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@@ 90-119 (lines=30) @@
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| 87 |
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self.assertTrue(my_read.called) |
| 88 |
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self.assertTrue(mock_get.called) |
| 89 |
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| 90 |
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@patch("requests.get") |
| 91 |
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@patch("validation.helpers.validation.read_in_ruleset") |
| 92 |
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@patch("validation.helpers.validation.check_ruleset", |
| 93 |
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return_value=[]) |
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def test_check_biosample_id_issue(self, my_check, my_read, mock_get): |
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"""No valid biosample is found for this object""" |
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# paching response |
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response = Mock() |
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response.status_code = 404 |
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mock_get.return_value = response |
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# create a fake ValidationResultRecord |
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record_result = ValidationResultRecord(record_id="test") |
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# get a metadata object |
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metadata = MetaDataValidation() |
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# check biosample object |
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record_result = metadata.check_biosample_id_target( |
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"FAKEA123456", "test", record_result) |
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# test Warning status and one message |
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self.assertEqual(record_result.get_overall_status(), 'Warning') |
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self.assertEqual(len(record_result.get_messages()), 1) |
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# assert my methods called |
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self.assertTrue(my_check.called) |
| 118 |
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self.assertTrue(my_read.called) |
| 119 |
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self.assertTrue(mock_get.called) |
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| 122 |
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class SubmissionMixin(PersonMixinTestCase): |
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@@ 59-88 (lines=30) @@
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# test mocked function called |
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self.assertTrue(my_issue.called) |
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| 59 |
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@patch("requests.get") |
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@patch("validation.helpers.validation.read_in_ruleset") |
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@patch("validation.helpers.validation.check_ruleset", |
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return_value=[]) |
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def test_check_biosample_id_target(self, my_check, my_read, mock_get): |
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"""Test fecthing biosample ids from MetaDataValidation""" |
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# paching response |
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response = Mock() |
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response.status_code = 200 |
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mock_get.return_value = response |
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| 71 |
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# create a fake ValidationResultRecord |
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record_result = ValidationResultRecord(record_id="test") |
| 73 |
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| 74 |
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# get a metadata object |
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metadata = MetaDataValidation() |
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| 77 |
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# check biosample object |
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record_result = metadata.check_biosample_id_target( |
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"FAKEA123456", "test", record_result) |
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# test pass status and no messages |
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self.assertEqual(record_result.get_overall_status(), 'Pass') |
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self.assertEqual(record_result.get_messages(), []) |
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| 85 |
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# assert my methods called |
| 86 |
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self.assertTrue(my_check.called) |
| 87 |
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self.assertTrue(my_read.called) |
| 88 |
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self.assertTrue(mock_get.called) |
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|
| 90 |
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@patch("requests.get") |
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@patch("validation.helpers.validation.read_in_ruleset") |
cnr-ibba /
IMAGE-InjectTool
