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<?php |
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/** |
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* neuralyzer : Data Anonymization Library and CLI Tool |
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* |
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* PHP Version 7.1 |
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* |
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* @author Emmanuel Dyan |
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* @author Rémi Sauvat |
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* @copyright 2018 Emmanuel Dyan |
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* |
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* @package edyan/neuralyzer |
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* |
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* @license GNU General Public License v2.0 |
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* |
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* @link https://github.com/edyan/neuralyzer |
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*/ |
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namespace Edyan\Neuralyzer\Anonymizer; |
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use Doctrine\DBAL\Connection; |
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use Doctrine\DBAL\Configuration as DbalConfiguration; |
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use Doctrine\DBAL\DriverManager as DbalDriverManager; |
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use Doctrine\DBAL\Query\QueryBuilder; |
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use Edyan\Neuralyzer\Exception\NeuralizerException; |
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use Edyan\Neuralyzer\Utils\CSVWriter; |
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use Edyan\Neuralyzer\Utils\DBUtils; |
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/** |
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* Implement AbstractAnonymizer for DB, to read and write data via Doctrine DBAL |
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*/ |
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class DB extends AbstractAnonymizer |
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{ |
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/** |
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* Doctrine DB Adapter |
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* @var Connection |
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*/ |
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private $conn; |
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/** |
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* Various Options for drivers |
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* @var array |
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*/ |
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private $driverOptions = [ |
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'pdo_mysql' => [1001 => true], // 1001 = \PDO::MYSQL_ATTR_LOCAL_INFILE |
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]; |
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/** |
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* Various generic utils |
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* @var DBUtils |
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*/ |
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private $dbUtils; |
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/** |
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* Primary Key |
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* @var string |
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*/ |
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private $priKey; |
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/** |
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* Define the way we update / insert data |
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* @var string |
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*/ |
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private $mode = 'queries'; |
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/** |
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* Contains queries if returnRes is true |
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* @var array |
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*/ |
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private $queries = []; |
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/** |
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* File resource for the csv (batch mode) |
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* @var resource |
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*/ |
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private $csv; |
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/** |
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* Define available update modes |
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* @var array |
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*/ |
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private $updateMode = [ |
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'queries' => 'doUpdateByQueries', |
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'batch' => 'doBatchUpdate' |
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]; |
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/** |
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* Define available insert modes |
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* @var array |
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*/ |
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private $insertMode = [ |
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'queries' => 'doInsertByQueries', |
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'batch' => 'doBatchInsert' |
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]; |
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/** |
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* Init connection |
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* |
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* @param $params Parameters to send to Doctrine DB |
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*/ |
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public function __construct(array $params) |
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{ |
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// Set specific options |
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$params['driverOptions'] = array_key_exists($params['driver'], $this->driverOptions) |
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? $this->driverOptions[$params['driver']] |
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: []; |
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$this->conn = DbalDriverManager::getConnection($params, new DbalConfiguration()); |
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$this->conn->setFetchMode(\Doctrine\DBAL\FetchMode::ASSOCIATIVE); |
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$this->dbUtils = new DBUtils($this->conn); |
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} |
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/** |
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* Get Doctrine Connection |
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* |
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* @return Connection |
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*/ |
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public function getConn(): Connection |
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{ |
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return $this->conn; |
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} |
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/** |
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* Set the mode for update / insert |
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* @param string $mode |
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* @return DB |
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*/ |
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public function setMode(string $mode): DB |
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{ |
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if (!in_array($mode, ['queries', 'batch'])) { |
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throw new NeuralizerException('Mode could be only queries or batch'); |
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} |
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if ($mode === 'batch') { |
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$driver = $this->conn->getDriver()->getName(); |
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$enclosure = (strpos($driver, 'pgsql') || strpos($driver, 'sqlsrv')) |
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? chr(0) |
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: '"'; |
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$this->csv = new CSVWriter(); |
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$this->csv->setCsvControl('|', $enclosure); |
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} |
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1 |
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$this->mode = $mode; |
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return $this; |
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} |
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/** |
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* Process an entity by reading / writing to the DB |
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* |
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* @param string $entity |
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* @param callable|null $callback |
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* |
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* @return void|array |
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*/ |
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public function processEntity(string $entity, callable $callback = null): array |
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{ |
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$this->dbUtils->assertTableExists($entity); |
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$this->priKey = $this->dbUtils->getPrimaryKey($entity); |
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$this->entityCols = $this->dbUtils->getTableCols($entity); |
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$this->entity = $entity; |
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$actionsOnThatEntity = $this->whatToDoWithEntity(); |
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$this->queries = []; |
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// Wrap everything in a transaction |
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try { |
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$this->conn->beginTransaction(); |
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if ($actionsOnThatEntity & self::TRUNCATE_TABLE) { |
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$where = $this->getWhereConditionInConfig(); |
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$query = $this->runDelete($where); |
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($this->returnRes === true ? array_push($this->queries, $query) : ''); |
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} |
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if ($actionsOnThatEntity & self::UPDATE_TABLE) { |
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$this->updateData($callback); |
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} |
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if ($actionsOnThatEntity & self::INSERT_TABLE) { |
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$this->insertData($callback); |
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} |
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$this->conn->commit(); |
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} catch (\Exception $e) { |
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$this->conn->rollback(); |
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$this->conn->close(); // To avoid locks |
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throw $e; |
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} |
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return $this->queries; |
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} |
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/** |
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* Execute the Delete with Doctrine Query Builder |
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* |
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* @param string $where |
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* |
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* @return string |
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*/ |
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private function runDelete(string $where): string |
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{ |
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$queryBuilder = $this->conn->createQueryBuilder(); |
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$queryBuilder = $queryBuilder->delete($this->entity); |
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if (!empty($where)) { |
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$queryBuilder = $queryBuilder->where($where); |
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} |
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$sql = $queryBuilder->getSQL(); |
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if ($this->pretend === true) { |
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return $sql; |
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} |
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$queryBuilder->execute(); |
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return $sql; |
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} |
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/** |
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* Update data of table |
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* |
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* @param callable $callback |
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*/ |
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private function updateData($callback = null): void |
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{ |
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$queryBuilder = $this->conn->createQueryBuilder(); |
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if ($this->limit === 0) { |
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$this->setLimit($this->dbUtils->countResults($this->entity)); |
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} |
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$startAt = 0; // The first part of the limit (offset) |
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$num = 0; // The number of rows updated |
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while ($num < $this->limit) { |
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$rows = $queryBuilder |
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->select('*')->from($this->entity) |
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->setFirstResult($startAt)->setMaxResults($this->batchSize) |
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->orderBy($this->priKey) |
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->execute(); |
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// I need to read line by line if I have to update the table |
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// to make sure I do update by update (slower but no other choice for now) |
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3 |
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foreach ($rows as $row) { |
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// Call the right method according to the mode |
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$this->{$this->updateMode[$this->mode]}($row); |
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3 |
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if (!is_null($callback)) { |
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$callback(++$num); |
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} |
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// Have to exit now as we have reached the max |
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3 |
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if ($num >= $this->limit) { |
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break 2; |
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} |
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} |
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// Move the offset |
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// Make sure the loop ends if we have nothing to process |
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$num = $startAt += $this->batchSize; |
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} |
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// Run a final method if defined |
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3 |
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if ($this->mode === 'batch') { |
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$this->loadDataInBatch('update'); |
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} |
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3 |
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} |
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/** |
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* Execute the Update with Doctrine QueryBuilder |
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* @SuppressWarnings("unused") - Used dynamically |
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* @param array $row Full row |
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*/ |
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3 |
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private function doUpdateByQueries(array $row): void |
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{ |
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3 |
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$data = $this->generateFakeData(); |
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3 |
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$queryBuilder = $this->conn->createQueryBuilder(); |
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3 |
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$queryBuilder = $queryBuilder->update($this->entity); |
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3 |
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foreach ($data as $field => $value) { |
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3 |
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$value = empty($row[$field]) ? '' : $value; |
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3 |
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$queryBuilder = $queryBuilder->set( |
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3 |
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$field, |
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3 |
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$this->dbUtils->getCondition($field, $this->entityCols[$field]) |
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); |
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3 |
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$queryBuilder = $queryBuilder->setParameter(":$field", $value); |
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} |
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3 |
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$queryBuilder = $queryBuilder->where("{$this->priKey} = :{$this->priKey}"); |
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3 |
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$queryBuilder = $queryBuilder->setParameter(":{$this->priKey}", $row[$this->priKey]); |
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294
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3 |
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$this->returnRes === true ? |
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3 |
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array_push($this->queries, $this->dbUtils->getRawSQL($queryBuilder)) : |
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''; |
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297
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298
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3 |
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if ($this->pretend === false) { |
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$queryBuilder->execute(); |
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} |
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301
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3 |
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} |
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303
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304
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/** |
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305
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* Write the line required for a later LOAD DATA (or \copy) |
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306
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* @SuppressWarnings("unused") - Used dynamically |
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307
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* @param array $row Full row |
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308
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*/ |
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309
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private function doBatchUpdate(array $row): void |
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310
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{ |
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311
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$fakeData = $this->generateFakeData(); |
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312
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$data = []; |
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313
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// Go trough all fields, and take a value by priority |
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314
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foreach (array_keys($this->entityCols) as $field) { |
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// First take the fake data |
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$data[$field] = $row[$field]; |
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if (!empty($row[$field]) && array_key_exists($field, $fakeData)) { |
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$data[$field] = $fakeData[$field]; |
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} |
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320
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} |
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321
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322
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$this->csv->write($data); |
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323
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} |
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324
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325
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326
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/** |
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327
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* Insert data into table |
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328
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* @param callable $callback |
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329
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*/ |
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330
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1 |
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private function insertData($callback = null): void |
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331
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{ |
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332
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1 |
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for ($rowNum = 1; $rowNum <= $this->limit; $rowNum++) { |
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333
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// Call the right method according to the mode |
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334
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1 |
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$this->{$this->insertMode[$this->mode]}($rowNum); |
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335
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336
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1 |
|
if (!is_null($callback)) { |
|
337
|
1 |
|
$callback($rowNum); |
|
338
|
|
|
} |
|
339
|
|
|
} |
|
340
|
|
|
|
|
341
|
|
|
// Run a final method if defined |
|
342
|
1 |
|
if ($this->mode === 'batch') { |
|
343
|
1 |
|
$this->loadDataInBatch('insert'); |
|
344
|
|
|
} |
|
345
|
1 |
|
} |
|
346
|
|
|
|
|
347
|
|
|
|
|
348
|
|
|
/** |
|
349
|
|
|
* Execute an INSERT with Doctrine QueryBuilder |
|
350
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
351
|
|
|
*/ |
|
352
|
|
|
private function doInsertByQueries(): void |
|
353
|
|
|
{ |
|
354
|
|
|
$data = $this->generateFakeData(); |
|
355
|
|
|
|
|
356
|
|
|
$queryBuilder = $this->conn->createQueryBuilder(); |
|
357
|
|
|
$queryBuilder = $queryBuilder->insert($this->entity); |
|
358
|
|
|
foreach ($data as $field => $value) { |
|
359
|
|
|
$queryBuilder = $queryBuilder->setValue($field, ":$field"); |
|
360
|
|
|
$queryBuilder = $queryBuilder->setParameter(":$field", $value); |
|
361
|
|
|
} |
|
362
|
|
|
|
|
363
|
|
|
$this->returnRes === true ? |
|
364
|
|
|
array_push($this->queries, $this->dbUtils->getRawSQL($queryBuilder)) : |
|
365
|
|
|
''; |
|
366
|
|
|
|
|
367
|
|
|
if ($this->pretend === false) { |
|
368
|
|
|
$queryBuilder->execute(); |
|
369
|
|
|
} |
|
370
|
|
|
} |
|
371
|
|
|
|
|
372
|
|
|
|
|
373
|
|
|
/** |
|
374
|
|
|
* Write the line required for a later LOAD DATA (or \copy) |
|
375
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
376
|
|
|
*/ |
|
377
|
1 |
|
private function doBatchInsert(): void |
|
378
|
|
|
{ |
|
379
|
1 |
|
$data = $this->generateFakeData(); |
|
380
|
1 |
|
$this->csv->write($data); |
|
|
|
|
|
|
381
|
1 |
|
} |
|
382
|
|
|
|
|
383
|
|
|
|
|
384
|
|
|
/** |
|
385
|
|
|
* If a file has been created for the batch mode, destroy it |
|
386
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
387
|
|
|
* @param string $mode "update" or "insert" |
|
388
|
|
|
*/ |
|
389
|
1 |
|
private function loadDataInBatch(string $mode): void |
|
390
|
|
|
{ |
|
391
|
1 |
|
$dbType = substr($this->conn->getDriver()->getName(), 4); |
|
392
|
1 |
|
$method = 'loadDataFor' . ucfirst($dbType); |
|
393
|
|
|
|
|
394
|
1 |
|
$fields = array_keys($this->configEntites[$this->entity]['cols']); |
|
395
|
|
|
// Replace by all fields if update as we have to load everything |
|
396
|
1 |
|
if ($mode === 'update') { |
|
397
|
|
|
$fields = array_keys($this->entityCols); |
|
398
|
|
|
} |
|
399
|
|
|
|
|
400
|
1 |
|
$sql = $this->{$method}($fields, $mode); |
|
401
|
|
|
|
|
402
|
1 |
|
$this->returnRes === true ? array_push($this->queries, $sql) : ''; |
|
403
|
|
|
|
|
404
|
|
|
// Destroy the file |
|
405
|
1 |
|
unlink($this->csv->getRealPath()); |
|
|
|
|
|
|
406
|
1 |
|
} |
|
407
|
|
|
|
|
408
|
|
|
|
|
409
|
|
|
/** |
|
410
|
|
|
* Load Data for MySQL (Specific Query) |
|
411
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
412
|
|
|
* @param array $fields |
|
413
|
|
|
* @param string $mode Not in used here |
|
414
|
|
|
* @return string |
|
415
|
|
|
*/ |
|
416
|
1 |
|
private function loadDataForMysql(array $fields, string $mode): string |
|
|
|
|
|
|
417
|
|
|
{ |
|
418
|
1 |
|
$sql ="LOAD DATA LOCAL INFILE '" . $this->csv->getRealPath() . "' |
|
|
|
|
|
|
419
|
1 |
|
REPLACE INTO TABLE {$this->entity} |
|
420
|
|
|
FIELDS TERMINATED BY '|' ENCLOSED BY '\"' |
|
421
|
1 |
|
(`" . implode("`, `", $fields) . "`)"; |
|
422
|
|
|
|
|
423
|
|
|
// Run the query if asked |
|
424
|
1 |
|
if ($this->pretend === false) { |
|
425
|
1 |
|
$this->conn->query($sql); |
|
426
|
|
|
} |
|
427
|
|
|
|
|
428
|
1 |
|
return $sql; |
|
429
|
|
|
} |
|
430
|
|
|
|
|
431
|
|
|
|
|
432
|
|
|
/** |
|
433
|
|
|
* Load Data for Postgres (Specific Query) |
|
434
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
435
|
|
|
* @param array $fields |
|
436
|
|
|
* @param string $mode "update" or "insert" to know if we truncate or not |
|
437
|
|
|
* @return string |
|
438
|
|
|
*/ |
|
439
|
|
|
private function loadDataForPgsql(array $fields, string $mode): string |
|
440
|
|
|
{ |
|
441
|
|
|
$fields = implode(', ', $fields); |
|
442
|
|
|
|
|
443
|
|
|
$filename = $this->csv->getRealPath(); |
|
|
|
|
|
|
444
|
|
|
if ($this->pretend === false) { |
|
445
|
|
|
if ($mode === 'update') { |
|
446
|
|
|
$this->conn->query("TRUNCATE {$this->entity}"); |
|
447
|
|
|
} |
|
448
|
|
|
$pdo = $this->conn->getWrappedConnection(); |
|
449
|
|
|
$pdo->pgsqlCopyFromFile($this->entity, $filename, '|', '\\\\N', $fields); |
|
|
|
|
|
|
450
|
|
|
} |
|
451
|
|
|
|
|
452
|
|
|
$sql = "COPY {$this->entity} ($fields) FROM '{$filename}' "; |
|
453
|
|
|
$sql.= '... Managed by pgsqlCopyFromFile'; |
|
454
|
|
|
|
|
455
|
|
|
return $sql; |
|
456
|
|
|
} |
|
457
|
|
|
|
|
458
|
|
|
|
|
459
|
|
|
/** |
|
460
|
|
|
* Load Data for SQLServer (Specific Query) |
|
461
|
|
|
* @SuppressWarnings("unused") - Used dynamically |
|
462
|
|
|
* @param array $fields |
|
463
|
|
|
* @param string $mode "update" or "insert" to know if we truncate or not |
|
464
|
|
|
* @return string |
|
465
|
|
|
*/ |
|
466
|
|
|
private function loadDataForSqlsrv(array $fields, string $mode): string |
|
467
|
|
|
{ |
|
468
|
|
|
if (substr(gethostbyname($this->conn->getHost()), 0, 3) !== '127') { |
|
469
|
|
|
throw new NeuralizerException('SQL Server must be on the same host than PHP'); |
|
470
|
|
|
} |
|
471
|
|
|
|
|
472
|
|
|
$fields = implode(',', $fields); |
|
|
|
|
|
|
473
|
|
|
$sql ="BULK INSERT {$this->entity} |
|
474
|
|
|
FROM '" . $this->csv->getRealPath() . "' WITH ( |
|
|
|
|
|
|
475
|
|
|
FIELDTERMINATOR = '|', DATAFILETYPE = 'widechar', ROWTERMINATOR = '" . PHP_EOL . "' |
|
476
|
|
|
)"; |
|
477
|
|
|
|
|
478
|
|
|
$filename = $this->csv->getRealPath(); |
|
|
|
|
|
|
479
|
|
|
if ($this->pretend === false) { |
|
480
|
|
|
if ($mode === 'update') { |
|
481
|
|
|
$this->conn->query("TRUNCATE TABLE {$this->entity}"); |
|
482
|
|
|
} |
|
483
|
|
|
|
|
484
|
|
|
$this->conn->query($sql); |
|
485
|
|
|
} |
|
486
|
|
|
|
|
487
|
|
|
return $sql; |
|
488
|
|
|
} |
|
489
|
|
|
} |
|
490
|
|
|
|
Our type inference engine has found an assignment to a property that is incompatible with the declared type of that property.
Either this assignment is in error or the assigned type should be added to the documentation/type hint for that property..