NatLibFi / Skosmos

model/sparql/GenericSparql.php

Doc Comments +4 added lines, -2 removed lines

@@ -453,7 +453,7 @@ 
      * Returns information (as a graph) for one or more concept URIs
      * @param mixed $uris concept URI (string) or array of URIs
      * @param string|null $arrayClass the URI for thesaurus array class, or null if not used
-     * @param \Vocabulary[]|null $vocabs vocabularies to target
+     * @param Vocabulary[] $vocabs vocabularies to target
      * @return \Concept[]
      */
     public function queryConceptInfoGraph($uris, $arrayClass = null, $vocabs = array()) {
@@ -673,7 +673,7 @@ 
 
     /**
      * Generate a VALUES clause for limiting the targeted graphs.
-     * @param Vocabulary[]|null $vocabs array of Vocabulary objects to target
+     * @param Vocabulary[] $vocabs array of Vocabulary objects to target
      * @return string VALUES clause, or "" if not necessary to limit
      */
     protected function formatValuesGraph($vocabs) {
@@ -853,6 +853,7 @@ 
      * @param string $searchLang language code used for matching labels (null means any language)
      * @param string[] $props properties to target e.g. array('skos:prefLabel','skos:altLabel')
      * @param boolean $unique restrict results to unique concepts (default: false)
+     * @param string $filterGraph
      * @return string sparql query
      */
     protected function generateConceptSearchQueryInner($term, $lang, $searchLang, $props, $unique, $filterGraph)
@@ -1118,6 +1119,7 @@ 
     /**
      * Generates sparql query clauses used for creating the alphabetical index.
      * @param string $letter the letter (or special class) to search for
+     * @param string $lang
      * @return array of sparql query clause strings
      */
     private function formatFilterConditions($letter, $lang) {

Braces +10 added lines, -6 removed lines

@@ -46,12 +46,16 @@ 
         $this->client = new EasyRdf\Sparql\Client($endpoint);
 
         // set graphClause so that it can be used by all queries
-        if ($this->isDefaultEndpoint()) // default endpoint; query any graph (and catch it in a variable)
+        if ($this->isDefaultEndpoint()) {
+          // default endpoint; query any graph (and catch it in a variable)
         {
             $this->graphClause = "GRAPH $graph";
-        } elseif ($graph) // query a specific graph
+        }
+        } elseif ($graph) {
+          // query a specific graph
         {
             $this->graphClause = "GRAPH <$graph>";
+        }
         } else // query the default graph
         {
             $this->graphClause = "";
@@ -100,8 +104,9 @@ 
             }
         }
         foreach ($graphs as $graph) {
-            if($graph !== NULL)
-                $clause .= "FROM NAMED <$graph> "; 
+            if($graph !== NULL) {
+                            $clause .= "FROM NAMED <$graph> ";
+            }
         }
         return $clause;
     }
@@ -1847,8 +1852,7 @@ 
         if (sizeof($ret) > 0) {
             // existing concept, with children
             return $ret;
-        }
-        else {
+        } else {
             // nonexistent concept
             return null;
         }

Indentation +6 added lines, -6 removed lines

@@ -64,7 +64,7 @@ 
      *
      * @param string $query
      * @return string
-    */
+     */
     protected function generateQueryPrefixes($query)
     {
         // Check for undefined prefixes
@@ -1809,7 +1809,7 @@ 
 
     /**
      * Generates a sparql query for finding the hierarchy for a concept.
-	 * A concept may be a top concept in multiple schemes, returned as a single whitespace-separated literal.
+     * A concept may be a top concept in multiple schemes, returned as a single whitespace-separated literal.
      * @param string $uri concept uri.
      * @param string $lang
      * @param string $fallback language to use if label is not available in the preferred language
@@ -1886,10 +1886,10 @@ 
                 $ret[$uri]['exact'] = $row->exact->getUri();
             }
             if (isset($row->tops)) {
-               $topConceptsList=explode(" ", $row->tops->getValue());
-               // sort to garantee an alphabetical ordering of the URI
-               sort($topConceptsList);
-               $ret[$uri]['tops'] = $topConceptsList;
+                $topConceptsList=explode(" ", $row->tops->getValue());
+                // sort to garantee an alphabetical ordering of the URI
+                sort($topConceptsList);
+                $ret[$uri]['tops'] = $topConceptsList;
             }
             if (isset($row->children)) {
                 if (!isset($ret[$uri]['narrower'])) {

Spacing +52 added lines, -52 removed lines

@@ -87,11 +87,11 @@ 
     protected function query($query) {
         $queryId = sprintf("%05d", rand(0, 99999));
         $logger = $this->model->getLogger();
-        $logger->info("[qid $queryId] SPARQL query:\n" . $this->generateQueryPrefixes($query) . "\n$query\n");
+        $logger->info("[qid $queryId] SPARQL query:\n".$this->generateQueryPrefixes($query)."\n$query\n");
         $starttime = microtime(true);
         $result = $this->client->query($query);
         $elapsed = intval(round((microtime(true) - $starttime) * 1000));
-        if(method_exists($result, 'numRows')) {
+        if (method_exists($result, 'numRows')) {
             $numRows = $result->numRows();
             $logger->info("[qid $queryId] result: $numRows rows returned in $elapsed ms");
         } else { // graph result
@@ -107,20 +107,20 @@ 
      * @param Vocabulary[]|null $vocabs
      * @return string
      */
-    protected function generateFromClause($vocabs=null) {
+    protected function generateFromClause($vocabs = null) {
         $graphs = array();
         $clause = '';
         if (!$vocabs) {
             return $this->graph !== '?graph' && $this->graph !== NULL ? "FROM <$this->graph>" : '';
         }
-        foreach($vocabs as $vocab) {
+        foreach ($vocabs as $vocab) {
             $graph = $vocab->getGraph();
             if (!in_array($graph, $graphs)) {
                 array_push($graphs, $graph);
             }
         }
         foreach ($graphs as $graph) {
-            if($graph !== NULL)
+            if ($graph !== NULL)
                 $clause .= "FROM NAMED <$graph> "; 
         }
         return $clause;
@@ -664,9 +664,9 @@ 
                 $conceptscheme['title'] = $row->title->getValue();
             }
             // add dct:subject and their labels in the result
-            if(isset($row->domain) && isset($row->domainLabel)){
-                $conceptscheme['subject']['uri']=$row->domain->getURI();
-                $conceptscheme['subject']['prefLabel']=$row->domainLabel->getValue();
+            if (isset($row->domain) && isset($row->domainLabel)) {
+                $conceptscheme['subject']['uri'] = $row->domain->getURI();
+                $conceptscheme['subject']['prefLabel'] = $row->domainLabel->getValue();
             }
 
             $ret[$row->cs->getURI()] = $conceptscheme;
@@ -729,7 +729,7 @@ 
         foreach ($graphs as $graph) {
           $values[] = "<$graph>";
         }
-        return "FILTER (?graph IN (" . implode(',', $values) . "))";
+        return "FILTER (?graph IN (".implode(',', $values)."))";
     }
 
     /**
@@ -739,16 +739,16 @@ 
      * @return string sparql query clauses
      */
     protected function formatLimitAndOffset($limit, $offset) {
-        $limit = ($limit) ? 'LIMIT ' . $limit : '';
-        $offset = ($offset) ? 'OFFSET ' . $offset : '';
+        $limit = ($limit) ? 'LIMIT '.$limit : '';
+        $offset = ($offset) ? 'OFFSET '.$offset : '';
         // eliminating whitespace and line changes when the conditions aren't needed.
         $limitandoffset = '';
         if ($limit && $offset) {
-            $limitandoffset = "\n" . $limit . "\n" . $offset;
+            $limitandoffset = "\n".$limit."\n".$offset;
         } elseif ($limit) {
-            $limitandoffset = "\n" . $limit;
+            $limitandoffset = "\n".$limit;
         } elseif ($offset) {
-            $limitandoffset = "\n" . $offset;
+            $limitandoffset = "\n".$offset;
         }
 
         return $limitandoffset;
@@ -900,14 +900,14 @@ 
         // if search language and UI/display language differ, must also consider case where there is no prefLabel in
         // the display language; in that case, should use the label with the same language as the matched label
         $labelcondFallback = ($searchLang != $lang) ?
-          "OPTIONAL { # in case previous OPTIONAL block gives no labels\n" .
+          "OPTIONAL { # in case previous OPTIONAL block gives no labels\n".
           "?s skos:prefLabel ?label . FILTER (LANGMATCHES(LANG(?label), LANG(?match))) }" : "";
           
         //  Including the labels if there is no query term given.
         if ($rawterm === '') {
           $labelClause = "?s skos:prefLabel ?label .";
-          $labelClause = ($lang) ? $labelClause . " FILTER (LANGMATCHES(LANG(?label), '$lang'))" : $labelClause . "";
-          return $labelClause . " BIND(?label AS ?match)";
+          $labelClause = ($lang) ? $labelClause." FILTER (LANGMATCHES(LANG(?label), '$lang'))" : $labelClause."";
+          return $labelClause." BIND(?label AS ?match)";
         }
 
         /*
@@ -971,20 +971,20 @@ 
         $schemecond = '';
         if (!empty($schemes)) {
             $conditions = array();
-            foreach($schemes as $scheme) {
+            foreach ($schemes as $scheme) {
                 $conditions[] = "{?s skos:inScheme <$scheme>}";
             }
-            $schemecond = '{'.implode(" UNION ",$conditions).'}';
+            $schemecond = '{'.implode(" UNION ", $conditions).'}';
         }
-        $filterDeprecated="";
+        $filterDeprecated = "";
         //show or hide deprecated concepts
-        if(!$showDeprecated){
-            $filterDeprecated="FILTER NOT EXISTS { ?s owl:deprecated true }";
+        if (!$showDeprecated) {
+            $filterDeprecated = "FILTER NOT EXISTS { ?s owl:deprecated true }";
         }
         // extra conditions for parent and group, if specified
-        $parentcond = ($params->getParentLimit()) ? "?s skos:broader+ <" . $params->getParentLimit() . "> ." : "";
-        $groupcond = ($params->getGroupLimit()) ? "<" . $params->getGroupLimit() . "> skos:member ?s ." : "";
-        $pgcond = $parentcond . $groupcond;
+        $parentcond = ($params->getParentLimit()) ? "?s skos:broader+ <".$params->getParentLimit()."> ." : "";
+        $groupcond = ($params->getGroupLimit()) ? "<".$params->getGroupLimit()."> skos:member ?s ." : "";
+        $pgcond = $parentcond.$groupcond;
 
         $orderextra = $this->isDefaultEndpoint() ? $this->graph : '';
 
@@ -1057,9 +1057,9 @@ 
             $hit['type'][] = $this->shortenUri($typeuri);
         }
 
-        if(!empty($fields)) {
+        if (!empty($fields)) {
             foreach ($fields as $prop) {
-                $propname = $prop . 's';
+                $propname = $prop.'s';
                 if (isset($row->$propname)) {
                     foreach (explode("\n", $row->$propname->getValue()) as $line) {
                         $rdata = str_getcsv($line, ',', '"', '"');
@@ -1074,7 +1074,7 @@ 
                             $propvals = $rdata[2];
                         }
 
-                        $hit['skos:' . $prop][] = $propvals;
+                        $hit['skos:'.$prop][] = $propvals;
                     }
                 }
             }
@@ -1150,7 +1150,7 @@ 
      * @return array query result object
      */
     public function queryConcepts($vocabs, $fields = null, $unique = false, $params, $showDeprecated = false) {
-        $query = $this->generateConceptSearchQuery($fields, $unique, $params,$showDeprecated);
+        $query = $this->generateConceptSearchQuery($fields, $unique, $params, $showDeprecated);
         $results = $this->query($query);
         return $this->transformConceptSearchResults($results, $vocabs, $fields);
     }
@@ -1204,9 +1204,9 @@ 
         $conditions = $this->formatFilterConditions($letter, $lang);
         $filtercondLabel = $conditions['filterpref'];
         $filtercondALabel = $conditions['filteralt'];
-        $filterDeprecated="";
-        if(!$showDeprecated){
-            $filterDeprecated="FILTER NOT EXISTS { ?s owl:deprecated true }";
+        $filterDeprecated = "";
+        if (!$showDeprecated) {
+            $filterDeprecated = "FILTER NOT EXISTS { ?s owl:deprecated true }";
         }
         $query = <<<EOQ
 SELECT DISTINCT ?s ?label ?alabel $fcl
@@ -1282,8 +1282,8 @@ 
      * @param array $classes
      * @param boolean $showDeprecated whether to include deprecated concepts in the result (default: false)
      */
-    public function queryConceptsAlphabetical($letter, $lang, $limit = null, $offset = null, $classes = null,$showDeprecated = false) {
-        $query = $this->generateAlphabeticalListQuery($letter, $lang, $limit, $offset, $classes,$showDeprecated);
+    public function queryConceptsAlphabetical($letter, $lang, $limit = null, $offset = null, $classes = null, $showDeprecated = false) {
+        $query = $this->generateAlphabeticalListQuery($letter, $lang, $limit, $offset, $classes, $showDeprecated);
         $results = $this->query($query);
         return $this->transformAlphabeticalListResults($results);
     }
@@ -1617,7 +1617,7 @@ 
                 if (!isset($row->label) || $row->label->getLang() === $lang) {
                     $ret[$row->object->getUri()] = $val;
                 } elseif ($row->label->getLang() === $fallbacklang) {
-                    $val['label'] .= ' (' . $row->label->getLang() . ')';
+                    $val['label'] .= ' ('.$row->label->getLang().')';
                     $ret[$row->object->getUri()] = $val;
                 }
             }
@@ -1713,10 +1713,10 @@ 
 
             $label = null;
             if (isset($row->label)) {
-                if ($row->label->getLang() == $lang || strpos($row->label->getLang(), $lang . "-") == 0) {
+                if ($row->label->getLang() == $lang || strpos($row->label->getLang(), $lang."-") == 0) {
                     $label = $row->label->getValue();
                 } else {
-                    $label = $row->label->getValue() . " (" . $row->label->getLang() . ")";
+                    $label = $row->label->getValue()." (".$row->label->getLang().")";
                 }
 
             }
@@ -1792,8 +1792,8 @@ 
         foreach ($result as $row) {
             if (isset($row->top) && isset($row->label)) {
                 $label = $row->label->getValue();
-                if ($row->label->getLang() && $row->label->getLang() !== $lang && strpos($row->label->getLang(), $lang . "-") !== 0) {
-                    $label .= ' (' . $row->label->getLang() . ')';
+                if ($row->label->getLang() && $row->label->getLang() !== $lang && strpos($row->label->getLang(), $lang."-") !== 0) {
+                    $label .= ' ('.$row->label->getLang().')';
                 }
                 $top = array('uri' => $row->top->getUri(), 'topConceptOf' => $row->topuri->getUri(), 'label' => $label, 'hasChildren' => filter_var($row->children->getValue(), FILTER_VALIDATE_BOOLEAN));
                 if (isset($row->notation)) {
@@ -1886,7 +1886,7 @@ 
                 $ret[$uri]['exact'] = $row->exact->getUri();
             }
             if (isset($row->tops)) {
-               $topConceptsList=explode(" ", $row->tops->getValue());
+               $topConceptsList = explode(" ", $row->tops->getValue());
                // sort to garantee an alphabetical ordering of the URI
                sort($topConceptsList);
                $ret[$uri]['tops'] = $topConceptsList;
@@ -1899,8 +1899,8 @@ 
                 $label = null;
                 if (isset($row->childlabel)) {
                     $label = $row->childlabel->getValue();
-                    if ($row->childlabel->getLang() !== $lang && strpos($row->childlabel->getLang(), $lang . "-") !== 0) {
-                        $label .= " (" . $row->childlabel->getLang() . ")";
+                    if ($row->childlabel->getLang() !== $lang && strpos($row->childlabel->getLang(), $lang."-") !== 0) {
+                        $label .= " (".$row->childlabel->getLang().")";
                     }
 
                 }
@@ -1921,8 +1921,8 @@ 
             }
             if (isset($row->label)) {
                 $preflabel = $row->label->getValue();
-                if ($row->label->getLang() && $row->label->getLang() !== $lang && strpos($row->label->getLang(), $lang . "-") !== 0) {
-                    $preflabel .= ' (' . $row->label->getLang() . ')';
+                if ($row->label->getLang() && $row->label->getLang() !== $lang && strpos($row->label->getLang(), $lang."-") !== 0) {
+                    $preflabel .= ' ('.$row->label->getLang().')';
                 }
 
                 $ret[$uri]['prefLabel'] = $preflabel;
@@ -2043,9 +2043,9 @@ 
      */
     private function generateConceptGroupContentsQuery($groupClass, $group, $lang, $showDeprecated = false) {
         $fcl = $this->generateFromClause();
-        $filterDeprecated="";
-        if(!$showDeprecated){
-            $filterDeprecated="  FILTER NOT EXISTS { ?conc owl:deprecated true }";
+        $filterDeprecated = "";
+        if (!$showDeprecated) {
+            $filterDeprecated = "  FILTER NOT EXISTS { ?conc owl:deprecated true }";
         }
         $query = <<<EOQ
 SELECT ?conc ?super ?label ?members ?type ?notation $fcl
@@ -2084,10 +2084,10 @@ 
                     'type' => array($row->type->shorten()),
                 );
                 if (isset($row->label)) {
-                    if ($row->label->getLang() == $lang || strpos($row->label->getLang(), $lang . "-") == 0) {
+                    if ($row->label->getLang() == $lang || strpos($row->label->getLang(), $lang."-") == 0) {
                         $values[$row->conc->getURI()]['prefLabel'] = $row->label->getValue();
                     } else {
-                        $values[$row->conc->getURI()]['prefLabel'] = $row->label->getValue() . " (" . $row->label->getLang() . ")";
+                        $values[$row->conc->getURI()]['prefLabel'] = $row->label->getValue()." (".$row->label->getLang().")";
                     }
 
                 }
@@ -2115,8 +2115,8 @@ 
      * @param boolean $showDeprecated whether to include deprecated concepts in search results
      * @return array Result array with concept URI as key and concept label as value
      */
-    public function listConceptGroupContents($groupClass, $group, $lang,$showDeprecated = false) {
-        $query = $this->generateConceptGroupContentsQuery($groupClass, $group, $lang,$showDeprecated);
+    public function listConceptGroupContents($groupClass, $group, $lang, $showDeprecated = false) {
+        $query = $this->generateConceptGroupContentsQuery($groupClass, $group, $lang, $showDeprecated);
         $result = $this->query($query);
         return $this->transformConceptGroupContentsResults($result, $lang);
     }
@@ -2129,7 +2129,7 @@ 
      */
     private function generateChangeListQuery($lang, $offset, $prop) {
         $fcl = $this->generateFromClause();
-        $offset = ($offset) ? 'OFFSET ' . $offset : '';
+        $offset = ($offset) ? 'OFFSET '.$offset : '';
 
         $query = <<<EOQ
 SELECT DISTINCT ?concept ?date ?label $fcl

model/DataObject.php

Braces +3 added lines, -1 removed lines

@@ -79,10 +79,12 @@
         if ($sortable !== null) {
             uksort($sortable, array($this, 'mycompare'));
             foreach ($sortable as $prop => $vals) {
-                if (is_array($prop)) // the ConceptProperty objects have their own sorting methods
+                if (is_array($prop)) {
+                  // the ConceptProperty objects have their own sorting methods
                 {
                     ksort($sortable[$prop]);
                 }
+                }
             }
         }
         return $sortable;

Indentation +2 added lines, -2 removed lines

@@ -124,8 +124,8 @@
      */
     public function getEnvLang()
     {
-       // get language from locale, same as used by gettext, set by Controller
-       return substr(getenv("LC_ALL"), 0, 2); // @codeCoverageIgnore
+        // get language from locale, same as used by gettext, set by Controller
+        return substr(getenv("LC_ALL"), 0, 2); // @codeCoverageIgnore
     }
 
     /**

model/Concept.php

Doc Comments +2 added lines

@@ -50,6 +50,7 @@ 
      * @param Vocabulary $vocab
      * @param EasyRdf\Resource $resource
      * @param EasyRdf\Graph $graph
+     * @param string|null $clang
      */
     public function __construct($model, $vocab, $resource, $graph, $clang)
     {
@@ -526,6 +527,7 @@ 
 
     /**
      * Gets the groups/arrays the concept belongs to.
+     * @param boolean $includeArrays
      */
     public function getReverseResources($includeArrays) {
         $groups = array();

Braces +2 added lines, -4 removed lines

@@ -312,8 +312,7 @@ 
             foreach ($res->propertyUris() as $prop) {
                 $this->addPropertyValues($res, $prop, $seen);
             }
-        }
-        else {
+        } else {
             foreach ($props as $prop) {
                 if ($res->hasProperty($prop)) {
                     $this->addPropertyValues($res, $prop, $seen);
@@ -850,8 +849,7 @@ 
         if (!in_array($vocabUriSpace, $context, true)) {
             if (!isset($context[$vocabPrefix])) {
                 $context[$vocabPrefix] = $vocabUriSpace;
-            }
-            else if ($context[$vocabPrefix] !== $vocabUriSpace) {
+            } else if ($context[$vocabPrefix] !== $vocabUriSpace) {
                 $i = 2;
                 while (isset($context[$vocabPrefix . $i]) && $context[$vocabPrefix . $i] !== $vocabUriSpace) {
                     $i += 1;

Indentation +6 added lines, -6 removed lines

@@ -517,13 +517,13 @@
                     
                     $defaultPropLabel = $this->model->getDefaultSparql()->queryLabel($longUri, '');
 
-					if($envLangLabels) {
-						$proplabel = $envLangLabels[$this->getEnvLang()];
+          if($envLangLabels) {
+            $proplabel = $envLangLabels[$this->getEnvLang()];
                     } else {
-						if($defaultPropLabel) {
-							$proplabel = $defaultPropLabel[''];
-						}
-					}
+            if($defaultPropLabel) {
+              $proplabel = $defaultPropLabel[''];
+            }
+          }
                 }
 
                 // look for superproperties in the current graph

Spacing +24 added lines, -24 removed lines

@@ -137,9 +137,9 @@ 
                 return $this->resource->label($fallback);
             }
             // We need to check all the labels in case one of them matches a subtag of the current language
-            foreach($this->resource->allLiterals('skos:prefLabel') as $label) {
+            foreach ($this->resource->allLiterals('skos:prefLabel') as $label) {
                 // the label lang code is a subtag of the UI lang eg. en-GB - create a new literal with the main language
-                if ($label !== null && strpos($label->getLang(), $fallback . '-') === 0) {
+                if ($label !== null && strpos($label->getLang(), $fallback.'-') === 0) {
                     return EasyRdf\Literal::create($label, $fallback);
                 }
             }
@@ -160,7 +160,7 @@ 
 
     public function hasXlLabel($prop = 'prefLabel')
     {
-        if ($this->resource->hasProperty('skosxl:' . $prop)) {
+        if ($this->resource->hasProperty('skosxl:'.$prop)) {
             return true;
         }
         return false;
@@ -169,7 +169,7 @@ 
     public function getXlLabel()
     {
         $labels = $this->resource->allResources('skosxl:prefLabel');
-        foreach($labels as $labres) {
+        foreach ($labels as $labres) {
             $label = $labres->getLiteral('skosxl:literalForm');
             if ($label !== null && $label->getLang() == $this->clang) {
                 return new LabelSkosXL($this->model, $labres);
@@ -276,7 +276,7 @@ 
         // catch external subjects that have $res as object
         $extSubjects = $exGraph->resourcesMatching("schema:about", $res);
 
-        $propList =  array_unique(array_merge(
+        $propList = array_unique(array_merge(
             $this->DEFAULT_EXT_PROPERTIES,
             $this->getVocab()->getConfig()->getExtProperties(),
             $this->getVocab()->getConfig()->getPlugins()->getExtProperties()
@@ -301,7 +301,7 @@ 
      * @param string[] $seen Processed resources so far
      * @param string[] $props (optional) limit to these property URIs
      */
-    private function addExternalTriplesToGraph($res, &$seen, $props=null)
+    private function addExternalTriplesToGraph($res, &$seen, $props = null)
     {
         if (array_key_exists($res->getUri(), $seen) && $seen[$res->getUri()] === 0) {
             return;
@@ -331,7 +331,7 @@ 
      */
     private function addPropertyValues($res, $prop, &$seen)
     {
-        $resList = $res->allResources('<' . $prop . '>');
+        $resList = $res->allResources('<'.$prop.'>');
 
         foreach ($resList as $res2) {
             if ($res2->isBNode()) {
@@ -341,7 +341,7 @@ 
             $this->addResourceReifications($res, $prop, $res2, $seen);
         }
 
-        $litList = $res->allLiterals('<' . $prop . '>');
+        $litList = $res->allLiterals('<'.$prop.'>');
 
         foreach ($litList as $lit) {
             $this->graph->addLiteral($res, $prop, $lit);
@@ -512,15 +512,15 @@ 
                 // if not found in current vocabulary, look up in the default graph to be able
                 // to read an ontology loaded in a separate graph
                 // note that this imply that the property has an rdf:type declared for the query to work
-                if(!$proplabel) {
+                if (!$proplabel) {
                     $envLangLabels = $this->model->getDefaultSparql()->queryLabel($longUri, $this->getEnvLang());
                     
                     $defaultPropLabel = $this->model->getDefaultSparql()->queryLabel($longUri, '');
 
-					if($envLangLabels) {
+					if ($envLangLabels) {
 						$proplabel = $envLangLabels[$this->getEnvLang()];
                     } else {
-						if($defaultPropLabel) {
+						if ($defaultPropLabel) {
 							$proplabel = $defaultPropLabel[''];
 						}
 					}
@@ -533,12 +533,12 @@ 
                 }
 
                 // also look up superprops in the default graph if not found in current vocabulary
-                if(!$superprops || empty($superprops)) {
+                if (!$superprops || empty($superprops)) {
                     $superprops = $this->model->getDefaultSparql()->querySuperProperties($longUri);
                 }
 
                 // we're reading only one super property, even if there are multiple ones
-                $superprop = ($superprops)?$superprops[0]:null;
+                $superprop = ($superprops) ? $superprops[0] : null;
                 if ($superprop) {
                     $superprop = EasyRdf\RdfNamespace::shorten($superprop) ? EasyRdf\RdfNamespace::shorten($superprop) : $superprop;
                 }
@@ -551,7 +551,7 @@ 
                 }
 
                 // searching for subproperties of literals too
-                if($superprops) {
+                if ($superprops) {
                     foreach ($superprops as $subi) {
                         $suburi = EasyRdf\RdfNamespace::shorten($subi) ? EasyRdf\RdfNamespace::shorten($subi) : $subi;
                         $duplicates[$suburi] = $prop;
@@ -671,14 +671,14 @@ 
 
             // making a human readable string from the timestamps
             if ($created != '') {
-                $ret = gettext('skosmos:created') . ' ' . (Punic\Calendar::formatDate($created, 'short'));
+                $ret = gettext('skosmos:created').' '.(Punic\Calendar::formatDate($created, 'short'));
             }
 
             if ($modified != '') {
                 if ($created != '') {
-                    $ret .= ', ' . gettext('skosmos:modified') . ' ' . (Punic\Calendar::formatDate($modified, 'short'));
+                    $ret .= ', '.gettext('skosmos:modified').' '.(Punic\Calendar::formatDate($modified, 'short'));
                 } else {
-                    $ret .= ' ' . ucfirst(gettext('skosmos:modified')) . ' ' . (Punic\Calendar::formatDate($modified, 'short'));
+                    $ret .= ' '.ucfirst(gettext('skosmos:modified')).' '.(Punic\Calendar::formatDate($modified, 'short'));
                 }
 
             }
@@ -686,12 +686,12 @@ 
             trigger_error($e->getMessage(), E_USER_WARNING);
             $ret = '';
             if ($this->resource->get('dc:modified')) {
-                $modified = (string) $this->resource->get('dc:modified');
-                $ret = gettext('skosmos:modified') . ' ' . $modified;
+                $modified = (string)$this->resource->get('dc:modified');
+                $ret = gettext('skosmos:modified').' '.$modified;
             }
             if ($this->resource->get('dc:created')) {
-                $created .= (string) $this->resource->get('dc:created');
-                $ret .= ' ' . gettext('skosmos:created') . ' ' . $created;
+                $created .= (string)$this->resource->get('dc:created');
+                $ret .= ' '.gettext('skosmos:created').' '.$created;
             }
         }
         return $ret;
@@ -804,7 +804,7 @@ 
         $ret = array();
         foreach ($labels as $lit) {
             // filtering away subsets of the current language eg. en vs en-GB
-            if ($lit->getLang() != $this->clang && strpos($lit->getLang(), $this->getEnvLang() . '-') !== 0) {
+            if ($lit->getLang() != $this->clang && strpos($lit->getLang(), $this->getEnvLang().'-') !== 0) {
                 $prop = in_array($lit, $prefLabels) ? 'skos:prefLabel' : 'skos:altLabel';
                 $ret[$this->literalLanguageToString($lit)][] = new ConceptPropertyValueLiteral($this->model, $this->vocab, $this->resource, $lit, $prop);
             }
@@ -866,10 +866,10 @@ 
             }
             else if ($context[$vocabPrefix] !== $vocabUriSpace) {
                 $i = 2;
-                while (isset($context[$vocabPrefix . $i]) && $context[$vocabPrefix . $i] !== $vocabUriSpace) {
+                while (isset($context[$vocabPrefix.$i]) && $context[$vocabPrefix.$i] !== $vocabUriSpace) {
                     $i += 1;
                 }
-                $context[$vocabPrefix . $i] = $vocabUriSpace;
+                $context[$vocabPrefix.$i] = $vocabUriSpace;
             }
         }
         $compactJsonLD = \ML\JsonLD\JsonLD::compact($this->graph->serialise('jsonld'), json_encode($context));

model/sparql/JenaTextSparql.php

Spacing +7 added lines, -7 removed lines

@@ -40,7 +40,7 @@ 
         // 1. Ensure characters with special meaning in Lucene are escaped
         $lucenemap = array();
         foreach (str_split(self::LUCENE_ESCAPE_CHARS) as $char) {
-            $lucenemap[$char] = '\\' . $char; // escape with a backslash
+            $lucenemap[$char] = '\\'.$char; // escape with a backslash
         }
         $term = strtr($term, $lucenemap);
 
@@ -82,7 +82,7 @@ 
      * @return string sparql order by clause
      */
     private function formatOrderBy($expression, $lang) {
-        if(!$this->model->getConfig()->getCollationEnabled()) {
+        if (!$this->model->getConfig()->getCollationEnabled()) {
             return $expression;
         }
         $orderby = sprintf('arq:collation(\'%2$s\', %1$s)', $expression, $lang);
@@ -114,13 +114,13 @@ 
 
         # make text query clause
         $lcletter = mb_strtolower($letter, 'UTF-8'); // convert to lower case, UTF-8 safe
-        $textcondPref = $this->createTextQueryCondition($letter . '*', 'skos:prefLabel', $lang);
-        $textcondAlt = $this->createTextQueryCondition($letter . '*', 'skos:altLabel', $lang);
+        $textcondPref = $this->createTextQueryCondition($letter.'*', 'skos:prefLabel', $lang);
+        $textcondAlt = $this->createTextQueryCondition($letter.'*', 'skos:altLabel', $lang);
         $orderbyclause = $this->formatOrderBy("LCASE(?match)", $lang);
 
-        $filterDeprecated="";
-        if(!$showDeprecated){
-            $filterDeprecated="FILTER NOT EXISTS { ?s owl:deprecated true }";
+        $filterDeprecated = "";
+        if (!$showDeprecated) {
+            $filterDeprecated = "FILTER NOT EXISTS { ?s owl:deprecated true }";
         }
         
         $query = <<<EOQ

model/LabelSkosXL.php

Doc Comments +3 added lines

@@ -3,6 +3,9 @@
 class LabelSkosXL extends DataObject
 {
 
+    /**
+     * @param Model $model
+     */
     public function __construct($model, $resource)
     {
         parent::__construct($model, $resource);

Spacing +2 added lines, -2 removed lines

@@ -11,7 +11,7 @@ 
     public function getPrefLabel() {
         $label = null;
         $labels = $this->resource->allResources('skosxl:prefLabel');
-        foreach($labels as $labres) {
+        foreach ($labels as $labres) {
             $label = $labres->getLiteral('skosxl:literalForm');
             if ($label->getLang() == $this->clang) {
                 return $label;
@@ -23,7 +23,7 @@ 
     public function getProperties() {
         $ret = array();
         $props = $this->resource->properties();
-        foreach($props as $prop) {
+        foreach ($props as $prop) {
             if ($prop !== 'skosxl:prefLabel') {
                 $ret[$prop] = $this->resource->get($prop);
             }

model/ConceptPropertyValueLiteral.php

Spacing +2 added lines, -2 removed lines

@@ -49,7 +49,7 @@ 
                 return Punic\Calendar::formatDate($val, 'short');
             } catch (Exception $e) {
                 trigger_error($e->getMessage(), E_USER_WARNING);
-                return (string) $this->literal;
+                return (string)$this->literal;
             }
         }
         return $this->literal->getValue();
@@ -80,7 +80,7 @@ 
         $resources = $graph->resourcesMatching('skosxl:literalForm', $this->literal);
         foreach ($resources as $xlres) {
             foreach ($xlres->properties() as $prop) {
-                foreach($graph->allLiterals($xlres, $prop) as $val) {
+                foreach ($graph->allLiterals($xlres, $prop) as $val) {
                     if ($prop !== 'rdf:type') {
                         $ret[$prop] = $val;
                     }

Doc Comments +5 added lines

@@ -10,6 +10,11 @@
     /** property type */
     private $type;
 
+    /**
+     * @param Model $model
+     * @param Vocabulary $vocab
+     * @param EasyRdf\Resource $resource
+     */
     public function __construct($model, $vocab, $resource, $literal, $prop)
     {
         parent::__construct($model, $vocab, $resource);

model/ConceptSearchParameters.php

Spacing +1 added lines, -1 removed lines

@@ -75,7 +75,7 @@
         if ($this->rest) {
             return $term;
         }
-        return strpos($term, "*") === false ? $term . "*" : $term; // default to prefix search
+        return strpos($term, "*") === false ? $term."*" : $term; // default to prefix search
     }
 
     public function getContentLang()

Braces +3 added lines, -2 removed lines

@@ -69,8 +69,9 @@
     public function getSearchTerm()
     {
         $term = $this->request->getQueryParamRaw('q') ? $this->request->getQueryParamRaw('q') : $this->request->getQueryParamRaw('query');
-        if (!$term && $this->rest)
-            $term = $this->request->getQueryParamRaw('label');
+        if (!$term && $this->rest) {
+                    $term = $this->request->getQueryParamRaw('label');
+        }
         $term = trim($term); // surrounding whitespace is not considered significant
         if ($this->rest) {
             return $term;

controller/RestController.php

Braces +18 added lines, -6 removed lines

@@ -400,7 +400,9 @@ 
                 $hits[] = $res;
             }
         }
-        if (sizeof($hits) > 0) return $hits;
+        if (sizeof($hits) > 0) {
+          return $hits;
+        }
 
         // case 2: case-insensitive match on preferred label
         foreach ($results as $res) {
@@ -408,7 +410,9 @@ 
                 $hits[] = $res;
             }
         }
-        if (sizeof($hits) > 0) return $hits;
+        if (sizeof($hits) > 0) {
+          return $hits;
+        }
 
         if ($lang === null) {
             // case 1A: exact match on preferred label in any language
@@ -419,7 +423,9 @@ 
                     $hits[] = $res;
                 }
             }
-            if (sizeof($hits) > 0) return $hits;
+            if (sizeof($hits) > 0) {
+              return $hits;
+            }
 
             // case 2A: case-insensitive match on preferred label in any language
             foreach ($results as $res) {
@@ -429,7 +435,9 @@ 
                     $hits[] = $res;
                 }
             }
-            if (sizeof($hits) > 0) return $hits;
+            if (sizeof($hits) > 0) {
+              return $hits;
+            }
         }
 
         // case 3: exact match on alternate label
@@ -438,7 +446,9 @@ 
                 $hits[] = $res;
             }
         }
-        if (sizeof($hits) > 0) return $hits;
+        if (sizeof($hits) > 0) {
+          return $hits;
+        }
 
 
         // case 4: case-insensitive match on alternate label
@@ -447,7 +457,9 @@ 
                 $hits[] = $res;
             }
         }
-        if (sizeof($hits) > 0) return $hits;
+        if (sizeof($hits) > 0) {
+          return $hits;
+        }
 
         return $hits;
     }

Spacing +15 added lines, -15 removed lines

@@ -25,7 +25,7 @@ 
         // wrap with JSONP callback if requested
         if (filter_input(INPUT_GET, 'callback', FILTER_SANITIZE_STRING)) {
             header("Content-type: application/javascript; charset=utf-8");
-            echo filter_input(INPUT_GET, 'callback', FILTER_UNSAFE_RAW) . "(" . json_encode($data) . ");";
+            echo filter_input(INPUT_GET, 'callback', FILTER_UNSAFE_RAW)."(".json_encode($data).");";
             return;
         }
 
@@ -88,7 +88,7 @@ 
                 'vocabularies' => 'onki:hasVocabulary',
                 'id' => 'onki:vocabularyIdentifier',
                 'uri' => '@id',
-                '@base' => $this->getBaseHref() . "rest/v1/vocabularies",
+                '@base' => $this->getBaseHref()."rest/v1/vocabularies",
             ),
             'uri' => '',
             'vocabularies' => $results,
@@ -105,7 +105,7 @@ 
         // convert to vocids array to support multi-vocabulary search
         $vocids = ($vocabs !== null && $vocabs !== '') ? explode(' ', $vocabs) : array();
         $vocabObjects = array();
-        foreach($vocids as $vocid) {
+        foreach ($vocids as $vocid) {
             $vocabObjects[] = $this->model->getVocabulary($vocid);
         }
         $parameters->setVocabularies($vocabObjects);
@@ -136,12 +136,12 @@ 
         foreach ($parameters->getAdditionalFields() as $field) {
 
             // Quick-and-dirty compactification
-            $context[$field] = 'skos:' . $field;
+            $context[$field] = 'skos:'.$field;
             foreach ($results as &$result) {
                 foreach ($result as $k => $v) {
-                    if ($k == 'skos:' . $field) {
+                    if ($k == 'skos:'.$field) {
                         $result[$field] = $v;
-                        unset($result['skos:' . $field]);
+                        unset($result['skos:'.$field]);
                     }
                 }
             }
@@ -160,7 +160,7 @@ 
         if ($request->getQueryParam('labellang')) {
             $ret['@context']['@language'] = $request->getQueryParam('labellang');
         } elseif ($request->getQueryParam('lang')) {
-            $ret['@context']['@language'] = $request->getQueryParam('lang');;
+            $ret['@context']['@language'] = $request->getQueryParam('lang'); ;
         }
         return $ret;
     }
@@ -227,7 +227,7 @@ 
                 'prefLabel' => 'skos:prefLabel',
                 'title' => 'dct:title',
                 '@language' => $request->getLang(),
-                '@base' => $this->getBaseHref() . "rest/v1/" . $vocab->getId() . "/",
+                '@base' => $this->getBaseHref()."rest/v1/".$vocab->getId()."/",
             ),
             'uri' => '',
             'id' => $vocab->getId(),
@@ -277,7 +277,7 @@ 
                 'subTypes' => array('@id' => 'void:class', '@type' => '@id'),
                 'count' => 'void:entities',
                 '@language' => $request->getLang(),
-                '@base' => $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/",
+                '@base' => $this->getBaseHref()."rest/v1/".$request->getVocab()->getId()."/",
             ),
             'uri' => '',
             'id' => $request->getVocab()->getId(),
@@ -351,7 +351,7 @@ 
                 'language' => 'void-ext:language',
                 'properties' => 'void:propertyPartition',
                 'labels' => 'void:triples',
-                '@base' => $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/",
+                '@base' => $this->getBaseHref()."rest/v1/".$request->getVocab()->getId()."/",
             ),
             'uri' => '',
             'id' => $request->getVocab()->getId(),
@@ -388,7 +388,7 @@ 
             $types[] = $type;
         }
 
-        $base = $request->getVocab() ? $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/" : $this->getBaseHref() . "rest/v1/";
+        $base = $request->getVocab() ? $this->getBaseHref()."rest/v1/".$request->getVocab()->getId()."/" : $this->getBaseHref()."rest/v1/";
 
         $ret = array_merge_recursive($this->context, array(
             '@context' => array(
@@ -548,10 +548,10 @@ 
 
         $format = $this->negotiateFormat(array_keys($urls), $request->getServerConstant('HTTP_ACCEPT'), $request->getQueryParam('format'));
         if (!$format) {
-            return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: " . implode(' ', array_keys($urls)));
+            return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: ".implode(' ', array_keys($urls)));
         }
 
-        header("Location: " . $urls[$format]);
+        header("Location: ".$urls[$format]);
     }
 
     private function returnDataResults($results, $format) {
@@ -610,7 +610,7 @@ 
 
         $format = $this->negotiateFormat(explode(' ', self::SUPPORTED_FORMATS), $request->getServerConstant('HTTP_ACCEPT'), $request->getQueryParam('format'));
         if (!$format) {
-            return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: " . self::SUPPORTED_FORMATS);
+            return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: ".self::SUPPORTED_FORMATS);
         }
 
         $vocid = $vocab ? $vocab->getId() : null;
@@ -770,7 +770,7 @@ 
                         }
                     }
                     // if the main concept scheme was not found, set 'top' to the first 'tops' (sorted alphabetically on the URIs)
-                    if (! isset($results[$uri]['top'])) {
+                    if (!isset($results[$uri]['top'])) {
                         $results[$uri]['top'] = $results[$uri]['tops'][0];
                     }
                 } else {

model/PluginRegister.php

Spacing +9 added lines, -9 removed lines

@@ -3,7 +3,7 @@ 
 class PluginRegister {
     private $requestedPlugins;
 
-    public function __construct($requestedPlugins=array()) {
+    public function __construct($requestedPlugins = array()) {
         $this->requestedPlugins = $requestedPlugins;
     }
 
@@ -31,7 +31,7 @@ 
      * @param boolean $raw interpret $type values as raw text instead of files
      * @return array
      */
-    private function filterPlugins($type, $raw=false) {
+    private function filterPlugins($type, $raw = false) {
         $plugins = $this->getPlugins();
         $ret = array();
         if (!empty($plugins)) {
@@ -43,7 +43,7 @@ 
                     }
                     else {
                         foreach ($files[$type] as $file) {
-                            array_push($ret[$name], 'plugins/' . $name . '/' . $file);
+                            array_push($ret[$name], 'plugins/'.$name.'/'.$file);
                         }
                     }
                 }
@@ -74,7 +74,7 @@ 
      * @param array $names the plugin name strings (foldernames) in an array
      * @return array
      */
-    public function getPluginsJS($names=null) {
+    public function getPluginsJS($names = null) {
         if ($names) {
             $names = array_merge($this->requestedPlugins, $names);
             return $this->filterPluginsByName('js', $names);
@@ -87,7 +87,7 @@ 
      * @param array $names the plugin name strings (foldernames) in an array
      * @return array
      */
-    public function getPluginsCSS($names=null) {
+    public function getPluginsCSS($names = null) {
         if ($names) {
             $names = array_merge($this->requestedPlugins, $names);
             return $this->filterPluginsByName('css', $names);
@@ -100,7 +100,7 @@ 
      * @param array $names the plugin name strings (foldernames) in an array
      * @return array
      */
-    public function getPluginsTemplates($names=null) {
+    public function getPluginsTemplates($names = null) {
         if ($names) {
             $names = array_merge($this->requestedPlugins, $names);
             return $this->filterPluginsByName('templates', $names);
@@ -113,15 +113,15 @@ 
      * @param array $names the plugin name strings (foldernames) in an array
      * @return array
      */
-    public function getTemplates($names=null) {
+    public function getTemplates($names = null) {
         $templateStrings = array();
         $plugins = $this->getPluginsTemplates($names);
         foreach ($plugins as $folder => $templates) {
             foreach ($templates as $path) {
                 if (file_exists($path)) {
                     $filename = explode('/', $path);
-                    $filename = $filename[sizeof($filename)-1];
-                    $id = $folder . '-' . substr($filename, 0 , (strrpos($filename, ".")));
+                    $filename = $filename[sizeof($filename) - 1];
+                    $id = $folder.'-'.substr($filename, 0, (strrpos($filename, ".")));
                     $templateStrings[$id] = file_get_contents($path);
                 }
             }

Braces +1 added lines, -2 removed lines

@@ -40,8 +40,7 @@
                     $ret[$name] = array();
                     if ($raw) {
                         $ret[$name] = $files[$type];
-                    }
-                    else {
+                    } else {
                         foreach ($files[$type] as $file) {
                             array_push($ret[$name], 'plugins/' . $name . '/' . $file);
                         }