View GitHub Repository average-minimum-distance

Schedule Inspection
Subscribe
Passed
Push — master ( 8b2ed0...4823d2 )
by Daniel
03:53
created

test_pset_io.test_SetReader()   A

↳ Parent: test_pset_io

Complexity

Conditions 4

Size

Total Lines 8
Code Lines 7

Duplication

Lines 0
Ratio 0 %

Importance

Changes 0
Metric Value
eloc 7
dl 0
loc 8
rs 10
c 0
b 0
f 0
cc 4
nop 2
1 
import os
2 
import pytest
3 
import amd
4 

            


            
                                                                                                            
                                                                
            
                                    
            
            

                
                    5
                

                                    
                                                    
                
                
                

            


            
                                                                        
                            
            
                                    
            
            

                
                    6
                

                                    
                                                    
                
                
                
def test_SetReader(root_dir, reference_data):

            


            
                                                                        
                            
            
                                    
            
            

                
                    7
                

                                    
                                                    
                
                
                
    structs = reference_data['CSD_families']

            


            
                                                                        
                            
            
                                    
            
            

                
                    8
                

                                    
                                                    
                
                
                
    

            


            
                                                                        
                            
            
                                    
            
            

                
                    9
                

                                    
                                                    
                
                
                
    for dataset, structs in reference_data.items():

            


            
                                                                        
                            
            
                                    
            
            

                
                    10
                

                                    
                                                    
                
                
                
        path = os.path.join(root_dir, rf'{dataset}.hdf5')

            


            
                                                                        
                            
            
                                    
            
            

                
                    11
                

                                    
                                                    
                
                
                
        for s, s_ in zip(amd.SetReader(path), structs):

            


            
                                                                        
                            
            
                                    
            
            

                
                    12
                

                                    
                                                    
                
                
                
            if not s == s_:

            


            
                                                                        
                            
            
                                    
            
            

                
                    13
                

                                    
                                                    
                
                
                
                pytest.fail(f'On structure {s.name} SetReader disagrees with reference')

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    14
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    15
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    16
                

                                    
                                                    
                
                
                
def test_SetWriter(root_dir, reference_data):

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    17
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    18
                

                                    
                                                    
                
                
                
    for name in reference_data:

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    19
                

                                    
                                                    
                
                
                
        refs = reference_data[name]

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    20
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    21
                

                                    
                                                    
                
                
                
        path = os.path.join(root_dir, rf'{name}_TEMP.hdf5')

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    22
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    23
                

                                    
                                                    
                
                
                
        with amd.SetWriter(path) as writer:

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    24
                

                                    
                                                    
                
                
                
            writer.iwrite(refs)

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    25
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    26
                

                                    
                                                    
                
                
                
        with amd.SetReader(path) as reader_:

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    27
                

                                    
                                                    
                
                
                
            for s, s_ in zip(refs, reader_):

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    28
                

                                    
                                                    
                
                
                
                if not s == s_:

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    29
                

                                    
                                                    
                
                
                
                    pytest.fail(f'Structure {s_.name} written with SetWriter disagrees with reference')

            


            
                                                                                                            
                            
            
                                    
            
            

                
                    30
                

                                    
                                                    
                
                
                

            


            
                                                                                                            
                                                                
            
                                    
            
            

                
                    31
                

                                    
                                                    
                
                
                
        os.remove(path)

            


            
                                                        
            
                                    
            
            

                
                    32