|
1
|
|
|
|
|
2
|
|
|
import os |
|
3
|
|
|
|
|
4
|
|
|
import numpy as np |
|
5
|
|
|
import pytest |
|
6
|
|
|
from click.testing import CliRunner |
|
7
|
|
|
from numpy.random import rand |
|
8
|
|
|
from numpy.random import randint |
|
9
|
|
|
from numpy.random import seed |
|
10
|
|
|
from scipy import integrate |
|
11
|
|
|
|
|
12
|
|
|
from ne2001 import density |
|
13
|
|
|
from ne2001 import ne_io |
|
14
|
|
|
from ne2001 import utils |
|
15
|
|
|
from ne2001.cli import main |
|
16
|
|
|
|
|
17
|
|
|
PARAMS = ne_io.Params() |
|
18
|
|
|
density.set_xyz_sun(np.array([0, 8.5, 0])) |
|
19
|
|
|
|
|
20
|
|
|
|
|
21
|
|
|
def test_main(): |
|
22
|
|
|
runner = CliRunner() |
|
23
|
|
|
result = runner.invoke(main, []) |
|
24
|
|
|
|
|
25
|
|
|
assert result.output == '()\n' |
|
26
|
|
|
assert result.exit_code == 0 |
|
27
|
|
|
|
|
28
|
|
|
|
|
29
|
|
|
def test_density(): |
|
30
|
|
|
xyz = (1-2*rand(3, 100)) * 20 |
|
31
|
|
|
|
|
32
|
|
|
ne_disk1 = density.NEobject(density.thick_disk, |
|
33
|
|
|
**PARAMS['thick_disk']).ne(xyz) |
|
34
|
|
|
assert len(ne_disk1) == 100 |
|
35
|
|
|
assert all(ne_disk1 >= 0) |
|
36
|
|
|
|
|
37
|
|
|
ne_disk2 = density.NEobject(density.thin_disk, **PARAMS['thin_disk']).ne(xyz) |
|
38
|
|
|
assert ne_disk2.size == 100 |
|
39
|
|
|
assert all(ne_disk2 >= 0) |
|
40
|
|
|
|
|
41
|
|
|
ne_gc = density.NEobject(density.gc, **PARAMS['galactic_center']).ne(xyz) |
|
42
|
|
|
assert len(ne_gc) == 100 |
|
43
|
|
|
assert all(ne_gc >= 0) |
|
44
|
|
|
|
|
45
|
|
|
|
|
46
|
|
|
def test_geometry(): |
|
47
|
|
|
ellipsoid = rand(3)*20 |
|
48
|
|
|
xyz = (1-2*rand(3, 100)) * 20 |
|
49
|
|
|
theta = rand()*2*np.pi |
|
50
|
|
|
center = rand(3)*20 |
|
51
|
|
|
assert density.in_ellipsoid(center, ellipsoid, theta)(center) |
|
52
|
|
|
assert len(density.in_ellipsoid(center, ellipsoid, theta)(xyz)) == 100 |
|
53
|
|
|
|
|
54
|
|
|
cylinder = rand(3)*20 |
|
55
|
|
|
xyz = (1-2*rand(3, 100)) * 20 |
|
56
|
|
|
theta = rand()*2*np.pi |
|
57
|
|
|
center = rand(3)*20 |
|
58
|
|
|
assert len(density.in_cylinder(xyz, center, cylinder, theta)) == 100 |
|
59
|
|
|
|
|
60
|
|
|
assert all(density.in_half_sphere(xyz, center, 10)[xyz[-1] < 0] == 0) |
|
61
|
|
|
|
|
62
|
|
|
|
|
63
|
|
|
def test_clumps(): |
|
64
|
|
|
clumps_file = os.path.join(os.path.split(density.__file__)[0], "data", |
|
65
|
|
|
"neclumpN.NE2001.dat") |
|
66
|
|
|
|
|
67
|
|
|
clumps = density.Clumps(clumps_file) |
|
68
|
|
|
|
|
69
|
|
|
clumps = density.Clumps() |
|
70
|
|
|
xyz = (clumps.xyz.T[randint(0, clumps.gl.size, 100)].T + |
|
71
|
|
|
(1-2*rand(3, 100))*0.01) |
|
72
|
|
|
|
|
73
|
|
|
ne_clumps = clumps.ne(xyz) |
|
74
|
|
|
assert len(ne_clumps) == 100 |
|
75
|
|
|
ix = ne_clumps.argmax() |
|
76
|
|
|
assert ne_clumps[ix] == clumps.ne(xyz[:, ix]) |
|
77
|
|
|
|
|
78
|
|
|
|
|
79
|
|
|
def test_void(): |
|
80
|
|
|
tol = 1e-3 |
|
81
|
|
|
voids_file = os.path.join(os.path.split(density.__file__)[0], "data", |
|
82
|
|
|
"nevoidN.NE2001.dat") |
|
83
|
|
|
|
|
84
|
|
|
voids = density.Voids(voids_file) |
|
85
|
|
|
|
|
86
|
|
|
voids = density.Voids() |
|
87
|
|
|
|
|
88
|
|
|
xyz = (voids.xyz.T[randint(0, voids.gl.size, 100)].T + |
|
89
|
|
|
(1-2*rand(3, 100))*0.01) |
|
90
|
|
|
|
|
91
|
|
|
ne_voids = voids.ne(xyz) |
|
92
|
|
|
assert len(ne_voids) == 100 |
|
93
|
|
|
|
|
94
|
|
|
ix = ne_voids.argmax() |
|
95
|
|
|
assert ne_voids[ix] == voids.ne(xyz[:, ix]) |
|
96
|
|
|
l, b, d = -2, 12, 1 |
|
97
|
|
|
DM = 0.9308054 |
|
98
|
|
|
assert abs(voids.DM(l, b, d).value - DM)/DM < tol |
|
99
|
|
|
|
|
100
|
|
|
|
|
101
|
|
|
def test_local_ism(): |
|
102
|
|
|
tol = 1e-3 |
|
103
|
|
|
xyz = (1-2*rand(3, 100)) * 20 |
|
104
|
|
|
local_ism = density.LocalISM(**PARAMS) |
|
105
|
|
|
|
|
106
|
|
|
assert all(local_ism.ne(xyz) >= 0) |
|
107
|
|
|
assert len(local_ism.ne(xyz)) == 100 |
|
108
|
|
|
l, b, d = -2, 12, 1 |
|
109
|
|
|
DM = 2.453550 |
|
110
|
|
|
assert (abs(local_ism.DM(l, b, d).value - |
|
111
|
|
|
DM)/DM < tol) |
|
112
|
|
|
|
|
113
|
|
|
def test_DM(): |
|
114
|
|
|
tol = 1e-3 |
|
115
|
|
|
d1 = density.NEobject(density.thick_disk, **PARAMS['thick_disk']) |
|
116
|
|
|
xyz = np.array([0.1503843, 7.647129, 0.5000018]) |
|
117
|
|
|
l, b, d = 10, 30, 1 |
|
118
|
|
|
DM = 32.36372 |
|
119
|
|
|
assert abs(d1.DM(l, b, d).value - DM) / DM < tol |
|
120
|
|
|
|
|
121
|
|
|
|
|
122
|
|
|
d2 = density.NEobject(density.thin_disk, |
|
123
|
|
|
**PARAMS['thin_disk']) |
|
124
|
|
|
|
|
125
|
|
|
|
|
126
|
|
|
l, b, d = 10, 30, 1 |
|
127
|
|
|
DM = 0.046937 |
|
128
|
|
|
assert abs(d2.DM(l, b, d).value - DM) / DM < tol |
|
129
|
|
|
|
|
130
|
|
|
|
|
131
|
|
|
def test_electron_density_quad(): |
|
132
|
|
|
tol = 1e-3 |
|
133
|
|
|
ne = density.ElectronDensity() |
|
134
|
|
|
l, b, d = -2, 12, 1 |
|
135
|
|
|
DM = 23.98557 |
|
136
|
|
|
assert abs(ne.DM(l, b, d).value - DM)/DM < tol |
|
137
|
|
|
|
|
138
|
|
|
|
|
139
|
|
|
def test_electron_density_trapz(): |
|
140
|
|
|
tol = 1e-3 |
|
141
|
|
|
ne = density.ElectronDensity() |
|
142
|
|
|
l, b, d = -2, 12, 1 |
|
143
|
|
|
DM = 23.98557 |
|
144
|
|
|
assert abs(ne.DM(l, b, d, integrator=integrate.trapz).value - DM)/DM < tol |
|
145
|
|
|
|
|
146
|
|
|
|
|
147
|
|
|
def test_dist(): |
|
148
|
|
|
seed(123) |
|
149
|
|
|
for i in range(1): |
|
150
|
|
|
tol = 0.1 |
|
151
|
|
|
ne = density.ElectronDensity() |
|
152
|
|
|
l = rand()*360 |
|
153
|
|
|
b = np.arccos(1 - 2*rand())/np.pi*180 |
|
154
|
|
|
d = rand()*5 |
|
155
|
|
|
DM = ne.DM(l, b, d) |
|
156
|
|
|
d_DM = ne.dist(l, b, DM) |
|
157
|
|
|
err = abs(d_DM.value - d)/d |
|
158
|
|
|
print(err, l, b, d, d_DM) |
|
159
|
|
|
assert err < tol, (l, b, d) |
|
160
|
|
|
|
benbaror /
ne2001
