CameraThorlabs._connect_camera() - Code Metrics - Inspection of "New features - camera - steppers - pid - doc" - Ulm-IQO/qudi - Measure and Improve Code Quality continuously with Scrutinizer

Completed

Pull Request — master (#380)

unknown

created 2018-05-15 14:27 UTC

CameraThorlabs._connect_camera() A

↳ Parent: CameraThorlabs

Complexity

Conditions

Size

Total Lines

Duplication

Lines	0
Ratio	0 %

Importance

Changes

Metric	Value
cc	3
c	0
b	0
f	0
dl	0
loc	17
rs	9.4285

# -*- coding: utf-8 -*-

"""
This hardware module implement the camera interface to use an Thorlabs Camera.
It use a dll to inteface with the instruments via USB (only available physical interface)
This module does aim at replacing ThorCam.

---

Qudi is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

Qudi is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with Qudi. If not, see <http://www.gnu.org/licenses/>.

Copyright (c) the Qudi Developers. See the COPYRIGHT.txt file at the
top-level directory of this distribution and at <https://github.com/Ulm-IQO/qudi/>
"""

import platform
import ctypes
from ctypes import *

import numpy as np

from core.module import Base, ConfigOption
from interface.camera_interface import CameraInterface
from .uc480_h import *


class CameraThorlabs(Base, CameraInterface):
    """
    Main class of the module
    """

    _modtype = 'camera'
    _modclass = 'hardware'

    _default_exposure = ConfigOption('default_exposure', 0.1)
    _default_gain = ConfigOption('_default_gain', 1.0)
    _id_camera = ConfigOption('id_camera', 0)  # if more than one camera is present

    _dll = None
    _camera_handle = None
    _exposure = _default_exposure
    _gain = _default_gain
    _width = 0
    _height = 0
    _pos_x = 0
    _pos_y = 0
    _bit_depth = 0
    _cam = None
    _acquiring = False
    _live = False
    _last_acquisition_mode = None  # useful if config changes during acq
    _sensor_info = None

    _image_memory = None
    _image_pid = None

    def on_activate(self):
        """ Initialisation performed during activation of the module.
         """

        # Load the dll if present
        self._load_dll()
        self._connect_camera()
        self._init_camera()

    def _check_error(self, code, message):
        """
        Check that the code means OK and log message as error if not. Return True if OK, False otherwise.

        """
        if code != IS_SUCCESS:
                self.log.error(message)
                return False
        else:
            return True

    def _check_int_range(self, value, mini, maxi ,message):
        """
        Check that value is in the range [mini, maxi] and log message as error if not. Return True if OK.

        """
        if value < mini or value > maxi:
                self.log.error('{} - Value {} must be between {} and {}'.format(message, value, mini, maxi))
                return False
        else:
            return True

    def _load_dll(self):
        """
        Load the dll for the camera
        """
        try:
            if platform.system() == "Windows":
                if platform.architecture()[0] == "64bit":
                    self._dll = ctypes.cdll.uc480_64
                else:
                    self._dll = ctypes.cdll.uc480
            # for Linux
            elif platform.system() == "Linux":
                self._dll = ctypes.cdll.LoadLibrary('libueye_api.so')
            else:
                self.log.error("Can not detect operating system to load Thorlabs DLL.")
        except OSError:
            self.log.error("Can not log Thorlabs DLL.")

    def _connect_camera(self):
        """
        Connect to the camera and get basic info on it
        """
        number_of_cameras = ctypes.c_int(0)
        self._dll.is_GetNumberOfCameras(byref(number_of_cameras))
        if number_of_cameras.value < 1:
            self.log.error("No Thorlabs camera detected.")
        elif number_of_cameras.value - 1 < self._id_camera:
            self.log.error("A Thorlabs camera has been detected but the id specified above the number of camera(s)")
        else:
            self._camera_handle = ctypes.c_int(0)
            ret = self._dll.is_InitCamera(ctypes.pointer(self._camera_handle))
            self._check_error(ret, "Could not initialize camera")
            self._sensor_info = SENSORINFO()
            self._dll.is_GetSensorInfo(self._camera_handle, byref(self._sensor_info))
            self.log.debug('Connected to camera : {}'.format(str(self._sensor_info.strSensorName)))

    def _init_camera(self):
        """
        Set the parameters of the camera for our usage
        """
        # Color mode
        code = self._dll.is_SetColorMode(self._camera_handle, ctypes.c_int(IS_SET_CM_Y8))
        self._check_error(code, "Could set color mode IS_SET_CM_Y8")
        self._bit_depth = 8
        # Image size
        self.set_image_size(self._sensor_info.nMaxWidth, self._sensor_info.nMaxHeight)
        # Image position
        self.set_image_position(0, 0)
        # Binning
        code = self._dll.is_SetBinning(self._camera_handle, ctypes.c_int(0))  # Disable binning
        self._check_error(code, "Could set binning disabled")
        # Sub sampling
        code = self._dll.is_SetSubSampling(self._camera_handle, ctypes.c_int(0))  # Disable sub sampling
        self._check_error(code, "Could set sub sampling disabled")
        # Allocate image memory
        self._image_pid = ctypes.c_int()
        self._image_memory = ctypes.c_char_p()
        code = self._dll.is_AllocImageMem(
            self._camera_handle, self._width, self._height,
            self._bit_depth, byref(self._image_memory), byref(self._image_pid))
        self._check_error(code, "Could not allocate image memory")
        # Set image memory
        code = self._dll.is_SetImageMem(self._camera_handle, self._image_memory, self._image_pid)
        self._check_error(code, "Could not set image memory")
        # Set auto exit
        code = self._dll.is_EnableAutoExit(self._camera_handle, 1)  # Enable auto-exit
        self._check_error(code, "Could not set auto exit")

        self.set_exposure(self._exposure)
        self.set_gain(self._gain)

    def set_image_size(self, width=None, height=None):

        """
        Set the size of the image, here the camera will acquire only part of the image from a given position
        """
        if width is not None:
            width = int(width)
            self._check_int_range(width, 1, self._sensor_info.nMaxWidth, 'Can not set image width')
            self._width = width
        if height is not None:
            height = int(height)
            self._check_int_range(height, 1, self._sensor_info.nMaxHeight, 'Can not set image height')
            self._height = height

        code = self._dll.is_SetImageSize(self._camera_handle, ctypes.c_int(self._width), ctypes.c_int(self._height))
        return self._check_error(code, "Could not set image size")

    def set_image_position(self, pos_x, pos_y):

        """
        Set image position reference coordinate
        """
        if pos_x is not None:
            pos_x = int(pos_x)
            self._check_int_range(pos_x, 0, self._sensor_info.nMaxWidth-1, 'Can not set image position x')
            self._pos_x = pos_x
        if pos_y is not None:
            pos_y = int(pos_y)
            self._check_int_range(pos_y, 0, self._sensor_info.nMaxHeight-1, 'Can not set image position y')
            self._pos_y = pos_y

        code = self._dll.is_SetImagePos(self._camera_handle, ctypes.c_int(self._pos_x), ctypes.c_int(self._pos_y))
        return self._check_error(code, "Could not set image position")


    def on_deactivate(self):
        """
        Deinitialisation performed during deactivation of the module.
        """
        self._dll.is_ExitCamera(self._camera_handle)
        self._acquiring = False
        self._live = False

    def get_name(self):
        """
        Return a name for the camera
        """
        return self._sensor_info.strSensorName

    def get_size(self):
        """
        Return the max size of the camera
        """
        return self._width, self._height

    def support_live_acquisition(self):
        """
        Return whether or not this camera support live acquisition
        """
        return True

    def start_live_acquisition(self):
        """
        Set the camera in live mode
        """
        if self.get_ready_state():
            self._acquiring = True
            self._live = True
            code = self._dll.is_CaptureVideo(self._camera_handle, c_int(IS_DONT_WAIT))
            no_error = self._check_error(code, "Could not start live acquisition")
            if not no_error:
                self._acquiring = False
                self._live = False
                return False
            return True
        else:
            return False

    def start_single_acquisition(self):
        """
        Start the acquisition of a single image
        """
        if self.get_ready_state():
            self._acquiring = True
            code = self._dll.is_FreezeVideo(self._camera_handle, c_int(IS_WAIT))
            self._acquiring = False
            return self._check_error(code, "Could not start single acquisition")
        else:
            return False

    def stop_acquisition(self):
        """
        Stop live acquisition
        """
        no_error = True
        if self._acquiring:
            code = self._dll.is_StopLiveVideo(self._camera_handle, c_int(IS_FORCE_VIDEO_STOP))
            no_error = self._check_error(code, "Could not stop acquisition")
        self._acquiring = False
        self._live = False
        return no_error

    def get_acquired_data(self):
        """
        Return last acquired data from the dll
        """
        # Allocate memory for image:
        img_size = self._width * self._height
        c_array = ctypes.c_char * img_size
        c_img = c_array()
        # copy camera memory to accessible memory
        code = self._dll.is_CopyImageMem(self._camera_handle, self._image_memory, self._image_pid, c_img)
        self._check_error(code, "Could copy image to memory")
        # Convert to numpy 2d array of float from 0 to 1
        img_array = np.frombuffer(c_img, dtype=ctypes.c_ubyte)
        img_array = img_array.astype(float)
        img_array.shape = np.array((self._height, self._width))

        return img_array

    def get_bit_depth(self):
        """
        Return the bit depth of the image
        """
        return self._bit_depth

    def set_exposure(self, time):
        """
        Set the exposure in second
        Return the new exposure
        """
        exp = c_double(time * 1e3)  # in ms
        new_exp = c_double(0)
        code = self._dll.is_SetExposureTime(self._camera_handle, exp, byref(new_exp))
        self._check_error(code, "Could not set exposure")
        self._exposure = float(new_exp.value)/1000  # in ms
        return self._exposure

    def get_exposure(self):
        """
        Return current exposure
        """
        return self._exposure

    def get_ready_state(self):
        """
        Return whether or not the camera is ready for an acquisition
        """
        if self.module_state()!='idle':
            return False
        return not self._acquiring

    def set_gain(self, gain):
        """
        Set the gain
        """
        pass

    def get_gain(self):
        """
        Get the gain
        """
        return self._gain



1		# -- coding: utf-8 --
2
3		"""
4		This hardware module implement the camera interface to use an Thorlabs Camera.
5		It use a dll to inteface with the instruments via USB (only available physical interface)
6		This module does aim at replacing ThorCam.
7
8		---
9
10		Qudi is free software: you can redistribute it and/or modify
11		it under the terms of the GNU General Public License as published by
12		the Free Software Foundation, either version 3 of the License, or
13		(at your option) any later version.
14
15		Qudi is distributed in the hope that it will be useful,
16		but WITHOUT ANY WARRANTY; without even the implied warranty of
17		MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
18		GNU General Public License for more details.
19
20		You should have received a copy of the GNU General Public License
21		along with Qudi. If not, see <http://www.gnu.org/licenses/>.
22
23		Copyright (c) the Qudi Developers. See the COPYRIGHT.txt file at the
24		top-level directory of this distribution and at <https://github.com/Ulm-IQO/qudi/>
25		"""
26
27		import platform
28		import ctypes
29		from ctypes import *
30
31		import numpy as np
32
33		from core.module import Base, ConfigOption
34		from interface.camera_interface import CameraInterface
35		from .uc480_h import *
36
37
38		class CameraThorlabs(Base, CameraInterface):
39		"""
40		Main class of the module
41		"""
42
43		_modtype = 'camera'
44		_modclass = 'hardware'
45
46		_default_exposure = ConfigOption('default_exposure', 0.1)
47		_default_gain = ConfigOption('_default_gain', 1.0)
48		_id_camera = ConfigOption('id_camera', 0) # if more than one camera is present
49
50		_dll = None
51		_camera_handle = None
52		_exposure = _default_exposure
53		_gain = _default_gain
54		_width = 0
55		_height = 0
56		_pos_x = 0
57		_pos_y = 0
58		_bit_depth = 0
59		_cam = None
60		_acquiring = False
61		_live = False
62		_last_acquisition_mode = None # useful if config changes during acq
63		_sensor_info = None
64
65		_image_memory = None
66		_image_pid = None
67
68		def on_activate(self):
69		""" Initialisation performed during activation of the module.
70		"""
71
72		# Load the dll if present
73		self._load_dll()
74		self._connect_camera()
75		self._init_camera()
76
77		def _check_error(self, code, message):
78		"""
79		Check that the code means OK and log message as error if not. Return True if OK, False otherwise.
80
81		"""
82		if code != IS_SUCCESS:
83		self.log.error(message)
84		return False
85		else:
86		return True
87
88		def _check_int_range(self, value, mini, maxi ,message):
89		"""
90		Check that value is in the range [mini, maxi] and log message as error if not. Return True if OK.
91
92		"""
93		if value < mini or value > maxi:
94		self.log.error('{} - Value {} must be between {} and {}'.format(message, value, mini, maxi))
95		return False
96		else:
97		return True
98
99		def _load_dll(self):
100		"""
101		Load the dll for the camera
102		"""
103		try:
104		if platform.system() == "Windows":
105		if platform.architecture()[0] == "64bit":
106		self._dll = ctypes.cdll.uc480_64
107		else:
108		self._dll = ctypes.cdll.uc480
109		# for Linux
110		elif platform.system() == "Linux":
111		self._dll = ctypes.cdll.LoadLibrary('libueye_api.so')
112		else:
113		self.log.error("Can not detect operating system to load Thorlabs DLL.")
114		except OSError:
115		self.log.error("Can not log Thorlabs DLL.")
116
117		def _connect_camera(self):
118		"""
119		Connect to the camera and get basic info on it
120		"""
121		number_of_cameras = ctypes.c_int(0)
122		self._dll.is_GetNumberOfCameras(byref(number_of_cameras))
123		if number_of_cameras.value < 1:
124		self.log.error("No Thorlabs camera detected.")
125		elif number_of_cameras.value - 1 < self._id_camera:
126		self.log.error("A Thorlabs camera has been detected but the id specified above the number of camera(s)")
127		else:
128		self._camera_handle = ctypes.c_int(0)
129		ret = self._dll.is_InitCamera(ctypes.pointer(self._camera_handle))
130		self._check_error(ret, "Could not initialize camera")
131		self._sensor_info = SENSORINFO()
132		self._dll.is_GetSensorInfo(self._camera_handle, byref(self._sensor_info))
133		self.log.debug('Connected to camera : {}'.format(str(self._sensor_info.strSensorName)))
134
135		def _init_camera(self):
136		"""
137		Set the parameters of the camera for our usage
138		"""
139		# Color mode
140		code = self._dll.is_SetColorMode(self._camera_handle, ctypes.c_int(IS_SET_CM_Y8))
141		self._check_error(code, "Could set color mode IS_SET_CM_Y8")
142		self._bit_depth = 8
143		# Image size
144		self.set_image_size(self._sensor_info.nMaxWidth, self._sensor_info.nMaxHeight)
145		# Image position
146		self.set_image_position(0, 0)
147		# Binning
148		code = self._dll.is_SetBinning(self._camera_handle, ctypes.c_int(0)) # Disable binning
149		self._check_error(code, "Could set binning disabled")
150		# Sub sampling
151		code = self._dll.is_SetSubSampling(self._camera_handle, ctypes.c_int(0)) # Disable sub sampling
152		self._check_error(code, "Could set sub sampling disabled")
153		# Allocate image memory
154		self._image_pid = ctypes.c_int()
155		self._image_memory = ctypes.c_char_p()
156		code = self._dll.is_AllocImageMem(
157		self._camera_handle, self._width, self._height,
158		self._bit_depth, byref(self._image_memory), byref(self._image_pid))
159		self._check_error(code, "Could not allocate image memory")
160		# Set image memory
161		code = self._dll.is_SetImageMem(self._camera_handle, self._image_memory, self._image_pid)
162		self._check_error(code, "Could not set image memory")
163		# Set auto exit
164		code = self._dll.is_EnableAutoExit(self._camera_handle, 1) # Enable auto-exit
165		self._check_error(code, "Could not set auto exit")
166
167		self.set_exposure(self._exposure)
168		self.set_gain(self._gain)
169
170	View Code Duplication	def set_image_size(self, width=None, height=None):
		0 ignored issues – show Duplication introduced 2018-05-15 12:49 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
171		"""
172		Set the size of the image, here the camera will acquire only part of the image from a given position
173		"""
174		if width is not None:
175		width = int(width)
176		self._check_int_range(width, 1, self._sensor_info.nMaxWidth, 'Can not set image width')
177		self._width = width
178		if height is not None:
179		height = int(height)
180		self._check_int_range(height, 1, self._sensor_info.nMaxHeight, 'Can not set image height')
181		self._height = height
182
183		code = self._dll.is_SetImageSize(self._camera_handle, ctypes.c_int(self._width), ctypes.c_int(self._height))
184		return self._check_error(code, "Could not set image size")
185
186	View Code Duplication	def set_image_position(self, pos_x, pos_y):
		0 ignored issues – show Duplication introduced 2018-05-15 12:49 UTC by Report Bug Copy Issue Report This code seems to be duplicated in your project. Loading history...
187		"""
188		Set image position reference coordinate
189		"""
190		if pos_x is not None:
191		pos_x = int(pos_x)
192		self._check_int_range(pos_x, 0, self._sensor_info.nMaxWidth-1, 'Can not set image position x')
193		self._pos_x = pos_x
194		if pos_y is not None:
195		pos_y = int(pos_y)
196		self._check_int_range(pos_y, 0, self._sensor_info.nMaxHeight-1, 'Can not set image position y')
197		self._pos_y = pos_y
198
199		code = self._dll.is_SetImagePos(self._camera_handle, ctypes.c_int(self._pos_x), ctypes.c_int(self._pos_y))
200		return self._check_error(code, "Could not set image position")
201
202
203		def on_deactivate(self):
204		"""
205		Deinitialisation performed during deactivation of the module.
206		"""
207		self._dll.is_ExitCamera(self._camera_handle)
208		self._acquiring = False
209		self._live = False
210
211		def get_name(self):
212		"""
213		Return a name for the camera
214		"""
215		return self._sensor_info.strSensorName
216
217		def get_size(self):
218		"""
219		Return the max size of the camera
220		"""
221		return self._width, self._height
222
223		def support_live_acquisition(self):
224		"""
225		Return whether or not this camera support live acquisition
226		"""
227		return True
228
229		def start_live_acquisition(self):
230		"""
231		Set the camera in live mode
232		"""
233		if self.get_ready_state():
234		self._acquiring = True
235		self._live = True
236		code = self._dll.is_CaptureVideo(self._camera_handle, c_int(IS_DONT_WAIT))
237		no_error = self._check_error(code, "Could not start live acquisition")
238		if not no_error:
239		self._acquiring = False
240		self._live = False
241		return False
242		return True
243		else:
244		return False
245
246		def start_single_acquisition(self):
247		"""
248		Start the acquisition of a single image
249		"""
250		if self.get_ready_state():
251		self._acquiring = True
252		code = self._dll.is_FreezeVideo(self._camera_handle, c_int(IS_WAIT))
253		self._acquiring = False
254		return self._check_error(code, "Could not start single acquisition")
255		else:
256		return False
257
258		def stop_acquisition(self):
259		"""
260		Stop live acquisition
261		"""
262		no_error = True
263		if self._acquiring:
264		code = self._dll.is_StopLiveVideo(self._camera_handle, c_int(IS_FORCE_VIDEO_STOP))
265		no_error = self._check_error(code, "Could not stop acquisition")
266		self._acquiring = False
267		self._live = False
268		return no_error
269
270		def get_acquired_data(self):
271		"""
272		Return last acquired data from the dll
273		"""
274		# Allocate memory for image:
275		img_size = self._width * self._height
276		c_array = ctypes.c_char * img_size
277		c_img = c_array()
278		# copy camera memory to accessible memory
279		code = self._dll.is_CopyImageMem(self._camera_handle, self._image_memory, self._image_pid, c_img)
280		self._check_error(code, "Could copy image to memory")
281		# Convert to numpy 2d array of float from 0 to 1
282		img_array = np.frombuffer(c_img, dtype=ctypes.c_ubyte)
283		img_array = img_array.astype(float)
284		img_array.shape = np.array((self._height, self._width))
285
286		return img_array
287
288		def get_bit_depth(self):
289		"""
290		Return the bit depth of the image
291		"""
292		return self._bit_depth
293
294		def set_exposure(self, time):
295		"""
296		Set the exposure in second
297		Return the new exposure
298		"""
299		exp = c_double(time * 1e3) # in ms
300		new_exp = c_double(0)
301		code = self._dll.is_SetExposureTime(self._camera_handle, exp, byref(new_exp))
302		self._check_error(code, "Could not set exposure")
303		self._exposure = float(new_exp.value)/1000 # in ms
304		return self._exposure
305
306		def get_exposure(self):
307		"""
308		Return current exposure
309		"""
310		return self._exposure
311
312		def get_ready_state(self):
313		"""
314		Return whether or not the camera is ready for an acquisition
315		"""
316		if self.module_state()!='idle':
317		return False
318		return not self._acquiring
319
320		def set_gain(self, gain):
321		"""
322		Set the gain
323		"""
324		pass
325
326		def get_gain(self):
327		"""
328		Get the gain
329		"""
330		return self._gain
331
332

Ulm-IQO / qudi

Pull Request — master (#380)

CameraThorlabs._connect_camera() A

Complexity

Size

Duplication

Importance

Duplication Side-by-Side

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