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<?php |
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/** |
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* webtrees-lib: MyArtJaub library for webtrees |
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* |
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* @package MyArtJaub\Webtrees |
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* @subpackage Sosa |
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* @author Jonathan Jaubart <[email protected]> |
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* @copyright Copyright (c) 2009-2016, Jonathan Jaubart |
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* @license http://www.gnu.org/licenses/gpl.html GNU General Public License, version 3 |
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*/ |
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namespace MyArtJaub\Webtrees\Module\Sosa\Model; |
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use Fisharebest\Webtrees\Tree; |
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use Fisharebest\Webtrees\User; |
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use Fisharebest\Webtrees\Database; |
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use MyArtJaub\Webtrees\Functions\Functions; |
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use Fisharebest\Webtrees\Auth; |
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use Fisharebest\Webtrees\Individual; |
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/** |
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* Provide Sosa data access |
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*/ |
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class SosaProvider { |
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/** |
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* Maximum number of generation the database is able to hold. |
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* @var int MAX_DB_GENERATIONS |
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*/ |
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const MAX_DB_GENERATIONS = 64; |
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/** |
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* System's default user (ID -1 in the database |
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* @var User $default_user |
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*/ |
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protected static $default_user; |
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/** |
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* Reference user |
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* @var User $user |
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*/ |
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protected $user; |
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/** |
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* Reference tree |
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* @var Tree $tree |
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*/ |
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protected $tree; |
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/** |
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* Cached list of Sosa Individuals by generation |
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* Format: key = generation, value = array ( sosa => Individual ID) |
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* @var array $sosa_list_by_gen |
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*/ |
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protected $sosa_list_by_gen; |
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/** |
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* Cached list of Sosa Families by generation |
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* Format: key = generation, value = array ( sosa => Family ID) |
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* @var unknown $sosa_fam_list_by_gen |
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*/ |
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protected $sosa_fam_list_by_gen; |
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/** |
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* Cached array of statistics by generation |
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* Format: key = generation, |
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* value = array( |
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* sosaCount, sosaTotalCount, diffSosaTotalCount, firstBirth, lastBirth, avgBirth |
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* ) |
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* @var array $statistics_tab |
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*/ |
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protected $statistics_tab; |
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/** |
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* Has the provider's initialisation completed |
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* @var bool $is_setup |
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*/ |
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protected $is_setup; |
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/** |
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* Constructor for Sosa Provider. |
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* A provider is defined in relation to a specific tree and reference user. |
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* |
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* @param Tree $tree |
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* @param User $user |
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*/ |
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public function __construct(Tree $tree, User $user = null) { |
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if(self::$default_user === null) |
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self::$default_user = User::find(-1); |
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$this->tree = $tree; |
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$this->user = $user; |
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$this->is_setup = true; |
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if($this->user === null) $this->user = Auth::user(); |
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if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
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// Check if the user, or the default user, has a root already setup; |
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if(empty($this->getRootIndiId())) { |
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if($this->user == self::$default_user) { // If the default user is not setup |
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$this->is_setup = false; |
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} |
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else { |
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$this->user = self::$default_user; |
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$this->is_setup = $this->getRootIndiId() === null; |
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} |
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} |
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} |
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/** |
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* Returns is the Provider has been successfully set up |
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* @return bool |
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*/ |
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public function isSetup() { |
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return $this->is_setup; |
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} |
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/** |
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* Return the root individual ID for the reference tree and user. |
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* @return string Individual ID |
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*/ |
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public function getRootIndiId() { |
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return $this->tree->getUserPreference($this->user, 'MAJ_SOSA_ROOT_ID'); |
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} |
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/** |
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* Return the root individual for the reference tree and user. |
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* @return Individual Individual |
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*/ |
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public function getRootIndi() { |
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$root_indi_id = $this->getRootIndiId(); |
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if(!empty($root_indi_id)) { |
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return Individual::getInstance($root_indi_id, $this->tree); |
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} |
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return null; |
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} |
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/***************** |
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* DATA CRUD LAYER |
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*****************/ |
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/** |
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* Remove all Sosa entries related to the gedcom file and user |
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*/ |
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public function deleteAll() { |
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if(!$this->is_setup) return; |
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Database::prepare( |
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'DELETE FROM `##maj_sosa`'. |
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' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
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->execute(array( |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId() |
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)); |
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} |
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/** |
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* Remove all ancestors of a sosa number |
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* |
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* @param int $sosa |
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*/ |
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public function deleteAncestors($sosa) { |
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if(!$this->is_setup) return; |
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$gen = Functions::getGeneration($sosa); |
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Database::prepare( |
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'DELETE FROM `##maj_sosa`'. |
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' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
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' AND majs_gen >= :gen' . |
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' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
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)->execute(array( |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId(), |
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'gen' => $gen, |
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'sosa' => $sosa |
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)); |
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} |
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/** |
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* Insert (or update if already existing) a list of Sosa individuals |
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* @param array $sosa_records |
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*/ |
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public function insertOrUpdate($sosa_records) { |
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if(!$this->is_setup) return; |
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$treeid = $this->tree->getTreeId(); |
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$userid = $this->user->getUserId(); |
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$questionmarks_table = array(); |
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$values_table = array(); |
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$i = 0; |
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foreach ($sosa_records as $row) { |
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$gen = Functions::getGeneration($row['sosa']); |
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if($gen <= self::MAX_DB_GENERATIONS) { |
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$questionmarks_table[] = |
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'(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :dyear'.$i.')'; |
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$values_table = array_merge( |
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$values_table, |
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array( |
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'tree_id'.$i => $treeid, |
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'user_id'.$i => $userid, |
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'sosa'.$i => $row['sosa'], |
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'indi_id'.$i => $row['indi'], |
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'gen'.$i => Functions::getGeneration($row['sosa']), |
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'byear'.$i => $row['birth_year'], |
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'dyear'.$i => $row['death_year'] |
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) |
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); |
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} |
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$i++; |
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} |
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$sql = 'REPLACE INTO `##maj_sosa`' . |
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' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_death_year)' . |
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' VALUES '. implode(',', $questionmarks_table); |
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Database::prepare($sql)->execute($values_table); |
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} |
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/**************** |
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* SIMPLE QUERIES |
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****************/ |
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/** |
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* Returns the list of Sosa numbers to which an individual is related. |
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* Format: key = sosa number, value = generation for the Sosa number |
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* |
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* @param Individual $indi |
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* @return array Array of sosa numbers |
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*/ |
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public function getSosaNumbers(Individual $indi) { |
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if(!$this->is_setup) return array(); |
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return Database::prepare( |
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'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
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' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
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)->execute(array( |
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'indi_id' => $indi->getXref(), |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId() |
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))->fetchAssoc(); |
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} |
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/** |
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* Get the last generation of Sosa ancestors |
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* |
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* @return number Last generation if found, 1 otherwise |
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*/ |
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public function getLastGeneration() { |
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if(!$this->is_setup) return; |
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return Database::prepare( |
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'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
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' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
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)->execute(array( |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId() |
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))->fetchOne() ?: 1; |
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} |
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/************* |
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* SOSA LISTS |
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*************/ |
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/** |
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* Return the list of all sosas, with the generations it belongs to |
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* |
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* @return array Associative array of Sosa ancestors, with their generation, comma separated |
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*/ |
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public function getAllSosaWithGenerations(){ |
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if(!$this->is_setup) return array(); |
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return Database::prepare( |
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'SELECT majs_i_id AS indi,' . |
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' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
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' FROM `##maj_sosa`' . |
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' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
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' GROUP BY majs_i_id' |
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)->execute(array( |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId() |
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))->fetchAssoc(); |
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} |
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/** |
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* Get an associative array of Sosa individuals in generation G. Keys are Sosa numbers, values individuals. |
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* |
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* @param number $gen Generation |
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* @return array Array of Sosa individuals |
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*/ |
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public function getSosaListAtGeneration($gen){ |
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if(!$this->is_setup) return array(); |
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if(!$this->sosa_list_by_gen) |
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$this->sosa_list_by_gen = array(); |
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if($gen){ |
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if(!isset($this->sosa_list_by_gen[$gen])){ |
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$this->sosa_list_by_gen[$gen] = Database::prepare( |
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'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
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' FROM `##maj_sosa`'. |
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' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
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' AND majs_gen = :gen'. |
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' ORDER BY majs_sosa ASC') |
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->execute(array( |
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'tree_id' => $this->tree->getTreeId(), |
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'user_id' => $this->user->getUserId(), |
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'gen' => $gen |
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)) |
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->fetchAssoc(); |
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} |
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return $this->sosa_list_by_gen[$gen]; |
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} |
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return array(); |
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} |
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/** |
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* Get an associative array of Sosa families in generation G. Keys are Sosa numbers for the husband, values families. |
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* |
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* @param number $gen Generation |
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* @return array Array of Sosa families |
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*/ |
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public function getFamilySosaListAtGeneration($gen){ |
|
315
|
|
|
if(!$this->is_setup) return array(); |
|
316
|
|
|
if(!$this->sosa_fam_list_by_gen) |
|
317
|
|
|
$this->sosa_fam_list_by_gen = array(); |
|
|
|
|
|
|
318
|
|
|
|
|
319
|
|
|
if($gen){ |
|
320
|
|
|
if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
321
|
|
|
$this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
|
322
|
|
|
'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
|
323
|
|
|
' FROM `##families`'. |
|
324
|
|
|
' INNER JOIN `##maj_sosa` AS s1 ON (`##families`.f_husb = s1.majs_i_id AND `##families`.f_file = s1.majs_gedcom_id)'. |
|
325
|
|
|
' INNER JOIN `##maj_sosa` AS s2 ON (`##families`.f_wife = s2.majs_i_id AND `##families`.f_file = s2.majs_gedcom_id)'. |
|
326
|
|
|
' WHERE s1.majs_sosa + 1 = s2.majs_sosa'. |
|
327
|
|
|
' AND s1.majs_gedcom_id= :tree_id AND s1.majs_user_id=:user_id'. |
|
328
|
|
|
' AND s2.majs_gedcom_id= :tree_id AND s2.majs_user_id=:user_id'. |
|
329
|
|
|
' AND s1.majs_gen = :gen'. |
|
330
|
|
|
' ORDER BY s1.majs_sosa ASC' |
|
331
|
|
|
) |
|
332
|
|
|
->execute(array( |
|
333
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
334
|
|
|
'user_id' => $this->user->getUserId(), |
|
335
|
|
|
'gen' => $gen |
|
336
|
|
|
)) |
|
337
|
|
|
->fetchAssoc(); |
|
338
|
|
|
} |
|
339
|
|
|
return $this->sosa_fam_list_by_gen[$gen]; |
|
340
|
|
|
} |
|
341
|
|
|
return array(); |
|
342
|
|
|
} |
|
343
|
|
|
|
|
344
|
|
|
/** |
|
345
|
|
|
* Get an associative array of Sosa individuals in generation G who are missing parents. Keys are Sosa numbers, values individuals. |
|
346
|
|
|
* |
|
347
|
|
|
* @param number $gen Generation |
|
348
|
|
|
* @return array Array of Sosa individuals |
|
349
|
|
|
*/ |
|
350
|
|
|
public function getMissingSosaListAtGeneration($gen){ |
|
351
|
|
|
if(!$this->is_setup) return array(); |
|
352
|
|
|
if($gen){ |
|
353
|
|
|
return $this->sosa_list_by_gen[$gen] = Database::prepare( |
|
354
|
|
|
'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
|
355
|
|
|
' FROM `##maj_sosa` schild'. |
|
356
|
|
|
' LEFT JOIN `##maj_sosa` sfat ON ((schild.majs_sosa * 2) = sfat.majs_sosa AND schild.majs_gedcom_id = sfat.majs_gedcom_id AND schild.majs_user_id = sfat.majs_user_id)'. |
|
357
|
|
|
' LEFT JOIN `##maj_sosa` smot ON ((schild.majs_sosa * 2 + 1) = smot.majs_sosa AND schild.majs_gedcom_id = smot.majs_gedcom_id AND schild.majs_user_id = smot.majs_user_id)'. |
|
358
|
|
|
' WHERE schild.majs_gedcom_id = :tree_id AND schild.majs_user_id = :user_id'. |
|
359
|
|
|
' AND schild.majs_gen = :gen'. |
|
360
|
|
|
' AND (sfat.majs_sosa IS NULL OR smot.majs_sosa IS NULL)'. |
|
361
|
|
|
' ORDER BY schild.majs_sosa ASC') |
|
362
|
|
|
->execute(array( |
|
363
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
364
|
|
|
'user_id' => $this->user->getUserId(), |
|
365
|
|
|
'gen' => $gen - 1 |
|
366
|
|
|
))->fetchAll(\PDO::FETCH_ASSOC); |
|
367
|
|
|
} |
|
368
|
|
|
return array(); |
|
369
|
|
|
} |
|
370
|
|
|
|
|
371
|
|
|
|
|
372
|
|
|
|
|
373
|
|
|
/************* |
|
374
|
|
|
* STATISTICS |
|
375
|
|
|
*************/ |
|
376
|
|
|
/** |
|
377
|
|
|
* Get the statistic array detailed by generation. |
|
378
|
|
|
* Statistics for each generation are: |
|
379
|
|
|
* - The number of Sosa in generation |
|
380
|
|
|
* - The number of Sosa up to generation |
|
381
|
|
|
* - The number of distinct Sosa up to generation |
|
382
|
|
|
* - The year of the first birth in generation |
|
383
|
|
|
* - The year of the last birth in generation |
|
384
|
|
|
* - The average year of birth in generation |
|
385
|
|
|
* |
|
386
|
|
|
* @return array Statistics array |
|
387
|
|
|
*/ |
|
388
|
|
|
public function getStatisticsByGeneration() { |
|
389
|
|
|
if(!$this->is_setup) return array(); |
|
390
|
|
|
if(!$this->statistics_tab) { |
|
|
|
|
|
|
391
|
|
|
$this->statistics_tab = array(); |
|
392
|
|
|
if($maxGeneration = $this->getLastGeneration()) { |
|
393
|
|
|
for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
|
394
|
|
|
$birthStats = $this->getStatsBirthYearInGeneration($gen); |
|
395
|
|
|
$this->statistics_tab[$gen] = array( |
|
396
|
|
|
'sosaCount' => $this->getSosaCountAtGeneration($gen), |
|
397
|
|
|
'sosaTotalCount' => $this->getSosaCountUpToGeneration($gen), |
|
398
|
|
|
'diffSosaTotalCount' => $this->getDifferentSosaCountUpToGeneration($gen), |
|
399
|
|
|
'firstBirth' => $birthStats['first'], |
|
400
|
|
|
'lastBirth' => $birthStats['last'], |
|
401
|
|
|
'avgBirth' => $birthStats['avg'] |
|
402
|
|
|
); |
|
403
|
|
|
} |
|
404
|
|
|
} |
|
405
|
|
|
} |
|
406
|
|
|
return $this->statistics_tab; |
|
407
|
|
|
} |
|
408
|
|
|
|
|
409
|
|
|
/** |
|
410
|
|
|
* How many individuals exist in the tree. |
|
411
|
|
|
* |
|
412
|
|
|
* @return int |
|
413
|
|
|
*/ |
|
414
|
|
|
public function getTotalIndividuals() { |
|
415
|
|
|
if(!$this->is_setup) return 0; |
|
416
|
|
|
return Database::prepare( |
|
|
|
|
|
|
417
|
|
|
'SELECT COUNT(*) FROM `##individuals`' . |
|
418
|
|
|
' WHERE i_file = :tree_id') |
|
419
|
|
|
->execute(array('tree_id' => $this->tree->getTreeId())) |
|
420
|
|
|
->fetchOne() ?: 0; |
|
421
|
|
|
} |
|
422
|
|
|
|
|
423
|
|
|
/** |
|
424
|
|
|
* Get the total Sosa count for all generations |
|
425
|
|
|
* |
|
426
|
|
|
* @return number Number of Sosas |
|
427
|
|
|
*/ |
|
428
|
|
|
public function getSosaCount(){ |
|
429
|
|
|
if(!$this->is_setup) return 0; |
|
430
|
|
|
return Database::prepare( |
|
|
|
|
|
|
431
|
|
|
'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
432
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
433
|
|
|
->execute(array( |
|
434
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
435
|
|
|
'user_id' => $this->user->getUserId() |
|
436
|
|
|
))->fetchOne() ?: 0; |
|
437
|
|
|
} |
|
438
|
|
|
|
|
439
|
|
|
/** |
|
440
|
|
|
* Get the number of Sosa in a specific generation. |
|
441
|
|
|
* |
|
442
|
|
|
* @param number $gen Generation |
|
443
|
|
|
* @return number Number of Sosas in generation |
|
444
|
|
|
*/ |
|
445
|
|
|
public function getSosaCountAtGeneration($gen){ |
|
446
|
|
|
if(!$this->is_setup) return 0; |
|
447
|
|
|
return Database::prepare( |
|
|
|
|
|
|
448
|
|
|
'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
449
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
450
|
|
|
' AND majs_gen= :gen') |
|
451
|
|
|
->execute(array( |
|
452
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
453
|
|
|
'user_id' => $this->user->getUserId(), |
|
454
|
|
|
'gen' => $gen |
|
455
|
|
|
))->fetchOne() ?: 0; |
|
456
|
|
|
} |
|
457
|
|
|
|
|
458
|
|
|
/** |
|
459
|
|
|
* Get the total number of Sosa up to a specific generation. |
|
460
|
|
|
* |
|
461
|
|
|
* @param number $gen Generation |
|
462
|
|
|
* @return number Total number of Sosas up to generation |
|
463
|
|
|
*/ |
|
464
|
|
|
public function getSosaCountUpToGeneration($gen){ |
|
465
|
|
|
if(!$this->is_setup) return 0; |
|
466
|
|
|
return Database::prepare( |
|
|
|
|
|
|
467
|
|
|
'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
468
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
469
|
|
|
' AND majs_gen <= :gen') |
|
470
|
|
|
->execute(array( |
|
471
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
472
|
|
|
'user_id' => $this->user->getUserId(), |
|
473
|
|
|
'gen' => $gen |
|
474
|
|
|
))->fetchOne() ?: 0; |
|
475
|
|
|
} |
|
476
|
|
|
|
|
477
|
|
|
/** |
|
478
|
|
|
* Get the total number of distinct Sosa individual for all generations. |
|
479
|
|
|
* |
|
480
|
|
|
* @return number Total number of distinct individual |
|
481
|
|
|
*/ |
|
482
|
|
|
public function getDifferentSosaCount(){ |
|
483
|
|
|
if(!$this->is_setup) return 0; |
|
484
|
|
|
return Database::prepare( |
|
|
|
|
|
|
485
|
|
|
'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
486
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
|
487
|
|
|
->execute(array( |
|
488
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
489
|
|
|
'user_id' => $this->user->getUserId() |
|
490
|
|
|
))->fetchOne() ?: 0; |
|
491
|
|
|
} |
|
492
|
|
|
|
|
493
|
|
|
/** |
|
494
|
|
|
* Get the number of distinct Sosa individual up to a specific generation. |
|
495
|
|
|
* |
|
496
|
|
|
* @param number $gen Generation |
|
497
|
|
|
* @return number Number of distinct Sosa individuals up to generation |
|
498
|
|
|
*/ |
|
499
|
|
|
public function getDifferentSosaCountUpToGeneration($gen){ |
|
500
|
|
|
if(!$this->is_setup) return 0; |
|
501
|
|
|
return Database::prepare( |
|
|
|
|
|
|
502
|
|
|
'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
503
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
504
|
|
|
' AND majs_gen <= :gen') |
|
505
|
|
|
->execute(array( |
|
506
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
507
|
|
|
'user_id' => $this->user->getUserId(), |
|
508
|
|
|
'gen' => $gen |
|
509
|
|
|
))->fetchOne() ?: 0; |
|
510
|
|
|
} |
|
511
|
|
|
|
|
512
|
|
|
/** |
|
513
|
|
|
* Get an array of birth statistics for a specific generation |
|
514
|
|
|
* Statistics are : |
|
515
|
|
|
* - first : First birth year in generation |
|
516
|
|
|
* - last : Last birth year in generation |
|
517
|
|
|
* - avg : Average birth year |
|
518
|
|
|
* |
|
519
|
|
|
* @param number $gen Generation |
|
520
|
|
|
* @return array Birth statistics array |
|
521
|
|
|
*/ |
|
522
|
|
|
public function getStatsBirthYearInGeneration($gen){ |
|
523
|
|
|
if(!$this->is_setup) return array('first' => 0, 'avg' => 0, 'last' => 0); |
|
524
|
|
|
return Database::prepare( |
|
|
|
|
|
|
525
|
|
|
'SELECT MIN(majs_birth_year) AS first, AVG(majs_birth_year) AS avg, MAX(majs_birth_year) AS last'. |
|
526
|
|
|
' FROM `##maj_sosa`' . |
|
527
|
|
|
' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
528
|
|
|
' AND majs_gen=:gen AND NOT majs_birth_year = :birth_year') |
|
529
|
|
|
->execute(array( |
|
530
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
531
|
|
|
'user_id' => $this->user->getUserId(), |
|
532
|
|
|
'gen' => $gen, |
|
533
|
|
|
'birth_year' => 0)) |
|
534
|
|
|
->fetchOneRow(\PDO::FETCH_ASSOC) ?: array('first' => 0, 'avg' => 0, 'last' => 0); |
|
535
|
|
|
} |
|
536
|
|
|
|
|
537
|
|
|
/** |
|
538
|
|
|
* Get the mean generation time, based on a linear regression of birth years and generations |
|
539
|
|
|
* |
|
540
|
|
|
* @return number|NULL Mean generation time |
|
541
|
|
|
*/ |
|
542
|
|
|
public function getMeanGenerationTime(){ |
|
543
|
|
|
if(!$this->is_setup) return; |
|
544
|
|
|
if(!$this->statistics_tab){ |
|
|
|
|
|
|
545
|
|
|
$this->getStatisticsByGeneration(); |
|
546
|
|
|
} |
|
547
|
|
|
//Linear regression on x=generation and y=birthdate |
|
548
|
|
|
$sum_xy = 0; |
|
549
|
|
|
$sum_x=0; |
|
550
|
|
|
$sum_y=0; |
|
551
|
|
|
$sum_x2=0; |
|
552
|
|
|
$n=count($this->statistics_tab); |
|
553
|
|
|
foreach($this->statistics_tab as $gen=>$stats){ |
|
554
|
|
|
$sum_xy+=$gen*$stats['avgBirth']; |
|
555
|
|
|
$sum_x+=$gen; |
|
556
|
|
|
$sum_y+=$stats['avgBirth']; |
|
557
|
|
|
$sum_x2+=$gen*$gen; |
|
558
|
|
|
} |
|
559
|
|
|
$denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
560
|
|
|
if($denom!=0){ |
|
561
|
|
|
return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
562
|
|
|
} |
|
563
|
|
|
return null; |
|
564
|
|
|
} |
|
565
|
|
|
|
|
566
|
|
|
/** |
|
567
|
|
|
* Return a computed array of statistics about the dispersion of ancestors across the ancestors |
|
568
|
|
|
* at a specified generation. |
|
569
|
|
|
* This statistics cannot be used for generations above 11, as it would cause a out of range in MySQL |
|
570
|
|
|
* |
|
571
|
|
|
* Format: |
|
572
|
|
|
* - key : a base-2 representation of the ancestor at generation G for which exclusive ancestors have been found, |
|
573
|
|
|
* -1 is used for shared ancestors |
|
574
|
|
|
* For instance base2(0100) = base10(4) represent the maternal grand father |
|
575
|
|
|
* - values: number of ancestors exclusively in the ancestors of the ancestor in key |
|
576
|
|
|
* |
|
577
|
|
|
* For instance a result at generation 3 could be : |
|
578
|
|
|
* array ( -1 => 12 -> 12 ancestors are shared by the grand-parents |
|
579
|
|
|
* base10(1) => 32 -> 32 ancestors are exclusive to the paternal grand-father |
|
580
|
|
|
* base10(2) => 25 -> 25 ancestors are exclusive to the paternal grand-mother |
|
581
|
|
|
* base10(4) => 12 -> 12 ancestors are exclusive to the maternal grand-father |
|
582
|
|
|
* base10(8) => 30 -> 30 ancestors are exclusive to the maternal grand-mother |
|
583
|
|
|
* ) |
|
584
|
|
|
* |
|
585
|
|
|
* @param int $gen Reference generation |
|
586
|
|
|
* @return array |
|
587
|
|
|
*/ |
|
588
|
|
|
public function getAncestorDispersionForGen($gen) { |
|
589
|
|
|
if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
590
|
|
|
return Database::prepare( |
|
591
|
|
|
'SELECT branches, count(i_id)'. |
|
592
|
|
|
' FROM ('. |
|
593
|
|
|
' SELECT i_id,'. |
|
594
|
|
|
' CASE'. |
|
595
|
|
|
' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
|
596
|
|
|
' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
597
|
|
|
' END branches'. |
|
598
|
|
|
' FROM ('. |
|
599
|
|
|
' SELECT DISTINCT majs_i_id i_id,'. |
|
600
|
|
|
' POW(2, FLOOR(majs_sosa / POW(2, (majs_gen - :gen))) - POW(2, :gen -1)) branch'. |
|
601
|
|
|
' FROM `##maj_sosa`'. |
|
602
|
|
|
' WHERE majs_gedcom_id = :tree_id AND majs_user_id = :user_id'. |
|
603
|
|
|
' AND majs_gen >= :gen'. |
|
604
|
|
|
' ) indistat'. |
|
605
|
|
|
' GROUP BY i_id'. |
|
606
|
|
|
') grouped'. |
|
607
|
|
|
' GROUP BY branches') |
|
608
|
|
|
->execute(array( |
|
609
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
610
|
|
|
'user_id' => $this->user->getUserId(), |
|
611
|
|
|
'gen' => $gen |
|
612
|
|
|
))->fetchAssoc() ?: array(); |
|
613
|
|
|
} |
|
614
|
|
|
|
|
615
|
|
|
/** |
|
616
|
|
|
* Return an array of the most duplicated root Sosa ancestors. |
|
617
|
|
|
* The number of ancestors to return is limited by the parameter $limit. |
|
618
|
|
|
* If several individuals are tied when reaching the limit, none of them are returned, |
|
619
|
|
|
* which means that there can be less individuals returned than requested. |
|
620
|
|
|
* |
|
621
|
|
|
* Format: |
|
622
|
|
|
* - key : root Sosa individual |
|
623
|
|
|
* - value: number of duplications of the ancestor (e.g. 3 if it appears 3 times) |
|
624
|
|
|
* |
|
625
|
|
|
* @param number $limit Maximum number of individuals to return |
|
626
|
|
|
* @return array |
|
627
|
|
|
*/ |
|
628
|
|
|
public function getTopMultiSosaAncestorsNoTies($limit) { |
|
629
|
|
|
if(!$this->is_setup) return array(); |
|
630
|
|
|
return Database::prepare( |
|
631
|
|
|
'SELECT sosa_i_id, sosa_count FROM ('. |
|
632
|
|
|
' SELECT'. |
|
633
|
|
|
' top_sosa.sosa_i_id, top_sosa.sosa_count, top_sosa.sosa_min,'. |
|
634
|
|
|
' @keep := IF(@prev_count = 0 OR sosa_count = @prev_count, @keep, 1) AS keep,'. |
|
635
|
|
|
' @prev_count := top_sosa.sosa_count AS prev_count'. |
|
636
|
|
|
' FROM ('. |
|
637
|
|
|
' SELECT'. |
|
638
|
|
|
' sosa.majs_i_id sosa_i_id,'. |
|
639
|
|
|
' COUNT(sosa.majs_sosa) sosa_count,'. |
|
640
|
|
|
' MIN(sosa.majs_sosa) sosa_min'. |
|
641
|
|
|
' FROM ##maj_sosa AS sosa'. |
|
642
|
|
|
' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
643
|
|
|
' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
644
|
|
|
' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
645
|
|
|
' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
646
|
|
|
' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
|
647
|
|
|
' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
|
648
|
|
|
' WHERE sosa.majs_gedcom_id = :tree_id'. |
|
649
|
|
|
' AND sosa.majs_user_id = :user_id'. |
|
650
|
|
|
' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
651
|
|
|
' AND sosa_mot.majs_sosa IS NULL'. |
|
652
|
|
|
' GROUP BY sosa.majs_i_id'. |
|
653
|
|
|
' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
654
|
|
|
' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
|
655
|
|
|
' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
656
|
|
|
' ) AS top_sosa,'. |
|
657
|
|
|
' (SELECT @prev_count := 0, @keep := 0) x'. |
|
658
|
|
|
' ORDER BY top_sosa.sosa_count ASC'. |
|
659
|
|
|
' ) top_sosa_list'. |
|
660
|
|
|
' WHERE keep = 1'. |
|
661
|
|
|
' ORDER BY sosa_count DESC, sosa_min ASC' |
|
662
|
|
|
)->execute(array( |
|
663
|
|
|
'tree_id' => $this->tree->getTreeId(), |
|
664
|
|
|
'user_id' => $this->user->getUserId() |
|
665
|
|
|
))->fetchAssoc() ?: array(); |
|
666
|
|
|
} |
|
667
|
|
|
|
|
668
|
|
|
|
|
669
|
|
|
} |
|
670
|
|
|
|
jon48 /
webtrees-lib
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The issue could also be caused by a filter entry in the build configuration. If the path has been excluded in your configuration, e.g.
excluded_paths: ["lib/*"], you can move it to the dependency path list as follows:For further information see https://scrutinizer-ci.com/docs/tools/php/php-scrutinizer/#list-dependency-paths