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#!/usr/bin/env python3 |
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# -*- coding: utf-8 -*- |
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""" |
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Created on Wed Feb 14 10:34:44 2018 |
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@author: Paolo Cozzi <[email protected]> |
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""" |
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from django.test import TestCase |
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from uid.models import Animal, Sample, DictSex |
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from ..helpers import ( |
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get_model_object, parse_image_alias, get_or_create_obj, |
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update_or_create_obj) |
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class GetModelObjectTestCase(TestCase): |
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fixtures = [ |
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'uid/animal', |
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'uid/dictbreed', |
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'uid/dictcountry', |
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'uid/dictrole', |
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'uid/dictsex', |
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'uid/dictspecie', |
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'uid/dictstage', |
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'uid/dictuberon', |
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'uid/organization', |
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'uid/publication', |
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'uid/sample', |
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'uid/submission', |
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'uid/user', |
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] |
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def setUp(self): |
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self.animal_id = 1 |
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self.sample_id = 1 |
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def test_get_model_object(self): |
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test = get_model_object("Animal", 1) |
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self.assertEqual(test.id, self.animal_id) |
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self.assertIsInstance(test, Animal) |
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test = get_model_object("Sample", 1) |
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self.assertEqual(test.id, self.sample_id) |
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self.assertIsInstance(test, Sample) |
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# assert errors |
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self.assertRaisesMessage( |
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Exception, |
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"Unknown table", |
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get_model_object, |
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"Name", |
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1) |
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class ParseImageAliasTestCase(TestCase): |
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fixtures = [ |
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'uid/animal', |
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'uid/dictbreed', |
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'uid/dictcountry', |
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'uid/dictrole', |
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'uid/dictsex', |
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'uid/dictspecie', |
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'uid/dictstage', |
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'uid/dictuberon', |
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'uid/organization', |
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'uid/publication', |
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'uid/sample', |
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'uid/submission', |
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'uid/user', |
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] |
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def setUp(self): |
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self.animal = Animal.objects.get(pk=1) |
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self.sample = Sample.objects.get(pk=1) |
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def test_parse_aliases(self): |
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animal_alias = self.animal.biosample_alias |
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sample_alias = self.sample.biosample_alias |
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# test animal |
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table, pk = parse_image_alias(animal_alias) |
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self.assertEqual(table, "Animal") |
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self.assertEqual(pk, self.animal.id) |
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# test sample |
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table, pk = parse_image_alias(sample_alias) |
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self.assertEqual(table, "Sample") |
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self.assertEqual(pk, self.sample.id) |
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def test_wrong_alias(self): |
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"""Test a wrong alias format""" |
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self.assertRaisesMessage( |
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Exception, |
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"Cannot deal with 'FAKEA0000123456'", |
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parse_image_alias, |
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"FAKEA0000123456") |
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class CreateOrGetTestCase(TestCase): |
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fixtures = ['uid/dictsex'] |
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def test_get_or_create_obj(self): |
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sex = get_or_create_obj(DictSex, label="male") |
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self.assertIsInstance(sex, DictSex) |
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sex = get_or_create_obj(DictSex, label="foo") |
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self.assertIsInstance(sex, DictSex) |
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def test_update_or_create_obj(self): |
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sex = update_or_create_obj(DictSex, label="male", term="PATO_0000384") |
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self.assertIsInstance(sex, DictSex) |
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sex = update_or_create_obj(DictSex, label="foo", term="bar") |
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self.assertIsInstance(sex, DictSex) |
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cnr-ibba /
IMAGE-InjectTool
