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<?php |
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// This file is part of BOINC. |
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// https://boinc.berkeley.edu |
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// Copyright (C) 2024 University of California |
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// |
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// BOINC is free software; you can redistribute it and/or modify it |
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// under the terms of the GNU Lesser General Public License |
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// as published by the Free Software Foundation, |
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// either version 3 of the License, or (at your option) any later version. |
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// |
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// BOINC is distributed in the hope that it will be useful, |
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// but WITHOUT ANY WARRANTY; without even the implied warranty of |
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// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. |
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// See the GNU Lesser General Public License for more details. |
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// |
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// You should have received a copy of the GNU Lesser General Public License |
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// along with BOINC. If not, see <http://www.gnu.org/licenses/>. |
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// web interface for submitting BUDA jobs |
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require_once('../inc/util.inc'); |
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require_once('../inc/submit_util.inc'); |
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require_once('../inc/sandbox.inc'); |
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display_errors(); |
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function submit_form($user) { |
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$sbitems_zip = sandbox_select_items($user, '/.zip$/'); |
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if (!$sbitems_zip) { |
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error_page("No .zip files in your sandbox."); |
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} |
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$app = get_str('app'); |
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if (!is_valid_filename($app)) die('bad arg'); |
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$variant = get_str('variant'); |
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if (!is_valid_filename($variant)) die('bad arg'); |
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$desc = "<br><small> |
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A zipped directory with one subdirectory per job, |
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containing the input file(s) for that job |
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and an optional file <code>cmdline</code> |
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containing command-line arguments. |
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See <a href=https://github.com/BOINC/boinc/wiki/Docker-apps>more details</a></small>. |
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"; |
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page_head("Submit jobs to $app ($variant)"); |
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form_start('buda_submit.php'); |
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form_input_hidden('action', 'submit'); |
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form_input_hidden('app', $app); |
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form_input_hidden('variant', $variant); |
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form_select("Batch zip file $desc", 'batch_file', $sbitems_zip); |
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form_submit('OK'); |
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form_end(); |
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page_tail(); |
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} |
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// unzip batch file into a temp dir; return dir name |
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// |
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function unzip_batch_file($user, $batch_file) { |
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@mkdir("../../buda_batches"); |
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for ($i=0; $i<1000; $i++) { |
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$batch_dir = "../../buda_batches/$i"; |
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$batch_dir_name = $i; |
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$ret = @mkdir($batch_dir); |
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if ($ret) break; |
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} |
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if (!$ret) error_page("can't create batch dir"); |
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$sb_dir = sandbox_dir($user); |
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if (!file_exists("$sb_dir/$batch_file")) { |
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error_page("no batch file $batch_file"); |
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} |
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system("cd $batch_dir; unzip $sb_dir/$batch_file > /dev/null", $ret); |
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if ($ret) { |
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error_page("unzip error: $ret"); |
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} |
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return $batch_dir_name; |
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} |
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// check validity of batch dir. |
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// top level should have only infiles (shared) |
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// job dirs should have only remaining infiles and possibly cmdline |
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// |
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// return struct describing the batch, and the md5/size of files |
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// |
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function parse_batch_dir($batch_dir, $variant_desc) { |
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$input_files = $variant_desc->input_file_names; |
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sort($input_files); |
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$shared_files = []; |
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$shared_file_infos = []; |
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if (is_dir("$batch_dir/shared_input_files")) { |
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foreach (scandir("$batch_dir/shared_input_files") as $fname) { |
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if ($fname[0] == '.') continue; |
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if (!in_array($fname, $input_files)) { |
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error_page("$fname is not an input file name"); |
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} |
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$shared_files[] = $fname; |
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$shared_file_infos[] = get_file_info("$batch_dir/shared_input_files/$fname"); |
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} |
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} |
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$unshared_files = array_diff($input_files, $shared_files); |
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sort($unshared_files); |
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$jobs = []; |
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foreach (scandir($batch_dir) as $fname) { |
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if ($fname[0] == '.') continue; |
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if ($fname == 'shared_input_files') continue; |
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if (!is_dir("$batch_dir/$fname")) { |
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error_page("$batch_dir/$fname is not a directory"); |
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} |
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$job_files = []; |
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$cmdline = ''; |
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foreach(scandir("$batch_dir/$fname") as $f2) { |
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if ($f2[0] == '.') continue; |
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if ($f2 == 'cmdline') { |
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$cmdline = file_get_contents("$batch_dir/$f2"); |
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} |
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if (!in_array($f2, $unshared_files)) { |
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error_page("$fname/$f2 is not an input file name"); |
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} |
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$job_files[] = $f2; |
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} |
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if (sort($job_files) != $unshared_files) { |
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error_page("$fname doesn't have all input files"); |
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} |
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$file_infos = []; |
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foreach ($unshared_files as $f2) { |
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$file_infos[] = get_file_info("$batch_dir/$fname/$f2"); |
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} |
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$job = new StdClass; |
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$job->dir = $fname; |
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$job->cmdline = $cmdline; |
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$job->file_infos = $file_infos; |
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$jobs[] = $job; |
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} |
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$batch_desc = new StdClass; |
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$batch_desc->shared_files = $shared_files; |
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$batch_desc->shared_file_infos = $shared_file_infos; |
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$batch_desc->unshared_files = $unshared_files; |
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$batch_desc->jobs = $jobs; |
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return $batch_desc; |
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} |
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function create_batch($user, $njobs, $boinc_app, $app, $variant) { |
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$now = time(); |
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$batch_name = sprintf('buda_%d_%d', $user->id, $now); |
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$description = "$app ($variant)"; |
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$batch_id = BoincBatch::insert(sprintf( |
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"(user_id, create_time, logical_start_time, logical_end_time, est_completion_time, njobs, fraction_done, nerror_jobs, state, completion_time, credit_estimate, credit_canonical, credit_total, name, app_id, project_state, description, expire_time) values (%d, %d, 0, 0, 0, %d, 0, 0, %d, 0, 0, 0, 0, '%s', %d, 0, '%s', 0)", |
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$user->id, $now, $njobs, BATCH_STATE_INIT, $batch_name, $boinc_app->id, |
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$description |
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)); |
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return BoincBatch::lookup_id($batch_id); |
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} |
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function stage_input_files($batch_dir, $batch_desc, $batch_id) { |
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$n = count($batch_desc->shared_files); |
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$batch_desc->shared_files_phys_names = []; |
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for ($i=0; $i<$n; $i++) { |
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$path = sprintf('%s/%s', $batch_dir, $batch_desc->shared_files[$i]); |
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[$md5, $size] = $batch_desc->shared_file_infos[$i]; |
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$phys_name = sprintf('batch_%d_%s', $batch_id, $md5); |
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stage_file_aux($path, $md5, $size, $phys_name); |
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$batch_desc->shared_files_phys_names[] = $phys_name; |
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} |
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foreach ($batch_desc->jobs as $job) { |
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$n = count($batch_desc->unshared_files); |
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$job->phys_names = []; |
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for ($i=0; $i<$n; $i++) { |
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$path = sprintf('%s/%s/%s', |
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$batch_dir, $job->dir, $batch_desc->unshared_files[$i] |
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); |
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[$md5, $size] = $job->file_infos[$i]; |
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$phys_name = sprintf('batch_%d_%s', $batch_id, $md5); |
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stage_file_aux($path, $md5, $size, $phys_name); |
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$job->phys_names[] = $phys_name; |
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} |
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} |
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} |
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function create_jobs( |
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$variant_desc, $batch_desc, $batch_id, $boinc_app, $batch_dir_name |
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) { |
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// get list of names of app files |
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// |
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$app_file_names = $variant_desc->dockerfile_phys; |
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foreach ($variant_desc->app_files_phys as $pname) { |
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$app_file_names .= " $pname"; |
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} |
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$job_cmds = ''; |
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foreach ($batch_desc->jobs as $job) { |
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$job_cmd = sprintf('--wu_name batch_%d__job_%s', $batch_id, $job->dir); |
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if ($job->cmdline) { |
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$job_cmd .= sprintf(' --command_line "%s"', $job->cmdline); |
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} |
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$job_cmd .= " $app_file_names"; |
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foreach ($batch_desc->shared_files_phys_names as $x) { |
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$job_cmd .= " $x"; |
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} |
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foreach ($job->phys_names as $x) { |
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$job_cmd .= " $x"; |
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} |
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$job_cmds .= "$job_cmd\n"; |
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} |
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$cmd = sprintf( |
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'cd ../..; bin/create_work --appname %s --batch %d --stdin --command_line "--dockerfile %s --verbose" --wu_template %s --result_template %s', |
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$boinc_app->name, $batch_id, $variant_desc->dockerfile, |
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"buda_batches/$batch_dir_name/template_in", |
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"buda_batches/$batch_dir_name/template_out" |
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); |
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$cmd .= sprintf(' > %s 2<&1', "buda_batches/errfile"); |
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$h = popen($cmd, "w"); |
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if (!$h) error_page('create_work launch failed'); |
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fwrite($h, $job_cmds); |
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$ret = pclose($h); |
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if ($ret) { |
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echo $cmd; |
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echo "\n\n"; |
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echo $job_cmds; |
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echo "\n\n"; |
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readfile("../../buda_batches/errfile"); |
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exit; |
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error_page("create_work failed: $x"); |
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} |
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} |
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///////////////// TEMPLATE CREATION ////////////// |
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function file_ref_in($fname) { |
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return(sprintf( |
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' <file_ref> |
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<open_name>%s</open_name> |
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<copy_file/> |
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</file_ref> |
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', |
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$fname |
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)); |
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} |
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function file_info_out($i) { |
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return sprintf( |
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' <file_info> |
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<name><OUTFILE_%d/></name> |
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<generated_locally/> |
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<upload_when_present/> |
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<max_nbytes>5000000</max_nbytes> |
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<url><UPLOAD_URL/></url> |
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</file_info> |
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', |
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$i |
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); |
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} |
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function file_ref_out($i, $fname) { |
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return sprintf( |
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' <file_ref> |
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<file_name><OUTFILE_%d/></file_name> |
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<open_name>%s</open_name> |
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<copy_file/> |
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</file_ref> |
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', $i, $fname |
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); |
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} |
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// create templates and put them in batch dir |
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// |
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264
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function create_templates($variant_desc, $batch_dir) { |
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// input template |
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// |
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$x = "<input_template>\n"; |
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$ninfiles = 1 + count($variant_desc->input_file_names) + count($variant_desc->app_files); |
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for ($i=0; $i<$ninfiles; $i++) { |
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$x .= " <file_info>\n <no_delete/>\n </file_info>\n"; |
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} |
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$x .= " <workunit>\n"; |
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$x .= file_ref_in($variant_desc->dockerfile); |
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foreach ($variant_desc->app_files as $fname) { |
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$x .= file_ref_in($fname); |
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} |
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foreach ($variant_desc->input_file_names as $fname) { |
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$x .= file_ref_in($fname); |
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} |
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$x .= " </workunit>\n<input_template>\n"; |
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file_put_contents("$batch_dir/template_in", $x); |
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283
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// output template |
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284
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// |
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285
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$x = "<output_template>\n"; |
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$i = 0; |
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287
|
|
|
foreach ($variant_desc->output_file_names as $fname) { |
|
288
|
|
|
$x .= file_info_out($i++); |
|
289
|
|
|
} |
|
290
|
|
|
$x .= " <result>\n"; |
|
291
|
|
|
$i = 0; |
|
292
|
|
|
foreach ($variant_desc->output_file_names as $fname) { |
|
293
|
|
|
$x .= file_ref_out($i++, $fname); |
|
294
|
|
|
} |
|
295
|
|
|
$x .= " </result>\n</output_template>\n"; |
|
296
|
|
|
file_put_contents("$batch_dir/template_out", $x); |
|
297
|
|
|
} |
|
298
|
|
|
|
|
299
|
|
|
function handle_submit($user) { |
|
300
|
|
|
$boinc_app = BoincApp::lookup("name='buda'"); |
|
301
|
|
|
if (!$boinc_app) { |
|
302
|
|
|
error_page("No buda app found"); |
|
303
|
|
|
} |
|
304
|
|
|
$app = get_str('app'); |
|
305
|
|
|
if (!is_valid_filename($app)) die('bad arg'); |
|
|
|
|
|
|
306
|
|
|
$variant = get_str('variant'); |
|
307
|
|
|
if (!is_valid_filename($variant)) die('bad arg'); |
|
|
|
|
|
|
308
|
|
|
$batch_file = get_str('batch_file'); |
|
309
|
|
|
if (!is_valid_filename($batch_file)) die('bad arg'); |
|
|
|
|
|
|
310
|
|
|
|
|
311
|
|
|
$variant_dir = "../../buda_apps/$app/$variant"; |
|
312
|
|
|
$variant_desc = json_decode( |
|
313
|
|
|
file_get_contents("$variant_dir/variant.json") |
|
314
|
|
|
); |
|
315
|
|
|
|
|
316
|
|
|
// unzip batch file into temp dir |
|
317
|
|
|
$batch_dir_name = unzip_batch_file($user, $batch_file); |
|
318
|
|
|
$batch_dir = "../../buda_batches/$batch_dir_name"; |
|
319
|
|
|
|
|
320
|
|
|
// scan batch dir; validate and return struct |
|
321
|
|
|
$batch_desc = parse_batch_dir($batch_dir, $variant_desc); |
|
322
|
|
|
|
|
323
|
|
|
create_templates($variant_desc, $batch_dir); |
|
324
|
|
|
|
|
325
|
|
|
$batch = create_batch( |
|
326
|
|
|
$user, count($batch_desc->jobs), $boinc_app, $app, $variant |
|
327
|
|
|
); |
|
328
|
|
|
|
|
329
|
|
|
// stage input files and record the physical names |
|
330
|
|
|
// |
|
331
|
|
|
stage_input_files($batch_dir, $batch_desc, $batch->id); |
|
332
|
|
|
|
|
333
|
|
|
create_jobs( |
|
334
|
|
|
$variant_desc, $batch_desc, $batch->id, $boinc_app, $batch_dir_name |
|
335
|
|
|
); |
|
336
|
|
|
|
|
337
|
|
|
// mark batch as in progress |
|
338
|
|
|
// |
|
339
|
|
|
$batch->update(sprintf('state=%d', BATCH_STATE_IN_PROGRESS)); |
|
340
|
|
|
|
|
341
|
|
|
// clean up batch dir |
|
342
|
|
|
// |
|
343
|
|
|
//system("rm -rf $batch_dir"); |
|
344
|
|
|
|
|
345
|
|
|
header("Location: submit.php?action=query_batch&batch_id=$batch->id"); |
|
346
|
|
|
} |
|
347
|
|
|
|
|
348
|
|
|
$user = get_logged_in_user(); |
|
|
|
|
|
|
349
|
|
|
$action = get_str('action', true); |
|
350
|
|
|
if ($action == 'submit') { |
|
351
|
|
|
handle_submit($user); |
|
352
|
|
|
} else { |
|
353
|
|
|
submit_form($user); |
|
354
|
|
|
} |
|
355
|
|
|
|
|
356
|
|
|
?> |
|
357
|
|
|
|
BOINC /
boinc
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In general, usage of exit should be done with care and only when running in a scripting context like a CLI script.