submissions.tests.test_view_batch_update.SuccessfulFixValidationAnimalTest.setUp() - Code Metrics - Inspection of "Validation batch update" - cnr-ibba/IMAGE-InjectTool - Measure and Improve Code Quality continuously with Scrutinizer

Passed

Pull Request — master (#41)

by Paolo

created 2019-09-19 12:04 UTC

SuccessfulFixValidationAnimalTest.setUp() A

↳ Parent: submissions.tests.test_view_batch_update

Complexity

Conditions

Size

Total Lines	28
Code Lines	17

Duplication

Lines	28
Ratio	100 %

Importance

Changes

Metric	Value
eloc	17
dl	28
loc	28
rs	9.55
c	0
b	0
f	0
cc	1
nop	1

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Wed Sep 18 12:07:40 2019

@author: Paolo Cozzi <[email protected]>
"""

from unittest.mock import patch

from django.test import Client, TestCase
from django.urls import resolve, reverse

from common.constants import WAITING
from common.tests import GeneralMixinTestCase, OwnerMixinTestCase
from validation.models import ValidationSummary

from .common import SubmissionDataMixin
from ..views import SubmissionValidationSummaryFixErrorsView, FixValidation


class SubmissionValidationSummaryFixErrorsViewTest(
        GeneralMixinTestCase, OwnerMixinTestCase, TestCase):
    """Test SubmissionValidationSummaryViewTest View"""

    fixtures = [
        "image_app/user",
        "image_app/dictcountry",
        "image_app/dictrole",
        "image_app/organization",
        "image_app/submission",
        "validation/validationsummary"
    ]

    def setUp(self):
        # login a test user (defined in fixture)
        self.client = Client()
        self.client.login(username='test', password='test')

        self.url = reverse(
            'submissions:validation_summary_fix_errors',
            kwargs={
                'pk': 1,
                'type': 'animal',
                'message_counter': 0})

        self.response = self.client.get(self.url)

    def test_url_resolves_view(self):
        view = resolve('/submissions/1/validation_summary/animal/0/')
        self.assertIsInstance(
            view.func.view_class(),
            SubmissionValidationSummaryFixErrorsView)

    def test_view_not_found_status_code(self):
        url = reverse(
            'submissions:validation_summary_fix_errors',
            kwargs={
                'pk': 99,
                'type': 'animal',
                'message_counter': 0})
        response = self.client.get(url)
        self.assertEqual(response.status_code, 404)


class SubmissionValidationSummaryFixErrorsViewColumnTest(
        SubmissionDataMixin, TestCase):

    def setUp(self):
        # login a test user (defined in fixture)
        self.client = Client()
        self.client.login(username='test', password='test')

        self.url_animal = reverse(
            'submissions:validation_summary_fix_errors',
            kwargs={
                'pk': 1,
                'type': 'animal',
                'message_counter': 0})

        self.url_sample = reverse(
            'submissions:validation_summary_fix_errors',
            kwargs={
                'pk': 1,
                'type': 'sample',
                'message_counter': 0})

    def test_animal_age_issue(self):
        """Testing animal age column"""

        # is an animal VS
        vs = ValidationSummary.objects.get(pk=2)
        vs.messages = [
            ("{'message': 'Error: One of minutes, ... need to be present for "
             "the field Animal age at collection (specimen from organism "
             "section)', 'count': 1, 'ids': [1], 'offending_column': 'Animal "
             "age at collection'}")
        ]
        vs.save()

        # get animal page
        response = self.client.get(self.url_sample)
        self.assertEqual(response.status_code, 200)

    def test_accuracy_issue(self):
        """Testing animal age column"""

        # is an animal VS
        vs = ValidationSummary.objects.get(pk=1)
        vs.messages = [
            ("{'message': 'Error: .* of field .* is not in the valid values "
             "list .*', 'count': 1, 'ids': [1], 'offending_column': 'Birth "
             "location accuracy'}")
        ]
        vs.save()

        # get animal page
        response = self.client.get(self.url_animal)
        self.assertEqual(response.status_code, 200)

    def test_storage_processing_issue(self):
        """Testing sample storage processing column"""

        # is an animal VS
        vs = ValidationSummary.objects.get(pk=2)
        vs.messages = [
            ("{'message': 'Error: .* of field .* is not in the valid values "
             "list .*', 'count': 1, 'ids': [1], 'offending_column': 'Sample "
             "storage processing'}")
        ]
        vs.save()

        # get animal page
        response = self.client.get(self.url_sample)
        self.assertEqual(response.status_code, 200)

    def test_storage_issue(self):
        """Testing sample storage processing column"""

        # is an animal VS
        vs = ValidationSummary.objects.get(pk=2)
        vs.messages = [
            ("{'message': 'Error: .* of field .* is not in the valid values "
             "list .*', 'count': 1, 'ids': [1], 'offending_column': 'Sample "
             "storage'}")
        ]
        vs.save()

        # get animal page
        response = self.client.get(self.url_sample)
        self.assertEqual(response.status_code, 200)


class FixValidationMixin(

        SubmissionDataMixin, GeneralMixinTestCase):

    def tearDown(self):
        self.batch_update_patcher.stop()

        super().tearDown()

    def test_ownership(self):
        """Test a non-owner having a 404 response"""

        client = Client()
        client.login(username='test2', password='test2')

        response = client.post(
            self.url,
            self.data,
            follow=True
        )

        self.assertEqual(response.status_code, 404)

    def test_redirect(self):
        url = reverse('submissions:detail', kwargs={'pk': 1})
        self.assertRedirects(self.response, url)

    def test_update(self):
        """Asserting task called"""

        self.assertTrue(self.batch_update.called)

        self.submission.refresh_from_db()

        self.assertEqual(self.submission.status, WAITING)
        self.assertEqual(
            self.submission.message,
            "waiting for data updating")

    def test_message(self):
        """Assert message"""

        # check messages (defined in common.tests.MessageMixinTestCase
        self.check_messages(
            self.response,
            "warning",
            "waiting for data updating")


class SuccessfulFixValidationAnimalTest(

        FixValidationMixin, TestCase):

    def setUp(self):
        """call base method"""

        # call base method
        super().setUp()

        # defining patcher
        self.batch_update_patcher = patch(
            'animals.tasks.BatchUpdateAnimals.delay')
        self.batch_update = self.batch_update_patcher.start()

        # setting attribute
        self.attribute_to_edit = 'birth_location'

        self.url = reverse(
            'submissions:fix_validation',
            kwargs={
                'pk': 1,
                'record_type': 'animal',
                'attribute_to_edit': self.attribute_to_edit})

        self.data = {'to_edit1': 'Meow'}

        # get a response
        self.response = self.client.post(
            self.url,
            self.data,
            follow=True
        )

    def test_url_resolves_view(self):
        view = resolve('/submissions/1/fix_validation/animal/birth_location/')
        self.assertIsInstance(view.func.view_class(), FixValidation)

    def test_called_args(self):
        """Testing used arguments"""
        self.batch_update.assert_called_with(
            str(self.submission.id),
            {1: "Meow"},
            self.attribute_to_edit)


class SuccessfulFixValidationSampleTest(

        FixValidationMixin, TestCase):

    def setUp(self):
        """call base method"""

        # call base method
        super().setUp()

        # defining patcher
        self.batch_update_patcher = patch(
            'samples.tasks.BatchUpdateSamples.delay')
        self.batch_update = self.batch_update_patcher.start()

        # setting attribute
        self.attribute_to_edit = 'collection_place'

        self.url = reverse(
            'submissions:fix_validation',
            kwargs={
                'pk': 1,
                'record_type': 'sample',
                'attribute_to_edit': self.attribute_to_edit})

        self.data = {'to_edit1': 'Meow'}

        # get a response
        self.response = self.client.post(
            self.url,
            self.data,
            follow=True
        )

    def test_url_resolves_view(self):
        view = resolve(
            '/submissions/1/fix_validation/sample/collection_place/')
        self.assertIsInstance(view.func.view_class(), FixValidation)

    def test_called_args(self):
        """Testing used arguments"""
        self.batch_update.assert_called_with(
            str(self.submission.id),
            {1: "Meow"},
            self.attribute_to_edit)


1		#!/usr/bin/env python3
2		# -- coding: utf-8 --
3		"""
4		Created on Wed Sep 18 12:07:40 2019
5
6		@author: Paolo Cozzi <[email protected]>
7		"""
8
9		from unittest.mock import patch
10
11		from django.test import Client, TestCase
12		from django.urls import resolve, reverse
13
14		from common.constants import WAITING
15		from common.tests import GeneralMixinTestCase, OwnerMixinTestCase
16		from validation.models import ValidationSummary
17
18		from .common import SubmissionDataMixin
19		from ..views import SubmissionValidationSummaryFixErrorsView, FixValidation
20
21
22		class SubmissionValidationSummaryFixErrorsViewTest(
23		GeneralMixinTestCase, OwnerMixinTestCase, TestCase):
24		"""Test SubmissionValidationSummaryViewTest View"""
25
26		fixtures = [
27		"image_app/user",
28		"image_app/dictcountry",
29		"image_app/dictrole",
30		"image_app/organization",
31		"image_app/submission",
32		"validation/validationsummary"
33		]
34
35		def setUp(self):
36		# login a test user (defined in fixture)
37		self.client = Client()
38		self.client.login(username='test', password='test')
39
40		self.url = reverse(
41		'submissions:validation_summary_fix_errors',
42		kwargs={
43		'pk': 1,
44		'type': 'animal',
45		'message_counter': 0})
46
47		self.response = self.client.get(self.url)
48
49		def test_url_resolves_view(self):
50		view = resolve('/submissions/1/validation_summary/animal/0/')
51		self.assertIsInstance(
52		view.func.view_class(),
53		SubmissionValidationSummaryFixErrorsView)
54
55		def test_view_not_found_status_code(self):
56		url = reverse(
57		'submissions:validation_summary_fix_errors',
58		kwargs={
59		'pk': 99,
60		'type': 'animal',
61		'message_counter': 0})
62		response = self.client.get(url)
63		self.assertEqual(response.status_code, 404)
64
65
66		class SubmissionValidationSummaryFixErrorsViewColumnTest(
67		SubmissionDataMixin, TestCase):
68
69		def setUp(self):
70		# login a test user (defined in fixture)
71		self.client = Client()
72		self.client.login(username='test', password='test')
73
74		self.url_animal = reverse(
75		'submissions:validation_summary_fix_errors',
76		kwargs={
77		'pk': 1,
78		'type': 'animal',
79		'message_counter': 0})
80
81		self.url_sample = reverse(
82		'submissions:validation_summary_fix_errors',
83		kwargs={
84		'pk': 1,
85		'type': 'sample',
86		'message_counter': 0})
87
88		def test_animal_age_issue(self):
89		"""Testing animal age column"""
90
91		# is an animal VS
92		vs = ValidationSummary.objects.get(pk=2)
93		vs.messages = [
94		("{'message': 'Error: One of minutes, ... need to be present for "
95		"the field Animal age at collection (specimen from organism "
96		"section)', 'count': 1, 'ids': [1], 'offending_column': 'Animal "
97		"age at collection'}")
98		]
99		vs.save()
100
101		# get animal page
102		response = self.client.get(self.url_sample)
103		self.assertEqual(response.status_code, 200)
104
105		def test_accuracy_issue(self):
106		"""Testing animal age column"""
107
108		# is an animal VS
109		vs = ValidationSummary.objects.get(pk=1)
110		vs.messages = [
111		("{'message': 'Error: .* of field .* is not in the valid values "
112		"list .*', 'count': 1, 'ids': [1], 'offending_column': 'Birth "
113		"location accuracy'}")
114		]
115		vs.save()
116
117		# get animal page
118		response = self.client.get(self.url_animal)
119		self.assertEqual(response.status_code, 200)
120
121		def test_storage_processing_issue(self):
122		"""Testing sample storage processing column"""
123
124		# is an animal VS
125		vs = ValidationSummary.objects.get(pk=2)
126		vs.messages = [
127		("{'message': 'Error: .* of field .* is not in the valid values "
128		"list .*', 'count': 1, 'ids': [1], 'offending_column': 'Sample "
129		"storage processing'}")
130		]
131		vs.save()
132
133		# get animal page
134		response = self.client.get(self.url_sample)
135		self.assertEqual(response.status_code, 200)
136
137		def test_storage_issue(self):
138		"""Testing sample storage processing column"""
139
140		# is an animal VS
141		vs = ValidationSummary.objects.get(pk=2)
142		vs.messages = [
143		("{'message': 'Error: .* of field .* is not in the valid values "
144		"list .*', 'count': 1, 'ids': [1], 'offending_column': 'Sample "
145		"storage'}")
146		]
147		vs.save()
148
149		# get animal page
150		response = self.client.get(self.url_sample)
151		self.assertEqual(response.status_code, 200)
152
153
154	View Code Duplication	class FixValidationMixin(
		0 ignored issues – show Duplication introduced 2019-09-19 12:11 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
155		SubmissionDataMixin, GeneralMixinTestCase):
156
157		def tearDown(self):
158		self.batch_update_patcher.stop()
159
160		super().tearDown()
161
162		def test_ownership(self):
163		"""Test a non-owner having a 404 response"""
164
165		client = Client()
166		client.login(username='test2', password='test2')
167
168		response = client.post(
169		self.url,
170		self.data,
171		follow=True
172		)
173
174		self.assertEqual(response.status_code, 404)
175
176		def test_redirect(self):
177		url = reverse('submissions:detail', kwargs={'pk': 1})
178		self.assertRedirects(self.response, url)
179
180		def test_update(self):
181		"""Asserting task called"""
182
183		self.assertTrue(self.batch_update.called)
184
185		self.submission.refresh_from_db()
186
187		self.assertEqual(self.submission.status, WAITING)
188		self.assertEqual(
189		self.submission.message,
190		"waiting for data updating")
191
192		def test_message(self):
193		"""Assert message"""
194
195		# check messages (defined in common.tests.MessageMixinTestCase
196		self.check_messages(
197		self.response,
198		"warning",
199		"waiting for data updating")
200
201
202	View Code Duplication	class SuccessfulFixValidationAnimalTest(
		0 ignored issues – show Duplication introduced 2019-09-19 12:11 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
203		FixValidationMixin, TestCase):
204
205		def setUp(self):
206		"""call base method"""
207
208		# call base method
209		super().setUp()
210
211		# defining patcher
212		self.batch_update_patcher = patch(
213		'animals.tasks.BatchUpdateAnimals.delay')
214		self.batch_update = self.batch_update_patcher.start()
215
216		# setting attribute
217		self.attribute_to_edit = 'birth_location'
218
219		self.url = reverse(
220		'submissions:fix_validation',
221		kwargs={
222		'pk': 1,
223		'record_type': 'animal',
224		'attribute_to_edit': self.attribute_to_edit})
225
226		self.data = {'to_edit1': 'Meow'}
227
228		# get a response
229		self.response = self.client.post(
230		self.url,
231		self.data,
232		follow=True
233		)
234
235		def test_url_resolves_view(self):
236		view = resolve('/submissions/1/fix_validation/animal/birth_location/')
237		self.assertIsInstance(view.func.view_class(), FixValidation)
238
239		def test_called_args(self):
240		"""Testing used arguments"""
241		self.batch_update.assert_called_with(
242		str(self.submission.id),
243		{1: "Meow"},
244		self.attribute_to_edit)
245
246
247	View Code Duplication	class SuccessfulFixValidationSampleTest(
		0 ignored issues – show Duplication introduced 2019-09-19 12:11 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
248		FixValidationMixin, TestCase):
249
250		def setUp(self):
251		"""call base method"""
252
253		# call base method
254		super().setUp()
255
256		# defining patcher
257		self.batch_update_patcher = patch(
258		'samples.tasks.BatchUpdateSamples.delay')
259		self.batch_update = self.batch_update_patcher.start()
260
261		# setting attribute
262		self.attribute_to_edit = 'collection_place'
263
264		self.url = reverse(
265		'submissions:fix_validation',
266		kwargs={
267		'pk': 1,
268		'record_type': 'sample',
269		'attribute_to_edit': self.attribute_to_edit})
270
271		self.data = {'to_edit1': 'Meow'}
272
273		# get a response
274		self.response = self.client.post(
275		self.url,
276		self.data,
277		follow=True
278		)
279
280		def test_url_resolves_view(self):
281		view = resolve(
282		'/submissions/1/fix_validation/sample/collection_place/')
283		self.assertIsInstance(view.func.view_class(), FixValidation)
284
285		def test_called_args(self):
286		"""Testing used arguments"""
287		self.batch_update.assert_called_with(
288		str(self.submission.id),
289		{1: "Meow"},
290		self.attribute_to_edit)
291

cnr-ibba / IMAGE-InjectTool

Pull Request — master (#41)

SuccessfulFixValidationAnimalTest.setUp() A

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Duplication

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