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Push — master ( 4133e1...824ae8 )
by Fernando
06:45
created

torchio.data.orientation   A

↳ Parent: Project

Complexity

Total Complexity 2

Size/Duplication

Total Lines 25
Duplicated Lines 0 %

Importance

Changes 0
Metric Value
eloc 16
dl 0
loc 25
rs 10
c 0
b 0
f 0
wmc 2

1 Function

Rating   Name   Duplication   Size   Complexity  
A name_dimensions() 0 6 2
1 
import warnings
2 
import nibabel as nib
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AXCODES_TO_WORDS = {

            


            
                                                        
            
                                    
            
            

                
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    'L': 'left',

            


            
                                                        
            
                                    
            
            

                
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    'R': 'right',

            


            
                                                        
            
                                    
            
            

                
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    'P': 'posterior',

            


            
                                                        
            
                                    
            
            

                
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    'A': 'anterior',

            


            
                                                        
            
                                    
            
            

                
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    'I': 'inferior',

            


            
                                                        
            
                                    
            
            

                
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    'S': 'superior',

            


            
                                                        
            
                                    
            
            

                
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    # 'C': 'caudal',

            


            
                                                        
            
                                    
            
            

                
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    # 'R': 'rostral',  # conflic with right

            


            
                                                        
            
                                    
            
            

                
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    # 'D': 'dorsal',

            


            
                                                        
            
                                    
            
            

                
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    # 'V': 'ventral',

            


            
                                                        
            
                                    
            
            

                
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}

            


            
                                                        
            
                                    
            
            

                
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def name_dimensions(tensor, affine):

            


            
                                                        
            
                                    
            
            

                
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    axcodes = nib.aff2axcodes(affine)

            


            
                                                        
            
                                    
            
            

                
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    names = [AXCODES_TO_WORDS[axcode] for axcode in axcodes]

            


            
                                                        
            
                                    
            
            

                
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    with warnings.catch_warnings():

            


            
                                                        
            
                                    
            
            

                
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        warnings.simplefilter('ignore', UserWarning)

            


            
                                                        
            
                                    
            
            

                
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        tensor.rename_(*names)

            


            
                                                        
            
                                    
            
            

                
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