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import unittest |
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from mock import Mock |
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from datetime import datetime, timedelta |
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from tests.test_basefile import BaseFileTests |
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class CNTTests(BaseFileTests): |
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def setUp(self): |
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super(CNTTests, self).setUp() |
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self.filesys.open.return_value = MockFile() |
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from niprov.cnt import NeuroscanFile |
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self.constructor = NeuroscanFile |
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self.file = NeuroscanFile(self.path, dependencies=self.dependencies) |
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def test_Inspect_parses_experimental_basics(self): |
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out = self.file.inspect() |
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self.assertEqual(out['subject'], 'Jane Doe') |
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self.assertEqual(out['dimensions'], [32, 2080]) |
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self.assertEqual(out['acquired'], datetime(2015,3,9,13,7,3)) |
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self.assertEqual(out['sampling-frequency'], 1000) |
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self.assertEqual(out['duration'], timedelta(seconds=2080/1000.)) |
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def test_Determines_modality(self): |
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out = self.file.inspect() |
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self.assertEqual(out['modality'], 'EEG') |
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def test_Preserves_modality_if_inherited(self): |
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pass # Doesn't have to preserve |
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class MockFile(object): |
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def __init__(self): |
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self.cursor = -1 |
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def __enter__(self): |
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return self |
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def __exit__(self, *args, **kwargs): |
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pass |
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def read(self, nbytes): |
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self.cursor = self.cursor + 1 |
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return _data[self.cursor] |
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_data = [ |
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None, #h.rev = self._fread(fid,12,'char') |
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None, #h.nextfile = self._fread(fid,1,'long') |
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None, #h.prevfile = self._fread(fid,1,'ulong') |
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None, #h.type = self._fread(fid,1,'char') |
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None, #h.id = self._fread(fid,20,'char') |
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None, #h.oper = self._fread(fid,20,'char') |
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None, #h.doctor = self._fread(fid,20,'char') |
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None, #h.referral = self._fread(fid,20,'char') |
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None, #h.hospital = self._fread(fid,20,'char') |
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#h.patient = self._fread(fid,20,'char') |
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b'Jane Doe\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00', |
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None, #h.age = self._fread(fid,1,'short') |
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None, #h.sex = self._fread(fid,1,'char') |
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None, #h.hand = self._fread(fid,1,'char') |
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None, #h.med = self._fread(fid,20, 'char') |
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None, #h.category = self._fread(fid,20, 'char') |
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None, #h.state = self._fread(fid,20, 'char') |
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None, #h.label = self._fread(fid,20, 'char') |
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b'09/03/15' , #h.date = self._fread(fid,10, 'char') |
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b'13:07:03', #h.time = self._fread(fid,12, 'char') |
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None, #h.mean_age = self._fread(fid,1,'float') |
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None, #h.stdev = self._fread(fid,1,'float') |
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None, #h.n = self._fread(fid,1,'short') |
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None, #h.compfile = self._fread(fid,38,'char') |
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None, #h.spectwincomp = self._fread(fid,1,'float') |
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None, #h.meanaccuracy = self._fread(fid,1,'float') |
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None, #h.meanlatency = self._fread(fid,1,'float') |
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None, #h.sortfile = self._fread(fid,46,'char') |
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None, #h.numevents = self._fread(fid,1,'int') |
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None, #h.compoper = self._fread(fid,1,'char') |
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None, #h.avgmode = self._fread(fid,1,'char') |
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None, #h.review = self._fread(fid,1,'char') |
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None, #h.nsweeps = self._fread(fid,1,'ushort') |
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None, #h.compsweeps = self._fread(fid,1,'ushort') |
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None, #h.acceptcnt = self._fread(fid,1,'ushort') |
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None, #h.rejectcnt = self._fread(fid,1,'ushort') |
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None, #h.pnts = self._fread(fid,1,'ushort') |
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b' \x00', #h.nchannels = self._fread(fid,1,'ushort') |
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None, #h.avgupdate = self._fread(fid,1,'ushort') |
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None, #h.domain = self._fread(fid,1,'char') |
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None, #h.variance = self._fread(fid,1,'char') |
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b'\xe8\x03', #h.rate = self._fread(fid,1,'ushort') |
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None, #h.scale = self._fread(fid,1,'double') |
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None, #h.veogcorrect = self._fread(fid,1,'char') |
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None, #h.heogcorrect = self._fread(fid,1,'char') |
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None, #h.aux1correct = self._fread(fid,1,'char') |
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None, #h.aux2correct = self._fread(fid,1,'char') |
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None, #h.veogtrig = self._fread(fid,1,'float') |
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None, #h.heogtrig = self._fread(fid,1,'float') |
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None, #h.aux1trig = self._fread(fid,1,'float') |
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None, #h.aux2trig = self._fread(fid,1,'float') |
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None, #h.heogchnl = self._fread(fid,1,'short') |
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None, #h.veogchnl = self._fread(fid,1,'short') |
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None, #h.aux1chnl = self._fread(fid,1,'short') |
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None, #h.aux2chnl = self._fread(fid,1,'short') |
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None, #h.veogdir = self._fread(fid,1,'char') |
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None, #h.heogdir = self._fread(fid,1,'char') |
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None, #h.aux1dir = self._fread(fid,1,'char') |
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None, #h.aux2dir = self._fread(fid,1,'char') |
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None, #h.veog_n = self._fread(fid,1,'short') |
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None, #h.heog_n = self._fread(fid,1,'short') |
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None, #h.aux1_n = self._fread(fid,1,'short') |
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None, #h.aux2_n = self._fread(fid,1,'short') |
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None, #h.veogmaxcnt = self._fread(fid,1,'short') |
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None, #h.heogmaxcnt = self._fread(fid,1,'short') |
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None, #h.aux1maxcnt = self._fread(fid,1,'short') |
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None, #h.aux2maxcnt = self._fread(fid,1,'short') |
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None, #h.veogmethod = self._fread(fid,1,'char') |
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None, #h.heogmethod = self._fread(fid,1,'char') |
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None, #h.aux1method = self._fread(fid,1,'char') |
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None, #h.aux2method = self._fread(fid,1,'char') |
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None, #h.ampsensitivity = self._fread(fid,1,'float') |
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None, #h.lowpass = self._fread(fid,1,'char') |
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None, #h.highpass = self._fread(fid,1,'char') |
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None, #h.notch = self._fread(fid,1,'char') |
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None, #h.autoclipadd = self._fread(fid,1,'char') |
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None, #h.baseline = self._fread(fid,1,'char') |
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None, #h.offstart = self._fread(fid,1,'float') |
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None, #h.offstop = self._fread(fid,1,'float') |
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None, #h.reject = self._fread(fid,1,'char') |
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None, #h.rejstart = self._fread(fid,1,'float') |
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None, #h.rejstop = self._fread(fid,1,'float') |
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None, #h.rejmin = self._fread(fid,1,'float') |
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None, #h.rejmax = self._fread(fid,1,'float') |
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None, #h.trigtype = self._fread(fid,1,'char') |
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None, #h.trigval = self._fread(fid,1,'float') |
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None, #h.trigchnl = self._fread(fid,1,'char') |
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None, #h.trigmask = self._fread(fid,1,'short') |
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None, #h.trigisi = self._fread(fid,1,'float') |
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None, #h.trigmin = self._fread(fid,1,'float') |
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None, #h.trigmax = self._fread(fid,1,'float') |
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None, #h.trigdir = self._fread(fid,1,'char') |
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None, #h.autoscale = self._fread(fid,1,'char') |
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None, #h.n2 = self._fread(fid,1,'short') |
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None, #h.dir = self._fread(fid,1,'char') |
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None, #h.dispmin = self._fread(fid,1,'float') |
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None, #h.dispmax = self._fread(fid,1,'float') |
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None, #h.xmin = self._fread(fid,1,'float') |
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None, #h.xmax = self._fread(fid,1,'float') |
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None, #h.automin = self._fread(fid,1,'float') |
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None, #h.automax = self._fread(fid,1,'float') |
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None, #h.zmin = self._fread(fid,1,'float') |
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None, #h.zmax = self._fread(fid,1,'float') |
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None, #h.lowcut = self._fread(fid,1,'float') |
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None, #h.highcut = self._fread(fid,1,'float') |
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None, #h.common = self._fread(fid,1,'char') |
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None, #h.savemode = self._fread(fid,1,'char') |
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None, #h.manmode = self._fread(fid,1,'char') |
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None, #h.ref = self._fread(fid,10,'char') |
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None, #h.rectify = self._fread(fid,1,'char') |
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None, #h.displayxmin = self._fread(fid,1,'float') |
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None, #h.displayxmax = self._fread(fid,1,'float') |
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None, #h.phase = self._fread(fid,1,'char') |
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None, #h.screen = self._fread(fid,16,'char') |
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None, #h.calmode = self._fread(fid,1,'short') |
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None, #h.calmethod = self._fread(fid,1,'short') |
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None, #h.calupdate = self._fread(fid,1,'short') |
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None, #h.calbaseline = self._fread(fid,1,'short') |
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None, #h.calsweeps = self._fread(fid,1,'short') |
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None, #h.calattenuator = self._fread(fid,1,'float') |
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None, #h.calpulsevolt = self._fread(fid,1,'float') |
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None, #h.calpulsestart = self._fread(fid,1,'float') |
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None, #h.calpulsestop = self._fread(fid,1,'float') |
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None, #h.calfreq = self._fread(fid,1,'float') |
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None, #h.taskfile = self._fread(fid,34,'char') |
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None, #h.seqfile = self._fread(fid,34,'char') |
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None, #h.spectmethod = self._fread(fid,1,'char') |
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None, #h.spectscaling = self._fread(fid,1,'char') |
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None, #h.spectwindow = self._fread(fid,1,'char') |
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None, #h.spectwinlength = self._fread(fid,1,'float') |
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None, #h.spectorder = self._fread(fid,1,'char') |
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None, #h.notchfilter = self._fread(fid,1,'char') |
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None, #h.headgain = self._fread(fid,1,'short') |
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None, #h.additionalfiles = self._fread(fid,1,'int') |
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None, #h.unused = self._fread(fid,5,'char') |
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None, #h.fspstopmethod = self._fread(fid,1,'short') |
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None, #h.fspstopmode = self._fread(fid,1,'short') |
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None, #h.fspfvalue = self._fread(fid,1,'float') |
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None, #h.fsppoint = self._fread(fid,1,'short') |
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None, #h.fspblocksize = self._fread(fid,1,'short') |
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None, #h.fspp1 = self._fread(fid,1,'ushort') |
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None, #h.fspp2 = self._fread(fid,1,'ushort') |
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None, #h.fspalpha = self._fread(fid,1,'float') |
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None, #h.fspnoise = self._fread(fid,1,'float') |
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None, #h.fspv1 = self._fread(fid,1,'short') |
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None, #h.montage = self._fread(fid,40,'char') |
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None, #h.eventfile = self._fread(fid,40,'char') |
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None, #h.fratio = self._fread(fid,1,'float') |
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None, #h.minor_rev = self._fread(fid,1,'char') |
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198
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None, #h.eegupdate = self._fread(fid,1,'short') |
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199
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None, #h.compressed = self._fread(fid,1,'char') |
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None, #h.xscale = self._fread(fid,1,'float') |
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None, #h.yscale = self._fread(fid,1,'float') |
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None, #h.xsize = self._fread(fid,1,'float') |
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203
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None, #h.ysize = self._fread(fid,1,'float') |
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204
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None, #h.acmode = self._fread(fid,1,'char') |
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205
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None, #h.commonchnl = self._fread(fid,1,'uchar') |
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206
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None, #h.xtics = self._fread(fid,1,'char') |
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207
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None, #h.xrange = self._fread(fid,1,'char') |
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None, #h.ytics = self._fread(fid,1,'char') |
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None, #h.yrange = self._fread(fid,1,'char') |
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None, #h.xscalevalue = self._fread(fid,1,'float') |
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None, #h.xscaleinterval = self._fread(fid,1,'float') |
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None, #h.yscalevalue = self._fread(fid,1,'float') |
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None, #h.yscaleinterval = self._fread(fid,1,'float') |
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None, #h.scaletoolx1 = self._fread(fid,1,'float') |
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215
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None, #h.scaletooly1 = self._fread(fid,1,'float') |
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216
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None, #h.scaletoolx2 = self._fread(fid,1,'float') |
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None, #h.scaletooly2 = self._fread(fid,1,'float') |
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None, #h.port = self._fread(fid,1,'short') |
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b' \x08\x00\x00', #h.numsamples = self._fread(fid,1,'ulong') |
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None, #h.filterflag = self._fread(fid,1,'char') |
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None, #h.lowcutoff = self._fread(fid,1,'float') |
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None, #h.lowpoles = self._fread(fid,1,'short') |
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None, #h.highcutoff = self._fread(fid,1,'float') |
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None, #h.highpoles = self._fread(fid,1,'short') |
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None, #h.filtertype = self._fread(fid,1,'char') |
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None, #h.filterdomain = self._fread(fid,1,'char') |
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None, #h.snrflag = self._fread(fid,1,'char') |
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None, #h.coherenceflag = self._fread(fid,1,'char') |
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229
|
|
|
None, #h.continuoustype = self._fread(fid,1,'char') |
|
230
|
|
|
None, #h.eventtablepos = self._fread(fid,1,'ulong') |
|
231
|
|
|
None, #h.continuousseconds = self._fread(fid,1,'float') |
|
232
|
|
|
None, #h.channeloffset = self._fread(fid,1,'long') |
|
233
|
|
|
None, #h.autocorrectflag = self._fread(fid,1,'char') |
|
234
|
|
|
None, #h.dcthreshold = self._fread(fid,1,'uchar') |
|
235
|
|
|
] |
|
236
|
|
|
|
ilogue /
niprov
