| 1 |  |  | from os.path import basename | 
            
                                                                                                            
                            
            
                                    
            
            
                | 2 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 3 |  |  | class Diff(object): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 4 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 5 |  |  |     NCHARSCOL = 20 | 
            
                                                                                                            
                            
            
                                    
            
            
                | 6 |  |  |     defaultIgnore = ['_id'] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 7 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 8 |  |  |     def __init__(self, file1, file2): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 9 |  |  |         self.file1 = file1 | 
            
                                                                                                            
                            
            
                                    
            
            
                | 10 |  |  |         self.file2 = file2 | 
            
                                                                                                            
                            
            
                                    
            
            
                | 11 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 12 |  |  |     def getDifferences(self, ignore=None, select=None): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 13 |  |  |         assert isinstance(ignore, list) or ignore is None | 
            
                                                                                                            
                            
            
                                    
            
            
                | 14 |  |  |         if ignore is None: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 15 |  |  |             ignore = [] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 16 |  |  |         ignore += self.defaultIgnore | 
            
                                                                                                            
                            
            
                                    
            
            
                | 17 |  |  |         prov1 = self.file1.getProvenance() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 18 |  |  |         prov2 = self.file2.getProvenance() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 19 |  |  |         if select: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 20 |  |  |             allkeys = set(prov1.keys()+prov2.keys()) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 21 |  |  |             ignore = [k for k in allkeys if k not in select] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 22 |  |  |         diffDict = {} | 
            
                                                                                                            
                            
            
                                    
            
            
                | 23 |  |  |         for k in set(prov1.keys()).difference(prov2.keys()): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 24 |  |  |             if k not in ignore: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 25 |  |  |                 diffDict[k] = 'missingIn2' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 26 |  |  |         for k in set(prov2.keys()).difference(prov1.keys()): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 27 |  |  |             if k not in ignore: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 28 |  |  |                 diffDict[k] = 'missingIn1' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 29 |  |  |         for k in set(prov1.keys()).intersection(prov2.keys()): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 30 |  |  |             if k not in ignore: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 31 |  |  |                 if prov1[k] != prov2[k]: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 32 |  |  |                     diffDict[k] = 'value' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 33 |  |  |         return diffDict | 
            
                                                                                                            
                            
            
                                    
            
            
                | 34 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 35 |  |  |     def getDifferenceString(self, ignore=None, select=None): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 36 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 37 |  |  |         differences = self.getDifferences(ignore, select) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 38 |  |  |         if not differences: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 39 |  |  |             return '' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 40 |  |  |         name1 = basename(str(self.file1.location)) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 41 |  |  |         name2 = basename(str(self.file2.location)) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 42 |  |  |         prov1 = self.file1.getProvenance() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 43 |  |  |         prov2 = self.file2.getProvenance() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 44 |  |  |         def row(*vals): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 45 |  |  |             cells = [c[:self.NCHARSCOL] for c in vals] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 46 |  |  |             cells = [c.ljust(self.NCHARSCOL) for c in cells] | 
            
                                                                                                            
                            
            
                                    
            
            
                | 47 |  |  |             return ' '.join(cells)+'\n' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 48 |  |  |         diffStr = 'Differences:\n' | 
            
                                                                                                            
                            
            
                                    
            
            
                | 49 |  |  |         diffStr += row('', name1, name2) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 50 |  |  |         for field, status in differences.items(): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 51 |  |  |             val1 = prov1.get(field, 'n/a') | 
            
                                                                                                            
                            
            
                                    
            
            
                | 52 |  |  |             val2 = prov2.get(field, 'n/a') | 
            
                                                                                                            
                            
            
                                    
            
            
                | 53 |  |  |             diffStr += row(field, str(val1), str(val2)) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 54 |  |  |         return diffStr | 
            
                                                                                                            
                            
            
                                    
            
            
                | 55 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 56 |  |  |     def areEqual(self, ignore=None, select=None): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 57 |  |  |         differences = self.getDifferences(ignore, select) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 58 |  |  |         return len(differences) == 0 | 
            
                                                                                                            
                                                                
            
                                    
            
            
                | 59 |  |  |  | 
            
                                                                        
                            
            
                                    
            
            
                | 60 |  |  |     def areEqualProtocol(self): | 
            
                                                                        
                            
            
                                    
            
            
                | 61 |  |  |         protocol = self.file1.getProtocolFields() | 
            
                                                                        
                            
            
                                    
            
            
                | 62 |  |  |         differences = self.getDifferences(select=protocol) | 
            
                                                                        
                            
            
                                    
            
            
                | 63 |  |  |         return len(differences) == 0 | 
            
                                                                                                            
                            
            
                                    
            
            
                | 64 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 65 |  |  |     def assertEqual(self, ignore=None, select=None): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 66 |  |  |         differences = self.getDifferenceString(ignore, select) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 67 |  |  |         if differences: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 68 |  |  |             raise AssertionError(differences) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 69 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 70 |  |  |     def assertEqualProtocol(self): | 
            
                                                                                                            
                            
            
                                    
            
            
                | 71 |  |  |         protocol = self.file1.getProtocolFields() | 
            
                                                                                                            
                            
            
                                    
            
            
                | 72 |  |  |         differences = self.getDifferenceString(select=protocol) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 73 |  |  |         if differences: | 
            
                                                                                                            
                            
            
                                    
            
            
                | 74 |  |  |             raise AssertionError(differences) | 
            
                                                                                                            
                            
            
                                    
            
            
                | 75 |  |  |  | 
            
                                                                                                            
                            
            
                                    
            
            
                | 76 |  |  |     def __str__(self): | 
            
                                                                                                            
                                                                
            
                                    
            
            
                | 77 |  |  |         return self.getDifferenceString() | 
            
                                                        
            
                                    
            
            
                | 78 |  |  |  |