@@ -62,7 +62,7 @@ discard block |
||
62 | 62 | $view_bag->set('title', $controller->getPageTitle()); |
63 | 63 | $view_bag->set('is_setup', false); |
64 | 64 | |
65 | - if($this->sosa_provider->isSetup()) { |
|
65 | + if ($this->sosa_provider->isSetup()) { |
|
66 | 66 | $view_bag->set('is_setup', true); |
67 | 67 | |
68 | 68 | $view_bag->set('root_indi', $this->sosa_provider->getRootIndi()); |
@@ -83,23 +83,23 @@ discard block |
||
83 | 83 | $view_bag->set('missinganc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList@missing&ged='.$wt_tree->getNameUrl().'&gen='); |
84 | 84 | $view_bag->set('sosaanc_url', 'module.php?mod='.$this->module->getName().'&mod_action=SosaList&ged='.$wt_tree->getNameUrl().'&gen='); |
85 | 85 | |
86 | - $gen_theoretical=1; |
|
87 | - $total_theoretical=0; |
|
88 | - $prev_diff=0; |
|
89 | - $prev_known=0.5; |
|
90 | - $gen_equiv=0; |
|
86 | + $gen_theoretical = 1; |
|
87 | + $total_theoretical = 0; |
|
88 | + $prev_diff = 0; |
|
89 | + $prev_known = 0.5; |
|
90 | + $gen_equiv = 0; |
|
91 | 91 | $generation_stats = array(); |
92 | 92 | |
93 | - foreach($stats_gen as $gen => $tab){ |
|
94 | - $genY1= I18N::translate('-'); |
|
95 | - $genY2= I18N::translate('-'); |
|
96 | - if($tab['firstBirth']>0) $genY1=$tab['firstEstimatedBirth']; |
|
97 | - if($tab['lastBirth']>0) $genY2=$tab['lastEstimatedBirth']; |
|
93 | + foreach ($stats_gen as $gen => $tab) { |
|
94 | + $genY1 = I18N::translate('-'); |
|
95 | + $genY2 = I18N::translate('-'); |
|
96 | + if ($tab['firstBirth'] > 0) $genY1 = $tab['firstEstimatedBirth']; |
|
97 | + if ($tab['lastBirth'] > 0) $genY2 = $tab['lastEstimatedBirth']; |
|
98 | 98 | $total_theoretical += $gen_theoretical; |
99 | 99 | $perc_sosa_count_theor = Functions::safeDivision($tab['sosaCount'], $gen_theoretical); |
100 | 100 | $gen_equiv += $perc_sosa_count_theor; |
101 | - $missing=2*$prev_known - $tab['sosaCount']; |
|
102 | - $gen_diff=$tab['diffSosaTotalCount']-$prev_diff; |
|
101 | + $missing = 2 * $prev_known - $tab['sosaCount']; |
|
102 | + $gen_diff = $tab['diffSosaTotalCount'] - $prev_diff; |
|
103 | 103 | |
104 | 104 | $generation_stats[$gen] = array( |
105 | 105 | 'gen_min_birth' => $genY1, |
@@ -108,7 +108,7 @@ discard block |
||
108 | 108 | 'known' => $tab['sosaCount'], |
109 | 109 | 'perc_known' => $perc_sosa_count_theor, |
110 | 110 | 'missing' => $missing, |
111 | - 'perc_missing' => 1-Functions::safeDivision($tab['sosaCount'], 2*$prev_known), |
|
111 | + 'perc_missing' => 1 - Functions::safeDivision($tab['sosaCount'], 2 * $prev_known), |
|
112 | 112 | 'total_known' => $tab['sosaTotalCount'], |
113 | 113 | 'perc_total_known' => Functions::safeDivision($tab['sosaTotalCount'], $total_theoretical), |
114 | 114 | 'different' => $gen_diff, |
@@ -118,8 +118,8 @@ discard block |
||
118 | 118 | ); |
119 | 119 | |
120 | 120 | $gen_theoretical = $gen_theoretical * 2; |
121 | - $prev_known=$tab['sosaCount']; |
|
122 | - $prev_diff=$tab['diffSosaTotalCount']; |
|
121 | + $prev_known = $tab['sosaCount']; |
|
122 | + $prev_diff = $tab['diffSosaTotalCount']; |
|
123 | 123 | } |
124 | 124 | |
125 | 125 | $view_bag->set('generation_stats', $generation_stats); |
@@ -127,13 +127,12 @@ discard block |
||
127 | 127 | |
128 | 128 | $top10multiancestors = $this->sosa_provider->getTopMultiSosaAncestorsNoTies(10); |
129 | 129 | $top10ancestors = array(); |
130 | - if($top10multiancestors !== null && count($top10multiancestors)) { |
|
131 | - foreach($top10multiancestors as $pid => $count) { |
|
130 | + if ($top10multiancestors !== null && count($top10multiancestors)) { |
|
131 | + foreach ($top10multiancestors as $pid => $count) { |
|
132 | 132 | $indi = Individual::getInstance($pid, $wt_tree); |
133 | - if($indi !== null && $indi->canShowName()) { |
|
133 | + if ($indi !== null && $indi->canShowName()) { |
|
134 | 134 | array_key_exists($count, $top10ancestors) ? |
135 | - $top10ancestors[$count][] = $indi: |
|
136 | - $top10ancestors[$count] = array($count => $indi); |
|
135 | + $top10ancestors[$count][] = $indi : $top10ancestors[$count] = array($count => $indi); |
|
137 | 136 | } |
138 | 137 | } |
139 | 138 | } |
@@ -154,27 +153,27 @@ discard block |
||
154 | 153 | private function htmlAncestorDispersionG2() |
155 | 154 | { |
156 | 155 | $ancestorsDispGen2 = $this->sosa_provider->getAncestorDispersionForGen(2); |
157 | - if(count($ancestorsDispGen2) == 0) return; |
|
156 | + if (count($ancestorsDispGen2) == 0) return; |
|
158 | 157 | |
159 | 158 | $size = '600x300'; |
160 | 159 | |
161 | 160 | $total = array_sum($ancestorsDispGen2); |
162 | 161 | $father_count = array_key_exists(1, $ancestorsDispGen2) ? $ancestorsDispGen2[1] : 0; |
163 | - $father = array ( |
|
162 | + $father = array( |
|
164 | 163 | 'color' => '84beff', |
165 | 164 | 'count' => $father_count, |
166 | 165 | 'perc' => Functions::safeDivision($father_count, $total), |
167 | 166 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fat') |
168 | 167 | ); |
169 | 168 | $mother_count = array_key_exists(2, $ancestorsDispGen2) ? $ancestorsDispGen2[2] : 0; |
170 | - $mother = array ( |
|
169 | + $mother = array( |
|
171 | 170 | 'color' => 'ffd1dc', |
172 | 171 | 'count' => $mother_count, |
173 | 172 | 'perc' => Functions::safeDivision($mother_count, $total), |
174 | 173 | 'name' => \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('mot') |
175 | 174 | ); |
176 | 175 | $shared_count = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
177 | - $shared = array ( |
|
176 | + $shared = array( |
|
178 | 177 | 'color' => '777777', |
179 | 178 | 'count' => $shared_count, |
180 | 179 | 'perc' => Functions::safeDivision($shared_count, $total), |
@@ -184,10 +183,10 @@ discard block |
||
184 | 183 | $chd = $this->arrayToExtendedEncoding(array(4095 * $father['perc'], 4095 * $shared['perc'], 4095 * $mother['perc'])); |
185 | 184 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion'); |
186 | 185 | $chl = |
187 | - $father['name'] . ' - ' . I18N::percentage($father['perc'], 1) . '|' . |
|
188 | - $shared['name'] . ' - ' . I18N::percentage($shared['perc'], 1) . '|' . |
|
189 | - $mother['name'] . ' - ' . I18N::percentage($mother['perc'], 1); |
|
190 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
186 | + $father['name'].' - '.I18N::percentage($father['perc'], 1).'|'. |
|
187 | + $shared['name'].' - '.I18N::percentage($shared['perc'], 1).'|'. |
|
188 | + $mother['name'].' - '.I18N::percentage($mother['perc'], 1); |
|
189 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$father['color']},{$shared['color']},{$mother['color']}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
191 | 190 | } |
192 | 191 | |
193 | 192 | /** |
@@ -211,7 +210,7 @@ discard block |
||
211 | 210 | $total_motfat = array_key_exists(4, $ancestorsDispGen2) ? $ancestorsDispGen2[4] : 0; |
212 | 211 | $total_motmot = array_key_exists(8, $ancestorsDispGen2) ? $ancestorsDispGen2[8] : 0; |
213 | 212 | $total_sha = array_key_exists(-1, $ancestorsDispGen2) ? $ancestorsDispGen2[-1] : 0; |
214 | - $total = $total_fatfat + $total_fatmot + $total_motfat+ $total_motmot + $total_sha; |
|
213 | + $total = $total_fatfat + $total_fatmot + $total_motfat + $total_motmot + $total_sha; |
|
215 | 214 | |
216 | 215 | $chd = $this->arrayToExtendedEncoding(array( |
217 | 216 | 4095 * Functions::safeDivision($total_fatfat, $total), |
@@ -222,12 +221,12 @@ discard block |
||
222 | 221 | )); |
223 | 222 | $chart_title = I18N::translate('Known Sosa ancestors\' dispersion - G3'); |
224 | 223 | $chl = |
225 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1) . '|' . |
|
226 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1) . '|' . |
|
227 | - I18N::translate('Shared') . ' - ' . I18N::percentage(Functions::safeDivision($total_sha, $total), 1) . '|' . |
|
228 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat') . ' - ' . I18N::percentage(Functions::safeDivision($total_motfat, $total), 1) . '|' . |
|
229 | - \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot') . ' - ' . I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
230 | - return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"" . $chart_title . "\" title=\"" . $chart_title . "\" />"; |
|
224 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatfat').' - '.I18N::percentage(Functions::safeDivision($total_fatfat, $total), 1).'|'. |
|
225 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('fatmot').' - '.I18N::percentage(Functions::safeDivision($total_fatmot, $total), 1).'|'. |
|
226 | + I18N::translate('Shared').' - '.I18N::percentage(Functions::safeDivision($total_sha, $total), 1).'|'. |
|
227 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motfat').' - '.I18N::percentage(Functions::safeDivision($total_motfat, $total), 1).'|'. |
|
228 | + \Fisharebest\Webtrees\Functions\Functions::getRelationshipNameFromPath('motmot').' - '.I18N::percentage(Functions::safeDivision($total_motmot, $total), 1); |
|
229 | + return "<img src=\"https://chart.googleapis.com/chart?cht=p&chp=1.5708&chd=e:{$chd}&chs={$size}&chco={$color_fatfat},{$color_fatmot},{$color_shared},{$color_motfat},{$color_motmot}&chf=bg,s,ffffff00&chl={$chl}\" alt=\"".$chart_title."\" title=\"".$chart_title."\" />"; |
|
231 | 230 | } |
232 | 231 | |
233 | 232 | /** |
@@ -243,9 +242,9 @@ discard block |
||
243 | 242 | if ($value < 0) { |
244 | 243 | $value = 0; |
245 | 244 | } |
246 | - $first = (int) ($value / 64); |
|
245 | + $first = (int)($value / 64); |
|
247 | 246 | $second = $value % 64; |
248 | - $encoding .= $xencoding[(int) $first] . $xencoding[(int) $second]; |
|
247 | + $encoding .= $xencoding[(int)$first].$xencoding[(int)$second]; |
|
249 | 248 | } |
250 | 249 | |
251 | 250 | return $encoding; |
@@ -22,8 +22,8 @@ |
||
22 | 22 | public function upgrade() { |
23 | 23 | |
24 | 24 | Database::exec( |
25 | - 'ALTER TABLE `##maj_sosa`' . |
|
26 | - ' ADD COLUMN majs_birth_year_est SMALLINT NULL AFTER majs_birth_year,' . |
|
25 | + 'ALTER TABLE `##maj_sosa`'. |
|
26 | + ' ADD COLUMN majs_birth_year_est SMALLINT NULL AFTER majs_birth_year,'. |
|
27 | 27 | ' ADD COLUMN majs_death_year_est SMALLINT NULL AFTER majs_death_year' |
28 | 28 | ); |
29 | 29 | } |
@@ -84,18 +84,18 @@ discard block |
||
84 | 84 | * @param User $user |
85 | 85 | */ |
86 | 86 | public function __construct(Tree $tree, User $user = null) { |
87 | - if(self::$default_user === null) |
|
87 | + if (self::$default_user === null) |
|
88 | 88 | self::$default_user = User::find(-1); |
89 | 89 | |
90 | 90 | $this->tree = $tree; |
91 | 91 | $this->user = $user; |
92 | 92 | $this->is_setup = true; |
93 | - if($this->user === null) $this->user = Auth::user(); |
|
94 | - if(strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
93 | + if ($this->user === null) $this->user = Auth::user(); |
|
94 | + if (strlen($this->user->getUserId()) == 0) $this->user = self::$default_user; |
|
95 | 95 | |
96 | 96 | // Check if the user, or the default user, has a root already setup; |
97 | - if(empty($this->getRootIndiId())) { |
|
98 | - if($this->user == self::$default_user) { // If the default user is not setup |
|
97 | + if (empty($this->getRootIndiId())) { |
|
98 | + if ($this->user == self::$default_user) { // If the default user is not setup |
|
99 | 99 | $this->is_setup = false; |
100 | 100 | } |
101 | 101 | else { |
@@ -127,7 +127,7 @@ discard block |
||
127 | 127 | */ |
128 | 128 | public function getRootIndi() { |
129 | 129 | $root_indi_id = $this->getRootIndiId(); |
130 | - if(!empty($root_indi_id)) { |
|
130 | + if (!empty($root_indi_id)) { |
|
131 | 131 | return Individual::getInstance($root_indi_id, $this->tree); |
132 | 132 | } |
133 | 133 | return null; |
@@ -141,7 +141,7 @@ discard block |
||
141 | 141 | * Remove all Sosa entries related to the gedcom file and user |
142 | 142 | */ |
143 | 143 | public function deleteAll() { |
144 | - if(!$this->is_setup) return; |
|
144 | + if (!$this->is_setup) return; |
|
145 | 145 | Database::prepare( |
146 | 146 | 'DELETE FROM `##maj_sosa`'. |
147 | 147 | ' WHERE majs_gedcom_id= :tree_id and majs_user_id = :user_id ') |
@@ -157,12 +157,12 @@ discard block |
||
157 | 157 | * @param int $sosa |
158 | 158 | */ |
159 | 159 | public function deleteAncestors($sosa) { |
160 | - if(!$this->is_setup) return; |
|
160 | + if (!$this->is_setup) return; |
|
161 | 161 | $gen = Functions::getGeneration($sosa); |
162 | 162 | Database::prepare( |
163 | 163 | 'DELETE FROM `##maj_sosa`'. |
164 | - ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id' . |
|
165 | - ' AND majs_gen >= :gen' . |
|
164 | + ' WHERE majs_gedcom_id=:tree_id and majs_user_id = :user_id'. |
|
165 | + ' AND majs_gen >= :gen'. |
|
166 | 166 | ' AND FLOOR(majs_sosa / (POW(2, (majs_gen - :gen)))) = :sosa' |
167 | 167 | )->execute(array( |
168 | 168 | 'tree_id' => $this->tree->getTreeId(), |
@@ -177,7 +177,7 @@ discard block |
||
177 | 177 | * @param array $sosa_records |
178 | 178 | */ |
179 | 179 | public function insertOrUpdate($sosa_records) { |
180 | - if(!$this->is_setup) return; |
|
180 | + if (!$this->is_setup) return; |
|
181 | 181 | |
182 | 182 | $treeid = $this->tree->getTreeId(); |
183 | 183 | $userid = $this->user->getUserId(); |
@@ -185,9 +185,9 @@ discard block |
||
185 | 185 | $values_table = array(); |
186 | 186 | |
187 | 187 | $i = 0; |
188 | - foreach ($sosa_records as $row) { |
|
188 | + foreach ($sosa_records as $row) { |
|
189 | 189 | $gen = Functions::getGeneration($row['sosa']); |
190 | - if($gen <= self::MAX_DB_GENERATIONS) { |
|
190 | + if ($gen <= self::MAX_DB_GENERATIONS) { |
|
191 | 191 | $questionmarks_table[] = |
192 | 192 | '(:tree_id'.$i.', :user_id'.$i.', :sosa'.$i.', :indi_id'.$i.', :gen'.$i.', :byear'.$i.', :byearest'.$i.', :dyear'.$i.', :dyearest'.$i.')'; |
193 | 193 | $values_table = array_merge( |
@@ -208,9 +208,9 @@ discard block |
||
208 | 208 | $i++; |
209 | 209 | } |
210 | 210 | |
211 | - $sql = 'REPLACE INTO `##maj_sosa`' . |
|
212 | - ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)' . |
|
213 | - ' VALUES '. implode(',', $questionmarks_table); |
|
211 | + $sql = 'REPLACE INTO `##maj_sosa`'. |
|
212 | + ' (majs_gedcom_id, majs_user_id, majs_sosa, majs_i_id, majs_gen, majs_birth_year, majs_birth_year_est, majs_death_year, majs_death_year_est)'. |
|
213 | + ' VALUES '.implode(',', $questionmarks_table); |
|
214 | 214 | Database::prepare($sql)->execute($values_table); |
215 | 215 | } |
216 | 216 | |
@@ -226,7 +226,7 @@ discard block |
||
226 | 226 | * @return array Array of sosa numbers |
227 | 227 | */ |
228 | 228 | public function getSosaNumbers(Individual $indi) { |
229 | - if(!$this->is_setup) return array(); |
|
229 | + if (!$this->is_setup) return array(); |
|
230 | 230 | return Database::prepare( |
231 | 231 | 'SELECT majs_sosa, majs_gen FROM `##maj_sosa`'. |
232 | 232 | ' WHERE majs_i_id=:indi_id AND majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -243,7 +243,7 @@ discard block |
||
243 | 243 | * @return number Last generation if found, 1 otherwise |
244 | 244 | */ |
245 | 245 | public function getLastGeneration() { |
246 | - if(!$this->is_setup) return; |
|
246 | + if (!$this->is_setup) return; |
|
247 | 247 | return Database::prepare( |
248 | 248 | 'SELECT MAX(majs_gen) FROM `##maj_sosa`'. |
249 | 249 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' |
@@ -262,13 +262,13 @@ discard block |
||
262 | 262 | * |
263 | 263 | * @return array Associative array of Sosa ancestors, with their generation, comma separated |
264 | 264 | */ |
265 | - public function getAllSosaWithGenerations(){ |
|
266 | - if(!$this->is_setup) return array(); |
|
265 | + public function getAllSosaWithGenerations() { |
|
266 | + if (!$this->is_setup) return array(); |
|
267 | 267 | return Database::prepare( |
268 | - 'SELECT majs_i_id AS indi,' . |
|
269 | - ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations' . |
|
270 | - ' FROM `##maj_sosa`' . |
|
271 | - ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id' . |
|
268 | + 'SELECT majs_i_id AS indi,'. |
|
269 | + ' GROUP_CONCAT(DISTINCT majs_gen ORDER BY majs_gen ASC SEPARATOR ",") AS generations'. |
|
270 | + ' FROM `##maj_sosa`'. |
|
271 | + ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
|
272 | 272 | ' GROUP BY majs_i_id' |
273 | 273 | )->execute(array( |
274 | 274 | 'tree_id' => $this->tree->getTreeId(), |
@@ -282,13 +282,13 @@ discard block |
||
282 | 282 | * @param number $gen Generation |
283 | 283 | * @return array Array of Sosa individuals |
284 | 284 | */ |
285 | - public function getSosaListAtGeneration($gen){ |
|
286 | - if(!$this->is_setup) return array(); |
|
287 | - if(!$this->sosa_list_by_gen) |
|
285 | + public function getSosaListAtGeneration($gen) { |
|
286 | + if (!$this->is_setup) return array(); |
|
287 | + if (!$this->sosa_list_by_gen) |
|
288 | 288 | $this->sosa_list_by_gen = array(); |
289 | 289 | |
290 | - if($gen){ |
|
291 | - if(!isset($this->sosa_list_by_gen[$gen])){ |
|
290 | + if ($gen) { |
|
291 | + if (!isset($this->sosa_list_by_gen[$gen])) { |
|
292 | 292 | $this->sosa_list_by_gen[$gen] = Database::prepare( |
293 | 293 | 'SELECT majs_sosa AS sosa, majs_i_id AS indi'. |
294 | 294 | ' FROM `##maj_sosa`'. |
@@ -313,13 +313,13 @@ discard block |
||
313 | 313 | * @param number $gen Generation |
314 | 314 | * @return array Array of Sosa families |
315 | 315 | */ |
316 | - public function getFamilySosaListAtGeneration($gen){ |
|
317 | - if(!$this->is_setup) return array(); |
|
318 | - if(!$this->sosa_fam_list_by_gen) |
|
316 | + public function getFamilySosaListAtGeneration($gen) { |
|
317 | + if (!$this->is_setup) return array(); |
|
318 | + if (!$this->sosa_fam_list_by_gen) |
|
319 | 319 | $this->sosa_fam_list_by_gen = array(); |
320 | 320 | |
321 | - if($gen){ |
|
322 | - if(!isset($this->sosa_fam_list_by_gen[$gen])){ |
|
321 | + if ($gen) { |
|
322 | + if (!isset($this->sosa_fam_list_by_gen[$gen])) { |
|
323 | 323 | $this->sosa_fam_list_by_gen[$gen] = Database::prepare( |
324 | 324 | 'SELECT s1.majs_sosa AS sosa, f_id AS fam'. |
325 | 325 | ' FROM `##families`'. |
@@ -349,9 +349,9 @@ discard block |
||
349 | 349 | * @param number $gen Generation |
350 | 350 | * @return array Array of Sosa individuals |
351 | 351 | */ |
352 | - public function getMissingSosaListAtGeneration($gen){ |
|
353 | - if(!$this->is_setup) return array(); |
|
354 | - if($gen){ |
|
352 | + public function getMissingSosaListAtGeneration($gen) { |
|
353 | + if (!$this->is_setup) return array(); |
|
354 | + if ($gen) { |
|
355 | 355 | return $this->sosa_list_by_gen[$gen] = Database::prepare( |
356 | 356 | 'SELECT schild.majs_sosa sosa, schild.majs_i_id indi, sfat.majs_sosa IS NOT NULL has_father, smot.majs_sosa IS NOT NULL has_mother'. |
357 | 357 | ' FROM `##maj_sosa` schild'. |
@@ -390,10 +390,10 @@ discard block |
||
390 | 390 | * @return array Statistics array |
391 | 391 | */ |
392 | 392 | public function getStatisticsByGeneration() { |
393 | - if(!$this->is_setup) return array(); |
|
394 | - if(!$this->statistics_tab) { |
|
393 | + if (!$this->is_setup) return array(); |
|
394 | + if (!$this->statistics_tab) { |
|
395 | 395 | $this->statistics_tab = array(); |
396 | - if($maxGeneration = $this->getLastGeneration()) { |
|
396 | + if ($maxGeneration = $this->getLastGeneration()) { |
|
397 | 397 | for ($gen = 1; $gen <= $maxGeneration; $gen++) { |
398 | 398 | $birthStats = $this->getStatsBirthYearInGeneration($gen); |
399 | 399 | $this->statistics_tab[$gen] = array( |
@@ -418,9 +418,9 @@ discard block |
||
418 | 418 | * @return int |
419 | 419 | */ |
420 | 420 | public function getTotalIndividuals() { |
421 | - if(!$this->is_setup) return 0; |
|
421 | + if (!$this->is_setup) return 0; |
|
422 | 422 | return Database::prepare( |
423 | - 'SELECT COUNT(*) FROM `##individuals`' . |
|
423 | + 'SELECT COUNT(*) FROM `##individuals`'. |
|
424 | 424 | ' WHERE i_file = :tree_id') |
425 | 425 | ->execute(array('tree_id' => $this->tree->getTreeId())) |
426 | 426 | ->fetchOne() ?: 0; |
@@ -431,10 +431,10 @@ discard block |
||
431 | 431 | * |
432 | 432 | * @return number Number of Sosas |
433 | 433 | */ |
434 | - public function getSosaCount(){ |
|
435 | - if(!$this->is_setup) return 0; |
|
434 | + public function getSosaCount() { |
|
435 | + if (!$this->is_setup) return 0; |
|
436 | 436 | return Database::prepare( |
437 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
437 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
438 | 438 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
439 | 439 | ->execute(array( |
440 | 440 | 'tree_id' => $this->tree->getTreeId(), |
@@ -448,10 +448,10 @@ discard block |
||
448 | 448 | * @param number $gen Generation |
449 | 449 | * @return number Number of Sosas in generation |
450 | 450 | */ |
451 | - public function getSosaCountAtGeneration($gen){ |
|
452 | - if(!$this->is_setup) return 0; |
|
451 | + public function getSosaCountAtGeneration($gen) { |
|
452 | + if (!$this->is_setup) return 0; |
|
453 | 453 | return Database::prepare( |
454 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
454 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
455 | 455 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
456 | 456 | ' AND majs_gen= :gen') |
457 | 457 | ->execute(array( |
@@ -467,10 +467,10 @@ discard block |
||
467 | 467 | * @param number $gen Generation |
468 | 468 | * @return number Total number of Sosas up to generation |
469 | 469 | */ |
470 | - public function getSosaCountUpToGeneration($gen){ |
|
471 | - if(!$this->is_setup) return 0; |
|
470 | + public function getSosaCountUpToGeneration($gen) { |
|
471 | + if (!$this->is_setup) return 0; |
|
472 | 472 | return Database::prepare( |
473 | - 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`' . |
|
473 | + 'SELECT COUNT(majs_sosa) FROM `##maj_sosa`'. |
|
474 | 474 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
475 | 475 | ' AND majs_gen <= :gen') |
476 | 476 | ->execute(array( |
@@ -485,10 +485,10 @@ discard block |
||
485 | 485 | * |
486 | 486 | * @return number Total number of distinct individual |
487 | 487 | */ |
488 | - public function getDifferentSosaCount(){ |
|
489 | - if(!$this->is_setup) return 0; |
|
488 | + public function getDifferentSosaCount() { |
|
489 | + if (!$this->is_setup) return 0; |
|
490 | 490 | return Database::prepare( |
491 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
491 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
492 | 492 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id') |
493 | 493 | ->execute(array( |
494 | 494 | 'tree_id' => $this->tree->getTreeId(), |
@@ -502,10 +502,10 @@ discard block |
||
502 | 502 | * @param number $gen Generation |
503 | 503 | * @return number Number of distinct Sosa individuals up to generation |
504 | 504 | */ |
505 | - public function getDifferentSosaCountUpToGeneration($gen){ |
|
506 | - if(!$this->is_setup) return 0; |
|
505 | + public function getDifferentSosaCountUpToGeneration($gen) { |
|
506 | + if (!$this->is_setup) return 0; |
|
507 | 507 | return Database::prepare( |
508 | - 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`' . |
|
508 | + 'SELECT COUNT(DISTINCT majs_i_id) FROM `##maj_sosa`'. |
|
509 | 509 | ' WHERE majs_gedcom_id=:tree_id AND majs_user_id=:user_id'. |
510 | 510 | ' AND majs_gen <= :gen') |
511 | 511 | ->execute(array( |
@@ -527,8 +527,8 @@ discard block |
||
527 | 527 | * @param number $gen Generation |
528 | 528 | * @return array Birth statistics array |
529 | 529 | */ |
530 | - public function getStatsBirthYearInGeneration($gen){ |
|
531 | - if(!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
530 | + public function getStatsBirthYearInGeneration($gen) { |
|
531 | + if (!$this->is_setup) return array('first' => 0, 'first_est' => 0, 'avg' => 0, 'last' => 0, 'last_est' => 0); |
|
532 | 532 | return Database::prepare( |
533 | 533 | 'SELECT'. |
534 | 534 | ' MIN(majs_birth_year) AS first, MIN(majs_birth_year_est) AS first_est,'. |
@@ -549,26 +549,26 @@ discard block |
||
549 | 549 | * |
550 | 550 | * @return number|NULL Mean generation time |
551 | 551 | */ |
552 | - public function getMeanGenerationTime(){ |
|
553 | - if(!$this->is_setup) return; |
|
554 | - if(!$this->statistics_tab){ |
|
552 | + public function getMeanGenerationTime() { |
|
553 | + if (!$this->is_setup) return; |
|
554 | + if (!$this->statistics_tab) { |
|
555 | 555 | $this->getStatisticsByGeneration(); |
556 | 556 | } |
557 | 557 | //Linear regression on x=generation and y=birthdate |
558 | 558 | $sum_xy = 0; |
559 | - $sum_x=0; |
|
560 | - $sum_y=0; |
|
561 | - $sum_x2=0; |
|
562 | - $n=count($this->statistics_tab); |
|
563 | - foreach($this->statistics_tab as $gen=>$stats){ |
|
564 | - $sum_xy+=$gen*$stats['avgBirth']; |
|
565 | - $sum_x+=$gen; |
|
566 | - $sum_y+=$stats['avgBirth']; |
|
567 | - $sum_x2+=$gen*$gen; |
|
559 | + $sum_x = 0; |
|
560 | + $sum_y = 0; |
|
561 | + $sum_x2 = 0; |
|
562 | + $n = count($this->statistics_tab); |
|
563 | + foreach ($this->statistics_tab as $gen=>$stats) { |
|
564 | + $sum_xy += $gen * $stats['avgBirth']; |
|
565 | + $sum_x += $gen; |
|
566 | + $sum_y += $stats['avgBirth']; |
|
567 | + $sum_x2 += $gen * $gen; |
|
568 | 568 | } |
569 | - $denom=($n*$sum_x2)-($sum_x*$sum_x); |
|
570 | - if($denom!=0){ |
|
571 | - return -(($n*$sum_xy)-($sum_x*$sum_y))/($denom); |
|
569 | + $denom = ($n * $sum_x2) - ($sum_x * $sum_x); |
|
570 | + if ($denom != 0) { |
|
571 | + return -(($n * $sum_xy) - ($sum_x * $sum_y)) / ($denom); |
|
572 | 572 | } |
573 | 573 | return null; |
574 | 574 | } |
@@ -596,14 +596,14 @@ discard block |
||
596 | 596 | * @return array |
597 | 597 | */ |
598 | 598 | public function getAncestorDispersionForGen($gen) { |
599 | - if(!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
599 | + if (!$this->is_setup || $gen > 11) return array(); // Going further than 11 gen will be out of range in the query |
|
600 | 600 | return Database::prepare( |
601 | 601 | 'SELECT branches, count(i_id)'. |
602 | 602 | ' FROM ('. |
603 | 603 | ' SELECT i_id,'. |
604 | 604 | ' CASE'. |
605 | 605 | ' WHEN CEIL(LOG2(SUM(branch))) = LOG2(SUM(branch)) THEN SUM(branch)'. |
606 | - ' ELSE -1'. // We put all ancestors shared between some branches in the same bucket |
|
606 | + ' ELSE -1'.// We put all ancestors shared between some branches in the same bucket |
|
607 | 607 | ' END branches'. |
608 | 608 | ' FROM ('. |
609 | 609 | ' SELECT DISTINCT majs_i_id i_id,'. |
@@ -636,7 +636,7 @@ discard block |
||
636 | 636 | * @return array |
637 | 637 | */ |
638 | 638 | public function getTopMultiSosaAncestorsNoTies($limit) { |
639 | - if(!$this->is_setup) return array(); |
|
639 | + if (!$this->is_setup) return array(); |
|
640 | 640 | return Database::prepare( |
641 | 641 | 'SELECT sosa_i_id, sosa_count FROM ('. |
642 | 642 | ' SELECT'. |
@@ -649,20 +649,20 @@ discard block |
||
649 | 649 | ' COUNT(sosa.majs_sosa) sosa_count,'. |
650 | 650 | ' MIN(sosa.majs_sosa) sosa_min'. |
651 | 651 | ' FROM ##maj_sosa AS sosa'. |
652 | - ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'. // Link to sosa's father |
|
652 | + ' LEFT JOIN ##maj_sosa AS sosa_fat ON sosa_fat.majs_sosa = 2 * sosa.majs_sosa'.// Link to sosa's father |
|
653 | 653 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
654 | 654 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
655 | - ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'. // Link to sosa's mother |
|
655 | + ' LEFT JOIN ##maj_sosa AS sosa_mot on sosa_mot.majs_sosa = (2 * sosa.majs_sosa + 1)'.// Link to sosa's mother |
|
656 | 656 | ' AND sosa.majs_gedcom_id = sosa_fat.majs_gedcom_id'. |
657 | 657 | ' AND sosa.majs_user_id = sosa_fat.majs_user_id'. |
658 | 658 | ' WHERE sosa.majs_gedcom_id = :tree_id'. |
659 | 659 | ' AND sosa.majs_user_id = :user_id'. |
660 | - ' AND sosa_fat.majs_sosa IS NULL'. // We keep only root individuals, i.e. those with no father or mother |
|
660 | + ' AND sosa_fat.majs_sosa IS NULL'.// We keep only root individuals, i.e. those with no father or mother |
|
661 | 661 | ' AND sosa_mot.majs_sosa IS NULL'. |
662 | 662 | ' GROUP BY sosa.majs_i_id'. |
663 | - ' HAVING COUNT(sosa.majs_sosa) > 1'. // Limit to the duplicate sosas. |
|
663 | + ' HAVING COUNT(sosa.majs_sosa) > 1'.// Limit to the duplicate sosas. |
|
664 | 664 | ' ORDER BY COUNT(sosa.majs_sosa) DESC'. |
665 | - ' LIMIT ' . ($limit + 1) . // We want to select one more than required |
|
665 | + ' LIMIT '.($limit + 1).// We want to select one more than required |
|
666 | 666 | ' ) AS top_sosa,'. |
667 | 667 | ' (SELECT @prev_count := 0, @keep := 0) x'. |
668 | 668 | ' ORDER BY top_sosa.sosa_count ASC'. |