doorstop.core.document.Document.config() - Code Metrics - Inspection of "Optionally add extended attr to the fingerprint" - jacebrowning/doorstop - Measure and Improve Code Quality continuously with Scrutinizer

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Pull Request — develop (#359)

unknown
created 2019-07-10 13:18 UTC
doorstop.core.document.Document.config() A

↳ Parent: doorstop.core.document
Complexity

Conditions
Size

Total Lines	4
Code Lines	3
Duplication

Lines	0
Ratio	0 %
Code Coverage

Tests	3
CRAP Score	1
Importance

Changes
Metric	Value
eloc	3
dl	0
loc	4
ccs	3
cts	3
cp	1
rs	10
c	0
b	0
f	0
cc	1
nop	1
crap	1
# SPDX-License-Identifier: LGPL-3.0-only

"""Representation of a collection of items."""

import os
from itertools import chain
from collections import OrderedDict
import re

from doorstop import common
from doorstop.common import DoorstopError, DoorstopWarning, DoorstopInfo
from doorstop.core.base import (add_document, edit_document, delete_document,
                                auto_load, auto_save,
                                BaseValidatable, BaseFileObject)
from doorstop.core.types import Prefix, UID, Level
from doorstop.core.item import Item
from doorstop import settings

log = common.logger(__name__)


class Document(BaseValidatable, BaseFileObject):  # pylint: disable=R0902
    """Represents a document directory containing an outline of items."""

    CONFIG = '.doorstop.yml'
    SKIP = '.doorstop.skip'  # indicates this document should be skipped
    ASSETS = 'assets'
    INDEX = 'index.yml'

    DEFAULT_PREFIX = Prefix('REQ')
    DEFAULT_SEP = ''
    DEFAULT_DIGITS = 3

    def __init__(self, path, root=os.getcwd(), **kwargs):
        """Initialize a document from an exiting directory.

        :param path: path to document directory
        :param root: path to root of project

        """
        super().__init__()
        # Ensure the directory is valid
        if not os.path.isfile(os.path.join(path, Document.CONFIG)):
            relpath = os.path.relpath(path, root)
            msg = "no {} in {}".format(Document.CONFIG, relpath)
            raise DoorstopError(msg)
        # Initialize the document
        self.path = path
        self.root = root
        self.tree = kwargs.get('tree')
        self.auto = kwargs.get('auto', Document.auto)
        # Set default values
        self._data['prefix'] = Document.DEFAULT_PREFIX
        self._data['sep'] = Document.DEFAULT_SEP
        self._data['digits'] = Document.DEFAULT_DIGITS
        self._data['parent'] = None  # the root document does not have a parent
        self._data['extended-reviewed'] = []
        self._items = []
        self._itered = False
        self.children = []

    def __repr__(self):
        return "Document('{}')".format(self.path)

    def __str__(self):
        if common.verbosity < common.STR_VERBOSITY:
            return self.prefix
        else:
            return "{} ({})".format(self.prefix, self.relpath)

    def __iter__(self):
        yield from self._iter()

    def __len__(self):
        return len(list(i for i in self._iter() if i.active))

    def __bool__(self):
        """Even empty documents should be considered truthy."""
        return True

    @staticmethod
    @add_document
    def new(tree, path, root, prefix, sep=None, digits=None, parent=None, auto=None):  # pylint: disable=R0913,C0301
        """Create a new document.

        :param tree: reference to tree that contains this document

        :param path: path to directory for the new document
        :param root: path to root of the project
        :param prefix: prefix for the new document

        :param sep: separator between prefix and numbers
        :param digits: number of digits for the new document
        :param parent: parent UID for the new document
        :param auto: automatically save the document

        :raises: :class:`~doorstop.common.DoorstopError` if the document
            already exists

        :return: new :class:`~doorstop.core.document.Document`

        """
        # TODO: raise a specific exception for invalid separator characters?
        assert not sep or sep in settings.SEP_CHARS
        config = os.path.join(path, Document.CONFIG)
        # Check for an existing document
        if os.path.exists(config):
            raise DoorstopError("document already exists: {}".format(path))
        # Create the document directory
        Document._create(config, name='document')
        # Initialize the document
        document = Document(path, root=root, tree=tree, auto=False)
        document.prefix = prefix if prefix is not None else document.prefix
        document.sep = sep if sep is not None else document.sep
        document.digits = digits if digits is not None else document.digits
        document.parent = parent if parent is not None else document.parent
        if auto or (auto is None and Document.auto):
            document.save()
        # Return the document
        return document

    def load(self, reload=False):
        """Load the document's properties from its file."""
        if self._loaded and not reload:
            return
        log.debug("loading {}...".format(repr(self)))
        # Read text from file
        text = self._read(self.config)
        # Parse YAML data from text
        data = self._load(text, self.config)
        # Store parsed data
        sets = data.get('settings', {})
        for key, value in sets.items():
            try:
                if key == 'prefix':
                    self._data[key] = Prefix(value)
                elif key == 'sep':
                    self._data[key] = value.strip()
                elif key == 'parent':
                    self._data[key] = value.strip()
                elif key == 'digits':
                    self._data[key] = int(value)
                elif key == 'extended-reviewed':
                    self._data[key] = sorted(set(v for v in value))
                else:
                    msg = "unexpected document setting '{}' in: {}" \
                          .format(key, self.config)
                    raise DoorstopError(msg)
            except (AttributeError, TypeError, ValueError):
                msg = "invalid value for '{}' in: {}".format(key, self.config)
                raise DoorstopError(msg)
        # Set meta attributes
        self._loaded = True
        if reload:
            list(self._iter(reload=reload))

    @edit_document
    def save(self):
        """Save the document's properties to its file."""
        log.debug("saving {}...".format(repr(self)))
        # Format the data items
        data = {}
        sets = {}
        for key, value in self._data.items():
            if key == 'prefix':
                sets[key] = str(value)
            elif key == 'sep':
                sets[key] = value
            elif key == 'digits':
                sets[key] = value
            elif key == 'parent':
                if value:
                    sets[key] = value
            elif key == 'extended-reviewed':
                if value:
                    sets[key] = value
            else:
                data[key] = value
        data['settings'] = sets
        # Dump the data to YAML
        text = self._dump(data)
        # Save the YAML to file
        self._write(text, self.config)
        # Set meta attributes
        self._loaded = False
        self.auto = True

    def _iter(self, reload=False):
        """Yield the document's items."""
        if self._itered and not reload:
            msg = "iterating document {}'s loaded items...".format(self)
            log.debug(msg)
            yield from list(self._items)
            return
        log.info("loading document {}'s items...".format(self))
        # Reload the document's item
        self._items = []
        for dirpath, dirnames, filenames in os.walk(self.path):
            for dirname in list(dirnames):
                path = os.path.join(dirpath, dirname, Document.CONFIG)
                if os.path.exists(path):
                    path = os.path.dirname(path)
                    dirnames.remove(dirname)
                    log.trace("skipped embedded document: {}".format(path))
            for filename in filenames:
                path = os.path.join(dirpath, filename)
                try:
                    item = Item(self, path, root=self.root, tree=self.tree)
                except DoorstopError:
                    pass  # skip non-item files
                else:
                    self._items.append(item)
                    if reload:
                        try:
                            item.load(reload=reload)
                        except Exception:
                            log.error("Unable to load: %s", item)
                            raise
                    if settings.CACHE_ITEMS and self.tree:
                        self.tree._item_cache[item.uid] = item  # pylint: disable=W0212
                        log.trace("cached item: {}".format(item))
        # Set meta attributes
        self._itered = True
        # Yield items
        yield from list(self._items)

    def copy_assets(self, dest):
        """Copy the contents of the assets directory."""
        if not self.assets:
            return
        common.copy_dir_contents(self.assets, dest)

    # properties #############################################################

    @property
    def config(self):
        """Get the path to the document's file."""
        return os.path.join(self.path, Document.CONFIG)

    @property
    def assets(self):
        """Get the path to the document's assets if they exist else `None`."""
        path = os.path.join(self.path, Document.ASSETS)
        return path if os.path.isdir(path) else None

    @property
    @auto_load
    def prefix(self):
        """Get the document's prefix."""
        return self._data['prefix']

    @prefix.setter
    @auto_save
    @auto_load
    def prefix(self, value):
        """Set the document's prefix."""
        self._data['prefix'] = Prefix(value)
        # TODO: should the new prefix be applied to all items?

    @property
    @auto_load
    def extended_reviewed(self):
        """Get the document's extended reviewed attribute keys."""
        return self._data['extended-reviewed']

    @property
    @auto_load
    def sep(self):
        """Get the prefix-number separator to use for new item UIDs."""
        return self._data['sep']

    @sep.setter
    @auto_save
    @auto_load
    def sep(self, value):
        """Set the prefix-number separator to use for new item UIDs."""
        # TODO: raise a specific exception for invalid separator characters?
        assert not value or value in settings.SEP_CHARS
        self._data['sep'] = value.strip()
        # TODO: should the new separator be applied to all items?

    @property
    @auto_load
    def digits(self):
        """Get the number of digits to use for new item UIDs."""
        return self._data['digits']

    @digits.setter
    @auto_save
    @auto_load
    def digits(self, value):
        """Set the number of digits to use for new item UIDs."""
        self._data['digits'] = value
        # TODO: should the new digits be applied to all items?

    @property
    @auto_load
    def parent(self):
        """Get the document's parent document prefix."""
        return self._data['parent']

    @parent.setter
    @auto_save
    @auto_load
    def parent(self, value):
        """Set the document's parent document prefix."""
        self._data['parent'] = str(value) if value else ""

    @property
    def items(self):
        """Get an ordered list of active items in the document."""
        return sorted(i for i in self._iter() if i.active)

    @property
    def depth(self):
        """Return the maximum item level depth."""
        return max(item.depth for item in self)

    @property
    def next_number(self):
        """Get the next item number for the document."""
        try:
            number = max(item.number for item in self) + 1
        except ValueError:
            number = 1
        log.debug("next number (local): {}".format(number))

        if self.tree and self.tree.request_next_number:
            remote_number = 0
            while remote_number is not None and remote_number < number:
                if remote_number:
                    log.warning("server is behind, requesting next number...")
                remote_number = self.tree.request_next_number(self.prefix)
                log.debug("next number (remote): {}".format(remote_number))
            if remote_number:
                number = remote_number

        return number

    @property
    def skip(self):
        """Indicate the document should be skipped."""
        return os.path.isfile(os.path.join(self.path, Document.SKIP))

    @property
    def index(self):
        """Get the path to the document's index if it exists else `None`."""
        path = os.path.join(self.path, Document.INDEX)
        return path if os.path.isfile(path) else None

    @index.setter
    def index(self, value):
        """Create or update the document's index."""
        if value:
            path = os.path.join(self.path, Document.INDEX)
            log.info("creating {} index...".format(self))
            common.write_lines(self._lines_index(self.items), path)

    @index.deleter
    def index(self):
        """Delete the document's index if it exists."""
        log.info("deleting {} index...".format(self))
        common.delete(self.index)

    # actions ################################################################

    # decorators are applied to methods in the associated classes
    def add_item(self, number=None, level=None, reorder=True):
        """Create a new item for the document and return it.

        :param number: desired item number
        :param level: desired item level
        :param reorder: update levels of document items

        :return: added :class:`~doorstop.core.item.Item`

        """
        number = max(number or 0, self.next_number)
        log.debug("next number: {}".format(number))
        try:
            last = self.items[-1]
        except IndexError:
            next_level = level
        else:
            if level:
                next_level = level
            elif last.level.heading:
                next_level = last.level >> 1
                next_level.heading = False
            else:
                next_level = last.level + 1
        log.debug("next level: {}".format(next_level))
        uid = UID(self.prefix, self.sep, number, self.digits)
        item = Item.new(self.tree, self,
                        self.path, self.root, uid,
                        level=next_level)
        if level and reorder:
            self.reorder(keep=item)
        return item

    # decorators are applied to methods in the associated classes
    def remove_item(self, value, reorder=True):
        """Remove an item by its UID.

        :param value: item or UID
        :param reorder: update levels of document items

        :raises: :class:`~doorstop.common.DoorstopError` if the item
            cannot be found

        :return: removed :class:`~doorstop.core.item.Item`

        """
        uid = UID(value)
        item = self.find_item(uid)
        item.delete()
        if reorder:
            self.reorder()
        return item

    # decorators are applied to methods in the associated classes
    def reorder(self, manual=True, automatic=True, start=None, keep=None,
                _items=None):
        """Reorder a document's items.

        Two methods are using to create the outline order:

        - manual: specify the order using an updated index file
        - automatic: shift duplicate levels and compress gaps

        :param manual: enable manual ordering using the index (if one exists)

        :param automatic: enable automatic ordering (after manual ordering)
        :param start: level to start numbering (None = use current start)
        :param keep: item or UID to keep over duplicates

        """
        # Reorder manually
        if manual and self.index:
            log.info("reordering {} from index...".format(self))
            self._reorder_from_index(self, self.index)
            del self.index
        # Reorder automatically
        if automatic:
            log.info("reordering {} automatically...".format(self))
            items = _items or self.items
            keep = self.find_item(keep) if keep else None
            self._reorder_automatic(items, start=start, keep=keep)

    @staticmethod
    def _lines_index(items):
        """Generate (pseudo) YAML lines for the document index."""
        yield '#' * settings.MAX_LINE_LENGTH
        yield '# THIS TEMPORARY FILE WILL BE DELETED AFTER DOCUMENT REORDERING'
        yield '# MANUALLY INDENT, DEDENT, & MOVE ITEMS TO THEIR DESIRED LEVEL'
        yield '# A NEW ITEM WILL BE ADDED FOR ANY UNKNOWN IDS, i.e. - new: '
        yield '# THE COMMENT WILL BE USED AS THE ITEM TEXT FOR NEW ITEMS'
        yield '# CHANGES WILL BE REFLECTED IN THE ITEM FILES AFTER CONFIRMATION'
        yield '#' * settings.MAX_LINE_LENGTH
        yield ''
        yield "initial: {}".format(items[0].level if items else 1.0)
        yield "outline:"
        for item in items:
            space = "    " * item.depth
            lines = item.text.strip().splitlines()
            comment = lines[0] if lines else ""
            line = space + "- {u}: # {c}".format(u=item.uid, c=comment)
            if len(line) > settings.MAX_LINE_LENGTH:
                line = line[:settings.MAX_LINE_LENGTH - 3] + '...'
            yield line

    @staticmethod
    def _read_index(path):
        """Load the index, converting comments to text entries for each item."""
        with open(path, 'r', encoding='utf-8') as stream:
            text = stream.read()
        yaml_text = []
        for line in text.split('\n'):
            m = re.search(r'(\s+)(- [\w\d-]+\s*): # (.+)$', line)
            if m:
                prefix = m.group(1)
                uid = m.group(2)
                item_text = m.group(3).replace('"', '\\"')
                yaml_text.append('{p}{u}:'.format(p=prefix, u=uid))
                yaml_text.append('    {p}- text: "{t}"'.format(p=prefix, t=item_text))
            else:
                yaml_text.append(line)
        return common.load_yaml('\n'.join(yaml_text), path)

    @staticmethod
    def _reorder_from_index(document, path):
        """Reorder a document's item from the index."""
        data = document._read_index(path)  # pylint: disable=protected-access
        # Read updated values
        initial = data.get('initial', 1.0)
        outline = data.get('outline', [])
        # Update levels
        level = Level(initial)
        ids_after_reorder = []
        Document._reorder_section(outline, level, document, ids_after_reorder)
        for item in document.items:
            if item.uid not in ids_after_reorder:
                log.info('Deleting %s', item.uid)
                item.delete()

    @staticmethod
    def _reorder_section(section, level, document, list_of_ids):
        """Recursive function to reorder a section of an outline.

        :param section: recursive `list` of `dict` loaded from document index
        :param level: current :class:`~doorstop.core.types.Level`
        :param document: :class:`~doorstop.core.document.Document` to order

        """
        if isinstance(section, dict):  # a section

            # Get the item and subsection
            uid = list(section.keys())[0]
            if uid == 'text':
                return
            subsection = section[uid]

            # An item is a header if it has a subsection
            level.heading = False
            item_text = ''
            if isinstance(subsection, str):
                item_text = subsection
            elif isinstance(subsection, list):
                if 'text' in subsection[0]:
                    item_text = subsection[0]['text']
                    if len(subsection) > 1:
                        level.heading = True

            try:
                item = document.find_item(uid)
                item.level = level
                log.info("Found ({}): {}".format(uid, level))
                list_of_ids.append(uid)
            except DoorstopError:
                item = document.add_item(level=level, reorder=False)
                list_of_ids.append(item.uid)
                if level.heading:
                    item.normative = False
                item.text = item_text
                log.info("Created ({}): {}".format(item.uid, level))

            # Process the heading's subsection
            if subsection:
                Document._reorder_section(subsection, level >> 1, document, list_of_ids)

        elif isinstance(section, list):  # a list of sections

            # Process each subsection
            for index, subsection in enumerate(section):
                Document._reorder_section(subsection, level + index, document, list_of_ids)

    @staticmethod
    def _reorder_automatic(items, start=None, keep=None):
        """Reorder a document's items automatically.

        :param items: items to reorder
        :param start: level to start numbering (None = use current start)
        :param keep: item to keep over duplicates

        """
        nlevel = plevel = None
        for clevel, item in Document._items_by_level(items, keep=keep):
            log.debug("current level: {}".format(clevel))
            # Determine the next level
            if not nlevel:
                # Use the specified or current starting level
                nlevel = Level(start) if start else clevel
                nlevel.heading = clevel.heading
                log.debug("next level (start): {}".format(nlevel))
            else:
                # Adjust the next level to be the same depth
                if len(clevel) > len(nlevel):
                    nlevel >>= len(clevel) - len(nlevel)
                    log.debug("matched current indent: {}".format(nlevel))
                elif len(clevel) < len(nlevel):
                    nlevel <<= len(nlevel) - len(clevel)
                    # nlevel += 1
                    log.debug("matched current dedent: {}".format(nlevel))
                nlevel.heading = clevel.heading
                # Check for a level jump
                _size = min(len(clevel.value), len(plevel.value))
                for index in range(max(_size - 1, 1)):
                    if clevel.value[index] > plevel.value[index]:
                        nlevel <<= len(nlevel) - 1 - index
                        nlevel += 1
                        nlevel >>= len(clevel) - len(nlevel)
                        msg = "next level (jump): {}".format(nlevel)
                        log.debug(msg)
                        break
                # Check for a normal increment
                else:
                    if len(nlevel) <= len(plevel):
                        nlevel += 1
                        msg = "next level (increment): {}".format(nlevel)
                        log.debug(msg)
                    else:
                        msg = "next level (indent/dedent): {}".format(nlevel)
                        log.debug(msg)
            # Apply the next level
            if clevel == nlevel:
                log.info("{}: {}".format(item, clevel))
            else:
                log.info("{}: {} to {}".format(item, clevel, nlevel))
            item.level = nlevel.copy()
            # Save the current level as the previous level
            plevel = clevel.copy()

    @staticmethod
    def _items_by_level(items, keep=None):
        """Iterate through items by level with the kept item first."""
        # Collect levels
        levels = OrderedDict()
        for item in items:
            if item.level in levels:
                levels[item.level].append(item)
            else:
                levels[item.level] = [item]
        # Reorder levels
        for level, items_at_level in levels.items():
            # Reorder items at this level
            if keep in items_at_level:
                # move the kept item to the front of the list
                log.debug("keeping {} level over duplicates".format(keep))
                items_at_level.remove(keep)
                items_at_level.insert(0, keep)
            for item in items_at_level:
                yield level, item

    def find_item(self, value, _kind=''):
        """Return an item by its UID.

        :param value: item or UID

        :raises: :class:`~doorstop.common.DoorstopError` if the item
            cannot be found

        :return: matching :class:`~doorstop.core.item.Item`

        """
        uid = UID(value)
        for item in self:
            if item.uid == uid:
                if item.active:
                    return item
                else:
                    log.trace("item is inactive: {}".format(item))

        raise DoorstopError("no matching{} UID: {}".format(_kind, uid))

    def get_issues(self, skip=None, document_hook=None, item_hook=None):  # pylint: disable=unused-argument
        """Yield all the document's issues.

        :param skip: list of document prefixes to skip
        :param item_hook: function to call for custom item validation

        :return: generator of :class:`~doorstop.common.DoorstopError`,
                              :class:`~doorstop.common.DoorstopWarning`,
                              :class:`~doorstop.common.DoorstopInfo`

        """
        assert document_hook is None
        skip = [] if skip is None else skip
        hook = item_hook if item_hook else lambda **kwargs: []

        if self.prefix in skip:
            log.info("skipping document %s...", self)
            return
        else:
            log.info("checking document %s...", self)

        # Check for items
        items = self.items
        if not items:
            yield DoorstopWarning("no items")
            return

        # Reorder or check item levels
        if settings.REORDER:
            self.reorder(_items=items)
        elif settings.CHECK_LEVELS:
            yield from self._get_issues_level(items)

        # Check each item
        for item in items:

            # Check item
            for issue in chain(hook(item=item, document=self, tree=self.tree),
                               item.get_issues(skip=skip)):

                # Prepend the item's UID to yielded exceptions
                if isinstance(issue, Exception):
                    yield type(issue)("{}: {}".format(item.uid, issue))

    @staticmethod
    def _get_issues_level(items):
        """Yield all the document's issues related to item level."""
        prev = items[0] if items else None
        for item in items[1:]:
            puid = prev.uid
            plev = prev.level
            nuid = item.uid
            nlev = item.level
            log.debug("checking level {} to {}...".format(plev, nlev))
            # Duplicate level
            if plev == nlev:
                uids = sorted((puid, nuid))
                msg = "duplicate level: {} ({}, {})".format(plev, *uids)
                yield DoorstopWarning(msg)
            # Skipped level
            length = min(len(plev.value), len(nlev.value))
            for index in range(length):
                # Types of skipped levels:
                #         1. over: 1.0 --> 1.2
                #         2. out: 1.1 --> 3.0
                if (nlev.value[index] - plev.value[index] > 1 or
                        # 3. over and out: 1.1 --> 2.2
                        (plev.value[index] != nlev.value[index] and
                         index + 1 < length and
                         nlev.value[index + 1] not in (0, 1))):
                    msg = "skipped level: {} ({}), {} ({})".format(plev, puid,
                                                                   nlev, nuid)
                    yield DoorstopInfo(msg)
                    break
            prev = item

    @delete_document
    def delete(self, path=None):
        """Delete the document and its items."""
        for item in self:
            item.delete()
        # the document is deleted in the decorated method

jacebrowning / doorstop

Pull Request — develop (#359)

doorstop.core.document.Document.config() A

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