excel.helpers.fill_uid.get_relationship() - Code Metrics - Inspection of ":twisted_rightwards_arrows: Merge branch 'issue-50..." - cnr-ibba/IMAGE-InjectTool - Measure and Improve Code Quality continuously with Scrutinizer

Completed

Push — devel ( 165cbd...6b7d07 )

by Paolo

created 2019-11-14 17:04 UTC

excel.helpers.fill_uid.get_relationship() A

↳ Parent: excel.helpers.fill_uid

Complexity

Conditions

Size

Total Lines	16
Code Lines	14

Duplication

Lines	0
Ratio	0 %

Importance

Changes

Metric	Value
eloc	14
dl	0
loc	16
rs	9.7
c	0
b	0
f	0
cc	2
nop	4

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Fri Jul  5 16:37:48 2019

@author: Paolo Cozzi <[email protected]>
"""

import logging

from common.constants import (
    ERROR, LOADED, ACCURACIES, SAMPLE_STORAGE, SAMPLE_STORAGE_PROCESSING)
from common.helpers import image_timedelta, parse_image_timedelta
from uid.helpers import get_or_create_obj, update_or_create_obj
from uid.models import (
    DictBreed, DictCountry, DictSpecie, DictSex, DictUberon, Animal,
    Sample, DictDevelStage, DictPhysioStage)
from submissions.helpers import send_message
from validation.helpers import construct_validation_message
from validation.models import ValidationSummary

from .exceptions import ExcelImportError
from .exceltemplate import ExcelTemplateReader

# Get an instance of a logger
logger = logging.getLogger(__name__)


def fill_uid_breeds(submission_obj, template):
    """Fill DictBreed from a excel record"""

    logger.info("fill_uid_breeds() started")

    # ok get languages from submission (useful for translation)
    language = submission_obj.gene_bank_country.label

    # iterate among excel template
    for record in template.get_breed_records():
        # get a DictSpecie object. Species are in latin names, but I can
        # find also a common name in translation tables
        specie = DictSpecie.get_specie_check_synonyms(
            species_label=record.species,
            language=language)

        # get country for breeds. Ideally will be the same of submission,
        # however, it could be possible to store data from other contries
        country = DictCountry.objects.get(label=record.efabis_breed_country)

        get_or_create_obj(
            DictBreed,
            supplied_breed=record.supplied_breed,
            specie=specie,
            country=country)

    logger.info("fill_uid_breeds() completed")


def get_relationship(animal_id_in_data_source, name, breed, owner):
    try:
        parent = Animal.objects.get(
            name=name,
            breed=breed,
            owner=owner)

    except Animal.DoesNotExist as exc:
        logger.error(exc)
        message = (
            "Unknown parent '%s': check animal '%s' "
            "in your dataset" % (name, animal_id_in_data_source))
        logger.error(message)
        raise ExcelImportError(message)

    return parent


def fill_uid_animals(submission_obj, template):
    # debug
    logger.info("called fill_uid_animals()")

    # get language
    language = submission_obj.gene_bank_country.label

    # iterate among excel template
    for record in template.get_animal_records():
        # determine sex. Check for values
        sex = DictSex.objects.get(label__iexact=record.sex)

        # get specie (mind synonyms)
        specie = DictSpecie.get_specie_check_synonyms(
            species_label=record.species, language=language)

        logger.debug("Found '%s' as specie" % (specie))

        # how I can get breed from my data?
        breed_record = template.get_breed_from_animal(record)

        # get a country for this breed
        country = DictCountry.objects.get(
            label=breed_record.efabis_breed_country)

        # ok get a real dictbreed object
        breed = DictBreed.objects.get(
            supplied_breed=breed_record.supplied_breed,
            specie=specie,
            country=country)

        logger.debug("Selected breed is %s" % (breed))

        # define mother and father
        mother, father = None, None

        # get name for this animal and for mother and father
        if record.father_id_in_data_source:
            logger.debug("Getting %s as father" % (
                record.father_id_in_data_source))

            father = get_relationship(
                record.animal_id_in_data_source,
                record.father_id_in_data_source,
                breed,
                submission_obj.owner)

        if record.mother_id_in_data_source:
            logger.debug("Getting %s as mother" % (
                record.mother_id_in_data_source))

            mother = get_relationship(
                record.animal_id_in_data_source,
                record.mother_id_in_data_source,
                breed,
                submission_obj.owner)

        # now get accuracy
        accuracy = ACCURACIES.get_value_by_desc(
            record.birth_location_accuracy)

        # create a new object. Using defaults to avoid collisions when
        # updating data
        defaults = {
            'alternative_id': record.alternative_animal_id,
            'description': record.animal_description,
            'sex': sex,
            'father': father,
            'mother': mother,
            'birth_date': record.birth_date,
            'birth_location': record.birth_location,
            'birth_location_latitude': record.birth_location_latitude,
            'birth_location_longitude': record.birth_location_longitude,
            'birth_location_accuracy': accuracy,
        }

        # creating or updating an object
        update_or_create_obj(
            Animal,
            name=record.animal_id_in_data_source,
            breed=breed,
            owner=submission_obj.owner,
            submission=submission_obj,
            defaults=defaults)

    # create a validation summary object and set all_count
    validation_summary = get_or_create_obj(
        ValidationSummary,
        submission=submission_obj,
        type="animal")

    # reset counts
    validation_summary.reset_all_count()

    # debug
    logger.info("fill_uid_animals() completed")


def parse_times(record, animal):
    """Try to deal with times in excel templates"""

    animal_age_at_collection, time_units = None, None

    # animal age could be present or not
    try:
        if record.animal_age_at_collection:
            animal_age_at_collection, time_units = parse_image_timedelta(
                record.animal_age_at_collection)

        else:
            # derive animal age at collection
            animal_age_at_collection, time_units = image_timedelta(
                record.collection_date, animal.birth_date)

    except ValueError as exc:
        message = (
            "Error for Sample '%s' at animal_age_at_collection column: %s" % (
                    record.sample_id_in_data_source, exc))
        logger.error(message)
        raise ExcelImportError(message)

    # another time column
    preparation_interval, preparation_interval_units = None, None

    try:
        if record.sampling_to_preparation_interval:
            preparation_interval, preparation_interval_units = \
                parse_image_timedelta(record.sampling_to_preparation_interval)

    except ValueError as exc:
        message = (
            "Error for Sample '%s' at sampling_to_preparation_interval "
            "column: %s" % (
                record.sample_id_in_data_source, exc))
        logger.error(message)
        raise ExcelImportError(message)

    return (animal_age_at_collection, time_units, preparation_interval,
            preparation_interval_units)


def fill_uid_samples(submission_obj, template):
    # debug
    logger.info("called fill_uid_samples()")

    # get language
    language = submission_obj.gene_bank_country.label

    # iterate among excel template
    for record in template.get_sample_records():
        # get animal by reading record
        animal_record = template.get_animal_from_sample(record)

        # get specie (mind synonyms)
        specie = DictSpecie.get_specie_check_synonyms(
            species_label=animal_record.species,
            language=language)

        logger.debug("Found '%s' as specie" % (specie))

        # get breed from animal record
        breed_record = template.get_breed_from_animal(animal_record)

        # get a country for this breed
        country = DictCountry.objects.get(
            label=breed_record.efabis_breed_country)

        # ok get a real dictbreed object
        breed = DictBreed.objects.get(
            supplied_breed=breed_record.supplied_breed,
            specie=specie,
            country=country)

        logger.debug("Selected breed is %s" % (breed))

        animal = Animal.objects.get(
            name=animal_record.animal_id_in_data_source,
            breed=breed,
            owner=submission_obj.owner)

        logger.debug("Selected animal is %s" % (animal))

        # get a organism part. Organism parts need to be in lowercases
        organism_part = get_or_create_obj(
            DictUberon,
            label=record.organism_part
        )

        # get developmental_stage and physiological_stage terms
        # they are not mandatory
        devel_stage, physio_stage = None, None

        if record.developmental_stage:
            devel_stage = get_or_create_obj(
                DictDevelStage,
                label=record.developmental_stage
            )

        if record.physiological_stage:
            physio_stage = get_or_create_obj(
                DictPhysioStage,
                label=record.physiological_stage
            )

        # deal with time columns
        (animal_age_at_collection, time_units, preparation_interval,
         preparation_interval_units) = parse_times(record, animal)

        # now get accuracy
        accuracy = ACCURACIES.get_value_by_desc(
            record.collection_place_accuracy)

        # now get storage and storage processing
        # TODO; check those values in excel columns
        storage = SAMPLE_STORAGE.get_value_by_desc(
            record.sample_storage)

        storage_processing = SAMPLE_STORAGE_PROCESSING.get_value_by_desc(
            record.sample_storage_processing)

        # create a new object. Using defaults to avoid collisions when
        # updating data
        defaults = {
            'alternative_id': record.alternative_sample_id,
            'description': record.sample_description,
            'protocol': record.specimen_collection_protocol,
            'collection_date': record.collection_date,
            'collection_place_latitude': record.collection_place_latitude,
            'collection_place_longitude': record.collection_place_longitude,
            'collection_place': record.collection_place,
            'collection_place_accuracy': accuracy,
            'organism_part': organism_part,
            'developmental_stage': devel_stage,
            'physiological_stage': physio_stage,
            'animal_age_at_collection': animal_age_at_collection,
            'animal_age_at_collection_units': time_units,
            'availability': record.availability,
            'storage': storage,
            'storage_processing': storage_processing,
            'preparation_interval': preparation_interval,
            'preparation_interval_units': preparation_interval_units,
        }

        update_or_create_obj(
            Sample,
            name=record.sample_id_in_data_source,
            animal=animal,
            owner=submission_obj.owner,
            submission=submission_obj,
            defaults=defaults)

    # create a validation summary object and set all_count
    validation_summary = get_or_create_obj(
        ValidationSummary,
        submission=submission_obj,
        type="sample")

    # reset counts
    validation_summary.reset_all_count()

    # debug
    logger.info("fill_uid_samples() completed")


def check_UID(submission_obj, reader):
    # check for species and sex in a similar way as cryoweb does
    # TODO: identical to CRBanim. Move to a mixin
    check, not_found = reader.check_sex()

    # check sex
    if not check:
        message = (
            "Not all Sex terms are loaded into database: "
            "check for '%s' in your dataset" % (not_found))

        raise ExcelImportError(message)

    check, not_found = reader.check_species(
        submission_obj.gene_bank_country)

    # check species and related
    if not check:
        raise ExcelImportError(
            "Some species are not loaded into database: "
            "check for '%s' in your dataset" % (not_found))

    check, not_found = reader.check_species_in_animal_sheet()

    if not check:
        raise ExcelImportError(
            "Some species are not defined in breed sheet: "
            "check for '%s' in your dataset" % (not_found))

    # check countries
    check, not_found = reader.check_countries()

    if not check:
        raise ExcelImportError(
            "Those countries are not loaded in database: "
            "check for '%s' in your dataset" % (not_found))

    # check accuracies
    check, not_found = reader.check_accuracies()

    if not check:
        message = (
            "Not all accuracy levels are defined in database: "
            "check for '%s' in your dataset" % (not_found))

        raise ExcelImportError(message)


def upload_template(submission_obj):
    # debug
    logger.info("Importing from Excel template file")

    # this is the full path in docker container
    fullpath = submission_obj.get_uploaded_file_path()

    # read submission data
    reader = ExcelTemplateReader()
    reader.read_file(fullpath)

    # start data loading
    try:
        # check UID data like cryoweb does
        check_UID(submission_obj, reader)

        # BREEDS
        fill_uid_breeds(submission_obj, reader)

        # ANIMALS
        fill_uid_animals(submission_obj, reader)

        # SAMPLES
        fill_uid_samples(submission_obj, reader)

    except Exception as exc:
        # set message:
        message = "Error in importing data: %s" % (str(exc))

        # save a message in database
        submission_obj.status = ERROR
        submission_obj.message = message
        submission_obj.save()

        # send async message
        send_message(submission_obj)

        # debug
        logger.error("Error in importing from Template: %s" % (exc))
        logger.exception(exc)

        return False

    else:
        message = "Template import completed for submission: %s" % (
            submission_obj.id)

        submission_obj.message = message
        submission_obj.status = LOADED
        submission_obj.save()

        # send async message
        send_message(
            submission_obj,
            validation_message=construct_validation_message(submission_obj))

    logger.info("Import from Template is complete")

    return True


1			#!/usr/bin/env python3
2			# -- coding: utf-8 --
3			"""
4			Created on Fri Jul 5 16:37:48 2019
5
6			@author: Paolo Cozzi <[email protected]>
7			"""
8
9			import logging
10
11			from common.constants import (
12			ERROR, LOADED, ACCURACIES, SAMPLE_STORAGE, SAMPLE_STORAGE_PROCESSING)
13			from common.helpers import image_timedelta, parse_image_timedelta
14			from uid.helpers import get_or_create_obj, update_or_create_obj
15			from uid.models import (
16			DictBreed, DictCountry, DictSpecie, DictSex, DictUberon, Animal,
17			Sample, DictDevelStage, DictPhysioStage)
18			from submissions.helpers import send_message
19			from validation.helpers import construct_validation_message
20			from validation.models import ValidationSummary
21
22			from .exceptions import ExcelImportError
23			from .exceltemplate import ExcelTemplateReader
24
25			# Get an instance of a logger
26			logger = logging.getLogger(__name__)
27
28
29			def fill_uid_breeds(submission_obj, template):
30			"""Fill DictBreed from a excel record"""
31
32			logger.info("fill_uid_breeds() started")
33
34			# ok get languages from submission (useful for translation)
35			language = submission_obj.gene_bank_country.label
36
37			# iterate among excel template
38			for record in template.get_breed_records():
39			# get a DictSpecie object. Species are in latin names, but I can
40			# find also a common name in translation tables
41			specie = DictSpecie.get_specie_check_synonyms(
42			species_label=record.species,
43			language=language)
44
45			# get country for breeds. Ideally will be the same of submission,
46			# however, it could be possible to store data from other contries
47			country = DictCountry.objects.get(label=record.efabis_breed_country)
48
49			get_or_create_obj(
50			DictBreed,
51			supplied_breed=record.supplied_breed,
52			specie=specie,
53			country=country)
54
55			logger.info("fill_uid_breeds() completed")
56
57
58			def get_relationship(animal_id_in_data_source, name, breed, owner):
59			try:
60			parent = Animal.objects.get(
61			name=name,
62			breed=breed,
63			owner=owner)
64
65			except Animal.DoesNotExist as exc:
66			logger.error(exc)
67			message = (
68			"Unknown parent '%s': check animal '%s' "
69			"in your dataset" % (name, animal_id_in_data_source))
70			logger.error(message)
71			raise ExcelImportError(message)
72
73			return parent
74
75
76			def fill_uid_animals(submission_obj, template):
77			# debug
78			logger.info("called fill_uid_animals()")
79
80			# get language
81			language = submission_obj.gene_bank_country.label
82
83			# iterate among excel template
84			for record in template.get_animal_records():
85			# determine sex. Check for values
86			sex = DictSex.objects.get(label__iexact=record.sex)
87
88			# get specie (mind synonyms)
89			specie = DictSpecie.get_specie_check_synonyms(
90			species_label=record.species, language=language)
91
92			logger.debug("Found '%s' as specie" % (specie))
93
94			# how I can get breed from my data?
95			breed_record = template.get_breed_from_animal(record)
96
97			# get a country for this breed
98			country = DictCountry.objects.get(
99			label=breed_record.efabis_breed_country)
100
101			# ok get a real dictbreed object
102			breed = DictBreed.objects.get(
103			supplied_breed=breed_record.supplied_breed,
104			specie=specie,
105			country=country)
106
107			logger.debug("Selected breed is %s" % (breed))
108
109			# define mother and father
110			mother, father = None, None
111
112			# get name for this animal and for mother and father
113			if record.father_id_in_data_source:
114			logger.debug("Getting %s as father" % (
115			record.father_id_in_data_source))
116
117			father = get_relationship(
118			record.animal_id_in_data_source,
119			record.father_id_in_data_source,
120			breed,
121			submission_obj.owner)
122
123			if record.mother_id_in_data_source:
124			logger.debug("Getting %s as mother" % (
125			record.mother_id_in_data_source))
126
127			mother = get_relationship(
128			record.animal_id_in_data_source,
129			record.mother_id_in_data_source,
130			breed,
131			submission_obj.owner)
132
133			# now get accuracy
134			accuracy = ACCURACIES.get_value_by_desc(
135			record.birth_location_accuracy)
136
137			# create a new object. Using defaults to avoid collisions when
138			# updating data
139			defaults = {
140			'alternative_id': record.alternative_animal_id,
141			'description': record.animal_description,
142			'sex': sex,
143			'father': father,
144			'mother': mother,
145			'birth_date': record.birth_date,
146			'birth_location': record.birth_location,
147			'birth_location_latitude': record.birth_location_latitude,
148			'birth_location_longitude': record.birth_location_longitude,
149			'birth_location_accuracy': accuracy,
150			}
151
152			# creating or updating an object
153			update_or_create_obj(
154			Animal,
155			name=record.animal_id_in_data_source,
156			breed=breed,
157			owner=submission_obj.owner,
158			submission=submission_obj,
159			defaults=defaults)
160
161			# create a validation summary object and set all_count
162			validation_summary = get_or_create_obj(
163			ValidationSummary,
164			submission=submission_obj,
165			type="animal")
166
167			# reset counts
168			validation_summary.reset_all_count()
169
170			# debug
171			logger.info("fill_uid_animals() completed")
172
173
174			def parse_times(record, animal):
175			"""Try to deal with times in excel templates"""
176
177			animal_age_at_collection, time_units = None, None
178
179			# animal age could be present or not
180			try:
181			if record.animal_age_at_collection:
182			animal_age_at_collection, time_units = parse_image_timedelta(
183			record.animal_age_at_collection)
184
185			else:
186			# derive animal age at collection
187			animal_age_at_collection, time_units = image_timedelta(
188			record.collection_date, animal.birth_date)
189
190			except ValueError as exc:
191			message = (
192			"Error for Sample '%s' at animal_age_at_collection column: %s" % (
193			record.sample_id_in_data_source, exc))
194			logger.error(message)
195			raise ExcelImportError(message)
196
197			# another time column
198			preparation_interval, preparation_interval_units = None, None
199
200			try:
201			if record.sampling_to_preparation_interval:
202			preparation_interval, preparation_interval_units = \
203			parse_image_timedelta(record.sampling_to_preparation_interval)
204
205			except ValueError as exc:
206			message = (
207			"Error for Sample '%s' at sampling_to_preparation_interval "
208			"column: %s" % (
209			record.sample_id_in_data_source, exc))
210			logger.error(message)
211			raise ExcelImportError(message)
212
213			return (animal_age_at_collection, time_units, preparation_interval,
214			preparation_interval_units)
215
216
217			def fill_uid_samples(submission_obj, template):
218			# debug
219			logger.info("called fill_uid_samples()")
220
221			# get language
222			language = submission_obj.gene_bank_country.label
223
224			# iterate among excel template
225			for record in template.get_sample_records():
226			# get animal by reading record
227			animal_record = template.get_animal_from_sample(record)
228
229			# get specie (mind synonyms)
230			specie = DictSpecie.get_specie_check_synonyms(
231			species_label=animal_record.species,
232			language=language)
233
234			logger.debug("Found '%s' as specie" % (specie))
235
236			# get breed from animal record
237			breed_record = template.get_breed_from_animal(animal_record)
238
239			# get a country for this breed
240			country = DictCountry.objects.get(
241			label=breed_record.efabis_breed_country)
242
243			# ok get a real dictbreed object
244			breed = DictBreed.objects.get(
245			supplied_breed=breed_record.supplied_breed,
246			specie=specie,
247			country=country)
248
249			logger.debug("Selected breed is %s" % (breed))
250
251			animal = Animal.objects.get(
252			name=animal_record.animal_id_in_data_source,
253			breed=breed,
254			owner=submission_obj.owner)
255
256			logger.debug("Selected animal is %s" % (animal))
257
258			# get a organism part. Organism parts need to be in lowercases
259			organism_part = get_or_create_obj(
260			DictUberon,
261			label=record.organism_part
262			)
263
264			# get developmental_stage and physiological_stage terms
265			# they are not mandatory
266			devel_stage, physio_stage = None, None
267
268			if record.developmental_stage:
269			devel_stage = get_or_create_obj(
270			DictDevelStage,
271			label=record.developmental_stage
272			)
273
274			if record.physiological_stage:
275			physio_stage = get_or_create_obj(
276			DictPhysioStage,
277			label=record.physiological_stage
278			)
279
280			# deal with time columns
281			(animal_age_at_collection, time_units, preparation_interval,
282			preparation_interval_units) = parse_times(record, animal)
283
284			# now get accuracy
285			accuracy = ACCURACIES.get_value_by_desc(
286			record.collection_place_accuracy)
287
288			# now get storage and storage processing
289			# TODO; check those values in excel columns
290			storage = SAMPLE_STORAGE.get_value_by_desc(
291			record.sample_storage)
292
293			storage_processing = SAMPLE_STORAGE_PROCESSING.get_value_by_desc(
294			record.sample_storage_processing)
295
296			# create a new object. Using defaults to avoid collisions when
297			# updating data
298			defaults = {
299			'alternative_id': record.alternative_sample_id,
300			'description': record.sample_description,
301			'protocol': record.specimen_collection_protocol,
302			'collection_date': record.collection_date,
303			'collection_place_latitude': record.collection_place_latitude,
304			'collection_place_longitude': record.collection_place_longitude,
305			'collection_place': record.collection_place,
306			'collection_place_accuracy': accuracy,
307			'organism_part': organism_part,
308			'developmental_stage': devel_stage,
309			'physiological_stage': physio_stage,
310			'animal_age_at_collection': animal_age_at_collection,
311			'animal_age_at_collection_units': time_units,
312			'availability': record.availability,
313			'storage': storage,
314			'storage_processing': storage_processing,
315			'preparation_interval': preparation_interval,
316			'preparation_interval_units': preparation_interval_units,
317			}
318
319			update_or_create_obj(
320			Sample,
321			name=record.sample_id_in_data_source,
322			animal=animal,
323			owner=submission_obj.owner,
324			submission=submission_obj,
325			defaults=defaults)
326
327			# create a validation summary object and set all_count
328			validation_summary = get_or_create_obj(
329			ValidationSummary,
330			submission=submission_obj,
331			type="sample")
332
333			# reset counts
334			validation_summary.reset_all_count()
335
336			# debug
337			logger.info("fill_uid_samples() completed")
338
339
340			def check_UID(submission_obj, reader):
341			# check for species and sex in a similar way as cryoweb does
342			# TODO: identical to CRBanim. Move to a mixin
343			check, not_found = reader.check_sex()
344
345			# check sex
346			if not check:
347			message = (
348			"Not all Sex terms are loaded into database: "
349			"check for '%s' in your dataset" % (not_found))
350
351			raise ExcelImportError(message)
352
353			check, not_found = reader.check_species(
354			submission_obj.gene_bank_country)
355
356			# check species and related
357			if not check:
358			raise ExcelImportError(
359			"Some species are not loaded into database: "
360			"check for '%s' in your dataset" % (not_found))
361
362			check, not_found = reader.check_species_in_animal_sheet()
363
364			if not check:
365			raise ExcelImportError(
366			"Some species are not defined in breed sheet: "
367			"check for '%s' in your dataset" % (not_found))
368
369			# check countries
370			check, not_found = reader.check_countries()
371
372			if not check:
373			raise ExcelImportError(
374			"Those countries are not loaded in database: "
375			"check for '%s' in your dataset" % (not_found))
376
377			# check accuracies
378			check, not_found = reader.check_accuracies()
379
380			if not check:
381			message = (
382			"Not all accuracy levels are defined in database: "
383			"check for '%s' in your dataset" % (not_found))
384
385			raise ExcelImportError(message)
386
387
388			def upload_template(submission_obj):
389			# debug
390			logger.info("Importing from Excel template file")
391
392			# this is the full path in docker container
393			fullpath = submission_obj.get_uploaded_file_path()
394
395			# read submission data
396			reader = ExcelTemplateReader()
397			reader.read_file(fullpath)
398
399			# start data loading
400			try:
401			# check UID data like cryoweb does
402			check_UID(submission_obj, reader)
403
404			# BREEDS
405			fill_uid_breeds(submission_obj, reader)
406
407			# ANIMALS
408			fill_uid_animals(submission_obj, reader)
409
410			# SAMPLES
411			fill_uid_samples(submission_obj, reader)
412
413			except Exception as exc:
414			# set message:
415			message = "Error in importing data: %s" % (str(exc))
416
417			# save a message in database
418			submission_obj.status = ERROR
419			submission_obj.message = message
420			submission_obj.save()
421
422			# send async message
423			send_message(submission_obj)
424
425			# debug
426			logger.error("Error in importing from Template: %s" % (exc))
427			logger.exception(exc)
428
429			return False
430
431			else:
432			message = "Template import completed for submission: %s" % (
433			submission_obj.id)
434
435			submission_obj.message = message
436			submission_obj.status = LOADED
437			submission_obj.save()
438
439			# send async message
440			send_message(
441			submission_obj,
442			validation_message=construct_validation_message(submission_obj))
443
444			logger.info("Import from Template is complete")
445
446			return True
447

cnr-ibba / IMAGE-InjectTool

Push — devel ( 165cbd...6b7d07 )

excel.helpers.fill_uid.get_relationship() A

Complexity

Size

Duplication

Importance

Duplication Side-by-Side

Filter issues like