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import bz2 |
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import copy |
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import csv |
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from itertools import zip_longest |
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from typing import Dict, List, Optional, Union |
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import chardet |
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from etlt.reader.Reader import Reader |
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from etlt.reader.UniversalCsvReaderFormatHelper import UniversalCsvReaderFormatHelper |
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class UniversalCsvReader(Reader): |
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""" |
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A universal CSV file reader. |
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- Open uncompressed and gz, bz2 compressed files. |
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- Auto encoding and field delimiter detection. |
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""" |
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sample_size = 64 * 1024 |
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line_endings = ['\r\n', '\n\r', '\n', '\r'] |
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delimiters = [',', ';', '\t', '|', ':'] |
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# ------------------------------------------------------------------------------------------------------------------ |
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def __init__(self, filenames: List[str], format_helper=None): |
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""" |
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Object constructor. |
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:param list(str) filenames: A list of CSV file names. |
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""" |
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Reader.__init__(self) |
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self._filenames: List[str] = filenames |
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""" |
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The name of the CSV files. |
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""" |
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self._file = None |
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""" |
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The current actual file object. |
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""" |
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self._csv_reader = None |
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""" |
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The current actual CSV file object. |
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:type: _csv.reader |
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""" |
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self._mapping: Optional[Dict[str, int]] = None |
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""" |
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The mapping from column names to column numbers. |
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""" |
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self._filename: Optional[str] = None |
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""" |
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The name of the current file. |
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""" |
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self._helper = UniversalCsvReaderFormatHelper() if not format_helper else format_helper |
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""" |
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The helper for detecting the appropriate formatting parameters for reading the current CSV file. |
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""" |
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self._formatting_parameters: Dict[str, str] = dict() |
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""" |
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The CSV formatting parameters for reading the current CSV file. |
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""" |
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self._sample: Optional[Union[str, bytes]] = None |
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""" |
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The sample when detecting automatically formatting parameters. |
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""" |
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# ------------------------------------------------------------------------------------------------------------------ |
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def __enter__(self): |
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# Nothing to do. |
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pass |
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# ------------------------------------------------------------------------------------------------------------------ |
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def __exit__(self, *_): |
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self._close() |
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# ------------------------------------------------------------------------------------------------------------------ |
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def get_source_name(self) -> Optional[str]: |
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""" |
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Returns the current source file. |
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""" |
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return self._filename |
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# ------------------------------------------------------------------------------------------------------------------ |
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def next(self): |
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""" |
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Yields the next row from the source files. |
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""" |
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for self._filename in self._filenames: |
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self._open() |
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for row in self._csv_reader: |
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self._row_number += 1 |
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if self._mapping: |
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yield {column_name: row[index] if 0 <= index < len(row) else '' for column_name, index in |
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self._mapping.items()} |
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elif self._fields: |
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yield dict(zip_longest(self._fields, row, fillvalue='')) |
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else: |
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yield row |
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self._close() |
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self._row_number = -1 |
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self._filename = None |
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return |
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# ------------------------------------------------------------------------------------------------------------------ |
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@property |
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def mapping(self) -> Optional[Dict[str, int]]: |
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""" |
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Getter for mapping. |
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""" |
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return copy.copy(self._mapping) |
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# ------------------------------------------------------------------------------------------------------------------ |
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@mapping.setter |
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def mapping(self, mapping: Optional[Dict[str, int]]): |
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""" |
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""" |
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self._mapping = mapping |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _open_file(self, mode: str, encoding: Optional[str] = None) -> None: |
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""" |
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Opens the next current file. |
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:param mode: The mode for opening the file. |
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:param encoding: The encoding of the file. |
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""" |
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if self._filename[-4:] == '.bz2': |
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self._file = bz2.open(self._filename, mode=mode, encoding=encoding) |
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else: |
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self._file = open(self._filename, mode=mode, encoding=encoding) |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _close(self) -> None: |
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""" |
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Closes the current file. |
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""" |
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if self._file: |
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self._file.close() |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _get_sample(self, mode: str, encoding: Optional[str]) -> None: |
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""" |
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Get a sample from the next current input file. |
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:param str mode: The mode for opening the file. |
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:param str|None encoding: The encoding of the file. None for open the file in binary mode. |
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""" |
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self._open_file(mode, encoding) |
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self._sample = self._file.read(UniversalCsvReader.sample_size) |
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self._file.close() |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _detect_encoding(self) -> None: |
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""" |
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Detects the encoding og the current file. |
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""" |
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self._formatting_parameters['encoding'] = chardet.detect(self._sample)['encoding'] |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _detect_delimiter(self) -> None: |
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""" |
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Detects the field delimiter in the sample data. |
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""" |
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candidate_value = ',' |
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candidate_count = 0 |
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for delimiter in UniversalCsvReader.delimiters: |
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count = self._sample.count(delimiter) |
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if count > candidate_count: |
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candidate_value = delimiter |
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candidate_count = count |
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self._formatting_parameters['delimiter'] = candidate_value |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _detect_line_ending(self) -> None: |
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""" |
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Detects the line ending in the sample data. |
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""" |
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candidate_value = '\n' |
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candidate_count = 0 |
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for line_ending in UniversalCsvReader.line_endings: |
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count = self._sample.count(line_ending) |
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if count > candidate_count: |
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candidate_value = line_ending |
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candidate_count = count |
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self._formatting_parameters['line_terminator'] = candidate_value |
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# ------------------------------------------------------------------------------------------------------------------ |
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def _open(self) -> None: |
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""" |
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Opens the next current file with proper settings for encoding and delimiter. |
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""" |
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self._sample = None |
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formatting_parameters0 = { |
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'encoding': 'auto', |
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'delimiter': 'auto', |
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'line_terminator': 'auto', |
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'escape_char': '\\', |
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'quote_char': '"'} |
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formatting_parameters1 = self._helper.pass1(self._filename, formatting_parameters0) |
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self._formatting_parameters = formatting_parameters1 |
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# Detect encoding. |
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if formatting_parameters1['encoding'] == 'auto': |
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self._get_sample('rb', None) |
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self._detect_encoding() |
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# Detect delimiter. |
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if formatting_parameters1['delimiter'] == 'auto': |
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self._get_sample('rt', formatting_parameters1['encoding']) |
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self._detect_delimiter() |
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# Detect line terminators. |
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if formatting_parameters1['line_terminator'] == 'auto': |
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if not self._sample: |
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self._get_sample('rt', formatting_parameters1['encoding']) |
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self._detect_line_ending() |
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self._formatting_parameters = self._helper.pass2(self._filename, |
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self._formatting_parameters, |
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formatting_parameters1) |
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self._open_file('rt', formatting_parameters1['encoding']) |
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self._csv_reader = csv.reader(self._file, |
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delimiter=self._formatting_parameters['delimiter'], |
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escapechar=self._formatting_parameters['escape_char'], |
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lineterminator=self._formatting_parameters['line_terminator'], |
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quotechar=self._formatting_parameters['quote_char']) # Ignored |
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self._sample = None |
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# ---------------------------------------------------------------------------------------------------------------------- |
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