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# -*- coding: utf-8 -*- |
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# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*- |
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# vi: set ft=python sts=4 ts=4 sw=4 et: |
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import pytest |
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import os.path as op |
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from hansel import mktree |
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from hansel.utils import ParameterGrid |
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from test_crumb import tmp_crumb |
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def test_mktree1(tmp_crumb): |
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assert not op.exists(tmp_crumb.split()[0]) |
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nupaths = mktree(tmp_crumb, None) |
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assert all([op.exists(npath) for npath in nupaths]) |
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pytest.raises(TypeError, mktree, tmp_crumb, 'hansel') |
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def test_mktree_dicts(tmp_crumb): |
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assert not op.exists(tmp_crumb.split()[0]) |
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values_map = {'session_id': ['session_' + str(i) for i in range(2)], |
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'subject_id': ['subj_' + str(i) for i in range(3)]} |
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nupaths = mktree(tmp_crumb, list(ParameterGrid(values_map))) |
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assert all([op.exists(npath) for npath in nupaths]) |
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values_map['grimm'] = ['Jacob', 'Wilhelm'] |
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pytest.raises(ValueError, mktree, tmp_crumb, list(ParameterGrid(values_map))) |
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def test_mktree_tuples(tmp_crumb): |
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assert not op.exists(tmp_crumb.split()[0]) |
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session_ids = ['session_' + str(i) for i in range(2)] |
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subj_ids = ['subj_' + str(i) for i in range(3)] |
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values_dict = {'session_id': session_ids, |
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'subject_id': subj_ids} |
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values_map = list(ParameterGrid(values_dict)) |
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values_tups = [tuple(d.items()) for d in values_map] |
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nupaths = mktree(tmp_crumb, values_tups) |
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assert all([op.exists(npath) for npath in nupaths]) |
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ls_session_ids = tmp_crumb.ls('session_id', |
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fullpath = False, |
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make_crumbs = False, |
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duplicates = False, |
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check_exists = False) |
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assert ls_session_ids == session_ids |
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ls_subj_ids = tmp_crumb.ls('subject_id', |
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fullpath = False, |
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make_crumbs = False, |
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duplicates = False, |
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check_exists = False) |
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assert ls_subj_ids == subj_ids |
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def test_mktree_raises(tmp_crumb): |
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assert not op.exists(tmp_crumb.split()[0]) |
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values_dict = {'session_id': ['session_' + str(i) for i in range(2)], |
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'subject_id': ['subj_' + str(i) for i in range(3)], |
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'modality': ['anat', 'rest', 'pet'], |
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'image': ['mprage.nii', 'rest.nii', 'pet.nii'], |
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} |
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del values_dict['session_id'] |
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del values_dict['modality'] |
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pytest.raises(KeyError, mktree, tmp_crumb, list(ParameterGrid(values_dict))) |
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alexsavio /
hansel
