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@@ 86-120 (lines=35) @@
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@cli.command(context_settings=CONTEXT_SETTINGS) |
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@click.argument('src_crumb', type=CrumbPath(), callback=check_not_none) |
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@click.argument('dst_crumb', type=CrumbPath(), callback=check_not_none) |
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@click.option('-q', '--quiet', is_flag=True, flag_value=True, |
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help='Flag to remove verbose.') |
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@click.option('-e', '--exist_ok', is_flag=True, flag_value=True, |
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help='Flag to allow overwriting destination path.') |
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@click.option('-i', '--ignore', type=str, multiple=True, |
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help='A global ignore fnmatch expression for the listing. ' |
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'You can add as many of this argument as you want. ' |
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'Example: ".*" or "*~"') |
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def link(src_crumb, dst_crumb, link, quiet, ignore, exist_ok): |
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"""Uses hansel.Crumb to link one file tree to another file tree. The |
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structure of the destination tree can be modified. |
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Only the leaf nodes will be linked, the folder structure above will be |
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created. |
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Examples: \n |
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crumb link "/data/hansel/cobre/{sid}/{session}/{img}" "/data/hansel/cobre2/{sid}/{img}" \n |
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crumb link "cobre/{sid}/{session}/{img:anat*}" "cobre_anat/{sid}/{img}" \n |
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""" |
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from .. import crumb_copy |
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if ignore: |
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src_crumb._ignore = ignore |
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dst_crumb._ignore = ignore |
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if not src_crumb.ls(): |
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click.echo('Could not find any file that matched {}.'.format(src_crumb)) |
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exit(-1) |
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crumb_copy(src_crumb, dst_crumb, |
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make_links=True, |
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exist_ok=exist_ok, |
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verbose=(not quiet)) |
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@cli.command(context_settings=CONTEXT_SETTINGS) |
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@@ 50-82 (lines=33) @@
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echo_list(lst) |
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@cli.command(context_settings=CONTEXT_SETTINGS) |
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@click.argument('src_crumb', type=CrumbPath(), callback=check_not_none) |
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@click.argument('dst_crumb', type=CrumbPath(), callback=check_not_none) |
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@click.option('-q', '--quiet', is_flag=True, flag_value=True, |
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help='Flag to remove verbose.') |
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@click.option('-e', '--exist_ok', is_flag=True, flag_value=True, |
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help='Flag to allow overwriting destination path.') |
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@click.option('-i', '--ignore', type=str, multiple=True, |
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help='A global ignore fnmatch expression for the listing. ' |
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'You can add as many of this argument as you want. ' |
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'Example: ".*" or "*~"') |
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def copy(src_crumb, dst_crumb, link, quiet, ignore, exist_ok): |
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"""Uses hansel.Crumb to copy one file tree to another file tree. The |
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structure of the destination tree can be modified. |
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Examples: \n |
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crumb copy "/data/hansel/cobre/{sid}/{session}/{img}" "/data/hansel/cobre2/{sid}/{img}" \n |
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crumb copy "cobre/{sid}/{session}/{img:anat*}" "cobre_anat/{sid}/{img}" \n |
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""" |
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from .. import crumb_copy |
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if ignore: |
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src_crumb._ignore = ignore |
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dst_crumb._ignore = ignore |
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if not src_crumb.ls(): |
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click.echo('Could not find any file that matched {}.'.format(src_crumb)) |
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exit(-1) |
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crumb_copy(src_crumb, dst_crumb, |
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make_links=False, |
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exist_ok=exist_ok, |
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verbose=(not quiet)) |
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alexsavio /
hansel
