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#!/usr/bin/env python3 |
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# -*- coding: utf-8 -*- |
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""" |
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Created on Thu Oct 25 13:34:43 2018 |
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@author: Paolo Cozzi <[email protected]> |
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""" |
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from unittest.mock import patch, Mock |
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from django.test import TestCase |
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from image_app.models import ( |
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DictBreed, DictCountry, DictSpecie, DictUberon, DictDevelStage, |
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DictPhysioStage) |
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from ..tasks import ( |
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AnnotateBreeds, AnnotateCountries, AnnotateSpecies, AnnotateOrganismPart, |
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AnnotateDevelStage, AnnotatePhysioStage, AnnotateAll) |
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class TestAnnotateBreeds(TestCase): |
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"""A class to test annotate breeds""" |
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fixtures = [ |
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"image_app/dictbreed", |
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"image_app/dictcountry", |
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"image_app/dictspecie" |
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] |
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def setUp(self): |
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self.my_task = AnnotateBreeds() |
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# get a breed object |
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breed = DictBreed.objects.get(pk=1) |
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# erase attributes |
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breed.mapped_breed = None |
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breed.mapped_breed_term = None |
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breed.confidence = None |
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breed.save() |
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@patch("zooma.tasks.AnnotateBreeds.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateCountries(TestCase): |
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"""A class to test annotate countries""" |
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fixtures = [ |
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"image_app/dictcountry", |
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] |
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def setUp(self): |
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self.my_task = AnnotateCountries() |
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# get a country object |
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country = DictCountry.objects.get(pk=1) |
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# erase attributes |
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country.term = None |
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country.confidence = None |
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country.save() |
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@patch("zooma.tasks.AnnotateCountries.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateSpecies(TestCase): |
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"""A class to test annotate species""" |
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fixtures = [ |
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"image_app/dictspecie", |
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] |
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def setUp(self): |
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self.my_task = AnnotateSpecies() |
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# get a specie object |
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specie = DictSpecie.objects.get(pk=1) |
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# erase attributes |
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specie.term = None |
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specie.confidence = None |
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specie.save() |
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@patch("zooma.tasks.AnnotateSpecies.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateUberon(TestCase): |
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"""A class to test annotate uberon""" |
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fixtures = [ |
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"image_app/dictuberon", |
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] |
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def setUp(self): |
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self.my_task = AnnotateOrganismPart() |
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# get a specie object |
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part = DictUberon.objects.get(pk=1) |
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# erase attributes |
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part.term = None |
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part.confidence = None |
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part.save() |
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@patch("zooma.tasks.AnnotateOrganismPart.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateDictDevelStage(TestCase): |
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"""A class to test annotate developmental stages""" |
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fixtures = [ |
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"image_app/dictstage", |
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] |
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def setUp(self): |
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self.my_task = AnnotateDevelStage() |
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# get a specie object |
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stage = DictDevelStage.objects.get(pk=1) |
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# erase attributes |
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stage.term = None |
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stage.confidence = None |
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stage.save() |
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@patch("zooma.tasks.AnnotateDevelStage.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateDictPhysioStage(TestCase): |
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"""A class to test annotate physiological stages""" |
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fixtures = [ |
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"image_app/dictstage", |
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] |
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def setUp(self): |
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self.my_task = AnnotatePhysioStage() |
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# get a specie object |
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stage = DictPhysioStage.objects.get(pk=1) |
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# erase attributes |
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stage.term = None |
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stage.confidence = None |
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stage.save() |
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@patch("zooma.tasks.AnnotatePhysioStage.annotate_func") |
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def test_task(self, my_func): |
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res = self.my_task.run() |
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# assert a success |
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self.assertEqual(res, "success") |
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self.assertTrue(my_func.called) |
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class TestAnnotateAll(TestCase): |
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def setUp(self): |
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# calling my base setup |
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super().setUp() |
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# patching objects |
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self.mock_group_patcher = patch('zooma.tasks.group') |
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self.mock_group = self.mock_group_patcher.start() |
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# define a group result object |
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result = Mock() |
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result.waiting.side_effect = [True, False] |
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result.join.return_value = ["success"] * 6 |
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self.mock_group.return_value.delay.return_value = result |
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# define my task |
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self.my_task = AnnotateAll() |
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# change lock_id (useful when running test during cron) |
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self.my_task.lock_id = "test-AnnotateAll" |
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def tearDown(self): |
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# stopping mock objects |
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self.mock_group_patcher.stop() |
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# calling base object |
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super().tearDown() |
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def test_annotateall(self): |
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"""Test AnnotateAll while a lock is present""" |
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res = self.my_task.run() |
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# assert success in annotation |
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self.assertEqual(res, "success") |
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# assert mock objects called |
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self.assertTrue(self.mock_group.called) |
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self.assertTrue(self.mock_group.return_value.delay.called) |
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# Test a non blocking instance |
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@patch("redis.lock.Lock.acquire", return_value=False) |
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def test_annotateall_nb(self, my_lock): |
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"""Test AnnotateAll while a lock is present""" |
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res = self.my_task.run() |
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# assert database is locked |
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self.assertEqual(res, "%s already running!" % (self.my_task.name)) |
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# assert mock objects called |
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self.assertFalse(self.mock_group.called) |
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cnr-ibba /
IMAGE-InjectTool
