|
1
|
|
|
"""Estimator checker for extension.""" |
|
2
|
|
|
|
|
3
|
|
|
__author__ = ["fkiraly"] |
|
4
|
|
|
__all__ = ["check_estimator"] |
|
5
|
|
|
|
|
6
|
|
|
from skbase.utils.dependencies import _check_soft_dependencies |
|
7
|
|
|
|
|
8
|
|
|
|
|
9
|
|
|
def check_estimator( |
|
10
|
|
|
estimator, |
|
11
|
|
|
raise_exceptions=False, |
|
12
|
|
|
tests_to_run=None, |
|
13
|
|
|
fixtures_to_run=None, |
|
14
|
|
|
verbose=True, |
|
15
|
|
|
tests_to_exclude=None, |
|
16
|
|
|
fixtures_to_exclude=None, |
|
17
|
|
|
): |
|
18
|
|
|
"""Run all tests on one single estimator. |
|
19
|
|
|
|
|
20
|
|
|
Tests that are run on estimator: |
|
21
|
|
|
|
|
22
|
|
|
* all tests in test_all_estimators |
|
23
|
|
|
* all interface compatibility tests from the module of estimator's scitype |
|
24
|
|
|
|
|
25
|
|
|
Parameters |
|
26
|
|
|
---------- |
|
27
|
|
|
estimator : estimator class or estimator instance |
|
28
|
|
|
raise_exceptions : bool, optional, default=False |
|
29
|
|
|
whether to return exceptions/failures in the results dict, or raise them |
|
30
|
|
|
|
|
31
|
|
|
* if False: returns exceptions in returned `results` dict |
|
32
|
|
|
* if True: raises exceptions as they occur |
|
33
|
|
|
|
|
34
|
|
|
tests_to_run : str or list of str, optional. Default = run all tests. |
|
35
|
|
|
Names (test/function name string) of tests to run. |
|
36
|
|
|
sub-sets tests that are run to the tests given here. |
|
37
|
|
|
fixtures_to_run : str or list of str, optional. Default = run all tests. |
|
38
|
|
|
pytest test-fixture combination codes, which test-fixture combinations to run. |
|
39
|
|
|
sub-sets tests and fixtures to run to the list given here. |
|
40
|
|
|
If both tests_to_run and fixtures_to_run are provided, runs the *union*, |
|
41
|
|
|
i.e., all test-fixture combinations for tests in tests_to_run, |
|
42
|
|
|
plus all test-fixture combinations in fixtures_to_run. |
|
43
|
|
|
verbose : str, optional, default=True. |
|
44
|
|
|
whether to print out informative summary of tests run. |
|
45
|
|
|
tests_to_exclude : str or list of str, names of tests to exclude. default = None |
|
46
|
|
|
removes tests that should not be run, after subsetting via tests_to_run. |
|
47
|
|
|
fixtures_to_exclude : str or list of str, fixtures to exclude. default = None |
|
48
|
|
|
removes test-fixture combinations that should not be run. |
|
49
|
|
|
This is done after subsetting via fixtures_to_run. |
|
50
|
|
|
|
|
51
|
|
|
Returns |
|
52
|
|
|
------- |
|
53
|
|
|
results : dict of results of the tests in self |
|
54
|
|
|
keys are test/fixture strings, identical as in pytest, e.g., test[fixture] |
|
55
|
|
|
entries are the string "PASSED" if the test passed, |
|
56
|
|
|
or the exception raised if the test did not pass |
|
57
|
|
|
returned only if all tests pass, or raise_exceptions=False |
|
58
|
|
|
|
|
59
|
|
|
Raises |
|
60
|
|
|
------ |
|
61
|
|
|
if raise_exceptions=True, |
|
62
|
|
|
raises any exception produced by the tests directly |
|
63
|
|
|
|
|
64
|
|
|
Examples |
|
65
|
|
|
-------- |
|
66
|
|
|
>>> from hyperactive.opt import HillClimbing |
|
67
|
|
|
>>> from hyperactive.utils import check_estimator |
|
68
|
|
|
|
|
69
|
|
|
Running all tests for HillClimbing class, |
|
70
|
|
|
this uses all instances from get_test_params and compatible scenarios |
|
71
|
|
|
|
|
72
|
|
|
>>> results = check_estimator(HillClimbing) |
|
73
|
|
|
All tests PASSED! |
|
74
|
|
|
|
|
75
|
|
|
Running all tests for a specific HillClimbing |
|
76
|
|
|
this uses the instance that is passed and compatible scenarios |
|
77
|
|
|
|
|
78
|
|
|
>>> specific_hill_climbing = HillClimbing.create_test_instance() |
|
79
|
|
|
>>> results = check_estimator(specific_hill_climbing) |
|
80
|
|
|
All tests PASSED! |
|
81
|
|
|
|
|
82
|
|
|
Running specific test (all fixtures) HillClimbing |
|
83
|
|
|
|
|
84
|
|
|
>>> results = check_estimator(HillClimbing, tests_to_run="test_clone") |
|
85
|
|
|
All tests PASSED! |
|
86
|
|
|
|
|
87
|
|
|
{'test_clone[HillClimbing-0]': 'PASSED', |
|
88
|
|
|
'test_clone[HillClimbing-1]': 'PASSED'} |
|
89
|
|
|
|
|
90
|
|
|
Running one specific test-fixture-combination for ResidualDouble |
|
91
|
|
|
|
|
92
|
|
|
>>> check_estimator( |
|
93
|
|
|
... HillClimbing, fixtures_to_run="test_clone[HillClimbing-1]" |
|
94
|
|
|
... ) |
|
95
|
|
|
All tests PASSED! |
|
96
|
|
|
{'test_clone[HillClimbing-1]': 'PASSED'} |
|
97
|
|
|
""" |
|
98
|
|
|
msg = ( |
|
99
|
|
|
"check_estimator is a testing utility for developers, and " |
|
100
|
|
|
"requires pytest to be present " |
|
101
|
|
|
"in the python environment, but pytest was not found. " |
|
102
|
|
|
"pytest is a developer dependency and not included in the base " |
|
103
|
|
|
"sktime installation. Please run: `pip install pytest` to " |
|
104
|
|
|
"install the pytest package. " |
|
105
|
|
|
"To install sktime with all developer dependencies, run:" |
|
106
|
|
|
" `pip install hyperactive[dev]`" |
|
107
|
|
|
) |
|
108
|
|
|
_check_soft_dependencies("pytest", msg=msg) |
|
109
|
|
|
|
|
110
|
|
|
from hyperactive.tests.test_class_register import get_test_classes_for_obj |
|
111
|
|
|
|
|
112
|
|
|
test_clss_for_est = get_test_classes_for_obj(estimator) |
|
113
|
|
|
|
|
114
|
|
|
results = {} |
|
115
|
|
|
|
|
116
|
|
|
for test_cls in test_clss_for_est: |
|
117
|
|
|
test_cls_results = test_cls().run_tests( |
|
118
|
|
|
obj=estimator, |
|
119
|
|
|
raise_exceptions=raise_exceptions, |
|
120
|
|
|
tests_to_run=tests_to_run, |
|
121
|
|
|
fixtures_to_run=fixtures_to_run, |
|
122
|
|
|
tests_to_exclude=tests_to_exclude, |
|
123
|
|
|
fixtures_to_exclude=fixtures_to_exclude, |
|
124
|
|
|
) |
|
125
|
|
|
results.update(test_cls_results) |
|
126
|
|
|
|
|
127
|
|
|
failed_tests = [key for key in results.keys() if results[key] != "PASSED"] |
|
128
|
|
|
if len(failed_tests) > 0: |
|
129
|
|
|
msg = failed_tests |
|
130
|
|
|
msg = ["FAILED: " + x for x in msg] |
|
131
|
|
|
msg = "\n".join(msg) |
|
132
|
|
|
else: |
|
133
|
|
|
msg = "All tests PASSED!" |
|
134
|
|
|
|
|
135
|
|
|
if verbose: |
|
136
|
|
|
# printing is an intended feature, for console usage and interactive debugging |
|
137
|
|
|
print(msg) # noqa T001 |
|
138
|
|
|
|
|
139
|
|
|
return results |
|
140
|
|
|
|