mandos.model.apis.g2p_data.TrueFalseUnknown.parse() - Code Metrics - Inspection of "feat: massive changes" - dmyersturnbull/mandos - Measure and Improve Code Quality continuously with Scrutinizer

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by Douglas

created 2021-06-30 04:47 UTC

TrueFalseUnknown.parse() A

↳ Parent: mandos.model.apis.g2p_data

Complexity

Conditions

Size

Total Lines	9
Code Lines	8

Duplication

Lines	0
Ratio	0 %

Importance

Changes

Metric	Value
cc	1
eloc	8
nop	2
dl	0
loc	9
rs	10
c	0
b	0
f	0

from dataclasses import dataclass

from typing import List, Optional
import enum


class TrueFalseUnknown(enum.Enum):

    true = enum.auto()
    false = enum.auto()
    unknown = enum.auto()

    @classmethod
    def parse(cls, s: str):

        tf_map = {
            "t": TrueFalseUnknown.true,
            "f": TrueFalseUnknown.false,
            "true": TrueFalseUnknown.true,
            "false": TrueFalseUnknown.false,
        }
        return tf_map.get(s.lower().strip(), TrueFalseUnknown.unknown)


@dataclass

class G2pInteraction:
    target: str
    target_id: str
    target_gene_symbol: str
    target_uniprot: str
    target_species: str
    ligand_id: int
    type: str
    action: str
    selectivity: TrueFalseUnknown
    endogenous: TrueFalseUnknown
    primary_target: TrueFalseUnknown
    affinity_units: str
    affinity_median: float


@dataclass

class G2pData:
    inchikey: str
    g2pid: int
    name: str
    type: str
    approved: bool
    pubchem_id: Optional[int]
    interactions: List[G2pInteraction]


__all__ = ["G2pInteraction", "G2pData", "TrueFalseUnknown"]


1			from dataclasses import dataclass
			0 ignored issues – show introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Missing module docstring Loading history...
2			from typing import List, Optional
3			import enum
4
5
6			class TrueFalseUnknown(enum.Enum):
			0 ignored issues – show introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Missing class docstring Loading history...
7			true = enum.auto()
8			false = enum.auto()
9			unknown = enum.auto()
10
11			@classmethod
12			def parse(cls, s: str):
			0 ignored issues – show introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Missing function or method docstring Loading history... Coding Style Naming introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Argument name "s" doesn't conform to snake_case naming style ('([^\\W\\dA-Z][^\\WA-Z]2,\|_[^\\WA-Z]*\|__[^\\WA-Z\\d_][^\\WA-Z]+__)$' pattern) This check looks for invalid names for a range of different identifiers. You can set regular expressions to which the identifiers must conform if the defaults do not match your requirements. If your project includes a Pylint configuration file, the settings contained in that file take precedence. To find out more about Pylint, please refer to their site. Loading history...
13			tf_map = {
14			"t": TrueFalseUnknown.true,
15			"f": TrueFalseUnknown.false,
16			"true": TrueFalseUnknown.true,
17			"false": TrueFalseUnknown.false,
18			}
19			return tf_map.get(s.lower().strip(), TrueFalseUnknown.unknown)
20
21
22			@dataclass
			0 ignored issues – show introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Missing class docstring Loading history... best-practice introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Too many instance attributes (13/7) Loading history...
23			class G2pInteraction:
24			target: str
25			target_id: str
26			target_gene_symbol: str
27			target_uniprot: str
28			target_species: str
29			ligand_id: int
30			type: str
31			action: str
32			selectivity: TrueFalseUnknown
33			endogenous: TrueFalseUnknown
34			primary_target: TrueFalseUnknown
35			affinity_units: str
36			affinity_median: float
37
38
39			@dataclass
			0 ignored issues – show introduced 2021-06-30 04:51 UTC by Report Bug Copy Issue Report Missing class docstring Loading history...
40			class G2pData:
41			inchikey: str
42			g2pid: int
43			name: str
44			type: str
45			approved: bool
46			pubchem_id: Optional[int]
47			interactions: List[G2pInteraction]
48
49
50			__all__ = ["G2pInteraction", "G2pData", "TrueFalseUnknown"]
51

dmyersturnbull / mandos

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TrueFalseUnknown.parse() A

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