| 
                    1
                 | 
                                    
                                                     | 
                
                 | 
                # encoding=utf8  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    2
                 | 
                                    
                                                     | 
                
                 | 
                from numpy import nan, asarray, zeros, float, full  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    3
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    4
                 | 
                                    
                                                     | 
                
                 | 
                from NiaPy.util.utility import objects2array  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    5
                 | 
                                    
                                                     | 
                
                 | 
                from NiaPy.algorithms.algorithm import Algorithm, Individual  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    6
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    7
                 | 
                                    
                                                     | 
                
                 | 
                class Fish(Individual):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    8
                 | 
                                    
                                                     | 
                
                 | 
                	r"""Fish individual class.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    9
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    10
                 | 
                                    
                                                     | 
                
                 | 
                	Attributes:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    11
                 | 
                                    
                                                     | 
                
                 | 
                		weight (float): Weight of fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    12
                 | 
                                    
                                                     | 
                
                 | 
                		delta_pos (float): TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    13
                 | 
                                    
                                                     | 
                
                 | 
                		delta_cost (float): TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    14
                 | 
                                    
                                                     | 
                
                 | 
                		has_improved (bool): If the fish has improved.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    15
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    16
                 | 
                                    
                                                     | 
                
                 | 
                	See Also:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    17
                 | 
                                    
                                                     | 
                
                 | 
                		* :class:`NiaPy.algorithms.algorithm.Individual`  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    18
                 | 
                                    
                                                     | 
                
                 | 
                	"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    19
                 | 
                                    
                                                     | 
                
                 | 
                	def __init__(self, weight, **kwargs):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    20
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Initialize fish individual.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    21
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    22
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    23
                 | 
                                    
                                                     | 
                
                 | 
                			weight (float): Weight of fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    24
                 | 
                                    
                                                     | 
                
                 | 
                			**kwargs (Dict[str, Any]): Additional arguments.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    25
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    26
                 | 
                                    
                                                     | 
                
                 | 
                		See Also:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    27
                 | 
                                    
                                                     | 
                
                 | 
                			* :func:`NiaPy.algorithms.algorithm.Individual`  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    28
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    29
                 | 
                                    
                                                     | 
                
                 | 
                		Individual.__init__(self, **kwargs)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    30
                 | 
                                    
                                                     | 
                
                 | 
                		self.weight = weight  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    31
                 | 
                                    
                                                     | 
                
                 | 
                		self.delta_pos = nan  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    32
                 | 
                                    
                                                     | 
                
                 | 
                		self.delta_cost = nan  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    33
                 | 
                                    
                                                     | 
                
                 | 
                		self.has_improved = False  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    34
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    35
                 | 
                                    
                                                     | 
                
                 | 
                class FishSchoolSearch(Algorithm):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    36
                 | 
                                    
                                                     | 
                
                 | 
                	r"""Implementation of Fish School Search algorithm.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    37
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    38
                 | 
                                    
                                                     | 
                
                 | 
                	Algorithm:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    39
                 | 
                                    
                                                     | 
                
                 | 
                		Fish School Search algorithm  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    40
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    41
                 | 
                                    
                                                     | 
                
                 | 
                	Date:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    42
                 | 
                                    
                                                     | 
                
                 | 
                		2019  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    43
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    44
                 | 
                                    
                                                     | 
                
                 | 
                	Authors:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    45
                 | 
                                    
                                                     | 
                
                 | 
                		Clodomir Santana Jr, Elliackin Figueredo, Mariana Maceds, Pedro Santos.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    46
                 | 
                                    
                                                     | 
                
                 | 
                		Ported to NiaPy with small changes by Kristian Järvenpää (2018).  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    47
                 | 
                                    
                                                     | 
                
                 | 
                		Ported to the NiaPy 2.0 by Klemen Berkovič (2019).  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    48
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    49
                 | 
                                    
                                                     | 
                
                 | 
                	License:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    50
                 | 
                                    
                                                     | 
                
                 | 
                		MIT  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    51
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    52
                 | 
                                    
                                                     | 
                
                 | 
                	Reference paper:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    53
                 | 
                                    
                                                     | 
                
                 | 
                		Bastos Filho, Lima Neto, Lins, D. O. Nascimento and P. Lima, “A novel search algorithm based on fish school behavior,” in 2008 IEEE International Conference on Systems, Man and Cybernetics, Oct 2008, pp. 2646–2651.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    54
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    55
                 | 
                                    
                                                     | 
                
                 | 
                	Attributes:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    56
                 | 
                                    
                                                     | 
                
                 | 
                		Name (List[str]): List of strings representing algorithm name.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    57
                 | 
                                    
                                                     | 
                
                 | 
                		SI_init (int): Length of initial individual step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    58
                 | 
                                    
                                                     | 
                
                 | 
                		SI_final (int): Length of final individual step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    59
                 | 
                                    
                                                     | 
                
                 | 
                		SV_init (int): Length of initial volatile step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    60
                 | 
                                    
                                                     | 
                
                 | 
                		SV_final (int): Length of final volatile step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    61
                 | 
                                    
                                                     | 
                
                 | 
                		min_w (float): Minimum weight of a fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    62
                 | 
                                    
                                                     | 
                
                 | 
                		w_scale (float): Maximum weight of a fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    63
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    64
                 | 
                                    
                                                     | 
                
                 | 
                	See Also:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    65
                 | 
                                    
                                                     | 
                
                 | 
                		* :class:`NiaPy.algorithms.algorithm.Algorithm`  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    66
                 | 
                                    
                                                     | 
                
                 | 
                	"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    67
                 | 
                                    
                                                     | 
                
                 | 
                	Name = ['FSS', 'FishSchoolSearch']  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    68
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    69
                 | 
                                    
                                                     | 
                
                 | 
                	@staticmethod  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    70
                 | 
                                    
                                                     | 
                
                 | 
                	def typeParameters():  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    71
                 | 
                                    
                                                     | 
                
                 | 
                		# TODO  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    72
                 | 
                                    
                                                     | 
                
                 | 
                		return {'school_size': lambda x: False, 'SI_final': lambda x: False} | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    73
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    74
                 | 
                                    
                                                     | 
                
                 | 
                	def setParameters(self, NP=25, SI_init=3, SI_final=10, SV_init=3, SV_final=13, min_w=0.3, w_scale=0.7, **ukwargs):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    75
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Set core arguments of FishSchoolSearch algorithm.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    76
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    77
                 | 
                                    
                                                     | 
                
                 | 
                		Arguments:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    78
                 | 
                                    
                                                     | 
                
                 | 
                			NP (Optional[int]): Number of fishes in school.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    79
                 | 
                                    
                                                     | 
                
                 | 
                			SI_init (Optional[int]): Length of initial individual step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    80
                 | 
                                    
                                                     | 
                
                 | 
                			SI_final (Optional[int]): Length of final individual step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    81
                 | 
                                    
                                                     | 
                
                 | 
                			SV_init (Optional[int]): Length of initial volatile step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    82
                 | 
                                    
                                                     | 
                
                 | 
                			SV_final (Optional[int]): Length of final volatile step.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    83
                 | 
                                    
                                                     | 
                
                 | 
                			min_w (Optional[float]): Minimum weight of a fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    84
                 | 
                                    
                                                     | 
                
                 | 
                			w_scale (Optional[float]): Maximum weight of a fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    85
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    86
                 | 
                                    
                                                     | 
                
                 | 
                		See Also:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    87
                 | 
                                    
                                                     | 
                
                 | 
                			* :func:`NiaPy.algorithms.Algorithm.setParameters`  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    88
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    89
                 | 
                                    
                                                     | 
                
                 | 
                		Algorithm.setParameters(self, NP=NP, **ukwargs)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    90
                 | 
                                    
                                                     | 
                
                 | 
                		self.step_individual_init = SI_init  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    91
                 | 
                                    
                                                     | 
                
                 | 
                		self.step_individual_final = SI_final  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    92
                 | 
                                    
                                                     | 
                
                 | 
                		self.step_volitive_init = SV_init  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    93
                 | 
                                    
                                                     | 
                
                 | 
                		self.step_volitive_final = SV_final  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    94
                 | 
                                    
                                                     | 
                
                 | 
                		self.min_w = min_w  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    95
                 | 
                                    
                                                     | 
                
                 | 
                		self.w_scale = w_scale  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    96
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    97
                 | 
                                    
                                                     | 
                
                 | 
                	def getParameters(self):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    98
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Get algorithm parameters.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    99
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    100
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    101
                 | 
                                    
                                                     | 
                
                 | 
                			Dict[str, Any]: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    102
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    103
                 | 
                                    
                                                     | 
                
                 | 
                		See Also:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    104
                 | 
                                    
                                                     | 
                
                 | 
                			* :func:`NiaPy.algorithms.Algorithm.setParameters`  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    105
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    106
                 | 
                                    
                                                     | 
                
                 | 
                		d = Algorithm.getParameters(self)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    107
                 | 
                                    
                                                     | 
                
                 | 
                		d.update({ | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    108
                 | 
                                    
                                                     | 
                
                 | 
                			'SI_init': self.step_individual_init,  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    109
                 | 
                                    
                                                     | 
                
                 | 
                			'SI_final': self.step_individual_final,  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    110
                 | 
                                    
                                                     | 
                
                 | 
                			'SV_init': self.step_volitive_init,  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    111
                 | 
                                    
                                                     | 
                
                 | 
                			'SV_final': self.step_volitive_final,  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    112
                 | 
                                    
                                                     | 
                
                 | 
                			'min_w': self.min_w,  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    113
                 | 
                                    
                                                     | 
                
                 | 
                			'w_scale': self.w_scale  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    114
                 | 
                                    
                                                     | 
                
                 | 
                		})  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    115
                 | 
                                    
                                                     | 
                
                 | 
                		return d  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    116
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    117
                 | 
                                    
                                                     | 
                
                 | 
                	def generate_uniform_coordinates(self, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    118
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Return Numpy array with uniform distribution.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    119
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    120
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    121
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    122
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    123
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    124
                 | 
                                    
                                                     | 
                
                 | 
                			numpy.ndarray: Array with uniform distribution.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    125
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    126
                 | 
                                    
                                                     | 
                
                 | 
                		return asarray([self.uniform(task.Lower, task.Upper, task.D) for _ in range(self.NP)])  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    127
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    128
                 | 
                                    
                                                     | 
                
                 | 
                	def gen_weight(self):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    129
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Get initial weight for fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    130
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    131
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    132
                 | 
                                    
                                                     | 
                
                 | 
                			float: Weight for fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    133
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    134
                 | 
                                    
                                                     | 
                
                 | 
                		return self.w_scale / 2.0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    135
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    136
                 | 
                                    
                                                     | 
                
                 | 
                	def init_fish(self, pos, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    137
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Create a new fish to a given position.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    138
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    139
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    140
                 | 
                                    
                                                     | 
                
                 | 
                			pos:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    141
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    142
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    143
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    144
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    145
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    146
                 | 
                                    
                                                     | 
                
                 | 
                		return Fish(x=pos, weight=self.gen_weight(), task=task, e=True)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    147
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    148
                 | 
                                    
                                                     | 
                
                 | 
                	def init_school(self, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    149
                 | 
                                    
                                                     | 
                
                 | 
                		"""Initialize fish school with uniform distribution."""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    150
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_individual = self.step_individual_init * (task.Upper - task.Lower)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    151
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_volitive = self.step_volitive_init * (task.Upper - task.Lower)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    152
                 | 
                                    
                                                     | 
                
                 | 
                		curr_weight_school = 0.0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    153
                 | 
                                    
                                                     | 
                
                 | 
                		prev_weight_school = 0.0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    154
                 | 
                                    
                                                     | 
                
                 | 
                		school = []  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    155
                 | 
                                    
                                                     | 
                
                 | 
                		positions = self.generate_uniform_coordinates(task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    156
                 | 
                                    
                                                     | 
                
                 | 
                		for idx in range(self.NP):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    157
                 | 
                                    
                                                     | 
                
                 | 
                			fish = self.init_fish(positions[idx], task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    158
                 | 
                                    
                                                     | 
                
                 | 
                			school.append(fish)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    159
                 | 
                                    
                                                     | 
                
                 | 
                			curr_weight_school += fish.weight  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    160
                 | 
                                    
                                                     | 
                
                 | 
                		prev_weight_school = curr_weight_school  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    161
                 | 
                                    
                                                     | 
                
                 | 
                		return curr_step_individual, curr_step_volitive, curr_weight_school, prev_weight_school, objects2array(school)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    162
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    163
                 | 
                                    
                                                     | 
                
                 | 
                	def max_delta_cost(self, school):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    164
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Find maximum delta cost - return 0 if none of the fishes moved.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    165
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                                                                
            
                                    
            
            
                | 
                    166
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    167
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray):  | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    168
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    169
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    170
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    171
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                        
                            
            
                                    
            
            
                | 
                    172
                 | 
                                    
                                                     | 
                
                 | 
                		max_ = 0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    173
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    174
                 | 
                                    
                                                     | 
                
                 | 
                			if max_ < fish.delta_cost: max_ = fish.delta_cost  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    175
                 | 
                                    
                                                     | 
                
                 | 
                		return max_  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    176
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    177
                 | 
                                    
                                                     | 
                
                 | 
                	def total_school_weight(self, school, prev_weight_school, curr_weight_school):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    178
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Calculate and update current weight of fish school.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    179
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    180
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    181
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    182
                 | 
                                    
                                                     | 
                
                 | 
                			prev_weight_school (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    183
                 | 
                                    
                                                     | 
                
                 | 
                			curr_weight_school (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    184
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    185
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    186
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray]: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    187
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    188
                 | 
                                    
                                                     | 
                
                 | 
                		prev_weight_school = curr_weight_school  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    189
                 | 
                                    
                                                     | 
                
                 | 
                		curr_weight_school = sum(fish.weight for fish in school)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    190
                 | 
                                    
                                                     | 
                
                 | 
                		return prev_weight_school, curr_weight_school  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    191
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    192
                 | 
                                    
                                                     | 
                
                 | 
                	def calculate_barycenter(self, school, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    193
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Calculate barycenter of fish school.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    194
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    195
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    196
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray): Current school fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    197
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    198
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    199
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    200
                 | 
                                    
                                                     | 
                
                 | 
                			numpy.ndarray: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    201
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    202
                 | 
                                    
                                                     | 
                
                 | 
                		barycenter = zeros((task.D,), dtype=float)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    203
                 | 
                                    
                                                     | 
                
                 | 
                		density = 0.0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    204
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    205
                 | 
                                    
                                                     | 
                
                 | 
                			density += fish.weight  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    206
                 | 
                                    
                                                     | 
                
                 | 
                			for dim in range(task.D): barycenter[dim] += (fish.x[dim] * fish.weight)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    207
                 | 
                                    
                                                     | 
                
                 | 
                		for dim in range(task.D): barycenter[dim] = barycenter[dim] / density  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    208
                 | 
                                    
                                                     | 
                
                 | 
                		return barycenter  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    209
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    210
                 | 
                                    
                                                     | 
                
                 | 
                	def update_steps(self, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    211
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Update step length for individual and volatile steps.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    212
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    213
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    214
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    215
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    216
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    217
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray]: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    218
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    219
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_individual = full(task.D, self.step_individual_init - task.Iters * float(self.step_individual_init - self.step_individual_final) / task.nGEN)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    220
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_volitive = full(task.D, self.step_volitive_init - task.Iters * float(self.step_volitive_init - self.step_volitive_final) / task.nGEN)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    221
                 | 
                                    
                                                     | 
                
                 | 
                		return curr_step_individual, curr_step_volitive  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    222
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    223
                 | 
                                    
                                                     | 
                
                 | 
                	def feeding(self, school):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    224
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Feed all fishes.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    225
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    226
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    227
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray): Current school fish population.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    228
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    229
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    230
                 | 
                                    
                                                     | 
                
                 | 
                			numpy.ndarray: New school fish population.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    231
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    232
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    233
                 | 
                                    
                                                     | 
                
                 | 
                			if self.max_delta_cost(school): fish.weight = fish.weight + (fish.delta_cost / self.max_delta_cost(school))  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    234
                 | 
                                    
                                                     | 
                
                 | 
                			if fish.weight > self.w_scale: fish.weight = self.w_scale  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    235
                 | 
                                    
                                                     | 
                
                 | 
                			elif fish.weight < self.min_w: fish.weight = self.min_w  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    236
                 | 
                                    
                                                     | 
                
                 | 
                		return school  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    237
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    238
                 | 
                                    
                                                     | 
                
                 | 
                	def individual_movement(self, school, curr_step_individual, xb, fxb, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    239
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Perform individual movement for each fish.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    240
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    241
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    242
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray): School fish population.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    243
                 | 
                                    
                                                     | 
                
                 | 
                			curr_step_individual (numpy.ndarray): TODO  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    244
                 | 
                                    
                                                     | 
                
                 | 
                			xb (numpy.ndarray): Global best solution.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    245
                 | 
                                    
                                                     | 
                
                 | 
                			fxb (float): Global best solutions fitness/objecive value.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    246
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    247
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    248
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    249
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray, float]:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    250
                 | 
                                    
                                                     | 
                
                 | 
                				1. New school of fishes.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    251
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    252
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    253
                 | 
                                    
                                                     | 
                
                 | 
                			new_pos = task.repair(fish.x + (curr_step_individual * self.uniform(-1, 1, task.D)), rnd=self.Rand)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    254
                 | 
                                    
                                                     | 
                
                 | 
                			cost = task.eval(new_pos)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    255
                 | 
                                    
                                                     | 
                
                 | 
                			if cost < fish.f:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    256
                 | 
                                    
                                                     | 
                
                 | 
                				xb, fxb = self.getBest(new_pos, cost, xb, fxb)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    257
                 | 
                                    
                                                     | 
                
                 | 
                				fish.delta_cost = abs(cost - fish.f)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    258
                 | 
                                    
                                                     | 
                
                 | 
                				fish.f = cost  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    259
                 | 
                                    
                                                     | 
                
                 | 
                				delta_pos = zeros((task.D,), dtype=float)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    260
                 | 
                                    
                                                     | 
                
                 | 
                				for idx in range(task.D): delta_pos[idx] = new_pos[idx] - fish.x[idx]  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    261
                 | 
                                    
                                                     | 
                
                 | 
                				fish.delta_pos = delta_pos  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    262
                 | 
                                    
                                                     | 
                
                 | 
                				fish.x = new_pos  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    263
                 | 
                                    
                                                     | 
                
                 | 
                			else:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    264
                 | 
                                    
                                                     | 
                
                 | 
                				fish.delta_pos = zeros((task.D,), dtype=float)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    265
                 | 
                                    
                                                     | 
                
                 | 
                				fish.delta_cost = 0  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    266
                 | 
                                    
                                                     | 
                
                 | 
                		return school, xb, fxb  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    267
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    268
                 | 
                                    
                                                     | 
                
                 | 
                	def collective_instinctive_movement(self, school, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    269
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Perform collective instinctive movement.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    270
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    271
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    272
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray): Current population.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    273
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optmization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    274
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    275
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    276
                 | 
                                    
                                                     | 
                
                 | 
                			numpy.ndarray: New populaiton  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    277
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    278
                 | 
                                    
                                                     | 
                
                 | 
                		cost_eval_enhanced = zeros((task.D,), dtype=float)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    279
                 | 
                                    
                                                     | 
                
                 | 
                		density = sum([f.delta_cost for f in school])  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    280
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school: cost_eval_enhanced += (fish.delta_pos * fish.delta_cost)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    281
                 | 
                                    
                                                     | 
                
                 | 
                		if density != 0: cost_eval_enhanced = cost_eval_enhanced / density  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    282
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school: fish.x = task.repair(fish.x + cost_eval_enhanced, rnd=self.Rand)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    283
                 | 
                                    
                                                     | 
                
                 | 
                		return school  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    284
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    285
                 | 
                                    
                                                     | 
                
                 | 
                	def collective_volitive_movement(self, school, curr_step_volitive, prev_weight_school, curr_weight_school, xb, fxb, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    286
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Perform collective volitive movement.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    287
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    288
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    289
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    290
                 | 
                                    
                                                     | 
                
                 | 
                			curr_step_volitive :  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    291
                 | 
                                    
                                                     | 
                
                 | 
                			prev_weight_school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    292
                 | 
                                    
                                                     | 
                
                 | 
                			curr_weight_school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    293
                 | 
                                    
                                                     | 
                
                 | 
                			xb (numpy.ndarray): Global best solution.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    294
                 | 
                                    
                                                     | 
                
                 | 
                			fxb (float): Global best solutions fitness/objective value.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    295
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    296
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    297
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    298
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray, float]: New population.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    299
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    300
                 | 
                                    
                                                     | 
                
                 | 
                		prev_weight_school, curr_weight_school = self.total_school_weight(school=school, prev_weight_school=prev_weight_school, curr_weight_school=curr_weight_school)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    301
                 | 
                                    
                                                     | 
                
                 | 
                		barycenter = self.calculate_barycenter(school, task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    302
                 | 
                                    
                                                     | 
                
                 | 
                		for fish in school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    303
                 | 
                                    
                                                     | 
                
                 | 
                			if curr_weight_school > prev_weight_school: fish.x -= (fish.x - barycenter) * curr_step_volitive * self.uniform(0, 1, task.D)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    304
                 | 
                                    
                                                     | 
                
                 | 
                			else: fish.x += (fish.x - barycenter) * curr_step_volitive * self.uniform(0, 1, task.D)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    305
                 | 
                                    
                                                     | 
                
                 | 
                			fish.evaluate(task, rnd=self.Rand)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    306
                 | 
                                    
                                                     | 
                
                 | 
                			xb, fxb = self.getBest(fish.x, fish.f, xb, fxb)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    307
                 | 
                                    
                                                     | 
                
                 | 
                		return school, xb, fxb  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    308
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    309
                 | 
                                    
                                                     | 
                
                 | 
                	def initPopulation(self, task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    310
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Initialize the school.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    311
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    312
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    313
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task): Optimization task.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    314
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    315
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    316
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray, dict]: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    317
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    318
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_individual, curr_step_volitive, curr_weight_school, prev_weight_school, school = self.init_school(task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    319
                 | 
                                    
                                                     | 
                
                 | 
                		return school, asarray([f.f for f in school]), {'curr_step_individual': curr_step_individual, 'curr_step_volitive': curr_step_volitive, 'curr_weight_school': curr_weight_school, 'prev_weight_school': prev_weight_school} | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    320
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    321
                 | 
                                    
                                                     | 
                
                 | 
                	def runIteration(self, task, school, fschool, xb, fxb, curr_step_individual, curr_step_volitive, curr_weight_school, prev_weight_school, **dparams):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    322
                 | 
                                    
                                                     | 
                
                 | 
                		r"""Core function of algorithm.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    323
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    324
                 | 
                                    
                                                     | 
                
                 | 
                		Args:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    325
                 | 
                                    
                                                     | 
                
                 | 
                			task (Task):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    326
                 | 
                                    
                                                     | 
                
                 | 
                			school (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    327
                 | 
                                    
                                                     | 
                
                 | 
                			fschool (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    328
                 | 
                                    
                                                     | 
                
                 | 
                			best_fish (numpy.ndarray):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    329
                 | 
                                    
                                                     | 
                
                 | 
                			fxb (float):  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    330
                 | 
                                    
                                                     | 
                
                 | 
                			curr_step_individual:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    331
                 | 
                                    
                                                     | 
                
                 | 
                			curr_step_volitive:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    332
                 | 
                                    
                                                     | 
                
                 | 
                			curr_weight_school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    333
                 | 
                                    
                                                     | 
                
                 | 
                			prev_weight_school:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    334
                 | 
                                    
                                                     | 
                
                 | 
                			**dparams:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    335
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    336
                 | 
                                    
                                                     | 
                
                 | 
                		Returns:  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    337
                 | 
                                    
                                                     | 
                
                 | 
                			Tuple[numpy.ndarray, numpy.ndarray, numpy.ndarray, float, dict]: TODO.  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    338
                 | 
                                    
                                                     | 
                
                 | 
                		"""  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    339
                 | 
                                    
                                                     | 
                
                 | 
                		school, xb, fxb = self.individual_movement(school, curr_step_individual, xb, fxb, task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    340
                 | 
                                    
                                                     | 
                
                 | 
                		school = self.feeding(school)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    341
                 | 
                                    
                                                     | 
                
                 | 
                		school = self.collective_instinctive_movement(school, task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    342
                 | 
                                    
                                                     | 
                
                 | 
                		school, xb, fxb = self.collective_volitive_movement(school=school, curr_step_volitive=curr_step_volitive, prev_weight_school=prev_weight_school, curr_weight_school=curr_weight_school, xb=xb, fxb=fxb, task=task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    343
                 | 
                                    
                                                     | 
                
                 | 
                		curr_step_individual, curr_step_volitive = self.update_steps(task)  | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    344
                 | 
                                    
                                                     | 
                
                 | 
                		return school, asarray([f.f for f in school]), xb, fxb, {'curr_step_individual': curr_step_individual, 'curr_step_volitive': curr_step_volitive, 'curr_weight_school': curr_weight_school, 'prev_weight_school': prev_weight_school} | 
            
            
                                                                                                            
                            
            
                                    
            
            
                | 
                    345
                 | 
                                    
                                                     | 
                
                 | 
                 | 
            
            
                                                                                                            
                                                                
            
                                    
            
            
                | 
                    346
                 | 
                                    
                                                     | 
                
                 | 
                # vim: tabstop=3 noexpandtab shiftwidth=3 softtabstop=3  | 
            
            
                                                        
            
                                    
            
            
                | 
                    347
                 | 
                                    
                                                     | 
                
                 | 
                 |