null $doc
     *
     * @return \DOMDocument
     */
    public function toDOMDocument(\DOMDocument $doc = null): \DOMDocument
    {
        $doc = $doc ?? new \DOMDocument('1.0', 'UTF-8');
        $el  = $doc->createElementNS(self::NS_CDA_URI, 'ClinicalDocument');
        $doc->appendChild($el);
        // set the NS
        $el->setAttributeNS(
          self::NS_XSI_URI,
          'xsi:schemaLocation',
          'CDA-ES-V1_3.xsd'
        );
        $el->setAttribute('xmlns:ext', 'http://ns.electronichealth.net.au/Ci/Cda/Extensions/3.0');
        $el->setAttribute('xmlns:xs', 'http://www.w3.org/2001/XMLSchema');
        if ($this->hasClassCode()) {
            $el->setAttribute('classCode', $this->getClassCode());
        }
        if ($this->hasMoodCode()) {
            $el->setAttribute('moodCode', $this->getMoodCode());
        }
        $this->renderRealmCodes($el, $doc)
          ->renderTypeId($el, $doc)
          ->renderTemplateIds($el, $doc)
          ->renderId($el, $doc)
          ->renderCode($el, $doc)
          ->renderTitle($el, $doc)
          ->renderEffectiveTime($el, $doc)
          ->renderConfidentialityCode($el, $doc)
          ->renderLanguageCode($el, $doc)
          ->renderSetId($el, $doc)
          ->renderVersionNumber($el, $doc)
          ->renderCopyTime($el, $doc)
          ->renderCompletionCode($el, $doc)
          ->renderRecordTargets($el, $doc)
          ->renderAuthors($el, $doc)
          ->renderDataEnter($el, $doc)
          ->renderInformants($el, $doc)
          ->renderCustodian($el, $doc)
          ->renderInformationRecipients($el, $doc)
          ->renderLegalAuthenticator($el, $doc)
          ->renderAuthenticator($el, $doc)
          ->renderParticipants($el, $doc)
          // todo inFulfillmentOf
          ->renderDocumentationOfs($el, $doc)
          // todo relatedDocument
          ->renderAuthorization($el, $doc);
        // todo componentOf
        // add components
        if (false === $this->getRootComponent()->isEmpty()) {
            $el->appendChild($this->getRootComponent()->toDOMElement($doc));
        }
        return $doc;
    }

    /**
     *
     * @return Component\RootBodyComponent
     */
    public function getRootComponent(): Component\RootBodyComponent
    {
        return $this->rootComponent;
    }

}


1			<?php
2
3			/**
4			* The MIT License
5			*
6			* Copyright 2016 Julien Fastré <[email protected]>.
7			*
8			* Permission is hereby granted, free of charge, to any person obtaining a copy
9			* of this software and associated documentation files (the "Software"), to deal
10			* in the Software without restriction, including without limitation the rights
11			* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
12			* copies of the Software, and to permit persons to whom the Software is
13			* furnished to do so, subject to the following conditions:
14			*
15			* The above copyright notice and this permission notice shall be included in
16			* all copies or substantial portions of the Software.
17			*
18			* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
19			* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
20			* FITNESS FOR A PARTICULAR PURPOSE AND NON INFRINGEMENT. IN NO EVENT SHALL THE
21			* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
22			* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
23			* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
24			* THE SOFTWARE.
25			*/
26
27			namespace i3Soft\CDA;
28
29			use i3Soft\CDA\DataType\Identifier\InstanceIdentifier;
30			use i3Soft\CDA\Elements\TypeId;
31			use i3Soft\CDA\Helper\ReferenceManager;
32			use i3Soft\CDA\Interfaces\ClassCodeInterface;
33			use i3Soft\CDA\Interfaces\MoodCodeInterface;
34			use i3Soft\CDA\Traits\AuthenticatorTrait;
35			use i3Soft\CDA\Traits\AuthorizationTrait;
36			use i3Soft\CDA\Traits\AuthorsTrait;
37			use i3Soft\CDA\Traits\ClassCodeTrait;
38			use i3Soft\CDA\Traits\CodeTrait;
39			use i3Soft\CDA\Traits\CompletionCodeTrait;
40			use i3Soft\CDA\Traits\ConfidentialityCodeTrait;
41			use i3Soft\CDA\Traits\CopyTimeTrait;
42			use i3Soft\CDA\Traits\CustodianTrait;
43			use i3Soft\CDA\Traits\DataEntererTrait;
44			use i3Soft\CDA\Traits\DocumentationOfsTrait;
45			use i3Soft\CDA\Traits\EffectiveTimeTrait;
46			use i3Soft\CDA\Traits\IdTrait;
47			use i3Soft\CDA\Traits\InformantsTrait;
48			use i3Soft\CDA\Traits\InformationRecipientsTrait;
49			use i3Soft\CDA\Traits\LanguageCodeTrait;
50			use i3Soft\CDA\Traits\LegalAuthenticatorTrait;
51			use i3Soft\CDA\Traits\MoodCodeTrait;
52			use i3Soft\CDA\Traits\ParticipantsTrait;
53			use i3Soft\CDA\Traits\RealmCodesTrait;
54			use i3Soft\CDA\Traits\RecordTargetsTrait;
55			use i3Soft\CDA\Traits\SetIdTrait;
56			use i3Soft\CDA\Traits\TemplateIdsTrait;
57			use i3Soft\CDA\Traits\TitleTrait;
58			use i3Soft\CDA\Traits\TypeIdTrait;
59			use i3Soft\CDA\Traits\VersionNumberTrait;
60
61			/**
62			* Root class for clinical document
63			*
64			* @author Julien Fastré <[email protected]>
65			* @author Peter Gee <https://github.com/pgee70>
66			*/
67			class ClinicalDocument implements ClassCodeInterface, MoodCodeInterface
68			{
69			const NS_CDA = '';
70			const NS_CDA_URI = 'urn:hl7-org:v3';
71			const NS_XSI_URI = 'http://www.w3.org/2001/XMLSchema-instance';
72
73			use RealmCodesTrait;
74			use TypeIdTrait;
75			use TemplateIdsTrait;
76			use IdTrait;
77			use CodeTrait;
78			use TitleTrait;
79			use EffectiveTimeTrait;
80			use ConfidentialityCodeTrait;
81			use LanguageCodeTrait;
82			use SetIdTrait;
83			use VersionNumberTrait;
84			use CompletionCodeTrait;
85			use CopyTimeTrait;
86			use RecordTargetsTrait;
87			use AuthorsTrait;
88			use DataEntererTrait;
89			use InformantsTrait;
90			use CustodianTrait;
91			use InformationRecipientsTrait;
92			use legalAuthenticatorTrait;
93			use AuthenticatorTrait;
94			use ParticipantsTrait;
95			// use InFulfillmentOfsTrait;
96			use DocumentationOfsTrait;
97			// use RelatedDocumentsTrait;
98			use AuthorizationTrait;
99
100			// use ComponentOfTrait;
101			// use ComponentTrait;
102			use ClassCodeTrait;
103			use MoodCodeTrait;
104
105			/**
106			* Refeger assigned to this document *
107			*
108			* @var ReferenceManager
109			*/
110			private $referenceManager;
111			/**
112			* the root component
113			*
114			* @var Component\RootBodyComponent
115			*/
116			private $rootComponent;
117			private $informationRecipient;
			0 ignored issues – show introduced 2018-08-28 13:17 UTC by Report Bug Copy Issue Report The private property `$informationRecipient` is not used, and could be removed. Loading history...
118			private $inFulfillmentOf;
			0 ignored issues – show introduced 2018-08-28 13:17 UTC by Report Bug Copy Issue Report The private property `$inFulfillmentOf` is not used, and could be removed. Loading history...
119			private $documentationOf;
			0 ignored issues – show introduced 2018-08-28 13:17 UTC by Report Bug Copy Issue Report The private property `$documentationOf` is not used, and could be removed. Loading history...
120			private $relatedDocument;
			0 ignored issues – show introduced 2018-08-28 13:17 UTC by Report Bug Copy Issue Report The private property `$relatedDocument` is not used, and could be removed. Loading history...
121
122			/**
123			* ClinicalDocument constructor.
124			*/
125			public function __construct()
126			{
127			$this->rootComponent = new Component\RootBodyComponent();
128			$this->referenceManager = new ReferenceManager();
129			$this->setTypeId(new TypeId(new InstanceIdentifier('2.16.840.1.113883.1.3', 'POCD_HD000040')))
130			->setAcceptableClassCodes(['', ClassCodeInterface::CLINICAL_DOCUMENT])
131			->setClassCode('')
132			->setAcceptableMoodCodes(['', MoodCodeInterface::EVENT])
133			->setMoodCode('');
134			}
135
136			/**
137			*
138			* @return ReferenceManager
139			*/
140			public function getReferenceManager(): ReferenceManager
141			{
142			return $this->referenceManager;
143			}
144
145
146			/**
147			*
148			* @param \DOMDocument\|null $doc
149			*
150			* @return \DOMDocument
151			*/
152			public function toDOMDocument(\DOMDocument $doc = null): \DOMDocument
153			{
154			$doc = $doc ?? new \DOMDocument('1.0', 'UTF-8');
155			$el = $doc->createElementNS(self::NS_CDA_URI, 'ClinicalDocument');
156			$doc->appendChild($el);
157			// set the NS
158			$el->setAttributeNS(
159			self::NS_XSI_URI,
160			'xsi:schemaLocation',
161			'CDA-ES-V1_3.xsd'
162			);
163			$el->setAttribute('xmlns:ext', 'http://ns.electronichealth.net.au/Ci/Cda/Extensions/3.0');
164			$el->setAttribute('xmlns:xs', 'http://www.w3.org/2001/XMLSchema');
165			if ($this->hasClassCode()) {
166			$el->setAttribute('classCode', $this->getClassCode());
167			}
168			if ($this->hasMoodCode()) {
169			$el->setAttribute('moodCode', $this->getMoodCode());
170			}
171			$this->renderRealmCodes($el, $doc)
172			->renderTypeId($el, $doc)
173			->renderTemplateIds($el, $doc)
174			->renderId($el, $doc)
175			->renderCode($el, $doc)
176			->renderTitle($el, $doc)
177			->renderEffectiveTime($el, $doc)
178			->renderConfidentialityCode($el, $doc)
179			->renderLanguageCode($el, $doc)
180			->renderSetId($el, $doc)
181			->renderVersionNumber($el, $doc)
182			->renderCopyTime($el, $doc)
183			->renderCompletionCode($el, $doc)
184			->renderRecordTargets($el, $doc)
185			->renderAuthors($el, $doc)
186			->renderDataEnter($el, $doc)
187			->renderInformants($el, $doc)
188			->renderCustodian($el, $doc)
189			->renderInformationRecipients($el, $doc)
190			->renderLegalAuthenticator($el, $doc)
191			->renderAuthenticator($el, $doc)
192			->renderParticipants($el, $doc)
193			// todo inFulfillmentOf
194			->renderDocumentationOfs($el, $doc)
195			// todo relatedDocument
196			->renderAuthorization($el, $doc);
197			// todo componentOf
198			// add components
199			if (false === $this->getRootComponent()->isEmpty()) {
200			$el->appendChild($this->getRootComponent()->toDOMElement($doc));
201			}
202			return $doc;
203			}
204
205			/**
206			*
207			* @return Component\RootBodyComponent
208			*/
209			public function getRootComponent(): Component\RootBodyComponent
210			{
211			return $this->rootComponent;
212			}
213
214			}
215

pgee70 / cda

Push — master ( 26e0e4...4a85b9 )

ClinicalDocument::getReferenceManager() A

Complexity

Size

Duplication

Importance

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