mandos.search.pubchem.drugbank_ddi_search.DrugbankDdiSearch.find() - Code Metrics - Inspection of "feat: more searches and doc" - dmyersturnbull/mandos - Measure and Improve Code Quality continuously with Scrutinizer

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by Douglas

created 2021-03-24 04:50 UTC

DrugbankDdiSearch.find() A

↳ Parent: mandos.search.pubchem.drugbank_ddi_search

Complexity

Conditions

Size

Total Lines	18
Code Lines	17

Duplication

Lines	0
Ratio	0 %

Importance

Changes

Metric	Value
cc	1
eloc	17
nop	2
dl	0
loc	18
rs	9.55
c	0
b	0
f	0

from dataclasses import dataclass

from typing import Sequence

from mandos.search.pubchem import PubchemHit, PubchemSearch


@dataclass(frozen=True, order=True, repr=True)

class DrugbankDdiHit(PubchemHit):
    """"""

    description: str


class DrugbankDdiSearch(PubchemSearch[DrugbankDdiHit]):

    """"""

    @property
    def data_source(self) -> str:

        return "DrugBank"

    def find(self, inchikey: str) -> Sequence[DrugbankDdiHit]:

        data = self.api.fetch_data(inchikey)
        return [
            DrugbankDdiHit(
                record_id=None,
                origin_inchikey=inchikey,
                matched_inchikey=data.names_and_identifiers.inchikey,
                compound_id=str(data.cid),
                compound_name=data.name,
                predicate="ddi",
                object_id=dd.drug_drugbank_id,
                object_name=dd.drug_drugbank_id,
                search_key=self.key,
                search_class=self.search_class,
                data_source=self.data_source,
                description=dd.description,
            )
            for dd in data.biomolecular_interactions_and_pathways.drugbank_ddis
        ]


__all__ = ["DrugbankDdiHit", "DrugbankDdiSearch"]


1			from dataclasses import dataclass
			0 ignored issues – show introduced 2021-03-24 04:52 UTC by Report Bug Copy Issue Report Missing module docstring Loading history...
2			from typing import Sequence
3
4			from mandos.search.pubchem import PubchemHit, PubchemSearch
5
6
7			@dataclass(frozen=True, order=True, repr=True)
			0 ignored issues – show Documentation introduced 2021-03-24 04:52 UTC by Report Bug Copy Issue Report Empty class docstring Loading history...
8			class DrugbankDdiHit(PubchemHit):
9			""""""
10
11			description: str
12
13
14			class DrugbankDdiSearch(PubchemSearch[DrugbankDdiHit]):
			0 ignored issues – show Documentation introduced 2021-03-24 04:52 UTC by Report Bug Copy Issue Report Empty class docstring Loading history...
15			""""""
16
17			@property
18			def data_source(self) -> str:
			0 ignored issues – show introduced 2021-03-24 04:52 UTC by Report Bug Copy Issue Report Missing function or method docstring Loading history...
19			return "DrugBank"
20
21			def find(self, inchikey: str) -> Sequence[DrugbankDdiHit]:
			0 ignored issues – show introduced 2021-03-24 04:52 UTC by Report Bug Copy Issue Report Missing function or method docstring Loading history...
22			data = self.api.fetch_data(inchikey)
23			return [
24			DrugbankDdiHit(
25			record_id=None,
26			origin_inchikey=inchikey,
27			matched_inchikey=data.names_and_identifiers.inchikey,
28			compound_id=str(data.cid),
29			compound_name=data.name,
30			predicate="ddi",
31			object_id=dd.drug_drugbank_id,
32			object_name=dd.drug_drugbank_id,
33			search_key=self.key,
34			search_class=self.search_class,
35			data_source=self.data_source,
36			description=dd.description,
37			)
38			for dd in data.biomolecular_interactions_and_pathways.drugbank_ddis
39			]
40
41
42			__all__ = ["DrugbankDdiHit", "DrugbankDdiSearch"]
43

dmyersturnbull / mandos

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DrugbankDdiSearch.find() A

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