NatLibFi /
Skosmos
| Total Complexity | 195 |
| Total Lines | 1119 |
| Duplicated Lines | 0 % |
| Changes | 7 | ||
| Bugs | 1 | Features | 2 |
Complex classes like RestController often do a lot of different things. To break such a class down, we need to identify a cohesive component within that class. A common approach to find such a component is to look for fields/methods that share the same prefixes, or suffixes.
Once you have determined the fields that belong together, you can apply the Extract Class refactoring. If the component makes sense as a sub-class, Extract Subclass is also a candidate, and is often faster.
While breaking up the class, it is a good idea to analyze how other classes use RestController, and based on these observations, apply Extract Interface, too.
| 1 | <?php |
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| 6 | class RestController extends Controller |
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| 7 | { |
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| 8 | /* supported MIME types that can be used to return RDF data */ |
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| 9 | const SUPPORTED_FORMATS = 'application/rdf+xml text/turtle application/ld+json application/json application/marcxml+xml'; |
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| 10 | /* context array template */ |
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| 11 | private $context = array( |
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| 12 | '@context' => array( |
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| 13 | 'skos' => 'http://www.w3.org/2004/02/skos/core#', |
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| 14 | 'uri' => '@id', |
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| 15 | 'type' => '@type', |
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| 16 | ), |
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| 17 | ); |
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| 18 | |||
| 19 | /** |
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| 20 | * Handles json encoding, adding the content type headers and optional callback function. |
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| 21 | * @param array $data the data to be returned. |
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| 22 | */ |
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| 23 | private function returnJson($data) |
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| 24 | { |
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| 25 | // wrap with JSONP callback if requested |
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| 26 | if (filter_input(INPUT_GET, 'callback', FILTER_SANITIZE_STRING)) { |
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| 27 | header("Content-type: application/javascript; charset=utf-8"); |
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| 28 | echo filter_input(INPUT_GET, 'callback', FILTER_UNSAFE_RAW) . "(" . json_encode($data) . ");"; |
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| 29 | return; |
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| 30 | } |
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| 31 | |||
| 32 | // otherwise negotiate suitable format for the response and return that |
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| 33 | $negotiator = new \Negotiation\Negotiator(); |
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| 34 | $priorities = array('application/json', 'application/ld+json'); |
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| 35 | $best = filter_input(INPUT_SERVER, 'HTTP_ACCEPT', FILTER_SANITIZE_STRING) ? $negotiator->getBest(filter_input(INPUT_SERVER, 'HTTP_ACCEPT', FILTER_SANITIZE_STRING), $priorities) : null; |
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| 36 | $format = ($best !== null) ? $best->getValue() : $priorities[0]; |
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| 37 | header("Content-type: $format; charset=utf-8"); |
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| 38 | header("Vary: Accept"); // inform caches that we made a choice based on Accept header |
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| 39 | echo json_encode($data); |
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| 40 | } |
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| 41 | |||
| 42 | /** |
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| 43 | * Parses and returns the limit parameter. Returns and error if the parameter is missing. |
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| 44 | */ |
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| 45 | private function parseLimit() |
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| 46 | { |
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| 47 | $limit = filter_input(INPUT_GET, 'limit', FILTER_SANITIZE_NUMBER_INT) ? filter_input(INPUT_GET, 'limit', FILTER_SANITIZE_NUMBER_INT) : $this->model->getConfig()->getDefaultTransitiveLimit(); |
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| 48 | if ($limit <= 0) { |
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| 49 | return $this->returnError(400, "Bad Request", "Invalid limit parameter"); |
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| 50 | } |
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| 51 | |||
| 52 | return $limit; |
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| 53 | } |
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| 54 | |||
| 55 | |||
| 56 | /** Global REST methods **/ |
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| 57 | |||
| 58 | /** |
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| 59 | * Returns all the vocabularies available on the server in a json object. |
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| 60 | */ |
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| 61 | public function vocabularies($request) |
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| 62 | { |
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| 63 | if (!$request->getLang()) { |
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| 64 | return $this->returnError(400, "Bad Request", "lang parameter missing"); |
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| 65 | } |
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| 66 | |||
| 67 | $this->setLanguageProperties($request->getLang()); |
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| 68 | |||
| 69 | $vocabs = array(); |
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| 70 | foreach ($this->model->getVocabularies() as $voc) { |
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| 71 | $vocabs[$voc->getId()] = $voc->getConfig()->getTitle($request->getLang()); |
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| 72 | } |
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| 73 | ksort($vocabs); |
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| 74 | $results = array(); |
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| 75 | foreach ($vocabs as $id => $title) { |
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| 76 | $results[] = array( |
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| 77 | 'uri' => $id, |
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| 78 | 'id' => $id, |
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| 79 | 'title' => $title); |
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| 80 | } |
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| 81 | |||
| 82 | /* encode the results in a JSON-LD compatible array */ |
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| 83 | $ret = array( |
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| 84 | '@context' => array( |
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| 85 | 'rdfs' => 'http://www.w3.org/2000/01/rdf-schema#', |
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| 86 | 'onki' => 'http://schema.onki.fi/onki#', |
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| 87 | 'title' => array('@id' => 'rdfs:label', '@language' => $request->getLang()), |
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| 88 | 'vocabularies' => 'onki:hasVocabulary', |
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| 89 | 'id' => 'onki:vocabularyIdentifier', |
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| 90 | 'uri' => '@id', |
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| 91 | '@base' => $this->getBaseHref() . "rest/v1/vocabularies", |
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| 92 | ), |
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| 93 | 'uri' => '', |
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| 94 | 'vocabularies' => $results, |
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| 95 | ); |
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| 96 | |||
| 97 | return $this->returnJson($ret); |
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| 98 | } |
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| 99 | |||
| 100 | private function constructSearchParameters($request) |
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| 101 | { |
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| 102 | $parameters = new ConceptSearchParameters($request, $this->model->getConfig(), true); |
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| 103 | |||
| 104 | $vocabs = $request->getQueryParam('vocab'); # optional |
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| 105 | // convert to vocids array to support multi-vocabulary search |
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| 106 | $vocids = ($vocabs !== null && $vocabs !== '') ? explode(' ', $vocabs) : array(); |
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| 107 | $vocabObjects = array(); |
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| 108 | foreach($vocids as $vocid) { |
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| 109 | $vocabObjects[] = $this->model->getVocabulary($vocid); |
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| 110 | } |
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| 111 | $parameters->setVocabularies($vocabObjects); |
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| 112 | return $parameters; |
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| 113 | } |
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| 114 | |||
| 115 | private function transformSearchResults($request, $results, $parameters) |
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| 116 | { |
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| 117 | // before serializing to JSON, get rid of the Vocabulary object that came with each resource |
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| 118 | foreach ($results as &$res) { |
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| 119 | unset($res['voc']); |
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| 120 | } |
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| 121 | |||
| 122 | $context = array( |
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| 123 | 'skos' => 'http://www.w3.org/2004/02/skos/core#', |
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| 124 | 'isothes' => 'http://purl.org/iso25964/skos-thes#', |
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| 125 | 'onki' => 'http://schema.onki.fi/onki#', |
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| 126 | 'uri' => '@id', |
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| 127 | 'type' => '@type', |
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| 128 | 'results' => array( |
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| 129 | '@id' => 'onki:results', |
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| 130 | '@container' => '@list', |
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| 131 | ), |
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| 132 | 'prefLabel' => 'skos:prefLabel', |
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| 133 | 'altLabel' => 'skos:altLabel', |
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| 134 | 'hiddenLabel' => 'skos:hiddenLabel', |
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| 135 | ); |
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| 136 | foreach ($parameters->getAdditionalFields() as $field) { |
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| 137 | |||
| 138 | // Quick-and-dirty compactification |
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| 139 | $context[$field] = 'skos:' . $field; |
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| 140 | foreach ($results as &$result) { |
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| 141 | foreach ($result as $k => $v) { |
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| 142 | if ($k == 'skos:' . $field) { |
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| 143 | $result[$field] = $v; |
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| 144 | unset($result['skos:' . $field]); |
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| 145 | } |
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| 146 | } |
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| 147 | } |
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| 148 | } |
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| 149 | |||
| 150 | $ret = array( |
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| 151 | '@context' => $context, |
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| 152 | 'uri' => '', |
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| 153 | 'results' => $results, |
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| 154 | ); |
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| 155 | |||
| 156 | if (isset($results[0]['prefLabels'])) { |
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| 157 | $ret['@context']['prefLabels'] = array('@id' => 'skos:prefLabel', '@container' => '@language'); |
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| 158 | } |
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| 159 | |||
| 160 | if ($request->getQueryParam('labellang')) { |
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| 161 | $ret['@context']['@language'] = $request->getQueryParam('labellang'); |
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| 162 | } elseif ($request->getQueryParam('lang')) { |
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| 163 | $ret['@context']['@language'] = $request->getQueryParam('lang'); |
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| 164 | } |
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| 165 | return $ret; |
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| 166 | } |
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| 167 | |||
| 168 | /** |
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| 169 | * Performs the search function calls. And wraps the result in a json-ld object. |
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| 170 | * @param Request $request |
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| 171 | */ |
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| 172 | public function search($request) |
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| 193 | } |
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| 194 | |||
| 195 | /** Vocabulary-specific methods **/ |
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| 196 | |||
| 197 | /** |
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| 198 | * Loads the vocabulary metadata. And wraps the result in a json-ld object. |
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| 199 | * @param Request $request |
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| 200 | */ |
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| 201 | public function vocabularyInformation($request) |
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| 248 | } |
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| 249 | |||
| 250 | /** |
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| 251 | * Loads the vocabulary metadata. And wraps the result in a json-ld object. |
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| 252 | * @param Request $request |
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| 253 | */ |
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| 254 | public function vocabularyStatistics($request) |
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| 255 | { |
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| 256 | if ($this->notModified($request->getVocab())) { |
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| 257 | return null; |
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| 258 | } |
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| 259 | $this->setLanguageProperties($request->getLang()); |
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| 260 | $arrayClass = $request->getVocab()->getConfig()->getArrayClassURI(); |
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| 261 | $groupClass = $request->getVocab()->getConfig()->getGroupClassURI(); |
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| 262 | $queryLang = $request->getQueryParam('lang') ?? $request->getLang(); |
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| 263 | $vocabStats = $request->getVocab()->getStatistics($queryLang, $arrayClass, $groupClass); |
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| 264 | $types = array('http://www.w3.org/2004/02/skos/core#Concept', 'http://www.w3.org/2004/02/skos/core#Collection', $arrayClass, $groupClass); |
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| 265 | $subTypes = array(); |
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| 266 | foreach ($vocabStats as $subtype) { |
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| 267 | if (!in_array($subtype['type'], $types)) { |
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| 268 | $subTypes[] = $subtype; |
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| 269 | } |
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| 270 | } |
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| 271 | |||
| 272 | /* encode the results in a JSON-LD compatible array */ |
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| 273 | $ret = array( |
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| 274 | '@context' => array( |
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| 275 | 'rdfs' => 'http://www.w3.org/2000/01/rdf-schema#', |
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| 276 | 'skos' => 'http://www.w3.org/2004/02/skos/core#', |
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| 277 | 'void' => 'http://rdfs.org/ns/void#', |
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| 278 | 'onki' => 'http://schema.onki.fi/onki#', |
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| 279 | 'uri' => '@id', |
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| 280 | 'id' => 'onki:vocabularyIdentifier', |
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| 281 | 'concepts' => 'void:classPartition', |
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| 282 | 'label' => 'rdfs:label', |
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| 283 | 'class' => array('@id' => 'void:class', '@type' => '@id'), |
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| 284 | 'subTypes' => array('@id' => 'void:class', '@type' => '@id'), |
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| 285 | 'count' => 'void:entities', |
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| 286 | '@language' => $request->getLang(), |
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| 287 | '@base' => $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/", |
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| 288 | ), |
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| 289 | 'uri' => '', |
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| 290 | 'id' => $request->getVocab()->getId(), |
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| 291 | 'title' => $request->getVocab()->getConfig()->getTitle(), |
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| 292 | 'concepts' => array( |
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| 293 | 'class' => 'http://www.w3.org/2004/02/skos/core#Concept', |
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| 294 | 'label' => gettext('skos:Concept'), |
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| 295 | 'count' => isset($vocabStats['http://www.w3.org/2004/02/skos/core#Concept']) ? $vocabStats['http://www.w3.org/2004/02/skos/core#Concept']['count'] : 0, |
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| 296 | 'deprecatedCount' => isset($vocabStats['http://www.w3.org/2004/02/skos/core#Concept']) ? $vocabStats['http://www.w3.org/2004/02/skos/core#Concept']['deprecatedCount'] : 0, |
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| 297 | ), |
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| 298 | 'subTypes' => $subTypes, |
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| 299 | ); |
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| 300 | |||
| 301 | if (isset($vocabStats['http://www.w3.org/2004/02/skos/core#Collection'])) { |
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| 302 | $ret['conceptGroups'] = array( |
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| 303 | 'class' => 'http://www.w3.org/2004/02/skos/core#Collection', |
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| 304 | 'label' => gettext('skos:Collection'), |
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| 305 | 'count' => $vocabStats['http://www.w3.org/2004/02/skos/core#Collection']['count'], |
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| 306 | 'deprecatedCount' => $vocabStats['http://www.w3.org/2004/02/skos/core#Collection']['deprecatedCount'], |
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| 307 | ); |
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| 308 | |||
| 309 | } else if (isset($vocabStats[$groupClass])) { |
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| 310 | $ret['conceptGroups'] = array( |
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| 311 | 'class' => $groupClass, |
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| 312 | 'label' => isset($vocabStats[$groupClass]['label']) ? $vocabStats[$groupClass]['label'] : gettext(EasyRdf\RdfNamespace::shorten($groupClass)), |
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| 313 | 'count' => $vocabStats[$groupClass]['count'], |
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| 314 | 'deprecatedCount' => $vocabStats[$groupClass]['deprecatedCount'], |
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| 315 | ); |
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| 316 | } else if (isset($vocabStats[$arrayClass])) { |
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| 317 | $ret['arrays'] = array( |
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| 318 | 'class' => $arrayClass, |
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| 319 | 'label' => isset($vocabStats[$arrayClass]['label']) ? $vocabStats[$arrayClass]['label'] : gettext(EasyRdf\RdfNamespace::shorten($arrayClass)), |
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| 320 | 'count' => $vocabStats[$arrayClass]['count'], |
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| 321 | 'deprecatedCount' => $vocabStats[$arrayClass]['deprecatedCount'], |
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| 322 | ); |
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| 323 | } |
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| 324 | |||
| 325 | return $this->returnJson($ret); |
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| 326 | } |
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| 327 | |||
| 328 | /** |
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| 329 | * Loads the vocabulary metadata. And wraps the result in a json-ld object. |
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| 330 | * @param Request $request |
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| 331 | */ |
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| 332 | public function labelStatistics($request) |
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| 333 | { |
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| 334 | if ($this->notModified($request->getVocab())) { |
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| 335 | return null; |
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| 336 | } |
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| 337 | $lang = $request->getLang(); |
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| 338 | $this->setLanguageProperties($request->getLang()); |
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| 339 | $vocabStats = $request->getVocab()->getLabelStatistics(); |
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| 340 | |||
| 341 | /* encode the results in a JSON-LD compatible array */ |
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| 342 | $counts = array(); |
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| 343 | foreach ($vocabStats['terms'] as $proplang => $properties) { |
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| 344 | $langdata = array('language' => $proplang); |
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| 345 | if ($lang) { |
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| 346 | $langdata['literal'] = Punic\Language::getName($proplang, $lang); |
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| 347 | } |
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| 348 | |||
| 349 | $langdata['properties'] = array(); |
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| 350 | foreach ($properties as $prop => $value) { |
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| 351 | $langdata['properties'][] = array('property' => $prop, 'labels' => $value); |
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| 352 | } |
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| 353 | $counts[] = $langdata; |
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| 354 | } |
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| 355 | |||
| 356 | $ret = array( |
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| 357 | '@context' => array( |
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| 358 | 'rdfs' => 'http://www.w3.org/2000/01/rdf-schema#', |
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| 359 | 'skos' => 'http://www.w3.org/2004/02/skos/core#', |
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| 360 | 'void' => 'http://rdfs.org/ns/void#', |
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| 361 | 'void-ext' => 'http://ldf.fi/void-ext#', |
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| 362 | 'onki' => 'http://schema.onki.fi/onki#', |
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| 363 | 'uri' => '@id', |
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| 364 | 'id' => 'onki:vocabularyIdentifier', |
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| 365 | 'languages' => 'void-ext:languagePartition', |
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| 366 | 'language' => 'void-ext:language', |
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| 367 | 'properties' => 'void:propertyPartition', |
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| 368 | 'labels' => 'void:triples', |
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| 369 | '@base' => $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/", |
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| 370 | ), |
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| 371 | 'uri' => '', |
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| 372 | 'id' => $request->getVocab()->getId(), |
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| 373 | 'title' => $request->getVocab()->getConfig()->getTitle($lang), |
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| 374 | 'languages' => $counts, |
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| 375 | ); |
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| 376 | |||
| 377 | if ($lang) { |
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| 378 | $ret['@context']['literal'] = array('@id' => 'rdfs:label', '@language' => $lang); |
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| 379 | } |
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| 380 | |||
| 381 | return $this->returnJson($ret); |
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| 382 | } |
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| 383 | |||
| 384 | /** |
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| 385 | * Loads the vocabulary type metadata. And wraps the result in a json-ld object. |
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| 386 | * @param Request $request |
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| 387 | */ |
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| 388 | public function types($request) |
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| 389 | { |
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| 390 | $vocid = $request->getVocab() ? $request->getVocab()->getId() : null; |
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| 391 | if ($vocid === null && !$request->getLang()) { |
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| 392 | return $this->returnError(400, "Bad Request", "lang parameter missing"); |
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| 393 | } |
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| 394 | if ($this->notModified($request->getVocab())) { |
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| 395 | return null; |
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| 396 | } |
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| 397 | |||
| 398 | $this->setLanguageProperties($request->getLang()); |
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| 399 | |||
| 400 | $queriedtypes = $this->model->getTypes($vocid, $request->getLang()); |
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| 401 | |||
| 402 | $types = array(); |
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| 403 | |||
| 404 | /* encode the results in a JSON-LD compatible array */ |
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| 405 | foreach ($queriedtypes as $uri => $typedata) { |
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| 406 | $type = array_merge(array('uri' => $uri), $typedata); |
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| 407 | $types[] = $type; |
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| 408 | } |
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| 409 | |||
| 410 | $base = $request->getVocab() ? $this->getBaseHref() . "rest/v1/" . $request->getVocab()->getId() . "/" : $this->getBaseHref() . "rest/v1/"; |
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| 411 | |||
| 412 | $ret = array_merge_recursive($this->context, array( |
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| 413 | '@context' => array( |
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| 414 | 'rdfs' => 'http://www.w3.org/2000/01/rdf-schema#', |
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| 415 | 'onki' => 'http://schema.onki.fi/onki#', |
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| 416 | 'label' => 'rdfs:label', |
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| 417 | 'superclass' => array('@id' => 'rdfs:subClassOf', '@type' => '@id'), |
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| 418 | 'types' => 'onki:hasType', |
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| 419 | '@language' => $request->getLang(), |
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| 420 | '@base' => $base, |
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| 421 | ), |
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| 422 | 'uri' => '', |
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| 423 | 'types' => $types) |
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| 424 | ); |
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| 425 | |||
| 426 | return $this->returnJson($ret); |
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| 427 | } |
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| 428 | |||
| 429 | private function findLookupHits($results, $label, $lang) |
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| 430 | { |
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| 431 | $hits = array(); |
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| 432 | // case 1: exact match on preferred label |
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| 433 | foreach ($results as $res) { |
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| 434 | if (isset($res['prefLabel']) && $res['prefLabel'] == $label) { |
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| 435 | $hits[] = $res; |
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| 436 | } |
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| 437 | } |
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| 438 | if (sizeof($hits) > 0) return $hits; |
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| 439 | |||
| 440 | // case 2: case-insensitive match on preferred label |
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| 441 | foreach ($results as $res) { |
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| 442 | if (isset($res['prefLabel']) && strtolower($res['prefLabel']) == strtolower($label)) { |
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| 443 | $hits[] = $res; |
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| 444 | } |
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| 445 | } |
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| 446 | if (sizeof($hits) > 0) return $hits; |
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| 447 | |||
| 448 | if ($lang === null) { |
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| 449 | // case 1A: exact match on preferred label in any language |
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| 450 | foreach ($results as $res) { |
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| 451 | if (isset($res['matchedPrefLabel']) && $res['matchedPrefLabel'] == $label) { |
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| 452 | $res['prefLabel'] = $res['matchedPrefLabel']; |
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| 453 | unset($res['matchedPrefLabel']); |
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| 454 | $hits[] = $res; |
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| 455 | } |
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| 456 | } |
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| 457 | if (sizeof($hits) > 0) return $hits; |
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| 458 | |||
| 459 | // case 2A: case-insensitive match on preferred label in any language |
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| 460 | foreach ($results as $res) { |
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| 461 | if (isset($res['matchedPrefLabel']) && strtolower($res['matchedPrefLabel']) == strtolower($label)) { |
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| 462 | $res['prefLabel'] = $res['matchedPrefLabel']; |
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| 463 | unset($res['matchedPrefLabel']); |
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| 464 | $hits[] = $res; |
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| 465 | } |
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| 466 | } |
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| 467 | if (sizeof($hits) > 0) return $hits; |
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| 468 | } |
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| 469 | |||
| 470 | // case 3: exact match on alternate label |
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| 471 | foreach ($results as $res) { |
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| 472 | if (isset($res['altLabel']) && $res['altLabel'] == $label) { |
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| 473 | $hits[] = $res; |
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| 474 | } |
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| 475 | } |
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| 476 | if (sizeof($hits) > 0) return $hits; |
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| 477 | |||
| 478 | |||
| 479 | // case 4: case-insensitive match on alternate label |
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| 480 | foreach ($results as $res) { |
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| 481 | if (isset($res['altLabel']) && strtolower($res['altLabel']) == strtolower($label)) { |
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| 482 | $hits[] = $res; |
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| 483 | } |
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| 484 | } |
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| 485 | if (sizeof($hits) > 0) return $hits; |
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| 486 | |||
| 487 | return $hits; |
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| 488 | } |
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| 489 | |||
| 490 | private function transformLookupResults($lang, $hits) |
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| 491 | { |
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| 492 | if (sizeof($hits) == 0) { |
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| 493 | // no matches found |
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| 494 | return; |
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| 495 | } |
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| 496 | |||
| 497 | // found matches, getting rid of Vocabulary objects |
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| 498 | foreach ($hits as &$res) { |
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| 499 | unset($res['voc']); |
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| 500 | } |
||
| 501 | |||
| 502 | $ret = array_merge_recursive($this->context, array( |
||
| 503 | '@context' => array('onki' => 'http://schema.onki.fi/onki#', 'results' => array('@id' => 'onki:results'), 'prefLabel' => 'skos:prefLabel', 'altLabel' => 'skos:altLabel', 'hiddenLabel' => 'skos:hiddenLabel'), |
||
| 504 | 'result' => $hits) |
||
| 505 | ); |
||
| 506 | |||
| 507 | if ($lang) { |
||
| 508 | $ret['@context']['@language'] = $lang; |
||
| 509 | } |
||
| 510 | |||
| 511 | return $ret; |
||
| 512 | } |
||
| 513 | |||
| 514 | /** |
||
| 515 | * Used for finding terms by their exact prefLabel. Wraps the result in a json-ld object. |
||
| 516 | * @param Request $request |
||
| 517 | */ |
||
| 518 | public function lookup($request) |
||
| 519 | { |
||
| 520 | $label = $request->getQueryParamRaw('label'); |
||
| 521 | if (!$label) { |
||
| 522 | return $this->returnError(400, "Bad Request", "label parameter missing"); |
||
| 523 | } |
||
| 524 | |||
| 525 | $lang = $request->getQueryParam('lang'); |
||
| 526 | $parameters = new ConceptSearchParameters($request, $this->model->getConfig(), true); |
||
| 527 | $results = $this->model->searchConcepts($parameters); |
||
| 528 | $hits = $this->findLookupHits($results, $label, $lang); |
||
| 529 | $ret = $this->transformLookupResults($lang, $hits); |
||
| 530 | if ($ret === null) { |
||
| 531 | return $this->returnError(404, 'Not Found', "Could not find label '$label'"); |
||
| 532 | } |
||
| 533 | return $this->returnJson($ret); |
||
| 534 | } |
||
| 535 | |||
| 536 | /** |
||
| 537 | * Queries the top concepts of a vocabulary and wraps the results in a json-ld object. |
||
| 538 | * @param Request $request |
||
| 539 | * @return object json-ld object |
||
| 540 | */ |
||
| 541 | public function topConcepts($request) |
||
| 542 | { |
||
| 543 | $vocab = $request->getVocab(); |
||
| 544 | if ($this->notModified($vocab)) { |
||
| 545 | return null; |
||
| 546 | } |
||
| 547 | $scheme = $request->getQueryParam('scheme'); |
||
| 548 | if (!$scheme) { |
||
| 549 | $scheme = $vocab->getConfig()->showConceptSchemesInHierarchy() ? array_keys($vocab->getConceptSchemes()) : $vocab->getDefaultConceptScheme(); |
||
| 550 | } |
||
| 551 | |||
| 552 | /* encode the results in a JSON-LD compatible array */ |
||
| 553 | $topconcepts = $vocab->getTopConcepts($scheme, $request->getLang()); |
||
| 554 | |||
| 555 | $ret = array_merge_recursive($this->context, array( |
||
| 556 | '@context' => array('onki' => 'http://schema.onki.fi/onki#', 'topconcepts' => 'skos:hasTopConcept', 'notation' => 'skos:notation', 'label' => 'skos:prefLabel', '@language' => $request->getLang()), |
||
| 557 | 'uri' => $scheme, |
||
| 558 | 'topconcepts' => $topconcepts) |
||
| 559 | ); |
||
| 560 | |||
| 561 | return $this->returnJson($ret); |
||
| 562 | } |
||
| 563 | |||
| 564 | private function redirectToVocabData($request) { |
||
| 565 | $urls = $request->getVocab()->getConfig()->getDataURLs(); |
||
| 566 | if (sizeof($urls) == 0) { |
||
| 567 | $vocid = $request->getVocab()->getId(); |
||
| 568 | return $this->returnError('404', 'Not Found', "No download source URL known for vocabulary $vocid"); |
||
| 569 | } |
||
| 570 | |||
| 571 | $format = $this->negotiateFormat(array_keys($urls), $request->getServerConstant('HTTP_ACCEPT'), $request->getQueryParam('format')); |
||
| 572 | if (!$format) { |
||
| 573 | return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: " . implode(' ', array_keys($urls))); |
||
| 574 | } |
||
| 575 | if (is_array($urls[$format])) { |
||
| 576 | $arr = $urls[$format]; |
||
| 577 | $dataLang = $request->getLang(); |
||
| 578 | if (isset($arr[$dataLang])) { |
||
| 579 | header("Location: " . $arr[$dataLang]); |
||
| 580 | } else { |
||
| 581 | $vocid = $request->getVocab()->getId(); |
||
| 582 | return $this->returnError('404', 'Not Found', "No download source URL known for vocabulary $vocid in language $dataLang"); |
||
| 583 | } |
||
| 584 | } else { |
||
| 585 | header("Location: " . $urls[$format]); |
||
| 586 | } |
||
| 587 | } |
||
| 588 | |||
| 589 | private function returnDataResults($results, $format) { |
||
| 590 | if ($format == 'application/ld+json' || $format == 'application/json') { |
||
| 591 | // further compact JSON-LD document using a context |
||
| 592 | $context = array( |
||
| 593 | 'skos' => 'http://www.w3.org/2004/02/skos/core#', |
||
| 594 | 'isothes' => 'http://purl.org/iso25964/skos-thes#', |
||
| 595 | 'rdfs' => 'http://www.w3.org/2000/01/rdf-schema#', |
||
| 596 | 'owl' => 'http://www.w3.org/2002/07/owl#', |
||
| 597 | 'dct' => 'http://purl.org/dc/terms/', |
||
| 598 | 'dc11' => 'http://purl.org/dc/elements/1.1/', |
||
| 599 | 'uri' => '@id', |
||
| 600 | 'type' => '@type', |
||
| 601 | 'lang' => '@language', |
||
| 602 | 'value' => '@value', |
||
| 603 | 'graph' => '@graph', |
||
| 604 | 'label' => 'rdfs:label', |
||
| 605 | 'prefLabel' => 'skos:prefLabel', |
||
| 606 | 'altLabel' => 'skos:altLabel', |
||
| 607 | 'hiddenLabel' => 'skos:hiddenLabel', |
||
| 608 | 'broader' => 'skos:broader', |
||
| 609 | 'narrower' => 'skos:narrower', |
||
| 610 | 'related' => 'skos:related', |
||
| 611 | 'inScheme' => 'skos:inScheme', |
||
| 612 | 'exactMatch' => 'skos:exactMatch', |
||
| 613 | 'closeMatch' => 'skos:closeMatch', |
||
| 614 | 'broadMatch' => 'skos:broadMatch', |
||
| 615 | 'narrowMatch' => 'skos:narrowMatch', |
||
| 616 | 'relatedMatch' => 'skos:relatedMatch', |
||
| 617 | ); |
||
| 618 | $compactJsonLD = \ML\JsonLD\JsonLD::compact($results, json_encode($context)); |
||
| 619 | $results = \ML\JsonLD\JsonLD::toString($compactJsonLD); |
||
| 620 | } |
||
| 621 | |||
| 622 | header("Content-type: $format; charset=utf-8"); |
||
| 623 | echo $results; |
||
| 624 | } |
||
| 625 | |||
| 626 | /** |
||
| 627 | * Download a concept as json-ld or redirect to download the whole vocabulary. |
||
| 628 | * @param Request $request |
||
| 629 | * @return object json-ld formatted concept. |
||
| 630 | */ |
||
| 631 | public function data($request) |
||
| 632 | { |
||
| 633 | $vocab = $request->getVocab(); |
||
| 634 | if ($this->notModified($request->getVocab())) { |
||
| 635 | return null; |
||
| 636 | } |
||
| 637 | |||
| 638 | if ($request->getUri()) { |
||
| 639 | $uri = $request->getUri(); |
||
| 640 | } else if ($vocab !== null) { // whole vocabulary - redirect to download URL |
||
| 641 | return $this->redirectToVocabData($request); |
||
| 642 | } else { |
||
| 643 | return $this->returnError(400, 'Bad Request', "uri parameter missing"); |
||
| 644 | } |
||
| 645 | |||
| 646 | $format = $this->negotiateFormat(explode(' ', self::SUPPORTED_FORMATS), $request->getServerConstant('HTTP_ACCEPT'), $request->getQueryParam('format')); |
||
| 647 | if (!$format) { |
||
| 648 | return $this->returnError(406, 'Not Acceptable', "Unsupported format. Supported MIME types are: " . self::SUPPORTED_FORMATS); |
||
| 649 | } |
||
| 650 | |||
| 651 | $vocid = $vocab ? $vocab->getId() : null; |
||
| 652 | $results = $this->model->getRDF($vocid, $uri, $format); |
||
| 653 | if (empty($results)) { |
||
| 654 | return $this->returnError(404, 'Bad Request', "no concept found with given uri"); |
||
| 655 | } |
||
| 656 | return $this->returnDataResults($results, $format); |
||
| 657 | } |
||
| 658 | |||
| 659 | /** |
||
| 660 | * Get the mappings associated with a concept, enriched with labels and notations. |
||
| 661 | * Returns a JSKOS-compatible JSON object. |
||
| 662 | * @param Request $request |
||
| 663 | * @throws Exception if the vocabulary ID is not found in configuration |
||
| 664 | */ |
||
| 665 | public function mappings(Request $request) |
||
| 666 | { |
||
| 667 | $this->setLanguageProperties($request->getLang()); |
||
| 668 | $vocab = $request->getVocab(); |
||
| 669 | if ($this->notModified($vocab)) { |
||
| 670 | return null; |
||
| 671 | } |
||
| 672 | |||
| 673 | $uri = $request->getUri(); |
||
| 674 | if (!$uri) { |
||
| 675 | return $this->returnError(400, 'Bad Request', "uri parameter missing"); |
||
| 676 | } |
||
| 677 | |||
| 678 | $queryExVocabs = $request->getQueryParamBoolean('external', true); |
||
| 679 | |||
| 680 | $results = $vocab->getConceptInfo($uri, $request->getContentLang()); |
||
| 681 | if (empty($results)) { |
||
| 682 | return $this->returnError(404, 'Bad Request', "no concept found with given uri"); |
||
| 683 | } |
||
| 684 | |||
| 685 | $concept = $results[0]; |
||
| 686 | |||
| 687 | $mappings = []; |
||
| 688 | foreach ($concept->getMappingProperties() as $mappingProperty) { |
||
| 689 | foreach ($mappingProperty->getValues() as $mappingPropertyValue) { |
||
| 690 | $hrefLink = $this->linkUrlFilter($mappingPropertyValue->getUri(), $mappingPropertyValue->getExVocab(), $request->getLang(), 'page', $request->getContentLang()); |
||
| 691 | $mappings[] = $mappingPropertyValue->asJskos($queryExVocabs, $request->getLang(), $hrefLink); |
||
| 692 | } |
||
| 693 | } |
||
| 694 | |||
| 695 | $ret = array( |
||
| 696 | 'mappings' => $mappings, |
||
| 697 | 'graph' => $concept->dumpJsonLd() |
||
| 698 | ); |
||
| 699 | |||
| 700 | return $this->returnJson($ret); |
||
| 701 | } |
||
| 702 | |||
| 703 | /** |
||
| 704 | * Used for querying labels for a uri. |
||
| 705 | * @param Request $request |
||
| 706 | * @return object json-ld wrapped labels. |
||
| 707 | */ |
||
| 708 | public function label($request) |
||
| 709 | { |
||
| 710 | if (!$request->getUri()) { |
||
| 711 | return $this->returnError(400, "Bad Request", "uri parameter missing"); |
||
| 712 | } |
||
| 713 | |||
| 714 | if ($this->notModified($request->getVocab())) { |
||
| 715 | return null; |
||
| 716 | } |
||
| 717 | |||
| 718 | $vocab = $request->getVocab(); |
||
| 719 | if ($vocab === null) { |
||
| 720 | $vocab = $this->model->guessVocabularyFromUri($request->getUri()); |
||
| 721 | } |
||
| 722 | if ($vocab === null) { |
||
| 723 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 724 | } |
||
| 725 | |||
| 726 | $labelResults = $vocab->getAllConceptLabels($request->getUri(), $request->getLang()); |
||
| 727 | if ($labelResults === null) { |
||
| 728 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 729 | } |
||
| 730 | |||
| 731 | // there should be only one preferred label so no need for an array |
||
| 732 | if (array_key_exists('prefLabel', $labelResults)) { |
||
| 733 | $labelResults['prefLabel'] = $labelResults['prefLabel'][0]; |
||
| 734 | } |
||
| 735 | |||
| 736 | $ret = array_merge_recursive($this->context, |
||
| 737 | array('@context' => array('prefLabel' => 'skos:prefLabel', 'altLabel' => 'skos:altLabel', 'hiddenLabel' => 'skos:hiddenLabel', '@language' => $request->getLang()), |
||
| 738 | 'uri' => $request->getUri()), |
||
| 739 | $labelResults); |
||
| 740 | |||
| 741 | return $this->returnJson($ret); |
||
| 742 | } |
||
| 743 | |||
| 744 | /** |
||
| 745 | * Query for the available letters in the alphabetical index. |
||
| 746 | * @param Request $request |
||
| 747 | * @return object JSON-LD wrapped list of letters |
||
| 748 | */ |
||
| 749 | |||
| 750 | public function indexLetters($request) |
||
| 767 | } |
||
| 768 | |||
| 769 | /** |
||
| 770 | * Query for the concepts with terms starting with a given letter in the |
||
| 771 | * alphabetical index. |
||
| 772 | * @param Request $request |
||
| 773 | * @return object JSON-LD wrapped list of terms/concepts |
||
| 774 | */ |
||
| 775 | |||
| 776 | public function indexConcepts($letter, $request) |
||
| 777 | { |
||
| 778 | $this->setLanguageProperties($request->getLang()); |
||
| 779 | |||
| 780 | $offset_param = $request->getQueryParam('offset'); |
||
| 781 | $offset = (is_numeric($offset_param) && $offset_param >= 0) ? $offset_param : 0; |
||
| 782 | $limit_param = $request->getQueryParam('limit'); |
||
| 783 | $limit = (is_numeric($limit_param) && $limit_param >= 0) ? $limit_param : 0; |
||
| 784 | |||
| 785 | $concepts = $request->getVocab()->searchConceptsAlphabetical($letter, $limit, $offset, $request->getLang()); |
||
| 786 | |||
| 787 | $ret = array_merge_recursive($this->context, array( |
||
| 788 | '@context' => array( |
||
| 789 | 'indexConcepts' => array( |
||
| 790 | '@id' => 'skosmos:indexConcepts', |
||
| 791 | '@container' => '@list' |
||
| 792 | ) |
||
| 793 | ), |
||
| 794 | 'uri' => '', |
||
| 795 | 'indexConcepts' => $concepts) |
||
| 796 | ); |
||
| 797 | return $this->returnJson($ret); |
||
| 798 | } |
||
| 799 | |||
| 800 | private function transformPropertyResults($uri, $lang, $objects, $propname, $propuri) |
||
| 801 | { |
||
| 802 | $results = array(); |
||
| 803 | foreach ($objects as $objuri => $vals) { |
||
| 804 | $results[] = array('uri' => $objuri, 'prefLabel' => $vals['label']); |
||
| 805 | } |
||
| 806 | |||
| 807 | return array_merge_recursive($this->context, array( |
||
| 808 | '@context' => array('prefLabel' => 'skos:prefLabel', $propname => $propuri, '@language' => $lang), |
||
| 809 | 'uri' => $uri, |
||
| 810 | $propname => $results) |
||
| 811 | ); |
||
| 812 | } |
||
| 813 | |||
| 814 | private function transformTransitivePropertyResults($uri, $lang, $objects, $tpropname, $tpropuri, $dpropname, $dpropuri) |
||
| 829 | ); |
||
| 830 | } |
||
| 831 | |||
| 832 | /** |
||
| 833 | * Used for querying broader relations for a concept. |
||
| 834 | * @param Request $request |
||
| 835 | * @return object json-ld wrapped broader concept uris and labels. |
||
| 836 | */ |
||
| 837 | public function broader($request) |
||
| 838 | { |
||
| 839 | if ($this->notModified($request->getVocab())) { |
||
| 840 | return null; |
||
| 841 | } |
||
| 842 | $broaders = $request->getVocab()->getConceptBroaders($request->getUri(), $request->getLang()); |
||
| 843 | if ($broaders === null) { |
||
| 844 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 845 | } |
||
| 846 | $ret = $this->transformPropertyResults($request->getUri(), $request->getLang(), $broaders, "broader", "skos:broader"); |
||
| 847 | return $this->returnJson($ret); |
||
| 848 | } |
||
| 849 | |||
| 850 | /** |
||
| 851 | * Used for querying broader transitive relations for a concept. |
||
| 852 | * @param Request $request |
||
| 853 | * @return object json-ld wrapped broader transitive concept uris and labels. |
||
| 854 | */ |
||
| 855 | public function broaderTransitive($request) |
||
| 856 | { |
||
| 857 | if ($this->notModified($request->getVocab())) { |
||
| 858 | return null; |
||
| 859 | } |
||
| 860 | $broaders = $request->getVocab()->getConceptTransitiveBroaders($request->getUri(), $this->parseLimit(), false, $request->getLang()); |
||
| 861 | if (empty($broaders)) { |
||
| 862 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 863 | } |
||
| 864 | $ret = $this->transformTransitivePropertyResults($request->getUri(), $request->getLang(), $broaders, "broaderTransitive", "skos:broaderTransitive", "broader", "skos:broader"); |
||
| 865 | return $this->returnJson($ret); |
||
| 866 | } |
||
| 867 | |||
| 868 | /** |
||
| 869 | * Used for querying narrower relations for a concept. |
||
| 870 | * @param Request $request |
||
| 871 | * @return object json-ld wrapped narrower concept uris and labels. |
||
| 872 | */ |
||
| 873 | public function narrower($request) |
||
| 874 | { |
||
| 875 | if ($this->notModified($request->getVocab())) { |
||
| 876 | return null; |
||
| 877 | } |
||
| 878 | $narrowers = $request->getVocab()->getConceptNarrowers($request->getUri(), $request->getLang()); |
||
| 879 | if ($narrowers === null) { |
||
| 880 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 881 | } |
||
| 882 | $ret = $this->transformPropertyResults($request->getUri(), $request->getLang(), $narrowers, "narrower", "skos:narrower"); |
||
| 883 | return $this->returnJson($ret); |
||
| 884 | } |
||
| 885 | |||
| 886 | /** |
||
| 887 | * Used for querying narrower transitive relations for a concept. |
||
| 888 | * @param Request $request |
||
| 889 | * @return object json-ld wrapped narrower transitive concept uris and labels. |
||
| 890 | */ |
||
| 891 | public function narrowerTransitive($request) |
||
| 902 | } |
||
| 903 | |||
| 904 | /** |
||
| 905 | * Used for querying broader transitive relations |
||
| 906 | * and some narrowers for a concept in the hierarchy view. |
||
| 907 | * @param Request $request |
||
| 908 | * @return object json-ld wrapped hierarchical concept uris and labels. |
||
| 909 | */ |
||
| 910 | public function hierarchy($request) |
||
| 984 | } |
||
| 985 | |||
| 986 | /** |
||
| 987 | * Used for querying group hierarchy for the sidebar group view. |
||
| 988 | * @param Request $request |
||
| 989 | * @return object json-ld wrapped hierarchical concept uris and labels. |
||
| 990 | */ |
||
| 991 | public function groups($request) |
||
| 1005 | } |
||
| 1006 | |||
| 1007 | /** |
||
| 1008 | * Used for querying member relations for a group. |
||
| 1009 | * @param Request $request |
||
| 1010 | * @return object json-ld wrapped narrower concept uris and labels. |
||
| 1011 | */ |
||
| 1012 | public function groupMembers($request) |
||
| 1013 | { |
||
| 1014 | if ($this->notModified($request->getVocab())) { |
||
| 1015 | return null; |
||
| 1016 | } |
||
| 1017 | $children = $request->getVocab()->listConceptGroupContents($request->getUri(), $request->getLang()); |
||
| 1018 | if (empty($children)) { |
||
| 1019 | return $this->returnError('404', 'Not Found', "Could not find group <{$request->getUri()}>"); |
||
| 1020 | } |
||
| 1021 | |||
| 1022 | $ret = array_merge_recursive($this->context, array( |
||
| 1023 | '@context' => array('prefLabel' => 'skos:prefLabel', 'members' => 'skos:member', '@language' => $request->getLang()), |
||
| 1024 | 'uri' => $request->getUri(), |
||
| 1025 | 'members' => $children) |
||
| 1026 | ); |
||
| 1027 | |||
| 1028 | return $this->returnJson($ret); |
||
| 1029 | } |
||
| 1030 | |||
| 1031 | /** |
||
| 1032 | * Used for querying narrower relations for a concept in the hierarchy view. |
||
| 1033 | * @param Request $request |
||
| 1034 | * @return object json-ld wrapped narrower concept uris and labels. |
||
| 1035 | */ |
||
| 1036 | public function children($request) |
||
| 1037 | { |
||
| 1038 | if ($this->notModified($request->getVocab())) { |
||
| 1039 | return null; |
||
| 1040 | } |
||
| 1041 | $children = $request->getVocab()->getConceptChildren($request->getUri(), $request->getLang()); |
||
| 1042 | if ($children === null) { |
||
| 1043 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 1044 | } |
||
| 1045 | |||
| 1046 | $ret = array_merge_recursive($this->context, array( |
||
| 1047 | '@context' => array('prefLabel' => 'skos:prefLabel', 'narrower' => 'skos:narrower', 'notation' => 'skos:notation', 'hasChildren' => 'onki:hasChildren', '@language' => $request->getLang()), |
||
| 1048 | 'uri' => $request->getUri(), |
||
| 1049 | 'narrower' => $children) |
||
| 1050 | ); |
||
| 1051 | |||
| 1052 | return $this->returnJson($ret); |
||
| 1053 | } |
||
| 1054 | |||
| 1055 | /** |
||
| 1056 | * Used for querying narrower relations for a concept in the hierarchy view. |
||
| 1057 | * @param Request $request |
||
| 1058 | * @return object json-ld wrapped hierarchical concept uris and labels. |
||
| 1059 | */ |
||
| 1060 | public function related($request) |
||
| 1061 | { |
||
| 1062 | if ($this->notModified($request->getVocab())) { |
||
| 1063 | return null; |
||
| 1064 | } |
||
| 1065 | $related = $request->getVocab()->getConceptRelateds($request->getUri(), $request->getLang()); |
||
| 1066 | if ($related === null) { |
||
| 1067 | return $this->returnError('404', 'Not Found', "Could not find concept <{$request->getUri()}>"); |
||
| 1068 | } |
||
| 1069 | $ret = $this->transformPropertyResults($request->getUri(), $request->getLang(), $related, "related", "skos:related"); |
||
| 1070 | return $this->returnJson($ret); |
||
| 1071 | } |
||
| 1072 | |||
| 1073 | /** |
||
| 1074 | * Used for querying new concepts in the vocabulary |
||
| 1075 | * @param Request $request |
||
| 1076 | * @return object json-ld wrapped list of changed concepts |
||
| 1077 | */ |
||
| 1078 | public function newConcepts($request) |
||
| 1079 | { |
||
| 1080 | $offset = ($request->getQueryParam('offset') && is_numeric($request->getQueryParam('offset')) && $request->getQueryParam('offset') >= 0) ? $request->getQueryParam('offset') : 0; |
||
| 1081 | $limit = ($request->getQueryParam('limit') && is_numeric($request->getQueryParam('limit')) && $request->getQueryParam('limit') >= 0) ? $request->getQueryParam('limit') : 200; |
||
| 1082 | |||
| 1083 | return $this->changedConcepts($request, 'dc:created', $offset, $limit); |
||
| 1084 | } |
||
| 1085 | |||
| 1086 | /** |
||
| 1087 | * Used for querying modified concepts in the vocabulary |
||
| 1088 | * @param Request $request |
||
| 1089 | * @return object json-ld wrapped list of changed concepts |
||
| 1090 | */ |
||
| 1091 | public function modifiedConcepts($request) |
||
| 1092 | { |
||
| 1093 | $offset = ($request->getQueryParam('offset') && is_numeric($request->getQueryParam('offset')) && $request->getQueryParam('offset') >= 0) ? $request->getQueryParam('offset') : 0; |
||
| 1094 | $limit = ($request->getQueryParam('limit') && is_numeric($request->getQueryParam('limit')) && $request->getQueryParam('limit') >= 0) ? $request->getQueryParam('limit') : 200; |
||
| 1095 | |||
| 1096 | return $this->changedConcepts($request, 'dc:modified', $offset, $limit); |
||
| 1097 | } |
||
| 1098 | |||
| 1099 | /** |
||
| 1100 | * Used for querying changed concepts in the vocabulary |
||
| 1101 | * @param Request $request |
||
| 1102 | * @param int $offset starting index offset |
||
| 1103 | * @param int $limit maximum number of concepts to return |
||
| 1104 | * @return object json-ld wrapped list of changed concepts |
||
| 1105 | */ |
||
| 1106 | private function changedConcepts($request, $prop, $offset, $limit) |
||
| 1125 | |||
| 1126 | } |
||
| 1127 | } |
||
| 1128 |
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The issue could also be caused by a filter entry in the build configuration. If the path has been excluded in your configuration, e.g.
excluded_paths: ["lib/*"], you can move it to the dependency path list as follows:For further information see https://scrutinizer-ci.com/docs/tools/php/php-scrutinizer/#list-dependency-paths