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@@ 56-79 (lines=24) @@
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'Signal Space Separation', |
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fnames['raw']['s2'][1], provenance = {'mnefun':{}}) |
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@unittest.skip("Needs to be fixed for new mnefun support code.") |
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def test_Logs_ssp_operation(self): |
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import niprov.mnefunsupport |
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class MockParams(object): |
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pass |
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params = MockParams() |
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params.subjects = ['s1','s2'] |
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fnames = {'pca':{'s1':['subj 1 pca file 1','subj 1 pca file 2'], |
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's2':['subj 2 pca file 1','subj 2 pca file 2']}, |
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'sss': {'s1':['subj 1 sss file 1','subj 1 sss file 2'], |
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's2':['subj 2 sss file 1','subj 2 sss file 2']}} |
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self.libs.mnefun.get_raw_fnames.side_effect = lambda p, s, t: fnames[t][s] |
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def apply_preprocessing_combined(): |
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pass |
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with patch('niprov.mnefunsupport.log') as log: |
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niprov.mnefunsupport.handler('Apply SSP vectors and filtering.', |
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apply_preprocessing_combined, None, params, |
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dependencies=self.dependencies) |
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log.assert_any_call(fnames['pca']['s1'][0], |
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'Signal Space Projection', |
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fnames['sss']['s1'][0], provenance = {'mnefun':{}}) |
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log.assert_any_call(fnames['pca']['s2'][1], |
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'Signal Space Projection', |
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fnames['sss']['s2'][1], provenance = {'mnefun':{}}) |
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@unittest.skip("Needs to be fixed for new mnefun support code.") |
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def test_Logs_epoch_operation(self): |
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@@ 32-54 (lines=23) @@
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discover.assert_any_call('/root/janedoe/rawdir') |
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self.listener.mnefunEventReceived.assert_called_with('fetch_raw_files') |
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@unittest.skip("Needs to be fixed for new mnefun support code.") |
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def test_Logs_sss_operation(self): |
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import niprov.mnefunsupport |
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class MockParams(object): |
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pass |
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params = MockParams() |
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params.subjects = ['s1','s2'] |
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fnames = {'raw':{'s1':['subj 1 raw file 1','subj 1 raw file 2'], |
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's2':['subj 2 raw file 1','subj 2 raw file 2']}, |
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'sss': {'s1':['subj 1 sss file 1','subj 1 sss file 2'], |
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's2':['subj 2 sss file 1','subj 2 sss file 2']}} |
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self.libs.mnefun.get_raw_fnames.side_effect = lambda p, s, t: fnames[t][s] |
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def fetch_sss_files(): |
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pass |
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with patch('niprov.mnefunsupport.log') as log: |
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niprov.mnefunsupport.handler('Pulling SSS files from remote workstation', |
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fetch_sss_files, None, params, dependencies=self.dependencies) |
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log.assert_any_call(fnames['sss']['s1'][0], |
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'Signal Space Separation', |
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fnames['raw']['s1'][0], provenance = {'mnefun':{}}) |
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log.assert_any_call(fnames['sss']['s2'][1], |
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'Signal Space Separation', |
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fnames['raw']['s2'][1], provenance = {'mnefun':{}}) |
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@unittest.skip("Needs to be fixed for new mnefun support code.") |
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def test_Logs_ssp_operation(self): |
ilogue /
niprov
