|
1
|
|
|
<?php |
|
2
|
|
|
|
|
3
|
|
|
/** |
|
4
|
|
|
* webtrees-lib: MyArtJaub library for webtrees |
|
5
|
|
|
* |
|
6
|
|
|
* @package MyArtJaub\Webtrees |
|
7
|
|
|
* @subpackage Sosa |
|
8
|
|
|
* @author Jonathan Jaubart <[email protected]> |
|
9
|
|
|
* @copyright Copyright (c) 2009-2020, Jonathan Jaubart |
|
10
|
|
|
* @license http://www.gnu.org/licenses/gpl.html GNU General Public License, version 3 |
|
11
|
|
|
*/ |
|
12
|
|
|
|
|
13
|
|
|
declare(strict_types=1); |
|
14
|
|
|
|
|
15
|
|
|
namespace MyArtJaub\Webtrees\Module\Sosa\Http\RequestHandlers; |
|
16
|
|
|
|
|
17
|
|
|
use Fisharebest\Webtrees\Auth; |
|
18
|
|
|
use Fisharebest\Webtrees\DefaultUser; |
|
19
|
|
|
use Fisharebest\Webtrees\I18N; |
|
20
|
|
|
use Fisharebest\Webtrees\Tree; |
|
21
|
|
|
use Fisharebest\Webtrees\Exceptions\HttpNotFoundException; |
|
22
|
|
|
use Fisharebest\Webtrees\Http\ViewResponseTrait; |
|
23
|
|
|
use Fisharebest\Webtrees\Module\ModuleThemeInterface; |
|
24
|
|
|
use Fisharebest\Webtrees\Services\ModuleService; |
|
25
|
|
|
use MyArtJaub\Webtrees\Module\Sosa\SosaModule; |
|
26
|
|
|
use MyArtJaub\Webtrees\Module\Sosa\Services\SosaStatisticsService; |
|
27
|
|
|
use Psr\Http\Message\ResponseInterface; |
|
28
|
|
|
use Psr\Http\Message\ServerRequestInterface; |
|
29
|
|
|
use Psr\Http\Server\RequestHandlerInterface; |
|
30
|
|
|
|
|
31
|
|
|
/** |
|
32
|
|
|
* Request handler for listing Sosa ancestors |
|
33
|
|
|
* |
|
34
|
|
|
*/ |
|
35
|
|
|
class SosaStatistics implements RequestHandlerInterface |
|
36
|
|
|
{ |
|
37
|
|
|
use ViewResponseTrait; |
|
38
|
|
|
|
|
39
|
|
|
/** |
|
40
|
|
|
* @var SosaModule $module |
|
41
|
|
|
*/ |
|
42
|
|
|
private $module; |
|
43
|
|
|
|
|
44
|
|
|
/** |
|
45
|
|
|
* Constructor for AncestorsList Request Handler |
|
46
|
|
|
* |
|
47
|
|
|
* @param ModuleService $module_service |
|
48
|
|
|
*/ |
|
49
|
|
|
public function __construct( |
|
50
|
|
|
ModuleService $module_service |
|
51
|
|
|
) { |
|
52
|
|
|
$this->module = $module_service->findByInterface(SosaModule::class)->first(); |
|
53
|
|
|
} |
|
54
|
|
|
|
|
55
|
|
|
/** |
|
56
|
|
|
* {@inheritDoc} |
|
57
|
|
|
* @see \Psr\Http\Server\RequestHandlerInterface::handle() |
|
58
|
|
|
*/ |
|
59
|
|
|
public function handle(ServerRequestInterface $request): ResponseInterface |
|
60
|
|
|
{ |
|
61
|
|
|
if ($this->module === null) { |
|
62
|
|
|
throw new HttpNotFoundException(I18N::translate('The attached module could not be found.')); |
|
63
|
|
|
} |
|
64
|
|
|
|
|
65
|
|
|
$tree = $request->getAttribute('tree'); |
|
66
|
|
|
assert($tree instanceof Tree); |
|
67
|
|
|
|
|
68
|
|
|
$user = Auth::check() ? $request->getAttribute('user') : new DefaultUser(); |
|
69
|
|
|
|
|
70
|
|
|
/** @var SosaStatisticsService $sosa_stats_service */ |
|
71
|
|
|
$sosa_stats_service = app()->makeWith(SosaStatisticsService::class, ['tree' => $tree, 'user' => $user]); |
|
72
|
|
|
|
|
73
|
|
|
return $this->viewResponse($this->module->name() . '::statistics-page', [ |
|
74
|
|
|
'module_name' => $this->module->name(), |
|
75
|
|
|
'title' => I18N::translate('Sosa Statistics'), |
|
76
|
|
|
'tree' => $tree, |
|
77
|
|
|
'theme' => app(ModuleThemeInterface::class), |
|
78
|
|
|
'root_indi' => $sosa_stats_service->rootIndividual(), |
|
79
|
|
|
'general_stats' => $this->statisticsGeneral($sosa_stats_service), |
|
80
|
|
|
'generation_stats' => $this->statisticsByGenerations($sosa_stats_service), |
|
81
|
|
|
'generation_depth' => $sosa_stats_service->generationDepthStatsAtGeneration(1)->first(), |
|
82
|
|
|
'multiple_sosas' => $sosa_stats_service->topMultipleAncestorsWithNoTies(10)->groupBy('sosa_count'), |
|
83
|
|
|
'sosa_dispersion_g2'=> $sosa_stats_service->ancestorsDispersionForGeneration(2), |
|
84
|
|
|
'sosa_dispersion_g3'=> $sosa_stats_service->ancestorsDispersionForGeneration(3), |
|
85
|
|
|
'gen_depth_g3' => $sosa_stats_service->generationDepthStatsAtGeneration(3) |
|
86
|
|
|
]); |
|
87
|
|
|
} |
|
88
|
|
|
|
|
89
|
|
|
/** |
|
90
|
|
|
* Retrieve and compute the global statistics of ancestors for the tree. |
|
91
|
|
|
* Statistics include the number of ancestors, the number of different ancestors, pedigree collapse... |
|
92
|
|
|
* |
|
93
|
|
|
* @param SosaStatisticsService sosa_stats_service |
|
|
|
|
|
|
94
|
|
|
* @return array<string, int|float> |
|
95
|
|
|
*/ |
|
96
|
|
|
private function statisticsGeneral(SosaStatisticsService $sosa_stats_service) : array |
|
97
|
|
|
{ |
|
98
|
|
|
$ancestors_count = $sosa_stats_service->totalAncestors(); |
|
99
|
|
|
$ancestors_distinct_count = $sosa_stats_service->totalDistinctAncestors(); |
|
100
|
|
|
$individual_count = $sosa_stats_service->totalIndividuals(); |
|
101
|
|
|
|
|
102
|
|
|
return [ |
|
103
|
|
|
'sosa_count' => $ancestors_count, |
|
104
|
|
|
'distinct_count' => $ancestors_distinct_count, |
|
105
|
|
|
'sosa_rate' => $this->safeDivision($ancestors_distinct_count, $individual_count), |
|
106
|
|
|
'pedi_collapse' => 1 - $this->safeDivision($ancestors_distinct_count, $ancestors_count), |
|
107
|
|
|
'mean_gen_time' => $sosa_stats_service->meanGenerationTime() |
|
108
|
|
|
]; |
|
109
|
|
|
} |
|
110
|
|
|
|
|
111
|
|
|
/** |
|
112
|
|
|
* Retrieve and compute the statistics of ancestors by generations. |
|
113
|
|
|
* Statistics include the number of ancestors, the number of different ancestors, cumulative statistics... |
|
114
|
|
|
* |
|
115
|
|
|
* @param SosaStatisticsService $sosa_stats_service |
|
116
|
|
|
* @return array<int, array<string, int|float> |
|
|
|
|
|
|
117
|
|
|
*/ |
|
118
|
|
|
private function statisticsByGenerations(SosaStatisticsService $sosa_stats_service) : array |
|
119
|
|
|
{ |
|
120
|
|
|
$stats_by_gen = $sosa_stats_service->statisticsByGenerations(); |
|
121
|
|
|
|
|
122
|
|
|
$generation_stats = array(); |
|
123
|
|
|
|
|
124
|
|
|
foreach($stats_by_gen as $gen => $stats_gen){ |
|
125
|
|
|
$gen_diff = $gen > 1 ?$stats_gen['diffSosaTotalCount'] - $stats_by_gen[$gen - 1]['diffSosaTotalCount'] : 1; |
|
126
|
|
|
$generation_stats[$gen] = array( |
|
127
|
|
|
'gen_min_birth' => $stats_gen['firstBirth'] ?? $stats_gen['firstEstimatedBirth'], |
|
128
|
|
|
'gen_max_birth' => $stats_gen['lastBirth'] ?? $stats_gen['lastEstimatedBirth'], |
|
129
|
|
|
'theoretical' => pow(2, $gen - 1), |
|
130
|
|
|
'known' => $stats_gen['sosaCount'], |
|
131
|
|
|
'perc_known' => $this->safeDivision($stats_gen['sosaCount'], pow(2, $gen - 1)), |
|
132
|
|
|
'missing' => $gen > 1 ? 2 * $stats_by_gen[$gen - 1]['sosaCount'] - $stats_gen['sosaCount'] : 0, |
|
133
|
|
|
'perc_missing' => $gen > 1 ? 1 - $this->safeDivision($stats_gen['sosaCount'], 2 * $stats_by_gen[$gen - 1]['sosaCount']) : 0, |
|
134
|
|
|
'total_known' => $stats_gen['sosaTotalCount'], |
|
135
|
|
|
'perc_total_known' => $this->safeDivision($stats_gen['sosaTotalCount'], pow(2, $gen) - 1), |
|
136
|
|
|
'different' => $gen_diff, |
|
137
|
|
|
'perc_different' => $this->safeDivision($gen_diff, $stats_gen['sosaCount']), |
|
138
|
|
|
'total_different' => $stats_gen['diffSosaTotalCount'], |
|
139
|
|
|
'pedi_collapse' => 1 - $this->safeDivision($stats_gen['diffSosaTotalCount'], $stats_gen['sosaTotalCount']) |
|
140
|
|
|
); |
|
141
|
|
|
} |
|
142
|
|
|
|
|
143
|
|
|
return $generation_stats; |
|
144
|
|
|
} |
|
145
|
|
|
|
|
146
|
|
|
/** |
|
147
|
|
|
* Return the result of a division, and a default value if denominator is 0 |
|
148
|
|
|
* |
|
149
|
|
|
* @param int $p Numerator |
|
150
|
|
|
* @param int $q Denominator |
|
151
|
|
|
* @param float $default Value if denominator is 0 |
|
152
|
|
|
* @return float |
|
153
|
|
|
*/ |
|
154
|
|
|
private function safeDivision(int $p, int $q, float $default = 0) : float |
|
155
|
|
|
{ |
|
156
|
|
|
return $q == 0 ? $default : $p / $q; |
|
157
|
|
|
} |
|
158
|
|
|
} |
|
159
|
|
|
|
jon48 /
webtrees-lib
Loading history...
The issue could also be caused by a filter entry in the build configuration. If the path has been excluded in your configuration, e.g.
excluded_paths: ["lib/*"], you can move it to the dependency path list as follows:For further information see https://scrutinizer-ci.com/docs/tools/php/php-scrutinizer/#list-dependency-paths