| 1 |  |  | """Vocabulary management functionality for Annif""" | 
            
                                                        
            
                                    
            
            
                | 2 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 3 |  |  | import os.path | 
            
                                                        
            
                                    
            
            
                | 4 |  |  | import annif | 
            
                                                        
            
                                    
            
            
                | 5 |  |  | import annif.corpus | 
            
                                                        
            
                                    
            
            
                | 6 |  |  | import annif.util | 
            
                                                        
            
                                    
            
            
                | 7 |  |  | from annif.datadir import DatadirMixin | 
            
                                                        
            
                                    
            
            
                | 8 |  |  | from annif.exception import NotInitializedException | 
            
                                                        
            
                                    
            
            
                | 9 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 10 |  |  | logger = annif.logger | 
            
                                                        
            
                                    
            
            
                | 11 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 12 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 13 |  |  | class AnnifVocabulary(DatadirMixin): | 
            
                                                        
            
                                    
            
            
                | 14 |  |  |     """Class representing a subject vocabulary which can be used by multiple | 
            
                                                        
            
                                    
            
            
                | 15 |  |  |     Annif projects.""" | 
            
                                                        
            
                                    
            
            
                | 16 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 17 |  |  |     # defaults for uninitialized instances | 
            
                                                        
            
                                    
            
            
                | 18 |  |  |     _subjects = None | 
            
                                                        
            
                                    
            
            
                | 19 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 20 |  |  |     def __init__(self, vocab_id, datadir, language): | 
            
                                                        
            
                                    
            
            
                | 21 |  |  |         DatadirMixin.__init__(self, datadir, 'vocabs', vocab_id) | 
            
                                                        
            
                                    
            
            
                | 22 |  |  |         self.vocab_id = vocab_id | 
            
                                                        
            
                                    
            
            
                | 23 |  |  |         self.language = language | 
            
                                                        
            
                                    
            
            
                | 24 |  |  |         self._skos_vocab = None | 
            
                                                        
            
                                    
            
            
                | 25 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 26 |  |  |     def _create_subject_index(self, subject_corpus): | 
            
                                                        
            
                                    
            
            
                | 27 |  |  |         self._subjects = annif.corpus.SubjectIndex(subject_corpus) | 
            
                                                        
            
                                    
            
            
                | 28 |  |  |         annif.util.atomic_save(self._subjects, self.datadir, 'subjects') | 
            
                                                        
            
                                    
            
            
                | 29 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 30 |  |  |     def _update_subject_index(self, subject_corpus): | 
            
                                                        
            
                                    
            
            
                | 31 |  |  |         old_subjects = self.subjects | 
            
                                                        
            
                                    
            
            
                | 32 |  |  |         new_subjects = annif.corpus.SubjectIndex(subject_corpus) | 
            
                                                        
            
                                    
            
            
                | 33 |  |  |         updated_subjects = annif.corpus.SubjectIndex() | 
            
                                                        
            
                                    
            
            
                | 34 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 35 |  |  |         for uri, label, notation in old_subjects: | 
            
                                                        
            
                                    
            
            
                | 36 |  |  |             if new_subjects.contains_uri(uri): | 
            
                                                        
            
                                    
            
            
                | 37 |  |  |                 label, notation = new_subjects[new_subjects.by_uri(uri)][1:3] | 
            
                                                        
            
                                    
            
            
                | 38 |  |  |             else:  # subject removed from new corpus | 
            
                                                        
            
                                    
            
            
                | 39 |  |  |                 label, notation = None, None | 
            
                                                        
            
                                    
            
            
                | 40 |  |  |             updated_subjects.append(uri, label, notation) | 
            
                                                        
            
                                    
            
            
                | 41 |  |  |         for uri, label, notation in new_subjects: | 
            
                                                        
            
                                    
            
            
                | 42 |  |  |             if not old_subjects.contains_uri(uri): | 
            
                                                        
            
                                    
            
            
                | 43 |  |  |                 updated_subjects.append(uri, label, notation) | 
            
                                                        
            
                                    
            
            
                | 44 |  |  |         self._subjects = updated_subjects | 
            
                                                        
            
                                    
            
            
                | 45 |  |  |         annif.util.atomic_save(self._subjects, self.datadir, 'subjects') | 
            
                                                        
            
                                    
            
            
                | 46 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 47 |  |  |     @property | 
            
                                                        
            
                                    
            
            
                | 48 |  |  |     def subjects(self): | 
            
                                                        
            
                                    
            
            
                | 49 |  |  |         if self._subjects is None: | 
            
                                                        
            
                                    
            
            
                | 50 |  |  |             path = os.path.join(self.datadir, 'subjects') | 
            
                                                        
            
                                    
            
            
                | 51 |  |  |             if os.path.exists(path): | 
            
                                                        
            
                                    
            
            
                | 52 |  |  |                 logger.debug('loading subjects from %s', path) | 
            
                                                        
            
                                    
            
            
                | 53 |  |  |                 self._subjects = annif.corpus.SubjectIndex.load(path) | 
            
                                                        
            
                                    
            
            
                | 54 |  |  |             else: | 
            
                                                        
            
                                    
            
            
                | 55 |  |  |                 raise NotInitializedException( | 
            
                                                        
            
                                    
            
            
                | 56 |  |  |                     "subject file {} not found".format(path)) | 
            
                                                        
            
                                    
            
            
                | 57 |  |  |         return self._subjects | 
            
                                                        
            
                                    
            
            
                | 58 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 59 |  |  |     @property | 
            
                                                        
            
                                    
            
            
                | 60 |  |  |     def skos(self): | 
            
                                                        
            
                                    
            
            
                | 61 |  |  |         """return the subject vocabulary from SKOS file""" | 
            
                                                        
            
                                    
            
            
                | 62 |  |  |         if self._skos_vocab is None: | 
            
                                                        
            
                                    
            
            
                | 63 |  |  |             path = os.path.join(self.datadir, 'subjects.ttl') | 
            
                                                        
            
                                    
            
            
                | 64 |  |  |             if os.path.exists(path): | 
            
                                                        
            
                                    
            
            
                | 65 |  |  |                 logger.debug(f'loading graph from {path}') | 
            
                                                        
            
                                    
            
            
                | 66 |  |  |                 self._skos_vocab = annif.corpus.SubjectFileSKOS(path, | 
            
                                                        
            
                                    
            
            
                | 67 |  |  |                                                                 self.language) | 
            
                                                        
            
                                    
            
            
                | 68 |  |  |             else: | 
            
                                                        
            
                                    
            
            
                | 69 |  |  |                 raise NotInitializedException(f'graph file {path} not found') | 
            
                                                        
            
                                    
            
            
                | 70 |  |  |         return self._skos_vocab | 
            
                                                        
            
                                    
            
            
                | 71 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 72 |  |  |     def load_vocabulary(self, subject_corpus, language): | 
            
                                                        
            
                                    
            
            
                | 73 |  |  |         """load subjects from a subject corpus and save them into a | 
            
                                                        
            
                                    
            
            
                | 74 |  |  |         SKOS/Turtle file for later use""" | 
            
                                                        
            
                                    
            
            
                | 75 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 76 |  |  |         if os.path.exists(os.path.join(self.datadir, 'subjects')): | 
            
                                                        
            
                                    
            
            
                | 77 |  |  |             logger.info('updating existing vocabulary') | 
            
                                                        
            
                                    
            
            
                | 78 |  |  |             self._update_subject_index(subject_corpus) | 
            
                                                        
            
                                    
            
            
                | 79 |  |  |         else: | 
            
                                                        
            
                                    
            
            
                | 80 |  |  |             self._create_subject_index(subject_corpus) | 
            
                                                        
            
                                    
            
            
                | 81 |  |  |         subject_corpus.save_skos(os.path.join(self.datadir, 'subjects.ttl'), | 
            
                                                        
            
                                    
            
            
                | 82 |  |  |                                  language) | 
            
                                                        
            
                                    
            
            
                | 83 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 84 |  |  |     def as_skos_file(self): | 
            
                                                        
            
                                    
            
            
                | 85 |  |  |         """return the vocabulary as a file object, in SKOS/Turtle syntax""" | 
            
                                                        
            
                                    
            
            
                | 86 |  |  |         return open(os.path.join(self.datadir, 'subjects.ttl'), 'rb') | 
            
                                                        
            
                                    
            
            
                | 87 |  |  |  | 
            
                                                        
            
                                    
            
            
                | 88 |  |  |     def as_graph(self): | 
            
                                                        
            
                                    
            
            
                | 89 |  |  |         """return the vocabulary as an rdflib graph""" | 
            
                                                        
            
                                    
            
            
                | 90 |  |  |         return self.skos.graph | 
            
                                                        
            
                                    
            
            
                | 91 |  |  |  |