mmagnus / rna-tools

    print(out)

cmd.extend('rpr', rpr)

def diff(selection, selection2):

    """rpr"""

    f = tempfile.NamedTemporaryFile(delete=False)

    input = os.path.dirname(f.name) + os.sep +  selection + '.pdb'

    cmd.save(input, selection)

    output = os.path.dirname(f.name) + os.sep +  selection2 + '.pdb'

    cmd.save(input, selection)

    cmdline = 'diffpdb.py ' + input + ' ' + output + ' &'

    print(cmdline)

    #os.system(cmdline)

    exe(cmdline)

cmd.extend('diff', diff)

cmd.extend('ll', ll)

print('ll - show lines only')

def rpr(selection):

    """rpr"""

    f = tempfile.NamedTemporaryFile(delete=False)

    input = os.path.dirname(f.name) + os.sep +  selection + '.pdb'

    cmd.save(input, selection)

    output = os.path.dirname(f.name) + os.sep +  selection + '_rpr.pdb'

    out, err = exe('rna_pdb_tools.py --rpr ' + input + ' > ' + output)

    cmd.load(output)

    print(out)

cmd.extend('rpr', rpr)

def diff(selection, selection2):